Query gi|254780369|ref|YP_003064782.1| Electron transfer flavoprotein alpha subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 318
No_of_seqs 153 out of 2019
Neff 7.5
Searched_HMMs 23785
Date Mon May 30 09:30:03 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780369.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efv_A Electron transfer flavo 100.0 0 0 695.1 33.1 309 6-318 2-312 (315)
2 1o97_D Electron transferring f 100.0 0 0 685.1 30.8 306 7-318 2-318 (320)
3 1efp_A ETF, protein (electron 100.0 0 0 682.4 32.2 306 7-318 1-307 (307)
4 3ih5_A Electron transfer flavo 100.0 1.7E-35 7E-40 244.7 15.2 188 4-192 1-212 (217)
5 3fet_A Electron transfer flavo 99.9 2.4E-26 1E-30 186.4 14.3 153 5-177 3-158 (166)
6 1efv_B Electron transfer flavo 99.0 1.6E-07 6.7E-12 66.6 18.4 184 4-191 2-229 (255)
7 1o97_C Electron transferring f 98.8 4.5E-07 1.9E-11 63.8 14.9 140 18-160 34-190 (264)
8 1efp_B ETF, protein (electron 98.6 1.6E-06 6.6E-11 60.3 13.6 154 18-175 34-209 (252)
9 3glr_A NAD-dependent deacetyla 96.1 0.0058 2.4E-07 37.6 4.6 59 260-318 198-263 (285)
10 1yc5_A NAD-dependent deacetyla 96.1 0.0058 2.4E-07 37.6 4.5 58 260-318 181-243 (246)
11 1s5p_A NAD-dependent deacetyla 95.9 0.011 4.6E-07 35.9 5.3 59 259-318 167-230 (235)
12 1ma3_A SIR2-AF2, transcription 95.9 0.01 4.2E-07 36.1 5.0 59 259-318 183-246 (253)
13 1t9b_A Acetolactate synthase, 95.7 0.09 3.8E-06 30.0 9.2 115 203-318 292-428 (677)
14 2b4y_A NAD-dependent deacetyla 95.7 0.02 8.3E-07 34.2 5.7 56 260-316 211-271 (271)
15 2ez9_A Pyruvate oxidase; TPP e 95.5 0.083 3.5E-06 30.3 8.5 283 28-318 19-337 (603)
16 2pgn_A Cyclohexane-1,2-dione h 95.5 0.033 1.4E-06 32.8 6.5 285 26-318 10-333 (589)
17 1q14_A HST2 protein; histone d 95.1 0.017 7.3E-07 34.6 3.8 62 256-318 216-285 (361)
18 1m2k_A Silent information regu 95.1 0.034 1.4E-06 32.7 5.3 59 259-318 177-240 (249)
19 2hjh_A NAD-dependent histone d 95.0 0.043 1.8E-06 32.1 5.6 57 260-318 256-316 (354)
20 1q1a_A HST2 protein; ternary c 94.9 0.028 1.2E-06 33.3 4.5 65 254-318 206-277 (289)
21 3k35_A Mono-ADP-ribosyltransfe 94.7 0.059 2.5E-06 31.2 5.7 58 260-318 207-269 (318)
22 2c31_A Oxalyl-COA decarboxylas 94.6 0.05 2.1E-06 31.7 5.2 117 199-318 210-337 (568)
23 2q28_A Oxalyl-COA decarboxylas 94.3 0.064 2.7E-06 31.0 5.1 119 199-318 208-333 (564)
24 2ixd_A LMBE-related protein; h 93.9 0.14 5.9E-06 28.8 6.2 93 5-98 3-107 (242)
25 2pan_A Glyoxylate carboligase; 93.5 0.077 3.2E-06 30.5 4.4 115 199-317 223-355 (616)
26 1ybh_A Acetolactate synthase, 92.5 0.54 2.3E-05 25.1 7.7 289 17-318 9-341 (590)
27 2iht_A Carboxyethylarginine sy 92.2 0.28 1.2E-05 26.9 5.8 119 199-318 213-350 (573)
28 3cf4_G Acetyl-COA decarbonylas 91.8 0.1 4.3E-06 29.7 3.2 116 199-318 31-170 (170)
29 1uan_A Hypothetical protein TT 91.8 0.34 1.4E-05 26.4 5.8 92 6-98 2-105 (227)
30 3lq1_A 2-succinyl-5-enolpyruvy 91.4 0.72 3E-05 24.3 7.3 118 199-318 221-352 (578)
31 1j8f_A SIRT2, sirtuin 2, isofo 91.2 0.43 1.8E-05 25.7 5.8 60 259-318 220-302 (323)
32 1v5e_A Pyruvate oxidase; oxido 89.1 1.1 4.8E-05 23.0 7.3 117 199-318 202-330 (590)
33 2uz1_A Benzaldehyde lyase; thi 88.8 0.81 3.4E-05 24.0 5.6 111 203-317 206-332 (563)
34 3jwp_A Transcriptional regulat 87.3 0.62 2.6E-05 24.7 4.2 52 260-312 192-249 (265)
35 1ytl_A Acetyl-COA decarbonylas 84.6 1.1 4.8E-05 23.0 4.5 112 199-318 32-174 (174)
36 1q6z_A BFD, BFDC, benzoylforma 81.7 0.68 2.9E-05 24.4 2.4 116 199-317 197-328 (528)
37 3eya_A Pyruvate dehydrogenase 79.3 3.1 0.00013 20.3 7.5 112 202-318 202-323 (549)
38 2wvg_A PDC, pyruvate decarboxy 79.1 3.2 0.00013 20.2 5.4 114 199-318 206-335 (568)
39 2hy5_B Intracellular sulfur ox 61.8 7.7 0.00032 17.7 4.2 41 7-47 7-49 (136)
40 3fxa_A SIS domain protein; YP_ 55.7 9.8 0.00041 17.1 4.1 55 248-303 81-141 (201)
41 2vk8_A Pyruvate decarboxylase 55.5 3.7 0.00015 19.8 1.4 116 199-317 208-340 (563)
42 1ozh_A ALS, acetolactate synth 53.4 11 0.00045 16.9 16.3 288 22-318 13-335 (566)
43 2poc_A D-fructose-6-, isomeras 48.1 9.6 0.0004 17.1 2.5 27 198-229 218-244 (367)
44 2x7j_A 2-succinyl-5-enolpyruvy 47.2 13 0.00056 16.2 7.7 118 199-318 240-372 (604)
45 1ovm_A Indole-3-pyruvate decar 41.5 15 0.00063 15.9 2.7 113 203-316 211-337 (552)
46 3a06_A 1-deoxy-D-xylulose 5-ph 39.2 18 0.00074 15.5 4.1 92 14-109 10-105 (376)
47 3dff_A Teicoplanin pseudoaglyc 38.1 18 0.00077 15.4 5.9 36 7-43 9-44 (273)
48 1coz_A Protein (glycerol-3-pho 37.4 19 0.00079 15.3 8.2 37 6-44 1-38 (129)
49 2b7l_A Glycerol-3-phosphate cy 33.4 22 0.00091 14.9 8.3 85 6-101 1-98 (132)
50 1kjq_A GART 2, phosphoribosylg 26.2 29 0.0012 14.1 4.2 31 7-43 13-43 (391)
51 2pbz_A Hypothetical protein; N 26.1 29 0.0012 14.1 8.3 120 5-136 2-137 (320)
52 3etn_A Putative phosphosugar i 26.0 29 0.0012 14.1 4.5 59 246-304 93-158 (220)
53 3ic3_A Putative pyruvate dehyd 25.1 30 0.0013 14.0 2.7 26 203-228 34-59 (101)
54 3m6y_A 4-hydroxy-2-oxoglutarat 22.0 35 0.0015 13.6 2.0 116 34-156 34-157 (275)
No 1
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00 E-value=0 Score=695.06 Aligned_cols=309 Identities=41% Similarity=0.702 Sum_probs=286.1
Q ss_pred EEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 34899998029758789999999998738934799981892688899870789739999448101000123224557874
Q gi|254780369|r 6 MPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSI 85 (318)
Q Consensus 6 M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~ 85 (318)
|++|||+||+||+|++.|+|++++||+||++++++++|.+.+..+.++++++|+|+||.++++.|..|.++.|+++++++
T Consensus 2 ~s~LV~aE~~~g~l~~~s~Ell~~A~~Lg~~v~avv~G~~~~~~a~~l~~~~Gad~V~~~~~~~~~~~~~e~~a~al~~~ 81 (315)
T 1efv_A 2 QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILAT 81 (315)
T ss_dssp CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred CEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 41899999479999999999999999858974899988880899999851369878999458202035603457899888
Q ss_pred CC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 03--4560441578103446788887517741013202246872797410695268999779842799516864333355
Q gi|254780369|r 86 AR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKA 163 (318)
Q Consensus 86 ~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~ 163 (318)
++ +|++||+|+|++||||+||||+||++++++||++++.+..++||+|+|+.++++++...++++|+|+++|++.+..
T Consensus 82 ~~~~~p~~VL~~~T~~GrdlaprLAarL~~g~vsdv~~l~~~~~~~r~~~~g~~~~~~~~~~~~~~~tvr~~~f~~~~~~ 161 (315)
T 1efv_A 82 QKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATS 161 (315)
T ss_dssp HHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCSS
T ss_pred HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCC
T ss_conf 75148548996377436678999999809971516899945995999997453179996247614887415643454455
Q ss_pred CCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCC
Q ss_conf 66666156211102445302588544431456667000745641367777833568899999876398597425788678
Q gi|254780369|r 164 EKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAG 243 (318)
Q Consensus 164 ~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~g 243 (318)
......... ... ......+.++.......+++|++|++|||+|||++++||| +++++||++|||++|||||+||+|
T Consensus 162 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~L~~A~vVVs~GrG~~~~e~~-~~~~eLA~~LgaavGaSR~~vD~G 237 (315)
T 1efv_A 162 GGSASSEKA-SST--SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAG 237 (315)
T ss_dssp SCCCEEEEC-CCC--CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTT
T ss_pred CCCCEEEEC-CCC--CCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHH-HHHHHHHHHHCCCEEEEHHHHHCC
T ss_conf 687505750-346--7631101111221123665434415999658755671356-679999998568678712675489
Q ss_pred CCCHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 888889540159754573899996167264555516898899976659988310276457523899999988609
Q gi|254780369|r 244 FAPNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 244 w~p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
|+||++||||||++|+|+||||||||||+||++||++|++||||||||+||||++||||||||+++|||+|+|+|
T Consensus 238 w~p~~~qIGqtG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aD~giVgD~~~vlp~l~e~l 312 (315)
T 1efv_A 238 FVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 312 (315)
T ss_dssp SSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCEEECCCEECCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHHHHH
T ss_conf 998000870687686777699970477088887523598899983899998431289899760999999999998
No 2
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00 E-value=0 Score=685.14 Aligned_cols=306 Identities=24% Similarity=0.380 Sum_probs=274.9
Q ss_pred EEEEEEEECCCEECHHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 489999802975878999999999873----8934799981892688899870789739999448101000123224557
Q gi|254780369|r 7 PVLLLADYNQENLSEQTARIVTAAQKI----SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFV 82 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~~slEll~~A~~l----g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l 82 (318)
|||||+||+||+|++.|||++++||+| +.++.++++|++.++.++++.. ||+|+||.++++.++ |+++.|++++
T Consensus 2 kIlViaE~~~g~l~~~slEll~~A~~La~~~g~~v~avv~G~~~~~~a~~l~~-~Gad~V~~~~~~~l~-~~~~~~a~~l 79 (320)
T 1o97_D 2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSV-NGVDELVVVKGSSID-FDPDVFEASV 79 (320)
T ss_dssp EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGGGGHHHHCB-TTCSEEEEEECSCSS-CCHHHHHHHH
T ss_pred EEEEEEEECCCEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH-CCCCEEEEECCHHHC-CCHHHHHHHH
T ss_conf 79999981599998999999999999887179948999968970999998755-398789996682540-3547799999
Q ss_pred HHHCC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC---CCCEEEEEEECCCEEEEEEECC-CCEEEEECCCC
Q ss_conf 87403--456044157810344678888751774101320224---6872797410695268999779-84279951686
Q gi|254780369|r 83 VSIAR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEII---SPKIFKRPSYTGNIIQTIETTD-TYQIITIRAIA 156 (318)
Q Consensus 83 ~~~~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~---~~~~~~rp~fgG~~~a~v~~~~-~~~viTvr~~s 156 (318)
+++++ +|++||+|+|++||||+||||+||++++++||++++ +..+++||+|+|++++++.++. .|+|+|+||++
T Consensus 80 ~~~i~~~~p~~VL~~~T~~GrdlaprlAarL~~~~vsDv~~l~~~~~~l~~~Rp~~gG~~~a~~~~~~~~~~v~tvr~~~ 159 (320)
T 1o97_D 80 SALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSV 159 (320)
T ss_dssp HHHHHHHCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEECTTCSCEEEEECTTS
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCC
T ss_conf 99998638988999435456774578899848982514021013687379998402532689862488872578864765
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 43333556666615621110244530258854443145666700074564136777783356889999987639859742
Q gi|254780369|r 157 FPPAPKAEKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGAT 236 (318)
Q Consensus 157 f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~S 236 (318)
|++.+. .+...++.+..+....... .....+...+++++|++|++|||+||||+++||| +++++||++|||++|||
T Consensus 160 f~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~A~iVVsgGRG~~~~en~-~l~~eLA~~LgaavGaS 235 (320)
T 1o97_D 160 FKPLEG-AGSPVVSNVDAPSVQSRSQ--NKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNV-EQFRELADEAGATLCCS 235 (320)
T ss_dssp SCCCCS-BCCCEEEEEECCCCCCSEE--EEEEECCC---CCCCSCSSEEEEECGGGCSGGGH-HHHHHHHHHHTCEEEEC
T ss_pred CCCCCC-CCCCCEEEECCCCCCCCCE--EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHH-HHHHHHHHHHCCCEEEC
T ss_conf 444445-7997169833656566624--6678981344444456653699716656772027-89999999839824424
Q ss_pred HHHHHCCCCCHHHHHHCCCCEE-CCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHH
Q ss_conf 5788678888889540159754-573899996167264555516898899976659988310276457523899999988
Q gi|254780369|r 237 RDAVDAGFAPNDWQIGQTGVTV-SPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIE 315 (318)
Q Consensus 237 Rp~vD~gw~p~~~qIG~tG~~v-~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~ 315 (318)
||+||+||+||++|||||||+| +|+||||||||||+|||+||++||+||||||||+||||++||||||||+++|||+|+
T Consensus 236 R~~vD~gw~p~~~qvGqtG~~v~~P~lYia~GISGa~QH~~G~~~s~~IvAIN~D~~ApIf~~adygivgD~~~vlp~l~ 315 (320)
T 1o97_D 236 RPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELK 315 (320)
T ss_dssp HHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCEEECCCCEECCCCEEEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHH
T ss_conf 85876799995656967884725886899994117488887503598899985899998621189889750999999999
Q ss_pred HCC
Q ss_conf 609
Q gi|254780369|r 316 KNL 318 (318)
Q Consensus 316 ~~l 318 (318)
|+|
T Consensus 316 ~~l 318 (320)
T 1o97_D 316 AQL 318 (320)
T ss_dssp HHC
T ss_pred HHH
T ss_conf 986
No 3
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=100.00 E-value=0 Score=682.36 Aligned_cols=306 Identities=45% Similarity=0.787 Sum_probs=281.7
Q ss_pred EEEEEEEECCCEECH-HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 489999802975878-9999999998738934799981892688899870789739999448101000123224557874
Q gi|254780369|r 7 PVLLLADYNQENLSE-QTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSI 85 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~-~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~ 85 (318)
+||||+||+||+|++ +++|++++||+|| +++++++|++.++.++++.+++|+|+||.++++.|.+|.++.|+.++.++
T Consensus 1 sILViaE~~~G~l~~~st~Ell~aAr~lg-dv~alv~G~~~~~~a~~l~~~~GadkV~~~d~~~l~~y~~e~~a~~l~~~ 79 (307)
T 1efp_A 1 AVLLLGEVTNGALNRDATAKAVAAVKALG-DVTVLCAGASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL 79 (307)
T ss_dssp CEEEECCBSSSCBCHHHHHHHHHHHGGGS-CEEEEEEETTCHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred CEEEEEEECCCEECHHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 98999996599988889999999998409-81799988995799999863569878999567200124413689998753
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 03456044157810344678888751774101320224687279741069526899977984279951686433335566
Q gi|254780369|r 86 ARDYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEK 165 (318)
Q Consensus 86 ~~~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~ 165 (318)
+++++++|+|+|++||||+||||+||++++++||++++.+..++|+.|+|+...++.+...++++|+||++|.+.+....
