HHsearch alignment for GI: 254780371 and conserved domain: COG3616
>COG3616 Predicted amino acid aldolase or racemase [Amino acid transport and metabolism].
Probab=99.68 E-value=4.5e-14 Score=115.71 Aligned_cols=323 Identities=17% Similarity=0.179 Sum_probs=200.3
Q ss_pred HHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCC
Q ss_conf 9999974997899779999999999998614479789996410799999999997399-289868999865221257843
Q gi|254780371|r 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAE 97 (431)
Q Consensus 19 ~~La~~~gTP~yV~d~~~i~~n~~~l~~a~~~~~~~i~yAvKaN~~~~il~~l~~~G~-g~dv~S~~El~~al~~G~~~~ 97 (431)
T Consensus 10 ~~~~~~l~tP~~liD~dr~~~Ni~r~qa~~~~~g~~lrph~KT~k~~~la~~ql~aGa~git~~tl~eae~~a~aGi~-- 87 (368)
T COG3616 10 ELAAADLDTPAALIDLDRLDGNIDRMQARADDHGVRLRPHVKTHKCPELARIQLDAGAWGITCATLGEAEVFADAGID-- 87 (368)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCC--
T ss_conf 133147799643112887763699999860544836501234335879999998537731576106788998715865--
Q ss_pred CEEECCCCCCCHHHHHHHH--CCC--CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1244477542012444420--687--233332202467687741133442158998723778674433322334445688
Q gi|254780371|r 98 RIVFSGVGKTIDEIDLALQ--SGI--YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 (431)
Q Consensus 98 ~Ii~~g~~k~~~~l~~ai~--~gv--~~i~vDs~~el~~l~~~a~~~~~~~~I~lRinp~~~~~~~~~~~tg~~~sKFGi 173 (431)
T Consensus 88 dIl~a~p~~~~~~~~~L~~l~~~~~~~~~~iDs~~~~~~l~~~~~~~~~pl~v~iE~D----~G~----------~R~Gv 153 (368)
T COG3616 88 DILLAYPLPGRAALAALAELLADPPRISVLIDSVEQLDALAALARDAGKPLRVLIEID----SGL----------HRSGV 153 (368)
T ss_pred CEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEC----CCC----------CCCCC
T ss_conf 2587158871668999998518998429995788999999999875499746999957----888----------86675
Q ss_pred CCCCC-HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 71111-34577764156322002335564156442048999999998876531026665268806873000266545531
Q gi|254780371|r 174 PIHQI-HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 (431)
Q Consensus 174 ~~~~~-~~~~~~~~~~~~l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~y~~~~~~~~ 252 (431)
T Consensus 154 ~t~~~~~~La~~~~~~~~l~~~Gv~~y~gh~~~~~~~~~~~~~--~~a~~~~~~~g~~~~~vt~gg-tp~~~-------- 222 (368)
T COG3616 154 RTPEVAEALAAEIAAAPGLRLAGVMTYPGHSYGPGSEVAAAER--VHAAALLGAVGRAAPVLTSGG-TPTAE-------- 222 (368)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHH--HHHHHHHCCCCCCCCEEECCC-CCCHH--------
T ss_conf 7868999999765204660785553036634677653333335--568997405687663453278-87322--------
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCEECCC--------------CCEEEEEEEEECCCCCCCCEEECCCCCCCCCCH--H
Q ss_conf 145655565421024530344101112036--------------632588876403468974220055300011001--1
Q gi|254780371|r 253 SSDYASLIHQYFGNLQCKIILEPGRFLVAD--------------VGILVTKVISIKKSADKTFVILDVAMNDFMRPT--L 316 (431)
Q Consensus 253 ~~~~~~~i~~~~~~~~~~l~~EPGR~lva~--------------ag~ll~~V~~vK~~~~~~~~~vD~g~~~~~~p~--~ 316 (431)
T Consensus 223 --~~--------~~~~~~~e~r~G~Y~~~D~~~~~~g~~s~~d~Al~v~atvis~p---~~~~aivdaG~k~ls~D~~~~ 289 (368)
T COG3616 223 --LV--------AGLSSTTELRAGNYVFNDLVQVAFGIPSLSDGALTVAATVISHP---TPGRAIVDAGSKALSRDRPAA 289 (368)
T ss_pred --HH--------CCCCCCEEECCCCEEEHHHHHHHHCCCCCCCCEEEEEEEEEECC---CCCEEECCCCCCCCCCCCCCC
T ss_conf --21--------35775136516733421366666267751013047767999648---886564057861000567767
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEEEEE----ECCCCCEEEEEE-ECCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 102465322223467776158999810----005666656210-056688888999967970233340277889866599
Q gi|254780371|r 317 YDAYHEINYIVNPAGDRLHIHADIVGP----ICETGDFIALNR-KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 (431)
Q Consensus 317 ~~~~~~i~~~~~~~~~~~~~~~~i~G~----~C~~~D~l~~~~-~lp~l~~GD~l~i~~~GAY~~s~~s~fn~~p~p~~v 391 (431)
T Consensus 290 ~~~~~~---~~---g~~~---~~~~~~e~~~ln~ehg~~~~~~~~~~~l~vGd~v~i~PnH~-c~----t~~~f~--~~~ 353 (368)
T COG3616 290 RTGFGL---GG---GYEA---ARVAAPEVMRLNEEHGTLSVQDPPADLLKVGDRVRLRPNHS-CA----TFNLFD--DLH 353 (368)
T ss_pred CCCEEE---CC---CCHH---HCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCH-HH----HHHHCC--EEE
T ss_conf 664244---06---8543---20463223561301269953677666688877699607962-46----666347--389
Q ss_pred EEECCE
Q ss_conf 998896
Q gi|254780371|r 392 MVNGSQ 397 (431)
Q Consensus 392 ~v~~g~ 397 (431)
T Consensus 354 v~~g~~ 359 (368)
T COG3616 354 VVRGGG 359 (368)
T ss_pred EEECCC
T ss_conf 985791