HHsearch alignment for GI: 254780371 and conserved domain: COG1166

>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism].
Probab=100.00  E-value=6.4e-42  Score=304.97  Aligned_cols=422  Identities=24%  Similarity=0.305  Sum_probs=321.1

Q ss_pred             CCCEEEC-CEEEE-------CCCCHHHHHHH-----CCCCEEEEEHHHHHHHHHHHHHHCCC--------CCCEEEEEEE
Q ss_conf             8716668-85898-------78429999997-----49978997799999999999986144--------7978999641
Q gi|254780371|r    2 SAFKYFE-GSLHA-------ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYALK   60 (431)
Q Consensus         2 ~~~~~~~-~~l~i-------~~~~l~~La~~-----~gTP~yV~d~~~i~~n~~~l~~a~~~--------~~~~i~yAvK   60 (431)
T Consensus        42 ~yF~In~~G~v~V~P~~~~~~~~dL~elV~~l~~~g~~LPlL~rFp~IL~~Rl~~ln~aF~~Ai~ey~Y~g~Y~~VyPIK  121 (652)
T COG1166          42 GYFDINDAGHVTVCPDPDPGARVDLAELVKALRDRGLRLPLLLRFPQILQHRLRSLNAAFARAIEEYGYPGGYFAVYPIK  121 (652)
T ss_pred             CCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             60224478627980699976522099999999965789856985269999999999999999999808898605898766


Q ss_pred             CCCCHHHHHHHHHCC----CCEEEECHHHHHHHHHCC-CCCCCEEECCCCCCCHHHHHHH---HCCCC-CCCCCCCHHHH
Q ss_conf             079999999999739----928986899986522125-7843124447754201244442---06872-33332202467
Q gi|254780371|r   61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAP-VPAERIVFSGVGKTIDEIDLAL---QSGIY-CFNVESESELK  131 (431)
Q Consensus        61 aN~~~~il~~l~~~G----~g~dv~S~~El~~al~~G-~~~~~Ii~~g~~k~~~~l~~ai---~~gv~-~i~vDs~~el~  131 (431)
T Consensus       122 vNQ~r~vVe~Lv~~g~~~~~GLEAGSK~ELm~vLA~~~~~~~~IvCNG-yKDrEyI~lAlig~kLGh~v~ivIEklsEl~  200 (652)
T COG1166         122 VNQHRRVVESLVASGKGYPLGLEAGSKAELMAVLAHAGNPGSLIVCNG-YKDREYIRLALIGEKLGHKVYIVIEKLSELD  200 (652)
T ss_pred             ECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECC-CCCHHHHHHHHHHHHHCCCEEEEEECHHHHH
T ss_conf             554188999998636898776667887999999983389997178457-4609999999999982795499992267999


Q ss_pred             HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC-HHHHHHHHHHCCCCCHHH
Q ss_conf             6877411334421589987237786744333223344456887111134577764156322-002335564156442048
Q gi|254780371|r  132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESF  210 (431)
Q Consensus       132 ~l~~~a~~~~~~~~I~lRinp~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~~~~~~l~-l~GlH~H~GS~~~~~~~~  210 (431)
T Consensus       201 ~Vl~eA~~lgvkP~lGvR~RL~s-qGsGkW~~SgG~ksKFGLsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~i  279 (652)
T COG1166         201 LVLEEAKQLGVKPRLGVRARLAS-QGSGKWQSSGGEKSKFGLSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDI  279 (652)
T ss_pred             HHHHHHHHCCCCCCCEEEEEEEC-CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             99999997399976336888623-55675000468310148888999999999876265776678764100013456999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC------CCCHHHHHHHHH-------HHHCCCCCEEEEEECC
Q ss_conf             999999998876531026665268806873000266545------531145655565-------4210245303441011
Q gi|254780371|r  211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR------PPSSSDYASLIH-------QYFGNLQCKIILEPGR  277 (431)
Q Consensus       211 ~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~y~~~~~------~~~~~~~~~~i~-------~~~~~~~~~l~~EPGR  277 (431)
T Consensus       280 k~~~rEA~r~YvEL~klGa~i~~~dVGGGLgVDYdGt~t~~~~S~NY~l~eYA~dVV~~l~d~C~~~~~p~P~IisESGR  359 (652)
T COG1166         280 KTGVREAARFYVELRKLGANIKYFDVGGGLGVDYDGTRTQSDCSKNYGLNEYANDVVWALKDACEEKGLPHPTIISESGR  359 (652)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCH
T ss_conf             99999999999999982788607851684433216764466323367889999899999999998459999807810442