T Consensus 80 ~~~~~~vL~~~T~~GrdlaprlAarl~~gl~ad~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~~f~~~~~~~~ 159 (307)
T 1efp_A 80 AGDYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGT 159 (307)
T ss_dssp HTTCSEEEEESSHHHHHHHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCCCSSCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCC
T ss_conf 03456599814742125778999985788545530785398389999746159999826886079972576666556787
Q ss_pred CCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCC
Q ss_conf 66615621110244530258854443145666700074564136777783356889999987639859742578867888
Q gi|254780369|r 166 VASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFA 245 (318)
Q Consensus 166 ~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~ 245 (318)
...++..... +. ...+.+.....+.++++|++|++|||+|||++++||| +++++||++|||++|||||+||+||+
T Consensus 160 -~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~A~iVVs~GRG~g~~en~-~l~~eLA~~Lga~vgaSR~~vD~gw~ 234 (307)
T 1efp_A 160 -APVTETAAAA-DP--GLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESF-AIIEELADKLGAAVGASRAAVDSGYA 234 (307)
T ss_dssp -CCCBCCCCCC-CC--CSEEEEEEEECCCCSCCTTTCSEEEEECGGGCSSSTT-HHHHHHHHHHTCEEEECHHHHHTTSS
T ss_pred -CCEEEECCCC-CC--CCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHH-HHHHHHHHHHCCCEEECHHHHHCCCC
T ss_conf -6245522346-87--7515788874201345456630899768765565206-89999999869837843778757899
Q ss_pred CHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 8889540159754573899996167264555516898899976659988310276457523899999988609
Q gi|254780369|r 246 PNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 246 p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
||+||||||||+|+|+||||||||||+|||+||++|++||||||||+||||++||||||||++||||+|+|+|
T Consensus 235 p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 307 (307)
T 1efp_A 235 PNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307 (307)
T ss_dssp CGGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred CCCCEEECCCEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf 8222670687450765899962332588887614698899983899998510079889664999999998519
No 4
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-35 Score=244.67 Aligned_cols=188 Identities=15% Similarity=0.239 Sum_probs=156.0
Q ss_pred EEEE-EEEEEEECCCEECHHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 0234-89999802975878999999999873----893479998189268889987078973999944810100012322
Q gi|254780369|r 4 CDMP-VLLLADYNQENLSEQTARIVTAAQKI----SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPV 78 (318)
Q Consensus 4 ~~M~-ilV~~E~~~g~l~~~slEll~~A~~l----g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~ 78 (318)
.||+ ||||+||++|+|++.|+|+|++|++| |.++.++++|.+.++.+.++..+ |+++||.++++.+.+|+++.|
T Consensus 1 ~~~~~IlV~~E~~~g~l~~~slEllt~A~~La~~~g~~v~av~~G~~~~~~a~~l~~~-Ga~~V~~~~~~~~~~~~~~~~ 79 (217)
T 3ih5_A 1 SNANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY-GVDKLHVFDAEGLYPYTSLPH 79 (217)
T ss_dssp --CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG-TCSEEEEEECGGGSSCCHHHH
T ss_pred CCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHH
T ss_conf 9866789999813999988999999999999986399099999679738888877523-873389982430002214778
Q ss_pred HHHHHHHCC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCC--------------CEEEEEEECCCEEEEEE
Q ss_conf 455787403--45604415781034467888875177410132022468--------------72797410695268999
Q gi|254780369|r 79 SDFVVSIAR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISP--------------KIFKRPSYTGNIIQTIE 142 (318)
Q Consensus 79 a~~l~~~~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~--------------~~~~rp~fgG~~~a~v~ 142 (318)
++++.++++ +|++||+++|.+||+|+||||+||++++++||++++.+ ..++||+|+|++++++.
T Consensus 80 ~~~l~~~i~~~~p~~Vl~~~t~~gr~laprlAa~L~~~~vsdv~~l~~~~~~~~~~~~~~~~~l~~tr~~~~G~~~~tv~ 159 (217)
T 3ih5_A 80 TSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADCTSLEIGDHEDKKEGKVYKNLLYQIRPAFGGNIVATIV 159 (217)
T ss_dssp HHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSEEEEEEEEETTTTEEEEEEEEEEEESSSSSCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE
T ss_conf 88999998604986899727740546999999985998122159998268731101222366226999952884899999
Q ss_pred EC-CCCEEEEECCCCCCCCCC-CCCCCCEEEEECCCC-CCCCEEEEEEEEEEC
Q ss_conf 77-984279951686433335-566666156211102-445302588544431
Q gi|254780369|r 143 TT-DTYQIITIRAIAFPPAPK-AEKVASIHKISAEVL-EKYISNTRFIKEERT 192 (318)
Q Consensus 143 ~~-~~~~viTvr~~sf~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~i~~~~~ 192 (318)
+. ..|+|+|+|||+|++.+. ++..+++...+.+.. ......+++++...+
T Consensus 160 ~~~~~p~i~Tvr~g~f~~~~~~~~~~~ev~~~~v~~~~~~~~~~vkvier~~e 212 (217)
T 3ih5_A 160 NPEHRPQMATVREGVMKKEIVSPAYQGEVIRHDVKKYVADTDYVVKVIERHVE 212 (217)
T ss_dssp CSSSSSEEEEECTTSSCCCCSCTTCCCEEEECCHHHHHTTSCCCCCCC-----
T ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEE
T ss_conf 35998689998888415676788986138982368777633315899876632
No 5
>3fet_A Electron transfer flavoprotein subunit alpha related protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.94 E-value=2.4e-26 Score=186.40 Aligned_cols=153 Identities=17% Similarity=0.215 Sum_probs=125.9
Q ss_pred EEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 23489999802975878999999999873893479998189268889987078973999944810100012322455787
Q gi|254780369|r 5 DMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVS 84 (318)
Q Consensus 5 ~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~ 84 (318)
-||+||++|+.+ ...|+.++++.+| ++.+|++|.+ ++.. +|++++|..+++.+.++ +++.+.+
T Consensus 3 ~Mk~lvise~~~-----~~~~~~t~a~~~g-ev~aVvvG~~------~~~~-~Ga~~v~~~~~~~~~~~----~a~~~~~ 65 (166)
T 3fet_A 3 AMKFLTVSDDMN-----FLRQVNTLVAGKG-DMDSVIIGEG------DAKG-LGSKVLYRAKKGTPFDA----VSEGILK 65 (166)
T ss_dssp SEEEEEEESSHH-----HHHHHHHHHGGGE-EEEEEEESCC------CCTT-CCCSEEEEECTTCCHHH----HHHHHHH
T ss_pred CCEEEEEECCHH-----HHHHHHHHHHCCC-CEEEEEECCH------HHHH-CCCEEEEECCCCCHHHH----HHHHHHH
T ss_conf 207999967887-----9999999875059-6689997661------6543-87419999279835778----9999999
Q ss_pred HCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC--CC-CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 403456044157810344678888751774101320224--68-727974106952689997798427995168643333
Q gi|254780369|r 85 IARDYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEII--SP-KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP 161 (318)
Q Consensus 85 ~~~~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~--~~-~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~ 161 (318)
++++|++||+++|++|||++||||+||++++++||++++ ++ .+++||+|||+.+.+++. +++|+|+|||+|++.+
T Consensus 66 ~~~~~d~Vl~~~t~~gr~~a~rlAa~l~~~~vsdv~~l~~~g~~~~~~r~~~gG~~~~~~~~--~~~IvtVrpg~f~~~~ 143 (166)
T 3fet_A 66 IAGNYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEES--DARILTVAPGVIEAKD 143 (166)
T ss_dssp HHTTCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEE--CCCEEEECTTSSCCCC
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEEC--CCEEEEECCCCCCCCC
T ss_conf 84699999991683266789999999699732534899867970899988028808999955--9809998798624776
Q ss_pred CCCCCCCEEEEECCCC
Q ss_conf 5566666156211102
Q gi|254780369|r 162 KAEKVASIHKISAEVL 177 (318)
Q Consensus 162 ~~~~~~~v~~~~~~~~ 177 (318)
.+.+++++.++++..
T Consensus 144 -~~~~~ev~~l~v~~s 158 (166)
T 3fet_A 144 -LGTTPEIRDLEIGQS 158 (166)
T ss_dssp -CSCCCEEEECCCCCC
T ss_pred -CCCCCCEEEECCCCC
T ss_conf -789986699435777
No 6
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=98.98 E-value=1.6e-07 Score=66.63 Aligned_cols=184 Identities=14% Similarity=0.118 Sum_probs=119.3
Q ss_pred EEEEEEEEEEEC-----------CC----------EECHHHHHHHHHHHHH----C-CCEEEEEECCC-HHHHHHHHHCC
Q ss_conf 023489999802-----------97----------5878999999999873----8-93479998189-26888998707
Q gi|254780369|r 4 CDMPVLLLADYN-----------QE----------NLSEQTARIVTAAQKI----S-HDIHVLVLGDN-IENIAQQAARI 56 (318)
Q Consensus 4 ~~M~ilV~~E~~-----------~g----------~l~~~slEll~~A~~l----g-~~v~avv~G~~-~~~~a~~~~~~ 56 (318)
++|+|+|..-+- ++ .+++...-+|-.|-+| + ..+.++.+|.. .+....+++..
T Consensus 2 ~~M~I~VcvKqVpD~~~~i~~~~~~~~~~~~~~~~vinp~D~~AlE~Al~lke~~~g~~v~v~s~Gp~~a~~~Lr~ala~ 81 (255)
T 1efv_B 2 AELRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAM 81 (255)
T ss_dssp --CEEEEECCEEECTTSCCCBCTTSSSBCCTTCCEEECHHHHHHHHHHHHHHHTTSCSEEEEEEEESTTHHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHC
T ss_conf 98789999886778776258848999587169854458657999999999865179843899996807889999998626
Q ss_pred CCCCEEEEECCCHHHHH--HHHHHHHHHHHHCC--CCCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--CC-C
Q ss_conf 89739999448101000--12322455787403--456044157---810344678888751774101320224--68-7
Q gi|254780369|r 57 QGVTQVIVAQSTIFRHK--LAGPVSDFVVSIAR--DYKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--SP-K 126 (318)
Q Consensus 57 ~Gad~V~~~~~~~~~~~--~~~~~a~~l~~~~~--~~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~~-~ 126 (318)
|+|+.+.+.++.+... .+...+.+++..++ +|++||++. ......+.|+||..|+.++++++++++ ++ .
T Consensus 82 -GaD~a~li~d~~~~~~~~~~~~~a~~~a~~~~~~~~DLIl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~i~~~~~~i 160 (255)
T 1efv_B 82 -GADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKL 160 (255)
T ss_dssp -TCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEETTEE
T ss_pred -CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCEE
T ss_conf -8980689860421235544999999999986454999999921132689890789999985887053799999979999
Q ss_pred EEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCC------CCCCCCEEEEECCCCC-CCCEEEEEEEEEE
Q ss_conf 279741069526899977984279951686433335------5666661562111024-4530258854443
Q gi|254780369|r 127 IFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPK------AEKVASIHKISAEVLE-KYISNTRFIKEER 191 (318)
Q Consensus 127 ~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~------~~~~~~v~~~~~~~~~-~~~~~~~~i~~~~ 191 (318)
.++|..-+| ..+++. ..|+++|+.++..+|.-. ......++..+..... ...+.+++++...
T Consensus 161 ~v~r~~e~g--~e~ve~-~lPavitv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~~~~ 229 (255)
T 1efv_B 161 KVEREIDGG--LETLRL-KLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVED 229 (255)
T ss_dssp EEEEEETTE--EEEEEE-ESSEEEEECGGGCCCCCCCHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEEEEC
T ss_pred EEEEECCCC--EEEEEE-CCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEECHHHCCCCCCCCCEEEEEEC
T ss_conf 999995891--999995-598899961787778788867899861598379658995987689727999963
No 7
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=98.78 E-value=4.5e-07 Score=63.79 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=106.5
Q ss_pred EECHHHHHHHHHHHHH----CC--CEEEEEECCC-HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC--C
Q ss_conf 5878999999999873----89--3479998189-268889987078973999944810100012322455787403--4
Q gi|254780369|r 18 NLSEQTARIVTAAQKI----SH--DIHVLVLGDN-IENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIAR--D 88 (318)
Q Consensus 18 ~l~~~slEll~~A~~l----g~--~v~avv~G~~-~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~--~ 88 (318)
.+++...-+|-.|-+| |+ +|+++.+|.. .++...+++.. |+|+.+.+.++.+....+...+.+|++.++ +
T Consensus 34 ~iNp~D~~AlE~Al~lkE~~g~~~~Vt~ls~Gp~~a~~~Lr~alAm-GaD~av~v~d~~~~~~d~~atA~~LA~~i~~~~ 112 (264)
T 1o97_C 34 DLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAK-GADRAVRVWDDAAEGSDAIVVGRILTEVIKKEA 112 (264)
T ss_dssp EECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHHT-TCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 3697679999999999844799569999981508889999999972-797269996057778789999999999997439
Q ss_pred CCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--C-CC--EEEEEEECCCEEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 56044157---810344678888751774101320224--6-87--2797410695268999779842799516864333
Q gi|254780369|r 89 YKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--S-PK--IFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPA 160 (318)
Q Consensus 89 ~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~-~~--~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~ 160 (318)
|++||++. .....-+.|.||.+|+.++++.+++++ + +. +++|...+|. ..+++. ..|+++|+..+..+|-
T Consensus 113 ~DLIl~G~qs~D~~tgqvg~~lAe~Lg~p~vt~v~~~~~~~~~~~~~v~r~~~~g~-~e~v~~-~lPavitv~~~~n~PR 190 (264)
T 1o97_C 113 PDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGM-LQEVEI-NCPAVLTIQLGINKPR 190 (264)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEEEEECGGGC-EEEEEE-ESSCEEEECTTSSCCT
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEECCCCE-EEEEEC-CCCEEEEEECCCCCCC
T ss_conf 99999914346999883428999981998156788888717995599999917984-999987-8998999625767656
No 8
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=98.62 E-value=1.6e-06 Score=60.32 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=106.7
Q ss_pred EECHHHHHHHHHHHHH----CC-CEEEEEECCC-HHHHHHHHHCCCCCCEEEEECC--CHHHHHHHHHHHHHHHHHCC--
Q ss_conf 5878999999999873----89-3479998189-2688899870789739999448--10100012322455787403--
Q gi|254780369|r 18 NLSEQTARIVTAAQKI----SH-DIHVLVLGDN-IENIAQQAARIQGVTQVIVAQS--TIFRHKLAGPVSDFVVSIAR-- 87 (318)
Q Consensus 18 ~l~~~slEll~~A~~l----g~-~v~avv~G~~-~~~~a~~~~~~~Gad~V~~~~~--~~~~~~~~~~~a~~l~~~~~-- 87 (318)
.+++...-+|-.|-+| ++ +++++.+|.. .++...+++.. |+|+.+.+.+ ..+....+...+.+|+..++
T Consensus 34 ~inp~D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alam-Gad~a~~i~~~~~~~~~~d~~~ta~~la~~~~~~ 112 (252)
T 1efp_B 34 SMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAM-GADRAILVVAADDVQQDIEPLAVAKILAAVARAE 112 (252)
T ss_dssp EECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHH-TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 468546999999999754279809999996637879999988623-7982699992453466778999999999998741
Q ss_pred CCCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--CC-CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 456044157---810344678888751774101320224--68-727974106952689997798427995168643333
Q gi|254780369|r 88 DYKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--SP-KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP 161 (318)
Q Consensus 88 ~~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~~-~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~ 161 (318)
+|++||++. .....-+.|.||.+|+.|+++.|++++ ++ ..++|..=+| ..++++ ..|+++|+.++..+|--
T Consensus 113 ~~DLIl~G~~s~D~~~g~vg~~lAe~Lg~P~vt~v~~ie~~~~~~~v~r~~e~g--~e~ve~-~lPavitv~~~~n~PR~ 189 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGG--LQTIAV-SLPAVVTADLRLNEPRY 189 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTE--EEEEEE-ESSEEEEECTTSCCCCC
T ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCC--EEEEEE-CCCEEEEEECCCCCCCC
T ss_conf 999999983256678884216889762898135789999829979999996894--899994-59779996568787767
Q ss_pred C------CCCCCCEEEEECC
Q ss_conf 5------5666661562111
Q gi|254780369|r 162 K------AEKVASIHKISAE 175 (318)
Q Consensus 162 ~------~~~~~~v~~~~~~ 175 (318)
. .....+++..+..
