HHSEARCH alignment of GI: 254780369 and SCOP domain: d1efpa1

Alignment
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=100.00  E-value=3.4e-37  Score=253.90  Aligned_cols=181  Identities=34%  Similarity=0.563  Sum_probs=163.3

Q ss_pred             EEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC
Q ss_conf             48999980297587899999999987389347999818926888998707897399994481010001232245578740
Q gi|254780369|r    7 PVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIA   86 (318)
Q Consensus         7 ~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~   86 (318)
                      +||||+||++|+|++.++|++++|++++++++++++|.+.+..+.++.+++|+++||.++++.+.+|.++.++.++....
T Consensus         1 sVLV~aE~~~g~l~~~s~~~~~aAa~~~g~v~~lv~g~~~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~a~~~~~~~   80 (183)
T d1efpa1           1 AVLLLGEVTNGALNRDATAKAVAAVKALGDVTVLCAGASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLA   80 (183)
T ss_dssp             CEEEECCBSSSCBCHHHHHHHHHHHGGGSCEEEEEEETTCHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHC
T ss_conf             98999994699988999999999998179965999888843778887625773199990780431331466666777534


Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             34560441578103446788887517741013202246872797410695268999779842799516864333355666
Q gi|254780369|r   87 RDYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKV  166 (318)
Q Consensus        87 ~~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~  166 (318)
                      ++|++||+++|++|||++||||+|||+++++||+++.++.+++||+|+||++++++++++++|+|+|||+|++.+ .+++
T Consensus        81 ~~~~~vl~~~t~~GrdlaprlAa~l~~~~isdvv~i~~~~~~~Rp~y~Gk~~~~v~~~~~~~iitvr~~af~~~~-~~~~  159 (183)
T d1efpa1          81 GDYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAG-EGGT  159 (183)
T ss_dssp             TTCSEEEEESSHHHHHHHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCCC-SSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCC-CCCC
T ss_conf             365559971783099999998787752566676305899849999976823788761799879998898668777-7998


Q ss_pred             CCEEEEECCCCCCCCEEEEEEEEEE
Q ss_conf             6615621110244530258854443
Q gi|254780369|r  167 ASIHKISAEVLEKYISNTRFIKEER  191 (318)
Q Consensus       167 ~~v~~~~~~~~~~~~~~~~~i~~~~  191 (318)
                      ++++.++......   .+++++++.
T Consensus       160 ~~v~~~~~~~~~~---~~~~v~~e~  181 (183)
T d1efpa1         160 APVTETAAAADPG---LSSWVADEV  181 (183)
T ss_dssp             CCCBCCCCCCCCC---SEEEEEEEE
T ss_pred             CCEEECCCCCCCC---CCEEEHHHH
T ss_conf             7569816888876---436741543


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ETFP subunits
domain: Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]