HHsearch alignment for GI: 254780371 and conserved domain: pfam01168
>pfam01168 Ala_racemase_N Alanine racemase, N-terminal domain.
Probab=99.53 E-value=8.9e-13 Score=106.92 Aligned_cols=183 Identities=21% Similarity=0.364 Sum_probs=137.6
Q ss_pred EEHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CCHH---HHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCCEEECCCCC
Q ss_conf 7799999999999986144797899964107-9999---9999997399-289868999865221257843124447754
Q gi|254780371|r 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQA---VIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGK 106 (431)
Q Consensus 32 ~d~~~i~~n~~~l~~a~~~~~~~i~yAvKaN-~~~~---il~~l~~~G~-g~dv~S~~El~~al~~G~~~~~Ii~~g~~k 106 (431)
T Consensus 1 Idl~~l~~Ni~~i~~~~~~-~~~l~aVvK~nayG~g~~~i~~~~-~~g~~~f~v~~~~Ea~~lr~~~~~~-~Il~l~~~- 76 (216)
T pfam01168 1 IDLDALRHNIRALRERAGR-PVKLMAVVKANAYGHGAVRVARAL-AAGADGFGVATLQEALELREAGITA-PILVLGFF- 76 (216)
T ss_pred CCHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCHHHHHHHH-HHCCCCEEEEEHHHHHHHHHHCCCC-CEEEECCC-
T ss_conf 9779999999999985699-998999977777786699999999-8089855980099999999818987-07773689-
Q ss_pred CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 20124444206872333322024676877411334421589987237786744333223344456887111134577764
Q gi|254780371|r 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 (431)
Q Consensus 107 ~~~~l~~ai~~gv~~i~vDs~~el~~l~~~a~~~~~~~~I~lRinp~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~~ 186 (431)
T Consensus 77 ~~~~~~~~~~~~~-~~~v~s~~~l~~l~~~~~~~~~~~~v~l~vd------------tGm--~R~G~~~~~~~~~~~~i~ 141 (216)
T pfam01168 77 PPEELALAAEYDL-IPTVDSLEQAEALSAAAAKLGRPLRVHLKVD------------TGM--GRLGFTPEELPALAEALA 141 (216)
T ss_pred CHHHHHHHHHCCC-EEEECCHHHHHHHHHHHHHCCCCEEEEEEEE------------ECC--CCCCCCHHHHHHHHHHHH
T ss_conf 9699999998597-8997889999999999998599808999997------------478--768879999999999985
Q ss_pred HCCCCCHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 15632200233556415644204899-99999988765310266652688068
Q gi|254780371|r 187 TLPGVKISGVDMHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGG 238 (431)
Q Consensus 187 ~~~~l~l~GlH~H~GS~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~ldiGG 238 (431)
T Consensus 142 -~~~l~~~Gi~tH~~~~-d~~~~~~~~q~~~f~~~~~~l~~~~---~~~s~~n 189 (216)
T pfam01168 142 -LPGLRLEGLMTHFACA-DEPDATNRAQLARFRELADALEAAG---PVLSLGN 189 (216)
T ss_pred -CCCCCEEEEEEECCCC-CCCCHHHHHHHHHHHHHHHHHHCCC---CEEEHHC
T ss_conf -5999678999505887-8975899999999999999865689---9985116