T Consensus 190 pslk~im~A~kk~i~~~~~~ 209 (252)
T 1efp_B 190 ASLPNIMKAKKKPLDEKTAA 209 (252)
T ss_dssp CCHHHHHHHTTSCEEEEEGG
T ss_pred CCHHHHHHHHCCCCEECCHH
T ss_conf 89889998615884171799
No 9
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondrial; NAD dependent deacetylase, sirtuin, substrate peptide complex, hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A
Probab=96.12 E-value=0.0058 Score=37.64 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=47.3
Q ss_pred CCEEEEEEECCHHHHHHHH----CCCCEEEEEECCCCCCHH---HCCCEEEECCHHHHHHHHHHCC
Q ss_conf 7389999616726455551----689889997665998831---0276457523899999988609
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM----KDSKVIVSINTDENAPIF---KISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApIf---~~ad~giv~D~~~vlp~l~~~l 318 (318)
.+|.|.+|-|.+++-..++ +....+|-||+||-.|.- +.+|+.+-||.-+++++|.++|
T Consensus 198 aDlllviGTSl~V~pa~~l~~~~~~~~~~viIN~~~~~~~~~~~~~~D~~~~gd~~~~~~~L~~~L 263 (285)
T 3glr_A 198 ADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELL 263 (285)
T ss_dssp CSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHC
T ss_conf 999999897886338878999998799799992998887777786260556288999999999984
No 10
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=96.09 E-value=0.0058 Score=37.61 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=47.4
Q ss_pred CCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 7389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
.++.|.+|-|+.+.-..++ +.-..+|-||.+|- |.-+.+|+.|-+|.-|+||+|.|+|
T Consensus 181 ~Dl~lvvGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~t-~~d~~~d~~i~~~~~e~l~~l~~~l 243 (246)
T 1yc5_A 181 ASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEG 243 (246)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCEEECCHHCCHHHHHHCCCCEEEECCCCC-CCCCCEEEEECCCHHHHHHHHHHHC
T ss_conf 99999969985880132118999975994999869999-9987243998188999999999971
No 11
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=95.94 E-value=0.011 Score=35.89 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=48.0
Q ss_pred CCCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 57389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r 259 SPELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 259 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
+.++.|.+|-|++++=...+ +.-..+|-||.+| .+.-..+|+-|.|+.-|+||+|.|+|
T Consensus 167 ~aDlllvvGTSl~V~pa~~l~~~a~~~g~~iiiIN~~~-t~~d~~~~~~i~g~a~e~l~~l~~~l 230 (235)
T 1s5p_A 167 MADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEP-SQVGNEFAEKYYGPASQVVPEFVEKL 230 (235)
T ss_dssp HCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSS-CC---CCSEEEESCHHHHHHHHHHHH
T ss_pred HCCEEEEECCCCEECCHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 29989998889705037789999997598399989998-89987328899588999999999999
No 12
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=95.90 E-value=0.01 Score=36.11 Aligned_cols=59 Identities=19% Similarity=0.290 Sum_probs=46.6
Q ss_pred CCCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 57389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r 259 SPELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 259 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
..++.+.+|-|+++.-...+ +....+|-||.+| .+.-..+|+-|.||..|+||+|.++|
T Consensus 183 ~~DlllviGTSl~v~p~~~l~~~a~~~g~~vi~IN~~~-t~~d~~~d~~i~g~~~evL~~l~~~l 246 (253)
T 1ma3_A 183 HCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEP-TMADPIFDVKIIGKAGEVLPKIVEEV 246 (253)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSC-CTTGGGCSEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCEEEECCHHHHHHHHCCCCEEEECCCC-CCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 39989997678746452068999997499299988999-89998635899798999999999999
No 13
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=95.69 E-value=0.09 Score=30.03 Aligned_cols=115 Identities=12% Similarity=0.136 Sum_probs=71.9
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCC---------EECCCEEEEEEECCHHH
Q ss_conf 456413677778335688999998763985974257886788888895401597---------54573899996167264
Q gi|254780369|r 203 KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGV---------TVSPELYIAAGISGAIQ 273 (318)
Q Consensus 203 ~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~---------~v~P~lYia~GISGa~q 273 (318)
.+|+.||......+.. +.+.+||+.+|+-|-+|...-+.---.+...+|.-|. .-.+|+-|++|-+=...
T Consensus 292 PvivvG~g~~~~~~~~-~~l~~lae~l~~PV~~t~~~~g~~~~~~p~~~g~~G~~~~~~a~~~~~~aDlvl~lG~rl~~~ 370 (677)
T 1t9b_A 292 PVLYVGAGILNHADGP-RLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDR 370 (677)
T ss_dssp EEEEECGGGGGSTTHH-HHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCTT
T ss_pred CEEEECCCCCHHHHHH-HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 8899857631205799-999999887398789763347766888820035446667789998651699899979967645
Q ss_pred ------------HHHHHCCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf ------------555516898899976659988-310276457523899999988609
Q gi|254780369|r 274 ------------HISGMKDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 274 ------------H~~G~~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l 318 (318)
.......-..+|-+|.||..- -....+..+++|...+|.+|++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~i~ididp~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 428 (677)
T 1t9b_A 371 VTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKI 428 (677)
T ss_dssp TSCSGGGSSHHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCHHHCCCCCCCCEEEEECCHHHHHCCCCCCHHCCCHHHHHHHHHHHHC
T ss_conf 4577322463001100035553477307878830021310000020999999999745
No 14
>2b4y_A NAD-dependent deacetylase sirtuin-5; histone deacetylase, structural genomics, structural genomics consortium, SGC, hydrolase; HET: APR EPE; 1.90A {Homo sapiens} SCOP: c.31.1.5 PDB: 2nyr_A*
Probab=95.67 E-value=0.02 Score=34.25 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=45.0
Q ss_pred CCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHH
Q ss_conf 7389999616726455551-----68988999766599883102764575238999999886
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEK 316 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~ 316 (318)
.++.|.+|-|..+.-...+ +.-..||-||.+|. |.-+.+|+-+.||..++||+|+.
T Consensus 211 ~DlllviGTSl~V~pa~~l~~~a~~~g~~vi~iN~~~t-~~~~~~d~~i~g~~~~vLp~ll~ 271 (271)
T 2b4y_A 211 CDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT-PATNRFRFHFQGPCGTTLPEALA 271 (271)
T ss_dssp CSEEEEESCCSCSTTGGGHHHHHHHTTCCEEEEESSCC-TTGGGSSEEEESCHHHHHHHHTC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCEEEECCHHHHHHHHHC
T ss_conf 99999979898210788999999986992999829999-99881088995879999999869
No 15
>2ez9_A Pyruvate oxidase; TPP enzyme, reaction intermediate analogue, oxidoreductase; HET: TDK FAD; 1.60A {Lactobacillus plantarum} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1y9d_A* 1pow_A* 1pox_A*
Probab=95.55 E-value=0.083 Score=30.27 Aligned_cols=283 Identities=14% Similarity=0.100 Sum_probs=135.1
Q ss_pred HHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH
Q ss_conf 99987389347999818926888998707897399994481010001232245578740345604415781034467888
Q gi|254780369|r 28 TAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASANAMGKDILPRV 107 (318)
Q Consensus 28 ~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~t~~Grdlaprl 107 (318)
..-++.|-+.-..+.|.....+.+.+.....--+.+...|+.-.-|.+..|+++ -.++.+++..+.+-.-.+.+-+
T Consensus 19 ~~L~~~GV~~vfg~pG~~~~~l~~al~~~~~~i~~i~~~~E~~Aa~aA~g~ar~----tg~~~v~~~tsGpG~~N~~~av 94 (603)
T 2ez9_A 19 KVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKL----TGKIGVCFGSAGPGGTHLMNGL 94 (603)
T ss_dssp HHHHHTTCCEEEECCCGGGHHHHHHHHHTTTTSEEEECSSHHHHHHHHHHHHHH----HSSCEEEEECTTHHHHTTHHHH
T ss_pred HHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH----HCCCEEEEECCCHHHHHHHHHH
T ss_conf 999987999999968976599999998657997598038889999999999998----6998899976467899999999
Q ss_pred -HHHCCC-CEECCCEEEC----CCC---E-EEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf -875177-4101320224----687---2-79741069526899977984279951686433335566666156211102
Q gi|254780369|r 108 -AAMLDV-MQVSEVIEII----SPK---I-FKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKVASIHKISAEVL 177 (318)
Q Consensus 108 -AarL~~-~~vsdvv~i~----~~~---~-~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~~~v~~~~~~~~ 177 (318)
.|..+. |++.=+-+.. +.. . -..+.|..-.-........-.+..+...++...... ..+....+..+..
T Consensus 95 ~~A~~~~~Pll~isg~~~~~~~~~~~~Q~~d~~~~~~~~~k~~~~v~~~~~~~~~~~~a~~~a~~~-~Gpv~l~iP~d~~ 173 (603)
T 2ez9_A 95 YDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAH-QGVAVVQIPVDLP 173 (603)
T ss_dssp HHHHHTTCCEEEEEEECCTTTTTSCCTTCCCCHHHHTTTCSEEEECCCSTTHHHHHHHHHHHHHHH-TSEEEEEEETTGG
T ss_pred HHHHHHCCCEEEEECCCCHHHCCCCCCHHEEHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC-CCCCCCCCCCCHH
T ss_conf 999951998799968887211689844200023121230012366411210688999999998745-7987656786232
Q ss_pred CCCCEE----EEEEEEEECCCCCCC----------HHHCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHC
Q ss_conf 445302----588544431456667----------00074-564136777783356889999987639859742578867
Q gi|254780369|r 178 EKYISN----TRFIKEERTSLSPTD----------LSSAK-IVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDA 242 (318)
Q Consensus 178 ~~~~~~----~~~i~~~~~~~~~v~----------L~~A~-iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~ 242 (318)
...... .............++ |..|+ -++-.|.|..... +.+.+||++||+-|-.|...-+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~a~rPvii~G~g~~~a~---~~l~~lae~l~~PV~~t~~~k~~ 250 (603)
T 2ez9_A 174 WQQIPAEDWYASANSYQTPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGARKAG---KELEQLSKTLKIPLMSTYPAKGI 250 (603)
T ss_dssp GSEEETTTCCCCGGGCCCCCCCBCCHHHHHHHHHHHHHCSSEEEEECGGGTTCH---HHHHHHHHHHTCCEEECGGGTTS
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHH---HHHHHHHHHHCCCEEEECHHCCC
T ss_conf 124552124555555678889998999999999998754587650687554899---99999999979999973031375
Q ss_pred CCCCHHHHHHCCCCE---------ECCCEEEEEEECCHHHHHH-HHCCCCEEEEEECCCCC-CHHHCCCEEEECCHHHHH
Q ss_conf 888888954015975---------4573899996167264555-51689889997665998-831027645752389999
Q gi|254780369|r 243 GFAPNDWQIGQTGVT---------VSPELYIAAGISGAIQHIS-GMKDSKVIVSINTDENA-PIFKISDYFIVGDIFKIL 311 (318)
Q Consensus 243 gw~p~~~qIG~tG~~---------v~P~lYia~GISGa~qH~~-G~~~s~~IvAIN~D~~A-pIf~~ad~giv~D~~~vl 311 (318)
-.-.+....|..|.. -.+++.+++|-+-...... .......++-||.||.- .-+...|..+++|..+++
T Consensus 251 ~~~~~~~~~g~~g~~~~~~~~~~~~~~d~vl~iG~~~~~~~~~~~~~~~~~~i~idid~~~~~~~~~~~~~~~~d~~~~l 330 (603)
T 2ez9_A 251 VADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTL 330 (603)
T ss_dssp SCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHH
T ss_conf 55678544676688688999998622554885044467654454345566401204898996555454433001099999
Q ss_pred HHHHHCC
Q ss_conf 9988609
Q gi|254780369|r 312 PEIEKNL 318 (318)
Q Consensus 312 p~l~~~l 318 (318)
..|++++
T Consensus 331 ~~l~~~~ 337 (603)
T 2ez9_A 331 AAILAQV 337 (603)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
T ss_conf 9999986
No 16
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=95.54 E-value=0.033 Score=32.80 Aligned_cols=285 Identities=15% Similarity=0.111 Sum_probs=132.8
Q ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCC-CCHHHHH
Q ss_conf 99999873893479998189268889987078-973999944810100012322455787403456044157-8103446
Q gi|254780369|r 26 IVTAAQKISHDIHVLVLGDNIENIAQQAARIQ-GVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASA-NAMGKDI 103 (318)
Q Consensus 26 ll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~-Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~-t~~Grdl 103 (318)
++..=++.|-+.-..+.|.....+.+.+.... +. +++.+.|+.-.-|.++.|+++ -.++.+++..+ +-....+
T Consensus 10 i~~~L~~~Gv~~vfg~pG~~~~~l~~al~~~~~~i-~~v~~~~E~~A~~~A~Gyar~----tg~~~v~~~tsGpg~~N~~ 84 (589)
T 2pgn_A 10 IVEALEEYGTEQVVGFIGHTSHFVADAFSKSHLGK-RVINPATELGGAWMVNGYNYV----KDRSAAVGAWHCVGNLLLH 84 (589)
T ss_dssp HHHHHHHTTCCEEEEECSGGGHHHHHHHHTSTTST-TCBCCSSHHHHHHHHHHHHHH----HTSCCEEEEEEGGGGGGCH
T ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCC-EEEECCHHHHHHHHHHHHHHH----HCCCEEEECCCCHHHHHHH
T ss_conf 99999986999899988730899999998379998-899235399999999999999----6998899917788999999
Q ss_pred HHHHHHHCCCCEECCCEE-----ECCC----CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 788887517741013202-----2468----7279741069526899977984279951686433335566666156211
Q gi|254780369|r 104 LPRVAAMLDVMQVSEVIE-----IISP----KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKVASIHKISA 174 (318)
Q Consensus 104 aprlAarL~~~~vsdvv~-----i~~~----~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~~~v~~~~~ 174 (318)
-+-..+..+.-.+--.+. ..+. .......|..-.-......+.-.+..+-..+|..+......+-...+..