Q ss_pred             EECCCCCEEEEEEEEECCCCCC-CCEEECC------------------------------------------CCCCC---
Q ss_conf             1203663258887640346897-4220055------------------------------------------30001---
Q gi|254780371|r  278 FLVADVGILVTKVISIKKSADK-TFVILDV------------------------------------------AMNDF---  311 (431)
Q Consensus       278 ~lva~ag~ll~~V~~vK~~~~~-~~~~vD~------------------------------------------g~~~~---  311 (431)
T Consensus       360 aitAHhaVLI~~Vi~v~~~~~~~~p~~~~~~~~~~l~~~~~e~~~~i~~r~~~E~~hds~~~~~~~~~~f~~G~l~L~~R  439 (652)
T COG1166         360 AITAHHAVLIANVIGVERHEYNDAPLPDAPRNLPPLWRTLQELYESITARNLREWYHDSQDDLEDAHSLFNLGYLSLQER  439 (652)
T ss_pred             HHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf             32204228986300024578777888888432458999999986345778899999876767999998750353228888


Q ss_pred             ------------------------CCC--------------------------HHHCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             ------------------------100--------------------------111024653222234677761589998
Q gi|254780371|r  312 ------------------------MRP--------------------------TLYDAYHEINYIVNPAGDRLHIHADIV  341 (431)
Q Consensus       312 ------------------------~~p--------------------------~~~~~~~~i~~~~~~~~~~~~~~~~i~  341 (431)
T Consensus       440 a~aEqL~~aic~ki~~~~~~~~~~~r~~ldeLqe~ladky~vNfSlFQSlPD~W~IdQlFPI~Pl~r-LdE~PtRravL~  518 (652)
T COG1166         440 AWAEQLYLAICHKVQQLLRQKNRSHRPILDELQERLADKYYVNFSLFQSLPDAWGIDQLFPILPLHR-LDEEPTRRAVLL  518 (652)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEHHHHCCCCHHHHCCCCCCCCCCC-CCCCCCCEEEEE
T ss_conf             8799999999999999854530687678999999976674772057505841210023566230223-588755113788


Q ss_pred             EEECCCCCEEE---EE------EECCCCCCCC--EEEEECCCCHHHHHHCCCCCCCCCEE--EEEE-CC--EEEEEEECC
Q ss_conf             10005666656---21------0056688888--99996797023334027788986659--9998-89--689998248
Q gi|254780371|r  342 GPICETGDFIA---LN------RKIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVN-GS--QFHIIRPRM  405 (431)
Q Consensus       342 G~~C~~~D~l~---~~------~~lp~l~~GD--~l~i~~~GAY~~s~~s~fn~~p~p~~--v~v~-~g--~~~~ir~re  405 (431)
T Consensus       519 DiTCDSDG~Id~yid~~~i~s~Lplh~~~~~epy~lGfFLVGAYQEILG~~HNLFGdt~~v~V~v~~~G~y~ie~~~egd  598 (652)
T COG1166         519 DITCDSDGKIDHYIDGDGIKSTLPLHEYDPGEPYLLGFFLVGAYQEILGNMHNLFGDTTAVHVVVDPKGSYEIEDIVEGD  598 (652)
T ss_pred             EEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCC
T ss_conf             65307988600231376654544478889998756652127579999766665058984589998799867998652356


Q ss_pred             CHHHHHH-CCCCCHHHHHCCCC
Q ss_conf             9889973-08885688623432
Q gi|254780371|r  406 TFQELIE-LDSIPAWLQKTPKQ  426 (431)
Q Consensus       406 t~ed~~~-~~~~p~~~~~~~~~  426 (431)
T Consensus       599 Ti~dmL~yv~yd~~~l~~~~r~  620 (652)
T COG1166         599 TVADMLEYVQYDPKELLTLYRQ  620 (652)
T ss_pred             CHHHHHHHHCCCHHHHHHHHHH
T ss_conf             0999998735699999999999