RPSBLAST alignment of GI: 254780370 and protein with PDBid: 3e04
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, acetylation, alternative initiation, anti-oncogene, cell cycle, cytoplasm; 1.95A {Homo sapiens} Length = 490
Score = 189 bits (482), Expect = 9e-49
Identities = 57/355 (16%), Positives = 118/355 (33%), Gaps = 34/355 (9%)
Query: 60 ISSEEAQKIIEGLKVIRAEIVDGSFVF----SRDLEDIHMNIEARLTSLIGSIAGK---- 111
+ + A I++ + ++ F + +MN+ +++ + G
Sbjct: 92 LDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGS 151
Query: 112 -------MHTARSRNDQVALDLRLWI------KEKTLEITNDLKKLLTILLDKAEEHHNT 158
H +S++ + I E L L L K++E
Sbjct: 152 KIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHD---ALDAKSKEFAQI 208
Query: 159 IMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDR 218
I G TH Q A P+T G YV+ ++R ++ R+ E G A+
Sbjct: 209 IKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIG 268
Query: 219 HF------TAKELGF-REPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTP 271
A G N ++++ D ++E A + ++A +I +
Sbjct: 269 FAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSG 328
Query: 272 QFNFVR--LSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKD 329
+ + + GSSIMP K NP E + ++ G +++ +
Sbjct: 329 PRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVF 388
Query: 330 MQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDLADWL 383
+ V + L ++ + + + N +R+ + +S T L +
Sbjct: 389 KPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHI 443