T Consensus 85 ~al~eA~~~~~Pll~It~~~~~~~~g~~~~~~~~~~~~f~~~~k~~~~v~~~~~i~~~l~~A~~~A~~~~~GPV~i~iP~ 164 (589)
T 2pgn_A 85 AAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQQVPWQSFTPIARSTQRVERLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp HHHHHHHHTTCCEEEEEEESCGGGTTCTTCSSCCCGGGGTTTSSEEEECCSGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_conf 99999866479889996888753368760445647876234334201036788899999999999845898754304752
Q ss_pred CCCCCC-----CEEEEEEE-EEECCCCCCC-------HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHH
Q ss_conf 102445-----30258854-4431456667-------0007-45641367777833568899999876398597425788
Q gi|254780369|r 175 EVLEKY-----ISNTRFIK-EERTSLSPTD-------LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAV 240 (318)
Q Consensus 175 ~~~~~~-----~~~~~~i~-~~~~~~~~v~-------L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~v 240 (318)
+..... ........ .........+ |..| +.++-.|+|....+.+ +.+.+||+.+|+-|-.|-..
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~L~~akrpvIi~G~~~~~~~~~-~~l~~lae~~~~PV~~t~~~- 242 (589)
T 2pgn_A 165 DLTADQIDDKALVPRGATRAKSVLHAPNEDVREAAAQLVAAKNPVILAGGGVARSGGS-EALLKLAEMVGVPVVTTSTG- 242 (589)
T ss_dssp HHHHCEEECTTTSCCCCCCCCCCCCCCHHHHHHHHHHHHHCSSEEEEECHHHHHHTCH-HHHHHHHHHHTCCEEECTTT-
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHH-HHHHHHHHHHCCCEEECCCC-
T ss_conf 5544203653346544566887788998999999999985779757515522232269-99999999979797854567-
Q ss_pred HCCCCCHHH--HHHCCCC---------EECCCEEEEEEECCHHHHHHH--HCCCCEEEEEECCCCC-CHHHCCCEEEECC
Q ss_conf 678888889--5401597---------545738999961672645555--1689889997665998-8310276457523
Q gi|254780369|r 241 DAGFAPNDW--QIGQTGV---------TVSPELYIAAGISGAIQHISG--MKDSKVIVSINTDENA-PIFKISDYFIVGD 306 (318)
Q Consensus 241 D~gw~p~~~--qIG~tG~---------~v~P~lYia~GISGa~qH~~G--~~~s~~IvAIN~D~~A-pIf~~ad~giv~D 306 (318)
.|.+|..+ ..|..|. .-.+++.+++|..=....+.. ......+|-|+.|+.- .-....|..+++|
T Consensus 243 -~g~~~~~~~~~~g~~g~~~~~~~~~~~~~~dlii~~G~~l~~~~~~~~~~~~~~~~i~i~~d~~~~~~~~~~~~~i~~d 321 (589)
T 2pgn_A 243 -AGVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLGSRLSDWGIAQGYITKMPKFVHVDTDPAVLGTFYFPLLSVVAD 321 (589)
T ss_dssp -TTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCTTTTTTTTTCCCCSEEEEESCGGGTTSSSCCSEEEECC
T ss_pred -CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEEEEC
T ss_conf -7766860013567767767899999986306067732557755566765568862489825845416666764258735
Q ss_pred HHHHHHHHHHCC
Q ss_conf 899999988609
Q gi|254780369|r 307 IFKILPEIEKNL 318 (318)
Q Consensus 307 ~~~vlp~l~~~l 318 (318)
...+|.+|.+.|
T Consensus 322 ~~~~l~~l~~~l 333 (589)
T 2pgn_A 322 AKTFMEQLIEVL 333 (589)
T ss_dssp HHHHHHHHHHHG
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999860
No 17
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=95.08 E-value=0.017 Score=34.58 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=46.4
Q ss_pred CEECCCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCC---HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 75457389999616726455551-----6898899976659988---310276457523899999988609
Q gi|254780369|r 256 VTVSPELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAP---IFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 256 ~~v~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~Ap---If~~ad~giv~D~~~vlp~l~~~l 318 (318)
..-+++|.|.+|-|..++=.+++ ++.+ +|-||.+|--+ --..+|+-|-||+-+++|+|.++|
T Consensus 216 ~~~~~DlliviGTSL~V~Pa~~l~~~~~~~~~-~viIN~e~~~~~~~~~~~~Dl~i~g~~d~v~~~L~~~L 285 (361)
T 1q14_A 216 KHPQQPLVIVVGTSLAVYPFASLPEEIPRKVK-RVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 285 (361)
T ss_dssp ---CCCEEEEESCCCCSTTGGGHHHHSCTTSE-EEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHH
T ss_pred HHCCCCEEEEECCCCEECCHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 30468999997968754187677999974998-89997997888766788754899582999999999981
No 18
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=95.07 E-value=0.034 Score=32.72 Aligned_cols=59 Identities=27% Similarity=0.526 Sum_probs=46.0
Q ss_pred CCCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 57389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r 259 SPELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 259 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
+.++.|.+|-|+.+.=...+ +.-..+|-||.+| .|+-..+|+.|-||..++||+|.++|
T Consensus 177 ~~DlllviGTSl~V~pa~~l~~~a~~~ga~~i~IN~~~-t~~d~~~d~~i~g~~~e~l~~l~~~l 240 (249)
T 1m2k_A 177 RADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDE-TPLTPIADYSLRGKAGEVMDELVRHV 240 (249)
T ss_dssp HCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSC-CTTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCEECCHHHHHHHHHHCCCEEEEECCCC-CCCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf 69999993788621212047899997598599987999-89998600999799999999999999
No 19
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.043 Score=32.08 Aligned_cols=57 Identities=21% Similarity=0.169 Sum_probs=44.0
Q ss_pred CCEEEEEEECCHHHHHHHH----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 7389999616726455551----6898899976659988310276457523899999988609
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
+++.|.+|-|.++.=...+ +....+|.||.+|-. -..+|+-|-||.-+++|+|.++|
T Consensus 256 aDlllviGTSL~V~pa~~lv~~a~~~~~~viIN~~pt~--~~~~d~~i~g~~d~v~~~L~~~L 316 (354)
T 2hjh_A 256 CDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVK--HAEFDLSLLGYCDDIAAMVAQKC 316 (354)
T ss_dssp CCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCT--TSCCSEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCEECCHHHHHHHHHCCCCEEEECCCCCC--CCCEEEEEECCHHHHHHHHHHHH
T ss_conf 99999989887667988999999849989998199899--99740899585999999999980
No 20
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=94.88 E-value=0.028 Score=33.27 Aligned_cols=65 Identities=15% Similarity=0.087 Sum_probs=46.6
Q ss_pred CCCEECCCEEEEEEECCHHHHHHH---H-CCCCEEEEEECCCCC---CHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 597545738999961672645555---1-689889997665998---8310276457523899999988609
Q gi|254780369|r 254 TGVTVSPELYIAAGISGAIQHISG---M-KDSKVIVSINTDENA---PIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 254 tG~~v~P~lYia~GISGa~qH~~G---~-~~s~~IvAIN~D~~A---pIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
....-+.+|.|.+|-|++++=..+ . +....+|-||.++-. +-...+|+.|-||.-+++|+|.++|
T Consensus 206 ~~~~~~~Dl~lviGTSl~V~Pa~~l~~~a~~~~~~viIN~~~~~~~~~~~~~~Dl~i~g~~~evl~~L~~~L 277 (289)
T 1q1a_A 206 SGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 277 (289)
T ss_dssp ----CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEEECCCCEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf 653045888999799953517888999996289789997987888765567657899686999999999982
No 21
>3k35_A Mono-ADP-ribosyltransferase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, structural genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=94.67 E-value=0.059 Score=31.23 Aligned_cols=58 Identities=21% Similarity=0.265 Sum_probs=46.3
Q ss_pred CCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 7389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
++|.|.+|-|..++=...+ +.-..||-||.+|. |.=..+|+-|-||.-+++|+|.+.|
T Consensus 207 aDllIvvGTSl~V~pa~~l~~~a~~~g~~viiIN~~~t-~~d~~~dl~i~g~~~evl~~L~~~L 269 (318)
T 3k35_A 207 ADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMKHL 269 (318)
T ss_dssp CSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCEECCHHHHHHHHHHCCCEEEEECCCCC-CCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 99999979887787774799999964995999869999-9987440899699899999999984
No 22
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=94.59 E-value=0.05 Score=31.67 Aligned_cols=117 Identities=20% Similarity=0.173 Sum_probs=77.8
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHH--HHHCCC-C-EECCCEEEEEEECCHHH
Q ss_conf 0007-45641367777833568899999876398597425788678888889--540159-7-54573899996167264
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDW--QIGQTG-V-TVSPELYIAAGISGAIQ 273 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~--qIG~tG-~-~v~P~lYia~GISGa~q 273 (318)
|.+| +.|+-+|.|....+.. +.+.+||+.+|+-+-.|-.. .|+.|.++ ..|..+ . .-.+++.+.+|-+-...
T Consensus 210 l~~akrPvii~G~~~~~~~a~-~~l~~lae~~g~pv~tt~~~--k~~~~~~~~~~~~~~~~~~~~~aD~vl~vG~~~~~~ 286 (568)
T 2c31_A 210 IKNAKRPVIMLGKGAAYAQCD-DEIRALVEETGIPFLPMGMA--KGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWL 286 (568)
T ss_dssp HHTCSSEEEEECHHHHHHTCH-HHHHHHHHHHTCCEEECGGG--TTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGG
T ss_pred HHCCCCCEEEECCCCCHHHHH-HHHHHHHHHHCCCEEECCCC--CCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCE
T ss_conf 971799489988872210179-99999999729986630212--456776686421012114455676887516776501
Q ss_pred HHHHH-----CCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 55551-----6898899976659988-310276457523899999988609
Q gi|254780369|r 274 HISGM-----KDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 274 H~~G~-----~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l 318 (318)
...|- .....+|-++.|+... -+...+..+.+|+.+++..|.+.|
T Consensus 287 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~l 337 (568)
T 2c31_A 287 MQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKAL 337 (568)
T ss_dssp GGGGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHH
T ss_conf 204766334565541353036766624665655645653999999999986
No 23
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=94.25 E-value=0.064 Score=31.00 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=77.1
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCC--EECCCEEEEEEECCHHHHH
Q ss_conf 0007-456413677778335688999998763985974257886788888895401597--5457389999616726455
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGV--TVSPELYIAAGISGAIQHI 275 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~--~v~P~lYia~GISGa~qH~ 275 (318)
|..+ +.++-+|.|....+.. +.+.+||+++++-+-+|--.-+..--.+....|..+. .-.+++.+.+|-+-..+..
T Consensus 208 l~~akrpvii~G~~~~~~~a~-~~l~~la~~~~~pv~~t~~~~~~~~~~~~~~~g~~~~~~~~~~D~vl~~g~~~~~~~~ 286 (564)
T 2q28_A 208 LAKAERPLIILGKGAAYSQAD-EQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLA 286 (564)
T ss_dssp HHHCSSEEEEECHHHHHHTCH-HHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGG
T ss_pred HHHCCCCEEEEECCCCCCCHH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHCEECCCCCCCCCC
T ss_conf 972799889990572323259-9999999975899644521131457766544333200010402211001565443235
Q ss_pred HHHC---CCCEEEEEECCCCCCHH-HCCCEEEECCHHHHHHHHHHCC
Q ss_conf 5516---89889997665998831-0276457523899999988609
Q gi|254780369|r 276 SGMK---DSKVIVSINTDENAPIF-KISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 276 ~G~~---~s~~IvAIN~D~~ApIf-~~ad~giv~D~~~vlp~l~~~l 318 (318)
.+.. ....++.++.|++..-+ ...++.+++|...++.+|.+.|
T Consensus 287 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~l 333 (564)
T 2q28_A 287 HGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAEL 333 (564)
T ss_dssp GGTTTSCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEECCCHHHHHCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 56334576555210037614531145540213010578999999998
No 24
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=93.86 E-value=0.14 Score=28.83 Aligned_cols=93 Identities=16% Similarity=0.101 Sum_probs=53.7
Q ss_pred EEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCH----------HHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 234899998029758789999999998738934799981892----------6888998707897399994481010001
Q gi|254780369|r 5 DMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNI----------ENIAQQAARIQGVTQVIVAQSTIFRHKL 74 (318)
Q Consensus 5 ~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~----------~~~a~~~~~~~Gad~V~~~~~~~~~~~~ 74 (318)
.|+|||++-|.+...--. --.|.+-.+-|.+|.++++..+. ...+..+.+..|++.++..+-++...+.
T Consensus 3 ~~~ILvi~aHPDDe~lg~-GGtlak~~~~G~~V~vv~lT~G~~~~~~~~~~R~~E~~~A~~~LGv~~~~~l~~~D~~~~~ 81 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGM-AGTIAKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGLYM 81 (242)
T ss_dssp CCSEEEEESSTTHHHHHH-HHHHHHHHHTTCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCCCC
T ss_pred CCCEEEEEECCCHHHHHH-HHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 971899987888678878-9999999977991999997389778664167799999999986397503316788544466
Q ss_pred HHHHHHHHHHHCC--CCCEEECCCCC
Q ss_conf 2322455787403--45604415781
Q gi|254780369|r 75 AGPVSDFVVSIAR--DYKTIMASANA 98 (318)
Q Consensus 75 ~~~~a~~l~~~~~--~~~~Vl~~~t~ 98 (318)
.+.+...|..+++ +|++|+.++..
