RPSBLAST alignment of GI: 254780370 and protein with PDBid: 1yis

>1yis_A Adenylosuccinate lyase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478

 Score =  146 bits (370), Expect = 8e-36
 Identities = 58/431 (13%), Positives = 130/431 (30%), Gaps = 31/431 (7%)

Query: 54  LAKQGI--ISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIH--MNIEARLTSLIGSIA 109
             + G+  ++ +   ++     V     +      S + +  H  M        L  + A
Sbjct: 45  EKELGLKQVTQDAIDEMKSNRDVFDWPFIR-----SEERKLKHDVMAHNHAFGKLCPTAA 99

Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169
           G +H   +          +  ++    I      ++  L   + ++   +  G TH QTA
Sbjct: 100 GIIHLGATSCFVQDNADLIAYRDSIDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTA 159

Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIER----LDECPLGAAALAGTSFPIDRHFTAKEL 225
             VT G   + + +          +  ++      +   G      T F  D        
Sbjct: 160 SLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFRGIKGATGTQDSFLTLFAGDESKVEALD 219

Query: 226 GF------REPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279
                                R    + +   ++      ++  +I +            
Sbjct: 220 ELVTKKANFSNRFLITGQTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQAFGELLEPFE 279

Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF- 338
                GSS MP K+NP  +E   A + ++  A    LTI+    L  + D    +  +  
Sbjct: 280 K-DQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIP 338

Query: 339 DALETLQIIILAISAMIEDLTVNKDRLQE--AATKSHSTATDLADWLVSHAGLPFREAHY 396
           D L T + ++  +  + E L+V  D +++      +          L    G+  ++AH 
Sbjct: 339 DVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEE-GVDRQQAHA 397

Query: 397 ITG-CTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEV 455
           +     +   +    +   +   M       +   V  ++       +  +F G C ++ 
Sbjct: 398 VIRKTALEAKQLQATQKVDIRQTMADPFFDSVRDRVVGLVN------NPINFTGRCVSQT 451

Query: 456 LKQVTYWRNRI 466
              +       
Sbjct: 452 ESFIAKELKPT 462