HHsearch alignment for GI: 254780370 and conserved domain: cd01362

>cd01362 Fumarase_classII Class II fumarases. This group contains proteins similar to Escherichia coli fumarase C and the human mitochondrial fumarase. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00  E-value=0  Score=526.67  Aligned_cols=409  Identities=20%  Similarity=0.256  Sum_probs=344.9

Q ss_pred             HHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf             3320332384346999984255-078999999999999999999998799998999999999999996664598001566
Q gi|254780370|r   11 NQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD   89 (473)
Q Consensus        11 ~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~   89 (473)
T Consensus        15 ~~~yG----~qT~Ra~~NF~is~~~~~~~~I~a~~~vK~AaA~aN~~~G~L~~~~~~aI~~A~~ei~~g~~~~~F~vd~~   90 (455)
T cd01362          15 DALWG----AQTQRSLENFPIGGERMPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIAGKLDDHFPLVVW   90 (455)
T ss_pred             CCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             56326----99999996749889889999999999999999999998599999999999999999984997135145200


Q ss_pred             CC----HHHHHHHHHHHHHH----H-CCC--CCCC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             46----37999999997311----1-023--4201------441011237887999999999-99986778899999744
Q gi|254780370|r   90 LE----DIHMNIEARLTSLI----G-SIA--GKMH------TARSRNDQVALDLRLWIKEKT-LEITNDLKKLLTILLDK  151 (473)
Q Consensus        90 ~e----dvh~~iE~~l~~~~----G-~~~--~~lH------~grSrND~~~t~~rl~lr~~l-~~l~~~l~~l~~~L~~~  151 (473)
T Consensus        91 Q~GaGTstNMN~NEViAn~A~e~~g~~~g~~~~vhPndhVN~~QStND~~PTA~~ia~~~~l~~~L~~~l~~L~~~L~~K  170 (455)
T cd01362          91 QTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLPALKHLIDALDAK  170 (455)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             06887633240999999999998476678888769300100234667642279999999999999999999999999999


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHH
Q ss_conf             77301452001665301133444567888888786206989998745423356532033566678998-------96310
Q gi|254780370|r  152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKE  224 (473)
Q Consensus       152 A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~  224 (473)
T Consensus       171 a~e~~~~vk~GRTHLQdA~PiTlGq~f~a~a~~l~r~~~RL~~a~~~l~~~~lGGtAv-GTG~n~~~~f~~~~~~~L~~~  249 (455)
T cd01362         171 ADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAV-GTGLNAHPGFAEKVAAELAEL  249 (455)
T ss_pred             HHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHHHHHHH
T ss_conf             9984477400541363476600899999999989999999999999999860577443-478788812679999999886


Q ss_pred             CCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             3876-434785673027886424677768876648999999999841---245615404554565300444336013899
Q gi|254780370|r  225 LGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAEL  300 (473)
Q Consensus       225 LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~  300 (473)
T Consensus       250 tgl~~~~a~n~~~a~~~~D~~ve~s~~L~~lA~~L~KIanDirll~SGPr~gl~Ei~lP-~~q~GSSIMPgKvNPv~~E~  328 (455)
T cd01362         250 TGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLP-ENEPGSSIMPGKVNPTQCEA  328 (455)
T ss_pred             HCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCCCCCCCCCCCCCCHHHHH
T ss_conf             29997116878999848709999999999999999999999999827765684355479-99997787899879889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHH
Q ss_conf             87668999752335876740484000010010055798899999986567652-30586665210121123784439999
Q gi|254780370|r  301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDL  379 (473)
Q Consensus       301 ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~l  379 (473)
T Consensus       329 v~~v~~~ViGnd~ti~~a~~~G~~ELNv~~Plia~~ll~si~lL~~~~~~f~~~~i~gi~vn~e~~~~~l~~S~~l~TaL  408 (455)
T cd01362         329 LTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELLERSLMLVTAL  408 (455)
T ss_pred             HHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCHHHHHHH
T ss_conf             99999999665999998663530566422838999888899999999999999987658888999999998574389883


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf             999998539997999999999999999829896898999999400113268999659999
Q gi|254780370|r  380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVES  439 (473)
Q Consensus       380 Ad~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~  439 (473)
T Consensus       409 ~p~i----------GY~~aa~iak~A~~~g~slrev~le~----~~ls~eeld~lldP~~  454 (455)
T cd01362         409 NPHI----------GYDKAAKIAKKAHKEGLTLKEAALEL----GYLTEEEFDRLVDPEK  454 (455)
T ss_pred             HHHH----------HHHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHCCCCC
T ss_conf             2376----------39999999999999399899999885----9999999998659212