T Consensus 82 ~~e~~~~l~~~i~~~~Pd~V~t~~~~ 107 (242)
T 2ixd_A 82 KEEYIREIVKVIRTYKPKLVFAPYYE 107 (242)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECSC
T ss_pred HHHHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 99999999999754054478746888
No 25
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=93.53 E-value=0.077 Score=30.48 Aligned_cols=115 Identities=19% Similarity=0.194 Sum_probs=74.1
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHH---HHHCCCCCHHHHHHCCCCE----------ECCCEEE
Q ss_conf 0007-456413677778335688999998763985974257---8867888888954015975----------4573899
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRD---AVDAGFAPNDWQIGQTGVT----------VSPELYI 264 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp---~vD~gw~p~~~qIG~tG~~----------v~P~lYi 264 (318)
|..| +.|+-+|+|....+.. +.+.+||+++|+-+-.|-. +++. .+....|..|-. -.+++-|
T Consensus 223 L~~a~rpvii~G~g~~~~~~~-~~l~~lae~~~~Pv~tt~~~~g~~~~---~~~~~~g~~g~~~~~~~~~~~~~~aDlvl 298 (616)
T 2pan_A 223 LIQAERPVIVAGGGVINADAA-ALLQQFAELTSVPVIPTLMGWGCIPD---DHELMAGMVGLQTAHRYGNATLLASDMVF 298 (616)
T ss_dssp HHTCSSEEEEECHHHHHTTCH-HHHHHHHHHHTCCEEECTTTTTSSCT---TSTTBCCCCSSSSCCHHHHHHHHHCSEEE
T ss_pred HHCCCCEEEEECCCCCCCHHH-HHHHHHHHHHCCCEEECCCCCCCCCC---CCCCCCCCCCCCCCCHHHHHHCCCCCEEE
T ss_conf 973798199989871410399-99999999879898952455775468---87333575567665334554312562798
Q ss_pred EEEECCHHHHHHHH---CCCCEEEEEECCCCCCHHH-CCCEEEECCHHHHHHHHHHC
Q ss_conf 99616726455551---6898899976659988310-27645752389999998860
Q gi|254780369|r 265 AAGISGAIQHISGM---KDSKVIVSINTDENAPIFK-ISDYFIVGDIFKILPEIEKN 317 (318)
Q Consensus 265 a~GISGa~qH~~G~---~~s~~IvAIN~D~~ApIf~-~ad~giv~D~~~vlp~l~~~ 317 (318)
.+|..=...+..+. .....||-||.||+..-.. ..|.++++|+..++..+.+.
T Consensus 299 ~lG~~~~~~~~~~~~~~~~~~~iI~Id~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (616)
T 2pan_A 299 GIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEV 355 (616)
T ss_dssp EESCCCCHHHHSSHHHHHTTCEEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 735566655443233468998399997865762013245401123389999998988
No 26
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=92.53 E-value=0.54 Score=25.08 Aligned_cols=289 Identities=13% Similarity=0.112 Sum_probs=128.5
Q ss_pred CEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf 75878999999999873893479998189268889987078973999944810100012322455787403456044157
Q gi|254780369|r 17 ENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASA 96 (318)
Q Consensus 17 g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~ 96 (318)
++....+--++-.-++.|-+.-..+.|.....+.+.+.+..+. +++...|+.-.-|.++.|+++ -.++.+++..+
T Consensus 9 ~~~~~Gad~l~~~L~~~GV~~vfg~pG~~~~~l~~al~~~~~i-~~i~~~~E~~A~~~A~Gyar~----tg~p~v~~~ts 83 (590)
T 1ybh_A 9 DQPRKGADILVEALERQGVETVFAYPGGASMEIHQALTRSSSI-RNVLPRHEQGGVFAAEGYARS----SGKPGICIATS 83 (590)
T ss_dssp TCCEEHHHHHHHHHHTTTCCEEEECCCGGGHHHHHHHHHCSSC-EECCCSSHHHHHHHHHHHHHH----HSSCEEEEECT
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHH----HCCCEEEEECC
T ss_conf 9998499999999998799899997897669999999865997-599038889999999999999----79988999814
Q ss_pred CCH-HHHHHHHHHHHCCCCEECCCEE-----ECCCC---EE-EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 810-3446788887517741013202-----24687---27-97410695268999779842799516864333355666
Q gi|254780369|r 97 NAM-GKDILPRVAAMLDVMQVSEVIE-----IISPK---IF-KRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKV 166 (318)
Q Consensus 97 t~~-GrdlaprlAarL~~~~vsdvv~-----i~~~~---~~-~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~ 166 (318)
.+- ..-+.+-..|..+.-.+=-.+. ..+.. .. ...+|+.-........+.-.+..+-..+|..+-. ...
T Consensus 84 Gpg~~n~~~al~~A~~~~~Pll~isg~~~~~~~g~~~~q~~dq~~~~~~~~k~~~~v~~~~~i~~~l~~A~~~a~~-~~~ 162 (590)
T 1ybh_A 84 GPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATS-GRP 162 (590)
T ss_dssp THHHHTTHHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSEEEECCCGGGHHHHHHHHHHHHHS-SSC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHH-CCC
T ss_conf 7789999999999997299979996888877617786224434420565066788769999999999999999852-899
Q ss_pred CCE-EEEECCCCCC-----CCEEEE---EEEEEECCCCCC-------CHHHC--CEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 661-5621110244-----530258---854443145666-------70007--45641367777833568899999876
Q gi|254780369|r 167 ASI-HKISAEVLEK-----YISNTR---FIKEERTSLSPT-------DLSSA--KIVISGGKSFGSMENFHKLLLPLAKK 228 (318)
Q Consensus 167 ~~v-~~~~~~~~~~-----~~~~~~---~i~~~~~~~~~v-------~L~~A--~iVVsgGRGi~~~enf~~l~~~LA~~ 228 (318)
+.| ..+..+.... .....+ .....+.....- -|..| .+|+. |+|..... +.+.+||++
T Consensus 163 GPV~l~ip~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~rpvii~-G~~~~~~~---~~l~~lae~ 238 (590)
T 1ybh_A 163 GPVLVDVPKDIQQQLAIPNWEQAMRLPGYMSRMPKPPEDSHLEQIVRLISESKKPVLYV-GGGCLNSS---DELGRFVEL 238 (590)
T ss_dssp CEEEEEEEHHHHHCEECCCTTCCCCCHHHHHHSCCCCCHHHHHHHHHHHHHCSSEEEEE-CGGGTTCH---HHHHHHHHH
T ss_pred CEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE-CCCCCCHH---HHHHHHHHH
T ss_conf 44999806641103357775323457776655678988899999999997179909998-98544459---999999998
Q ss_pred CCCEEEEEHH---HHHCCCCCHHHHHHCCCC---------EECCCEEEEEEECCHHHHH---HHHCCCCEEEEEECCCC-
Q ss_conf 3985974257---886788888895401597---------5457389999616726455---55168988999766599-
Q gi|254780369|r 229 LGAAIGATRD---AVDAGFAPNDWQIGQTGV---------TVSPELYIAAGISGAIQHI---SGMKDSKVIVSINTDEN- 292 (318)
Q Consensus 229 LgaavG~SRp---~vD~gw~p~~~qIG~tG~---------~v~P~lYia~GISGa~qH~---~G~~~s~~IvAIN~D~~- 292 (318)
+|+-|-+|-. +.+. .+....|..|. .-.+|+-|.+|-+=..+-. .-......+|-|+.|+.
T Consensus 239 ~~~Pv~~t~~~~~~~~~---~~~~~~g~~g~~~~~~a~~~~~~aD~vl~lG~~~~~~~~~~~~~~~~~~~vi~i~~d~~~ 315 (590)
T 1ybh_A 239 TGIPVASTLMGLGSYPA---DDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAE 315 (590)
T ss_dssp HCCCEEECTTTTTSSCT---TSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGTTTTSEEEEEESCTTT
T ss_pred HCCCEEECCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHH
T ss_conf 79899987535756788---675456645676779998666419999997986753455542235898728998279899
Q ss_pred CCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 88310276457523899999988609
Q gi|254780369|r 293 APIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 293 ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
-.-+...|..+++|...++.+|.+.|
T Consensus 316 ~~~~~~~~~~v~~d~~~~l~~l~~~l 341 (590)
T 1ybh_A 316 IGKNKTPHVSVCGDVKLALQGMNKVL 341 (590)
T ss_dssp TTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred HCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 46554774466152899999999998
No 27
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=92.24 E-value=0.28 Score=26.86 Aligned_cols=119 Identities=19% Similarity=0.121 Sum_probs=73.6
Q ss_pred HHHCCE-EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCCEE--------------CCCEE
Q ss_conf 000745-641367777833568899999876398597425788678888889540159754--------------57389
Q gi|254780369|r 199 LSSAKI-VISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGVTV--------------SPELY 263 (318)
Q Consensus 199 L~~A~i-VVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~~v--------------~P~lY 263 (318)
|.+|+. ++-+|+|....+.. +.+.+||+.||+-|-+|-..-..=.-.|...+|..|..- ..++.
T Consensus 213 l~~akrpvii~g~g~~~~~~~-~~l~~lae~l~~Pv~~t~~~~~~~~~~hp~~~G~~~~~~~~~~~~~~~~~~~~~~D~i 291 (573)
T 2iht_A 213 LAEAKHPVLVVGAAAIRSGAV-PAIRALAERLNIPVITTYIAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLV 291 (573)
T ss_dssp HHHCSSEEEEECHHHHHTTCH-HHHHHHHHHHTCCEEECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEE
T ss_pred HHHCCCCEEEECCCCCCCCHH-HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEE
T ss_conf 985689879746874661158-9999999987989998536678889886422143000134664447899751356779
Q ss_pred EEEEECCHHHHHHHH---CCCCEEEEEECCCCCCH-HHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 999616726455551---68988999766599883-10276457523899999988609
Q gi|254780369|r 264 IAAGISGAIQHISGM---KDSKVIVSINTDENAPI-FKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 264 ia~GISGa~qH~~G~---~~s~~IvAIN~D~~ApI-f~~ad~giv~D~~~vlp~l~~~l 318 (318)
+++|-+-..+-..+. .....++-++.|++.-. ....|..+++|...++.++.+.+
T Consensus 292 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 350 (573)
T 2iht_A 292 LTVGYDYAEDLRPSMWQKGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETAT 350 (573)
T ss_dssp EEETCCGGGCCCHHHHCCSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHT
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99577642235553334453200012553032323321233011412999999999865
No 28
>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri}
Probab=91.84 E-value=0.1 Score=29.70 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=65.7
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHH---HHHCCCCCH-----HHHHHCCCCE---------ECC
Q ss_conf 0007-456413677778335688999998763985974257---886788888-----8954015975---------457
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRD---AVDAGFAPN-----DWQIGQTGVT---------VSP 260 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp---~vD~gw~p~-----~~qIG~tG~~---------v~P 260 (318)
|.+| +-++=.|.|+...+.. +.+.+|++.+|.-+-.|-. +.+. .-|+ -..+|+-+.. =..
T Consensus 31 i~~akrP~ii~G~g~~~~~~~-~~l~~~~~~~~iPv~tt~~~kg~~~e-~~p~~~~~~~g~~G~~~~~~~~~~~~~~~~a 108 (170)
T 3cf4_G 31 ISKAKRPLLMVGTLALDPELL-DRVVKISKAANIPIAATGSSLAVLAD-KDVDAKYINAHMLGFYLTDPKWPGLDGNGNY 108 (170)
T ss_dssp HHHCSSEEEEECSTTCCHHHH-HHHHHHHHHHTCCEEECTTTHHHHTT-SSSCEEECCHHHHHHHTTCTTCCCSSSSCCC
T ss_pred HHHCCCCEEEECCCCCCHHHH-HHHHHHHHHHCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 996689899946652506699-99999999859998987000576775-5832015674101234653137777530477
Q ss_pred CEEEEEEECCHHHHH--HHHCCCCEEEEEECCCCCCHHHCCCE----EEECCHHHHHHHHHHCC
Q ss_conf 389999616726455--55168988999766599883102764----57523899999988609
Q gi|254780369|r 261 ELYIAAGISGAIQHI--SGMKDSKVIVSINTDENAPIFKISDY----FIVGDIFKILPEIEKNL 318 (318)
Q Consensus 261 ~lYia~GISGa~qH~--~G~~~s~~IvAIN~D~~ApIf~~ad~----giv~D~~~vlp~l~~~l 318 (318)
||-|++|.+=..+-. ...+....++-||-||+- .+.++| ...+|+.+.|-+|+|+|
T Consensus 109 Dlil~vG~~~~~~~t~~~~~~~~~~~~~I~Id~~~--~~~~~~~~~~~~~~d~~~~L~~lie~L 170 (170)
T 3cf4_G 109 DMIITIGFKKFYINQVLSAAKNFSNLKTIAIERGY--IQNATMSFGNLSKADHYAALDELINAL 170 (170)
T ss_dssp SEEEEESCCHHHHHHHHHHHHHHCCCCEEECSSSC--CTTSSEECCCCCHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 88999577124312130013457883799818430--347732337546999999999999619
No 29
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=91.76 E-value=0.34 Score=26.37 Aligned_cols=92 Identities=14% Similarity=0.008 Sum_probs=47.9
Q ss_pred EEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCH----------HHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf 34899998029758789999999998738934799981892----------68889987078973999944810100012
Q gi|254780369|r 6 MPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNI----------ENIAQQAARIQGVTQVIVAQSTIFRHKLA 75 (318)
Q Consensus 6 M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~----------~~~a~~~~~~~Gad~V~~~~~~~~~~~~~ 75 (318)
|+|||++-|.+...--. --.|.+-.+-|.+|.++++..+. ......+.+..|++.+...+-+...-...
T Consensus 2 ~~VLvi~aHPDDe~lg~-GGtiak~~~~G~~V~vv~~T~G~~g~~~~~~~R~~E~~~a~~~lG~~~~~~L~~~d~~l~~~ 80 (227)
T 1uan_A 2 LDLLVVAPHPDDGELGC-GGTLARAKAEGLSTGILDLTRGEMGSKGTPEEREKEVAEASRILGLDFRGNLGFPDGGLADV 80 (227)
T ss_dssp EEEEEEESSTTHHHHHH-HHHHHHHHHTTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECTTCCCCC
T ss_pred CEEEEEEECCCHHHHHH-HHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
T ss_conf 70899976887478879-99999999869909999973897788988999999998777641544012565578654468
Q ss_pred HHHHHHHHHHCC--CCCEEECCCCC
Q ss_conf 322455787403--45604415781
Q gi|254780369|r 76 GPVSDFVVSIAR--DYKTIMASANA 98 (318)
Q Consensus 76 ~~~a~~l~~~~~--~~~~Vl~~~t~ 98 (318)
......|.++++ +|++|+.++..
