>cd01597 pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like This group contains proteins similar to pCLME, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.

Probab=100.00 E-value=0 Score=610.65 Aligned_cols=424 Identities=22% Similarity=0.224 Sum_probs=365.6 Q ss_pred CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 64223202333203323843469999842550789999999999999999999987999989999999999999966645 Q gi|254780370|r 2 SKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVD 81 (473) Q Consensus 2 ~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~ 81 (473) T Consensus 3 ~~~y~~~e~~~i~s--------------------~~~~i~~~~~ve~A~A~a~~~lG~ip~~~a~~I~~a~~~~~~d~~~ 62 (437) T cd01597 3 GDLFGTPAMREIFS--------------------DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVERLDLEA 62 (437) T ss_pred CCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH T ss_conf 43338899998729--------------------1999999999999999999876999999999999872764679999 Q ss_pred CCEECCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 98001566463799999999731110-23420144101123788799999999999986778899999744773014520 Q gi|254780370|r 82 GSFVFSRDLEDIHMNIEARLTSLIGS-IAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 (473) Q Consensus 82 ~~~~~~~~~edvh~~iE~~l~~~~G~-~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m 160 (473) T Consensus 63 ~~~~~~~~~~~v-~a~v~~l~~~~~~~~g~~vH~G~TsnDv~~Ta~~l~l~~~~~~l~~~l~~l~~~L~~~A~~~~~~~~ 141 (437) T cd01597 63 LAEATARTGHPA-IPLVKQLTAACGDAAGEYVHWGATTQDIIDTALVLQLRDALDLLERDLDALLDALARLAATHRDTPM 141 (437) T ss_pred HHHHHHHCCCCH-HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE T ss_conf 999998728828-9999999985681302755799785313866999999988999999999999999999998259820 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHCCCCCCCCCHHH Q ss_conf 016653011334445678888887862069899987454233565320335666789----9896310387643478567 Q gi|254780370|r 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID----RHFTAKELGFREPTRNSID 236 (473) Q Consensus 161 pg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id----r~~~a~~LGf~~~~~ns~d 236 (473) T Consensus 142 ~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lgGAvGt~~~~~~~~~~~~~~~a~~Lgl~~~~~~--- 218 (437) T cd01597 142 VGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEALAAELGLGVPAIP--- 218 (437) T ss_pred ECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC--- T ss_conf 14446741343419999999999999999999999997764356766454545786379999999999489999986--- Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 3027886424677768876648999999999841245615404554-565300444336013899876689997523358 Q gi|254780370|r 237 SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF-STGSSIMPQKRNPDGAELVRAKTGRINGALLSL 315 (473) Q Consensus 237 av~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~-~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~ 315 (473) T Consensus 219 ~~~~rd~~~e~~~~l~~la~~L~kia~Di~ll~~~~~gei~~p~~~~~~GSS~MP~K~NPv~~E~v~~~a~~v~g~~~~~ 298 (437) T cd01597 219 WHTARDRIAELASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALL 298 (437) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 54353899999999999988899999999999874330421543589988788899879788999999999998779999 Q ss_pred HHHHHCCCCHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCC Q ss_conf 767404840000100---1005579889999998656765230586665210121123--78443999999999853999 Q gi|254780370|r 316 LTIMKGLPLAYSKDM---QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLP 390 (473) Q Consensus 316 ~~~~~~~p~~~~rDl---q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~Gip 390 (473) T Consensus 299 ~~---~~~~~~Erd~~~~~~~~~~l~~~~~l~~~~l~~~~~~l~~l~vn~erm~~nl~~~~~~i~ae~~~~~L~~--~ig 373 (437) T cd01597 299 LD---AMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAP--KLG 373 (437) T ss_pred HH---HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHCCCHHHHHHHHHHHHH--CCC T ss_conf 98---7675421054625778988999999999999999987511535599999999856268989999999863--389 Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHH Q ss_conf 79999999999999998298968989999994001132689996599999962148999998999999999 Q gi|254780370|r 391 FREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTY 461 (473) Q Consensus 391 FReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~ 461 (473) T Consensus 374 ~~~Ahe~v~~~a~~A~~~g~~l~e~~~~d~~~~~~l~~~el~~lldP~~~i-------G~a~~~v~~~~~r 437 (437) T cd01597 374 RQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYL-------GSAPALVDRVLAR 437 (437) T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHC-------CCHHHHHHHHHCC T ss_conf 899999999999999997988999986485643799999999872998773-------9689999999729

HHsearch alignment for GI: 254780370 and conserved domain: cd01597