RPSBLAST alignment of GI: 254780370 and protein with PDBid: 3c8t
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451
Score = 168 bits (426), Expect = 2e-42
Identities = 96/438 (21%), Positives = 167/438 (38%), Gaps = 20/438 (4%)
Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70
+ ++G F+ M ++ + F + E ++ ++ A+ GII + A I
Sbjct: 5 SPLYGRSFADDK---MRELFSAQSFISRCVETEVALAR----AQARLGIIPEDAAAGITA 57
Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130
+ E+ I +E L++ G +H + D + L I
Sbjct: 58 AARTFAPEMERLRDDTEIVGYPILPLVEQ-LSAHAGEAGKYLHWGATTQDIMDTATVLQI 116
Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190
++ I+ ++ + L A H +T M G THLQ A PVTFG+ ++ F R +
Sbjct: 117 RDGLALISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGYKAAVWLSAFDRHAA 176
Query: 191 RFFDSIERLDECP----LGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246
R + R+ G A GT + A+EL P+ I S RD + E
Sbjct: 177 RLEEISPRVLVVEFSGASGTLASLGTRGLDVQRELARELNLGVPS---ITWHSARDAVAE 233
Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRL-SDAFSTGSSIMPQKRNPDGAELVRAKT 305
+ A+ + + +LA +I + T + V SS MPQK+NP EL+ A
Sbjct: 234 TVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGA 293
Query: 306 GRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRL 365
+ S+L M + + V + I+ M+ L V DR+
Sbjct: 294 RIVRNHATSMLDAMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRM 353
Query: 366 QEAATKSHS--TATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQI 423
+E S A + L H +EAH I A +++ L ++ M +
Sbjct: 354 RENLDHSRGLIVAEAVMMALAPH--TGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEVA 411
Query: 424 SPVITSAVYDILKVESSI 441
P+ A+ D+ + +
Sbjct: 412 KPLGEEALRDLTDPRNYL 429