T Consensus 81 ~~~~~~l~~~i~~~~PdiV~t~~~~ 105 (227)
T 1uan_A 81 PEQRLKLAQALRRLRPRVVFAPLEA 105 (227)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEECSC
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 8899899999984399689807988
No 30
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=91.43 E-value=0.72 Score=24.28 Aligned_cols=118 Identities=18% Similarity=0.083 Sum_probs=67.6
Q ss_pred HHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEH-H--HHH----CCCCCHHHHHHCCC---CEECCCEEEEEEE
Q ss_conf 000745641367777833568899999876398597425-7--886----78888889540159---7545738999961
Q gi|254780369|r 199 LSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATR-D--AVD----AGFAPNDWQIGQTG---VTVSPELYIAAGI 268 (318)
Q Consensus 199 L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SR-p--~vD----~gw~p~~~qIG~tG---~~v~P~lYia~GI 268 (318)
+..++.++.+|. ++..+.. +.+.+||+.||+-+-.+- . ... ..+.......+... .....++-|.+|-
T Consensus 221 ~~~~~~iii~~g-~~~~~~~-~~l~~lae~l~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~vl~lG~ 298 (578)
T 3lq1_A 221 CTGKKGVFVVGP-IDKKELE-QPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGS 298 (578)
T ss_dssp TTTSCEEEEECS-CCCTTCH-HHHHHHHHHHTCCEEECGGGSTTSBSSCCSSEECCHHHHTTSHHHHHHTCCSEEEEESS
T ss_pred HCCCCEEEEECC-CCCHHHH-HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
T ss_conf 548974999424-4625678-99999998517760321334666677654433564210046898862458788999788
Q ss_pred CCHHHHHHHH---CCCCEEEEEECCCCC-CHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 6726455551---689889997665998-8310276457523899999988609
Q gi|254780369|r 269 SGAIQHISGM---KDSKVIVSINTDENA-PIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 269 SGa~qH~~G~---~~s~~IvAIN~D~~A-pIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
.-......+. ..-..+|-|+.|+.- .-+...+..+.+|...++..|.+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~i~vd~~~~~~~~~~~~~~~i~~d~~~~~~~l~~~~ 352 (578)
T 3lq1_A 299 MPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNM 352 (578)
T ss_dssp CCSCHHHHHHHHHCCSSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 665544456554554204899648521136653333112465888899887524
No 31
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=91.20 E-value=0.43 Score=25.74 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCCEEEEEEECCHHHHHHHH----CCCCEEEEEECCCCCCH---------------H----HCCCEEEECCHHHHHHHHH
Q ss_conf 57389999616726455551----68988999766599883---------------1----0276457523899999988
Q gi|254780369|r 259 SPELYIAAGISGAIQHISGM----KDSKVIVSINTDENAPI---------------F----KISDYFIVGDIFKILPEIE 315 (318)
Q Consensus 259 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApI---------------f----~~ad~giv~D~~~vlp~l~ 315 (318)
+.+|.|.+|-|.+++=.+++ +...-+|.||+|+-.+- | +.-|+-+-||.-+++-+|.
T Consensus 220 ~aDllLViGTSL~V~Paa~Lv~~a~~~~~~vlIN~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~gdcd~~~~~l~ 299 (323)
T 1j8f_A 220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA 299 (323)
T ss_dssp SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 59999998989747788799999981899999979999887741133314565656555676640788168899999999
Q ss_pred HCC
Q ss_conf 609
Q gi|254780369|r 316 KNL 318 (318)
Q Consensus 316 ~~l 318 (318)
+.|
T Consensus 300 ~~l 302 (323)
T 1j8f_A 300 ELL 302 (323)
T ss_dssp HHT
T ss_pred HHC
T ss_conf 975
No 32
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=89.09 E-value=1.1 Score=23.04 Aligned_cols=117 Identities=20% Similarity=0.167 Sum_probs=76.3
Q ss_pred HHHCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCCE---------ECCCEEEEEEE
Q ss_conf 00074-564136777783356889999987639859742578867888888954015975---------45738999961
Q gi|254780369|r 199 LSSAK-IVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGVT---------VSPELYIAAGI 268 (318)
Q Consensus 199 L~~A~-iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~~---------v~P~lYia~GI 268 (318)
|..|+ .|+-+|.|...... .+.++++.++.-+-.|-...+.-+-.|....|..|.. -.+++-|.+|-
T Consensus 202 L~~akrPvIv~G~~~~~~~~---~~~~~~~~~~~pv~~t~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~Dlvl~iG~ 278 (590)
T 1v5e_A 202 LNNSKRPVIYAGIGTMGHGP---AVQELARKIKAPVITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGS 278 (590)
T ss_dssp HHHCSSEEEEECGGGTTCHH---HHHHHHHHHTCCEEECTTCGGGSCTTCTTEEEESSSSSCHHHHHHHHHCSEEEEESC
T ss_pred HHHCCCCEEEEECCCCCCHH---HHHHHHHHCCCCCEECHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC
T ss_conf 98579978999606432369---999998623686010011210001344234676444573899998632572899436
Q ss_pred CCHHHHHHHH-CCCCEEEEEECCCCCCH-HHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 6726455551-68988999766599883-10276457523899999988609
Q gi|254780369|r 269 SGAIQHISGM-KDSKVIVSINTDENAPI-FKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 269 SGa~qH~~G~-~~s~~IvAIN~D~~ApI-f~~ad~giv~D~~~vlp~l~~~l 318 (318)
+-........ .....+|-|+.|+..-- ....++++++|...++..|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~i~Id~d~~~~~~~~~~~~~i~~d~~~~~~~l~~~l 330 (590)
T 1v5e_A 279 NFPFSEVEGTFRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKV 330 (590)
T ss_dssp CCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 7776666655478997899956623100131353555043788999999987
No 33
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=88.84 E-value=0.81 Score=23.96 Aligned_cols=111 Identities=15% Similarity=0.115 Sum_probs=70.5
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEH---HHHHCCCCCHHHHHH--------CCCCEECCCEEEEEEECCH
Q ss_conf 45641367777833568899999876398597425---788678888889540--------1597545738999961672
Q gi|254780369|r 203 KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATR---DAVDAGFAPNDWQIG--------QTGVTVSPELYIAAGISGA 271 (318)
Q Consensus 203 ~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SR---p~vD~gw~p~~~qIG--------~tG~~v~P~lYia~GISGa 271 (318)
+.++-+|.|....+.. ..+.+||+.+|.-+-+|- ...+.. |....| ..-..-.|++.+.+|.+--
T Consensus 206 rpvii~G~~~~~~~~~-~~~~~la~~~~~pv~~t~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~Dlvl~~G~~~~ 281 (563)
T 2uz1_A 206 RPVIVLGSEASRTARK-TALSAFVAATGVPVFADYEGLSMLSGL---PDAMRGGLVQNLYSFAKADAAPDLVLMLGARFG 281 (563)
T ss_dssp SEEEEECHHHHHHTCH-HHHHHHHHHHCCCEEECGGGGGGGTTS---CGGGEEEEGGGGGGTTTTTCCCSEEEEESCCSS
T ss_pred CCEEEECCCCCCHHHH-HHHHHHHHHHCCCEEEEECCCCCCCCC---CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 9889986752300148-999999998599889752112323577---533346410025789987535886887065322
Q ss_pred HHHHHHHC----CCCEEEEEECCCCCCHH-HCCCEEEECCHHHHHHHHHHC
Q ss_conf 64555516----89889997665998831-027645752389999998860
Q gi|254780369|r 272 IQHISGMK----DSKVIVSINTDENAPIF-KISDYFIVGDIFKILPEIEKN 317 (318)
Q Consensus 272 ~qH~~G~~----~s~~IvAIN~D~~ApIf-~~ad~giv~D~~~vlp~l~~~ 317 (318)
.+...+.. ....+|-+|.|+..... ...|+.+++|...++..|.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (563)
T 2uz1_A 282 LNTGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVADVGGTIEALAQA 332 (563)
T ss_dssp GGGTTTSCSSSCTTSEEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHH
T ss_conf 223456555677432001468887882666574155440189999999997
No 34
>3jwp_A Transcriptional regulatory protein SIR2 homologue; malaria, transcription regulation, structural genomics, structural genomics consortium; HET: AMP PGE; 2.65A {Plasmodium falciparum}
Probab=87.25 E-value=0.62 Score=24.73 Aligned_cols=52 Identities=27% Similarity=0.434 Sum_probs=39.9
Q ss_pred CCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHH-HCCCEEEECCHHHHHH
Q ss_conf 7389999616726455551-----689889997665998831-0276457523899999
Q gi|254780369|r 260 PELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIF-KISDYFIVGDIFKILP 312 (318)
Q Consensus 260 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf-~~ad~giv~D~~~vlp 312 (318)
.+|.|.+|-|.++.-...+ +....||-||.+|. |+. .++|+.|.||+-|++|
T Consensus 192 ~DlllviGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~t-~~~~~~~d~~i~g~~~ev~~ 249 (265)
T 3jwp_A 192 CDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKT-YITNKMSDYHVCAKFSELTK 249 (265)
T ss_dssp CSEEEEESCCSSSSHHHHHHHHHHHTTCCEEEEESSCC-SSTTTTCSEEEECCGGGGHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCC-CCCCCCCEEEEECCHHHHHH
T ss_conf 99999989898322888999999860866999839899-99986202999275888999
No 35
>1ytl_A Acetyl-COA decarbonylase/synthase complex epsilon subunit 2; structural genomics, protein structure initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=84.58 E-value=1.1 Score=23.03 Aligned_cols=112 Identities=18% Similarity=0.153 Sum_probs=62.8
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHH----HCCCCCHHH--HHHCCC---C-----EE----C
Q ss_conf 0007-45641367777833568899999876398597425788----678888889--540159---7-----54----5
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAV----DAGFAPNDW--QIGQTG---V-----TV----S 259 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~v----D~gw~p~~~--qIG~tG---~-----~v----~ 259 (318)
|.+| +-|+=.|+|+.+ +. .++ .++++.++.-|-.|-... ..|-+|.++ .+|..| . .+ .
T Consensus 32 i~~AkrPvii~G~g~~~-~~-~e~-~~~~~~~~iPv~tT~~~~~~~~gkg~~~~~hp~~~G~~G~~g~~~~~~a~~~~~~ 108 (174)
T 1ytl_A 32 IKKAKRPLLIVGPDMTD-EM-FER-VKKFVEKDITVVATGSAITRFIDAGLGEKVNYAVLHELTQFLLDPDWKGFDGQGN 108 (174)
T ss_dssp HHHCSSEEEEECSCCCH-HH-HHH-HHHHHTSSSEEEEETTHHHHHHHTTCGGGSEEECHHHHHHHHHSTTCCCTTSSCC
T ss_pred HHHCCCCEEEECCCHHH-HH-HHH-HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99768928996745408-99-999-9999986969996266533423478789999552566611585577899860135
Q ss_pred CCEEEEEEECCHH-----HHHHH-HCCCCEEEEEECCCCCCHHHCCCEE------EECCHHHHHHHHHHCC
Q ss_conf 7389999616726-----45555-1689889997665998831027645------7523899999988609
Q gi|254780369|r 260 PELYIAAGISGAI-----QHISG-MKDSKVIVSINTDENAPIFKISDYF------IVGDIFKILPEIEKNL 318 (318)
Q Consensus 260 P~lYia~GISGa~-----qH~~G-~~~s~~IvAIN~D~~ApIf~~ad~g------iv~D~~~vlp~l~~~l 318 (318)
.||-|++|.+=.. .|.-- ..+.+ +|.|++|. ...+|+. ...|+.+.|-+|+++|
T Consensus 109 aDLil~iG~~~~~~~~~~~~~~~f~~~~k-~I~id~~~----~~~~~~~~p~i~~~~~~~l~~L~~ll~~l 174 (174)
T 1ytl_A 109 YDLVLMLGSIYYHGSQMLAAIKNFAPHIR-ALAIDRYY----HPNADMSFGNLWKKEEDYLKLLDEILAEL 174 (174)
T ss_dssp CSEEEEESCCHHHHHHHHHHHHHHCTTCE-EEECSSSC----CTTSSEECCCCGGGHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCHHHHCCCCHHHCCCCCE-EEEECCCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 78899956756636540565534375675-99988986----53332036314531999999999999639
No 36
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=81.67 E-value=0.68 Score=24.44 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=69.6
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHH--HHHCCC---C------EECCCEEEEE
Q ss_conf 0007-45641367777833568899999876398597425788678888889--540159---7------5457389999
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDW--QIGQTG---V------TVSPELYIAA 266 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~--qIG~tG---~------~v~P~lYia~ 266 (318)
|..| +.++-.|+|....+.. +.+.+|++.+|+-+-++=-. .++.+.++ +.|..+ . .-.+++-|++
T Consensus 197 l~~a~~pvii~G~g~~~~~~~-~~~~~lae~l~~pv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~vi~i 273 (528)
T 1q6z_A 197 LNSASNPAIVLGPDVDAANAN-ADCVMLAERLKAPVWVAPSA--PRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVI 273 (528)
T ss_dssp HHHCSSCEEEECHHHHHTTCH-HHHHHHHHHHTCCEEECSSC--SBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEE
T ss_pred HHHCCCCEEEECCCCCHHHHH-HHHHHHHHHHCCCCEECCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHEEE
T ss_conf 974658726614532023667-67899999743773010234--554468898423476677738887776522013022
Q ss_pred EECCHHHHHHH----HCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHC
Q ss_conf 61672645555----1689889997665998831027645752389999998860
Q gi|254780369|r 267 GISGAIQHISG----MKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKN 317 (318)
Q Consensus 267 GISGa~qH~~G----~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~ 317 (318)
|-+-...+..+ ......++.||.||...-.......+++|...++..|.+.
T Consensus 274 G~~~~~~~~~~~~~~~~~~~~~i~i~~d~~~~~~~~~~~~~~~d~~~~~~~l~~~ 328 (528)
T 1q6z_A 274 GAPVFRYHQYDPGQYLKPGTRLISVTCDPLEAARAPMGDAIVADIGAMASALANL 328 (528)
T ss_dssp SSCTTCCCSCCCSCSSCTTCEEEEEESCHHHHHHCSSSEEEESCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6532332014675455877621264279899566654531143479999999999
No 37
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=79.34 E-value=3.1 Score=20.25 Aligned_cols=112 Identities=17% Similarity=0.175 Sum_probs=67.8
Q ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHH---HHHCCCCCHHHHHHCCCC------EECCCEEEEEEECCHH
Q ss_conf 7456413677778335688999998763985974257---886788888895401597------5457389999616726
Q gi|254780369|r 202 AKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRD---AVDAGFAPNDWQIGQTGV------TVSPELYIAAGISGAI 272 (318)
Q Consensus 202 A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp---~vD~gw~p~~~qIG~tG~------~v~P~lYia~GISGa~ 272 (318)
-+.|+-+|.|.... ..+ +.+|++.++.-+..+.- ..+...-..-..+|..+. ...+++-+.+|-.-..
T Consensus 202 ~~pvi~~G~~~~~~--~~e-l~~~ae~~~~pv~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~l~iG~~~~~ 278 (549)
T 3eya_A 202 SNIALMCGSGCAGA--HKE-LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPY 278 (549)
T ss_dssp CSEEEEECGGGTTC--HHH-HHHHHHHHTCCEEECGGGHHHHSSSCTTBCCCCSTTSCHHHHHHHHHCSEEEEESCCCCC
T ss_pred CCCEEEECCCCCCH--HHH-HHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC
T ss_conf 89889981665526--999-999998657983220234666888786446766776747887765226669998403675
Q ss_pred HHHHHHCCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 4555516898899976659988-310276457523899999988609
Q gi|254780369|r 273 QHISGMKDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 273 qH~~G~~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l 318 (318)
.. -......++-||.||..- -+...|+.+++|+..++.++.+.+
T Consensus 279 ~~--~~~~~~kvi~id~d~~~~~~~~~~~~~l~~d~~~~~~~~~~~~ 323 (549)
T 3eya_A 279 RA--FYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLV 323 (549)
T ss_dssp GG--GSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGS
T ss_pred CC--CCCCCCCEEEEECCHHHHCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf 45--5678882899979989947776786689703888899988765
No 38
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 1zpd_A*
Probab=79.12 E-value=3.2 Score=20.21 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=67.4
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHH--HHHHCCCCEE----------CCCEEEE
Q ss_conf 0007-4564136777783356889999987639859742578867888888--9540159754----------5738999
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPND--WQIGQTGVTV----------SPELYIA 265 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~--~qIG~tG~~v----------~P~lYia 265 (318)
|..| +.++-+|.|....+.+ +.+.+||+.+|+-+-.|-.. .|++|++ ..+|..|..- ..|+-|.
