HHsearch alignment for GI: 254780371 and conserved domain: pfam01261
>pfam01261 AP_endonuc_2 Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.
Probab=90.46 E-value=0.57 Score=26.69 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 11345777641563220023355641564420489999999988765310266652688068730002665455311456
Q gi|254780371|r 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 (431)
Q Consensus 177 ~~~~~~~~~~~~~~l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~y~~~~~~~~~~~~ 256 (431)
T Consensus 27 ~~~~l~~~~~~~-gl~i~~~~~~~~~~~~~~~~r~~~~~~~~~~l~~a~~lG--~~~i~~~~g~~~~~~~--~~~~~~~~ 101 (201)
T pfam01261 27 EIEELKALLKEY-GLEITSLNPSLGLLEPDEREREAALEALKRAIELAAALG--AKVVVVHPGGALPGED--REEALDRL 101 (201)
T ss_pred HHHHHHHHHHHC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCC--HHHHHHHH
T ss_conf 899999999970-997999977865458898999999999999999999739--9589982688788999--99999999
Q ss_pred HHH---HHHHHCCCCCEEEEEEC
Q ss_conf 555---65421024530344101
Q gi|254780371|r 257 ASL---IHQYFGNLQCKIILEPG 276 (431)
Q Consensus 257 ~~~---i~~~~~~~~~~l~~EPG 276 (431)
T Consensus 102 ~~~l~~~~~~a~~~gi~i~iE~~ 124 (201)
T pfam01261 102 AESLNELAELAEEYGVKLALENH 124 (201)
T ss_pred HHHHHHHHHHHHHCCEEEEEEEC
T ss_conf 99999999988755738999987