T Consensus 206 l~~a~~pvii~g~g~~~~~~~-~~l~~lae~~~~Pv~tt~~~--~g~~~~~~p~~lG~~~~~~~~~~~~~~l~~~D~vi~ 282 (568)
T 2wvg_A 206 IANRDKVAVLVGSKLRAAGAE-EAAVKFADALGGAVATMAAA--KSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIA 282 (568)
T ss_dssp HTTCCCEEEEECTTTTTTTCH-HHHHHHHHHHCCEEEEEGGG--TTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEE
T ss_pred HHHCCCCEEEECCCCCCCHHH-HHHHHHHHHHCCCEEECCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
T ss_conf 864668658606763420059-99999999867982224466--777766686556763666540899999862675644
Q ss_pred EEECCHHHHHHHHC---CCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 96167264555516---898899976659988310276457523899999988609
Q gi|254780369|r 266 AGISGAIQHISGMK---DSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 266 ~GISGa~qH~~G~~---~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
+|..-......+.. +.+.++-++.|+. .+... +....|+.+++.+|.+++
T Consensus 283 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~l~~l~~~~ 335 (568)
T 2wvg_A 283 LAPVFNDYSTTGWTDIPDPKKLVLAEPRSV-VVNGI--RFPSVHLKDYLTRLAQKV 335 (568)
T ss_dssp ESCCCBTTTTTTTTCCCCTTTEEEECSSEE-EETTE--EEESCCHHHHHHHHHHHC
T ss_pred ECCCCCCCCCCCCCCCCCCCCEEEECCCHH-HHCCC--CCCHHHHHHHHHHHHHHH
T ss_conf 145035424576434688653488336177-63871--253122467999999997
No 39
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein structure initiative, berkeley structural genomics center, BSGC, transferase; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=61.80 E-value=7.7 Score=17.75 Aligned_cols=41 Identities=17% Similarity=0.232 Sum_probs=28.6
Q ss_pred EEEEEEEEC--CCEECHHHHHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 489999802--97587899999999987389347999818926
Q gi|254780369|r 7 PVLLLADYN--QENLSEQTARIVTAAQKISHDIHVLVLGDNIE 47 (318)
Q Consensus 7 ~ilV~~E~~--~g~l~~~slEll~~A~~lg~~v~avv~G~~~~ 47 (318)
|++++.-+. +.......+++..++...+.+|.++..++++-
T Consensus 7 k~l~ii~~~Py~~~~a~eal~~A~a~~a~~~~V~vff~~dGV~ 49 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVY 49 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGG
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 7899977899986789999999999984799779999331888
No 40
>3fxa_A SIS domain protein; YP_013136.1, putative sugar-phosphate isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=55.70 E-value=9.8 Score=17.10 Aligned_cols=55 Identities=22% Similarity=0.356 Sum_probs=25.1
Q ss_pred HHHHHCCCCEECCCEEEEEEECCHHHHHHHH------CCCCEEEEEECCCCCCHHHCCCEEE
Q ss_conf 8954015975457389999616726455551------6898899976659988310276457
Q gi|254780369|r 248 DWQIGQTGVTVSPELYIAAGISGAIQHISGM------KDSKVIVSINTDENAPIFKISDYFI 303 (318)
Q Consensus 248 ~~qIG~tG~~v~P~lYia~GISGa~qH~~G~------~~s~~IvAIN~D~~ApIf~~ad~gi 303 (318)
+.|-++.+..=.-++-|++=-||-...+.-+ +++ .+|+|-..++.|+-+.||+.+
T Consensus 81 ~~~~~~~~~~~~~Dv~I~iS~SG~t~e~i~~~~~ak~~g~-~vI~IT~~~~s~la~~ad~~l 141 (201)
T 3fxa_A 81 DAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGS-TLIGVTENPDSVIAKEADIFF 141 (201)
T ss_dssp HHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTC-EEEEEESCTTSHHHHHCSEEE
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCCEEE
T ss_conf 8899884388978889987899995789999999998398-089983689997534478678
No 41
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=55.49 E-value=3.7 Score=19.79 Aligned_cols=116 Identities=15% Similarity=0.011 Sum_probs=68.1
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHH--HHHC----CCC------EECCCEEEE
Q ss_conf 0007-45641367777833568899999876398597425788678888889--5401----597------545738999
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDW--QIGQ----TGV------TVSPELYIA 265 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~--qIG~----tG~------~v~P~lYia 265 (318)
|.+| +.++-+|.|....+.. +.+.+|++.+|.-+-.|--. .|++|.++ .+|. .+. .-.+++-|.
T Consensus 208 l~~akrpvii~G~g~~~~~a~-~~l~~lae~~~~Pv~~t~~~--~g~~~~~hp~~~G~~~g~~~~~~~~~~l~~aD~vl~ 284 (563)
T 2vk8_A 208 DKDAKNPVILADACCSRHDVK-AETKKLIDLTQFPAFVTPMG--KGSIDEQHPRYGGVYVGTLSKPEVKEAVESADLILS 284 (563)
T ss_dssp HHHCSSEEEEECHHHHHTTCH-HHHHHHHHHHCCCEEECTTT--TTSSCTTSTTEEEECCGGGSCHHHHHHHHTCSEEEE
T ss_pred HHHCCCCCEECCCCCCCHHHH-HHHHHHHHHCCCCCCCCCHH--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf 854679743068875530358-99999987526875356000--257888870014757667651899999745784699
Q ss_pred EEECCHHHHHHHHC---CCCEEEEEECCCCCCH-HHCCCEEEECCHHHHHHHHHHC
Q ss_conf 96167264555516---8988999766599883-1027645752389999998860
Q gi|254780369|r 266 AGISGAIQHISGMK---DSKVIVSINTDENAPI-FKISDYFIVGDIFKILPEIEKN 317 (318)
Q Consensus 266 ~GISGa~qH~~G~~---~s~~IvAIN~D~~ApI-f~~ad~giv~D~~~vlp~l~~~ 317 (318)
+|-+-...+..+.. ....|+-|+.|+.-.- .-..+..+.+|+.++++.|.+.
T Consensus 285 lG~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 340 (563)
T 2vk8_A 285 VGALLSDFNTGSFSYSYKTKNIVEFHSDHMKIRNATFPGVQMKFVLQKLLTTIADA 340 (563)
T ss_dssp ESCCCCTTTTTTTCCCCCCSCEEEECSSEEEETTEEEETCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
T ss_conf 98604653268766445564365316508763566566365266899999998876
No 42
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=53.36 E-value=11 Score=16.86 Aligned_cols=288 Identities=14% Similarity=0.102 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHH
Q ss_conf 99999999987389347999818926888998707897399994481010001232245578740345604415781034
Q gi|254780369|r 22 QTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASANAMGK 101 (318)
Q Consensus 22 ~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~t~~Gr 101 (318)
.+--++..-+++|-+.-..+.|.....+.+.+.+ .+. +.+.+.|+.-.-|.+..|+++ -.++.+++..+.+---
T Consensus 13 Ga~~l~~~L~~~Gv~~vf~~pG~~~~~l~~al~~-~~i-~~i~~~~E~~A~~~A~G~ar~----tg~~~v~~~tsG~g~~ 86 (566)
T 1ozh_A 13 GADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLD-SSI-RIIPVRHEANAAFMAAAVGRI----TGKAGVALVTSGPGCS 86 (566)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTTHHHHHHGGG-SSS-EEEECSSHHHHHHHHHHHHHH----HSSCEEEEECSTHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-CCC-EEEEECCHHHHHHHHHHHHHH----HCCCEEEEECCCHHHH
T ss_conf 9999999999879989999789666999999986-699-299048889999999999999----7998899983147899
Q ss_pred HHHHHH-HHHC-CCCEECCCEEECCCCE-------E-EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC-CEE
Q ss_conf 467888-8751-7741013202246872-------7-974106952689997798427995168643333556666-615
Q gi|254780369|r 102 DILPRV-AAML-DVMQVSEVIEIISPKI-------F-KRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKVA-SIH 170 (318)
Q Consensus 102 dlaprl-AarL-~~~~vsdvv~i~~~~~-------~-~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~~-~v~ 170 (318)
.+.|-+ .+.. +.|++-=+-+...... . ....|..-..........-.+..+-..+|..+.. .+.+ -..
T Consensus 87 N~l~a~~eA~~~~~Pli~itg~~~~~~~~~~~~q~~~~~~~~~~~~k~~~~~~~~~~~~~~l~~A~~~a~~-~~~gpv~i 165 (566)
T 1ozh_A 87 NLITGMATANSEGDPVVALGGAVKRADKAKQVHQSMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQ-GRPGSAFV 165 (566)
T ss_dssp TTHHHHHHHHHHTCCEEEEEEECCTTTC------CCCHHHHHGGGCSEEEECCSGGGHHHHHHHHHHHHHS-SSCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCCCEEE
T ss_conf 99999999996299889998989734436676530110135345253101158888999999999998860-89977782
Q ss_pred EEECCCCCCCCEE----EEEEEEEECCCCCCC-------HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHH
Q ss_conf 6211102445302----588544431456667-------0007-456413677778335688999998763985974257
Q gi|254780369|r 171 KISAEVLEKYISN----TRFIKEERTSLSPTD-------LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRD 238 (318)
Q Consensus 171 ~~~~~~~~~~~~~----~~~i~~~~~~~~~v~-------L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp 238 (318)
.+..+........ ..... ........+ |..| +-++-.|.|....+... .+.+|++.+|+-+-.+..
T Consensus 166 ~~p~d~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~l~~a~~P~ii~G~~~~~~~~~~-~l~~la~~~~~pv~~~~~ 243 (566)
T 1ozh_A 166 SLPQDVVDGPVSGKVLPASGAP-QMGAAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSK-ALRRLLETSHIPVTSTYQ 243 (566)
T ss_dssp EEEHHHHHSCEEECCCCCCCSC-EECCSCHHHHHHHHHHHHHCSSEEEEECGGGGSGGGHH-HHHHHHHHHCCCEEECGG
T ss_pred CCCHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHCCCCCEECCC
T ss_conf 5845665164443345544567-77889989999999999847698402688654521157-788776522886210233
Q ss_pred HHHCCC-CCHHHHHHCCCC---------EECCCEEEEEEECCHHHHHHHH-CCCCEEEEEECCCCCCH-HHCCCEEEECC
Q ss_conf 886788-888895401597---------5457389999616726455551-68988999766599883-10276457523
Q gi|254780369|r 239 AVDAGF-APNDWQIGQTGV---------TVSPELYIAAGISGAIQHISGM-KDSKVIVSINTDENAPI-FKISDYFIVGD 306 (318)
Q Consensus 239 ~vD~gw-~p~~~qIG~tG~---------~v~P~lYia~GISGa~qH~~G~-~~s~~IvAIN~D~~ApI-f~~ad~giv~D 306 (318)
.-+.-- -.+....|..|. ...+++.+.+|-+=........ ..-+.++-++.|+...= +...|+.+.+|
T Consensus 244 ~~g~~~~~~~~~~~g~~g~~~~~~~~~~~~~~D~il~~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~ 323 (566)
T 1ozh_A 244 AAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNSGNATLVHIDVLPAYEERNYTPDVELVGD 323 (566)
T ss_dssp GTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEESCCGGGSCGGGTCCSCSEEEEEESSCCCCBTTBCCSEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCEEEEHH
T ss_conf 36764456653123146876886762356503157764865666676545556760699832355423577765133104
Q ss_pred HHHHHHHHHHCC
Q ss_conf 899999988609
Q gi|254780369|r 307 IFKILPEIEKNL 318 (318)
Q Consensus 307 ~~~vlp~l~~~l 318 (318)
...++.+|.+.|
T Consensus 324 ~~~~l~~L~~~l 335 (566)
T 1ozh_A 324 IAGTLNKLAQNI 335 (566)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999986
No 43
>2poc_A D-fructose-6-, isomerase domain of glutamine-fructose-6- phosphate transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans SC5314} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=48.08 E-value=9.6 Score=17.13 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=16.6
Q ss_pred CHHHCCEEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 70007456413677778335688999998763
Q gi|254780369|r 198 DLSSAKIVISGGKSFGSMENFHKLLLPLAKKL 229 (318)
Q Consensus 198 ~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~L 229 (318)
.+.+++.++-.|||. ++. .+.|.|-++
T Consensus 218 ~~~~~~~~~~lG~G~----~~g-~A~E~aLK~ 244 (367)
T 2poc_A 218 SLNDQKSLLLLGRGY----QFA-TALEGALKI 244 (367)
T ss_dssp GGGGCSEEEEEECGG----GHH-HHHHHHHHH
T ss_pred HHHCCCCEEEECCCC----CHH-HHHHHHHHH
T ss_conf 763465079964853----479-999999999
No 44
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=47.18 E-value=13 Score=16.25 Aligned_cols=118 Identities=19% Similarity=0.102 Sum_probs=68.0
Q ss_pred HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHH-CCCCCHHHHHHCCC---------CEECCCEEEEEE
Q ss_conf 0007-456413677778335688999998763985974257886-78888889540159---------754573899996
Q gi|254780369|r 199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVD-AGFAPNDWQIGQTG---------VTVSPELYIAAG 267 (318)
Q Consensus 199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD-~gw~p~~~qIG~tG---------~~v~P~lYia~G 267 (318)
|..| +.|+-+|+|... .... .+.+||+.+|.-+-++--.-. .+-.++...+|..+ ....+++.+.+|
T Consensus 240 l~~akrpvii~G~~~~~-~~~~-~~~~lae~~~~pv~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~g 317 (604)
T 2x7j_A 240 LAEAEKGMIVCGELHSD-ADKE-NIIALSKALQYPILADPLSNLRNGVHDKSTVIDAYDSFLKDDELKRKLRPDVVIRFG 317 (604)
T ss_dssp HHHCSSEEEEECCCCCH-HHHH-HHHHHHHHHTCCEEECGGGTTTBSSSCCTTEECCHHHHTTSHHHHHHHCCSEEEEES
T ss_pred HHHCCCCEEEECCCCCH-HHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCEEEEEEC
T ss_conf 97278989996573306-5688-988789875265411122366667888742033454221268888524651999935
Q ss_pred ECCHHHHHHHH---CCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 16726455551---6898899976659988-310276457523899999988609
Q gi|254780369|r 268 ISGAIQHISGM---KDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 268 ISGa~qH~~G~---~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l 318 (318)
-.-....+... .....++-++.|+.-. -+...+..+++|...++.+|.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~~d~~~~l~~l~~~l 372 (604)
T 2x7j_A 318 PMPVSKPVFLWLKDDPTIQQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGL 372 (604)
T ss_dssp SCCSCHHHHHHHHHCTTSEEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTS
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 7776555432334578641464158766606764552001356999999999752
No 45
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=41.47 E-value=15 Score=15.91 Aligned_cols=113 Identities=7% Similarity=-0.067 Sum_probs=59.8
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCCE----------ECCCEEEEEEECCHH
Q ss_conf 4564136777783356889999987639859742578867888888954015975----------457389999616726
Q gi|254780369|r 203 KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGVT----------VSPELYIAAGISGAI 272 (318)
Q Consensus 203 ~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~~----------v~P~lYia~GISGa~ 272 (318)
+.++-+|+|........ .+.+||+++|.-+-.|-..-..---.+....|..|.. -.+++-+.+|-.-..
T Consensus 211 rpvii~G~g~~~~~~~~-~l~~lae~~~~pv~~t~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~l~~~dlil~~g~~~~~ 289 (552)
T 1ovm_A 211 RTALLADFLVLRHGLKH-ALQKWVKEVPMAHATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTD 289 (552)
T ss_dssp CEEEEECHHHHHTTCHH-HHHHHHHHSCCEEEECGGGTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEESCCCCT
T ss_pred CCEEECCCCEECCCCHH-HHHHHHHHCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCC
T ss_conf 75796176310342279-99999986168711114553010267642356556666778999997164421130223553
Q ss_pred HHHHHHC---CCCEEEEEECCCCCCH-HHCCCEEEECCHHHHHHHHHH
Q ss_conf 4555516---8988999766599883-102764575238999999886
Q gi|254780369|r 273 QHISGMK---DSKVIVSINTDENAPI-FKISDYFIVGDIFKILPEIEK 316 (318)
Q Consensus 273 qH~~G~~---~s~~IvAIN~D~~ApI-f~~ad~giv~D~~~vlp~l~~ 316 (318)
.-..+.. ....++-|+.|+.--= ....|+.+.+|+..++..+.+
T Consensus 290 ~~~~~~~~~~~~~~~i~i~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~ 337 (552)
T 1ovm_A 290 TLTAGFTHQLTPAQTIEVQPHAARVGDVWFTGIPMNQAIETLVELCKQ 337 (552)
T ss_dssp TTTTTTCCCCCTTTEEEECSSEEEETTEEEESCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 100365545541112101687888564214672177769999999987
No 46
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=39.25 E-value=18 Score=15.47 Aligned_cols=92 Identities=10% Similarity=0.114 Sum_probs=57.0
Q ss_pred ECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH--HHHHHHCC--CC
Q ss_conf 029758789999999998738934799981892688899870789739999448101000123224--55787403--45
Q gi|254780369|r 14 YNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVS--DFVVSIAR--DY 89 (318)
Q Consensus 14 ~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a--~~l~~~~~--~~ 89 (318)
=.-|.+...||+++..-. .=++.++..+.+.+.+.+++.++ ....|...+...+..+..+.+. +.+.++++ +.
T Consensus 10 GSTGSIG~~tL~Vi~~~~--~f~v~~Lsa~~N~~~L~~q~~~f-~p~~v~i~~~~~~~~~~~~~~~g~~~l~~~~~~~~~ 86 (376)
T 3a06_A 10 GATGSIGTQTLDVLKKVK--GIRLIGISFHSNLELAFKIVKEF-NVKNVAITGDVEFEDSSINVWKGSHSIEEMLEALKP 86 (376)
T ss_dssp TTTSHHHHHHHHHHHHSC--SEEEEEEEESSCHHHHHHHHHHH-TCCEEEECSSCCCCCSSSEEEESTTHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCC--CCEEEEEECCCCHHHHHHHHHHC-CCCEEEECCHHHHHHHCCCEECCHHHHHHHHCCCCC
T ss_conf 877099999999982289--96599997798899999999982-999999958899765087150486679998456788
Q ss_pred CEEECCCCCHHHHHHHHHHH
Q ss_conf 60441578103446788887
Q gi|254780369|r 90 KTIMASANAMGKDILPRVAA 109 (318)
Q Consensus 90 ~~Vl~~~t~~GrdlaprlAa 109 (318)
++|+.+-+=. .-|-|.+++
T Consensus 87 D~vv~Ai~G~-aGL~pt~~a 105 (376)
T 3a06_A 87 DITMVAVSGF-SGLRAVLAS 105 (376)
T ss_dssp SEEEECCCST-THHHHHHHH
T ss_pred CEEEEECCHH-HHCHHHHHH
T ss_conf 7899954123-103257777
No 47
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependent, hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 3dfk_A* 3dfm_A
Probab=38.08 E-value=18 Score=15.36 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=20.9
Q ss_pred EEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 4899998029758789999999998738934799981
Q gi|254780369|r 7 PVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLG 43 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G 43 (318)
+|||++-|.+...-.. --+|....+-|.+|.+|++-
T Consensus 9 rvLvv~pHPDDe~l~~-Ggtl~~~~~~G~~V~vv~~T 44 (273)
T 3dff_A 9 RLLAISPHLDDAVLSF-GAGLAQAAQDGANVLVYTVF 44 (273)
T ss_dssp EEEEEESSTTHHHHHH-HHHHHHHHHTTCEEEEEETT
T ss_pred EEEEEEECCCHHHHHH-HHHHHHHHHCCCCEEEEEEC
T ss_conf 6999976873688988-99999999779948999976
No 48
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=37.42 E-value=19 Score=15.29 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=27.4
Q ss_pred EE-EEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 34-8999980297587899999999987389347999818
Q gi|254780369|r 6 MP-VLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGD 44 (318)
Q Consensus 6 M~-ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~ 44 (318)
|+ |++..-.+ -++.+-+++|-.|+++|+.+.+.+..+
T Consensus 1 Mk~V~~~G~FD--~lH~GH~~~l~~Ak~~gd~liV~v~~D 38 (129)
T 1coz_A 1 MKKVITYGTFD--LLHWGHIKLLERAKQLGDYLVVAISTD 38 (129)
T ss_dssp CCEEEEEECCC--SCCHHHHHHHHHHHTTSSEEEEEEECH
T ss_pred CCEEEEEEEEC--CCCHHHHHHHHHHHHHCCEEEEEEECC
T ss_conf 93999934548--799899999999997299899997067
No 49
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=33.42 E-value=22 Score=14.89 Aligned_cols=85 Identities=19% Similarity=0.152 Sum_probs=46.2
Q ss_pred EE-EEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCH------------HHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 34-899998029758789999999998738934799981892------------68889987078973999944810100
Q gi|254780369|r 6 MP-VLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNI------------ENIAQQAARIQGVTQVIVAQSTIFRH 72 (318)
Q Consensus 6 M~-ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~------------~~~a~~~~~~~Gad~V~~~~~~~~~~ 72 (318)
|| +++..-.+ -++.+-+++|..|+++|+.+.+.+..+.. ++-...+..+..+|.|+..+....
T Consensus 1 MK~V~~~G~FD--~lH~GHi~~l~~Ak~~gd~liV~v~~D~~~~~~k~~p~~~~~~R~~~l~~l~~Vd~v~~~~~~~~-- 76 (132)
T 2b7l_A 1 MKRVITYGTYD--LLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQ-- 76 (132)
T ss_dssp CCEEEEEECCC--SCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGG--
T ss_pred CCEEEEEEEEC--CCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCC--
T ss_conf 93999922678--89989999999999729999999816556553148885608999877400577889998045224--
Q ss_pred HHHHHHHHHHHHHCCCCCEEECCCCCHHH
Q ss_conf 01232245578740345604415781034
Q gi|254780369|r 73 KLAGPVSDFVVSIARDYKTIMASANAMGK 101 (318)
Q Consensus 73 ~~~~~~a~~l~~~~~~~~~Vl~~~t~~Gr 101 (318)
..+.+.+ -+|++++.+..+.+.
T Consensus 77 -----~~~~i~~--~~~d~~v~G~d~~~~ 98 (132)
T 2b7l_A 77 -----KEDDVEK--FDVDVFVMGHDWEGE 98 (132)
T ss_dssp -----HHHHHHH--TTCCEEEECGGGTTT
T ss_pred -----HHHHHHH--HCCCEEEECCCCCCH
T ss_conf -----6999997--299799985886660
No 50
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=26.24 E-value=29 Score=14.11 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=19.7
Q ss_pred EEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 4899998029758789999999998738934799981
Q gi|254780369|r 7 PVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLG 43 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G 43 (318)
+|||+.- |.| ..|+.-+|++||-++.++-..
T Consensus 13 kvlIiG~---Gql---gr~~a~Aak~lG~~v~~~~~~ 43 (391)
T 1kjq_A 13 RVMLLGS---GEL---GKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp EEEEESC---SHH---HHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECC---CHH---HHHHHHHHHHCCCEEEEEECC
T ss_conf 9999897---899---999999999879989999799
No 51
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP, structural genomics; HET: ATP; 2.50A {Thermococcus kodakarensis KOD1} SCOP: c.30.1.8 d.142.1.9
Probab=26.10 E-value=29 Score=14.10 Aligned_cols=120 Identities=13% Similarity=0.048 Sum_probs=66.8
Q ss_pred EEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHH--------H
Q ss_conf 23489999802975878999999999873893479998189268889987078973999944810100012--------3
Q gi|254780369|r 5 DMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLA--------G 76 (318)
Q Consensus 5 ~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~--------~ 76 (318)
||+|-+++-| ++++++-.||++|-+.- ++..++.+.. ...+.-+|++|..++-. +.-.+ .
T Consensus 2 ~~~i~~~~sh-------sa~~i~~~Ak~~G~~Tv-~i~~~~~e~~---~~~~~~aDe~~~~e~~~-~i~~~~~I~~~~g~ 69 (320)
T 2pbz_A 2 SLIVSTIASH-------SSLQILLGAKKEGFKTR-LYVSPKRRPF---YSSLPIVDDLVVAEEMT-SILNDDGIVVPHGS 69 (320)
T ss_dssp --CEEEESST-------THHHHHHHHHHTTCCEE-EEECTTTHHH---HHTCTTCSEEEECSCSC-CTTCCSSBCCCBTT
T ss_pred CCEEEEEEEH-------HHHHHHHHHHHCCCEEE-EEECCCCCCC---CCCCCCCCEEEEHHHHH-HHHCCCEEECCCCC
T ss_conf 7289999747-------89999999998399599-9977885434---68835287898755699-88499989968786
Q ss_pred HHHHHHHHHCCCCCEEECCCC-----CHHHHHHHHHHHHCCCCEECCCEEECC---CCEEEEEEECCC
Q ss_conf 224557874034560441578-----103446788887517741013202246---872797410695
Q gi|254780369|r 77 PVSDFVVSIARDYKTIMASAN-----AMGKDILPRVAAMLDVMQVSEVIEIIS---PKIFKRPSYTGN 136 (318)
Q Consensus 77 ~~a~~l~~~~~~~~~Vl~~~t-----~~GrdlaprlAarL~~~~vsdvv~i~~---~~~~~rp~fgG~ 136 (318)
......++.+++..+.++++. ..-|+..-++..+++.+.......... --++.||.|++.
T Consensus 70 ~~~~~~~~~le~~gi~~~G~~~~l~~~~dk~~~~~~l~~~GIp~p~~~~~~~~~ig~PViVKp~~g~G 137 (320)
T 2pbz_A 70 FVAYLGIEAIEKAKARFFGNRRFLKWETTFELQDKALEGAGIPRVEVVEPEDAKPDELYFVRIEGPRG 137 (320)
T ss_dssp HHHHSCHHHHHTCCSCCBSCSSGGGGGSCHHHHHHHHHHHTCCBCCBCCSCCCCSSCCEEEECC----
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEECCCCC
T ss_conf 78999999999869972586899998778999999999769997654453100268747999755788
No 52
>3etn_A Putative phosphosugar isomerase involved in capsule formation; YP_209877.1, structural genomics; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=26.02 E-value=29 Score=14.09 Aligned_cols=59 Identities=20% Similarity=0.344 Sum_probs=34.0
Q ss_pred CHHHHHHCCCCEECCCEEEEEEECCHHHHHHHH----C---CCCEEEEEECCCCCCHHHCCCEEEE
Q ss_conf 888954015975457389999616726455551----6---8988999766599883102764575
Q gi|254780369|r 246 PNDWQIGQTGVTVSPELYIAAGISGAIQHISGM----K---DSKVIVSINTDENAPIFKISDYFIV 304 (318)
Q Consensus 246 p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~----~---~s~~IvAIN~D~~ApIf~~ad~giv 304 (318)
+.+.|.+..+..=+-++.|++=-||....+.-+ + .-=.+|+|-.+|+.|+-++||+.+.
T Consensus 93 d~~~~~~~~~~~~~~DvlI~iS~SG~T~evi~~~~~ak~~~~~~~vI~IT~~~~S~lak~aD~~L~ 158 (220)
T 3etn_A 93 PSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLS 158 (220)
T ss_dssp TTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred CHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE
T ss_conf 177888885158888889998289986658888999874046871588860588742135887886
No 53
>3ic3_A Putative pyruvate dehydrogenase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE BGC; 1.80A {Rhodopseudomonas palustris}
Probab=25.07 E-value=30 Score=13.97 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=20.1
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 45641367777833568899999876
Q gi|254780369|r 203 KIVISGGKSFGSMENFHKLLLPLAKK 228 (318)
Q Consensus 203 ~iVVsgGRGi~~~enf~~l~~~LA~~ 228 (318)
-.=||-.||+.++++|..|+.+||.-
T Consensus 34 glhVsl~~~~d~p~~WG~LLaDlArH 59 (101)
T 3ic3_A 34 GLSIAFMRAFEDPEMWGLLLVDIARH 59 (101)
T ss_dssp EEEEEECSCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 63898515766788999999999999
No 54
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=22.02 E-value=35 Score=13.60 Aligned_cols=116 Identities=14% Similarity=0.119 Sum_probs=55.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHH-HHHHHHHHHHH---CCC-CCEEECCCCCHHHHHHHHHH
Q ss_conf 89347999818926888998707897399994481010001-23224557874---034-56044157810344678888
Q gi|254780369|r 34 SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKL-AGPVSDFVVSI---ARD-YKTIMASANAMGKDILPRVA 108 (318)
Q Consensus 34 g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~-~~~~a~~l~~~---~~~-~~~Vl~~~t~~GrdlaprlA 108 (318)
-+.+..-++..+.++..+-.-...|- -++-+-. .+|. .|.-.+.+.+. +.. .++=|-+.++.-.....++|
T Consensus 34 ~drv~lNVLAkd~eNAkei~eAaeGh-v~vGVLs---kny~tvEeav~~mk~y~~~~~~avSVGLGaGDp~Q~~~Va~IA 109 (275)
T 3m6y_A 34 KGRVALNVLANNIENAKDIFEAAEGY-VVVGVLS---KDYPTVEEAVTAMKAYGKEIDDAVSIGLGAGDNRQAAVVAEIA 109 (275)
T ss_dssp TTTBCEEEECSSHHHHHHHHHHTTTC-EEEEEEG---GGSSSHHHHHHHHHHHHHHTTTCEEEECCTTCGGGHHHHHHHT
T ss_pred CCEEEEEEECCCHHHHHHHHHHHCCC-EEEEEEE---CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 06057653038754199999874586-7988860---7789789999999999985478648852899979999999999
Q ss_pred HHCCCCEECCCEEECCCCEEEEEEECCC---EEEEEEECCCCEEEEECCCC
Q ss_conf 7517741013202246872797410695---26899977984279951686
Q gi|254780369|r 109 AMLDVMQVSEVIEIISPKIFKRPSYTGN---IIQTIETTDTYQIITIRAIA 156 (318)
Q Consensus 109 arL~~~~vsdvv~i~~~~~~~rp~fgG~---~~a~v~~~~~~~viTvr~~s 156 (318)
++.+-..+..+..- -.++|-..|.+ +.+-+..+..|-.+-+..|-
T Consensus 110 ~~~~P~HVNQvFt~---ag~tra~Lg~~~T~VNaLvsPTG~~G~VkISTGp 157 (275)
T 3m6y_A 110 KHYPGSHINQVFPS---VGATRANLGEKDSWINSLVSPTGKVGYVNISTGP 157 (275)
T ss_dssp TTCCCSEECCBGGG---HHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCST
T ss_pred HHCCCCCCCCCCCC---HHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCC
T ss_conf 87397654641541---2666664278651676666588875358935776
Done!