PSIBLAST alignment of GI: 254780371 and protein with PDB id: 2qgh

>gi|189095960|pdb|2QGH|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From Helicobacter Pylori Complexed With L-Lysine Length = 396
 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 158/396 (39%), Positives = 231/396 (58%), Gaps = 8/396 (2%)

Query: 19  EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78
           E+L    +TPFY Y    I++ +L +  AF G  +++CYALKANSN +++  LAHL SG 
Sbjct: 3   EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 62

Query: 79  DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138
           D VS GE++RAL A +   RIVFSGVGK+  EI+ AL+  I   NVES  ELKT+   A 
Sbjct: 63  DCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 122

Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198
           SLG KA I+ R+NP+I+A TH  ISTG KE+KFG+   +   ++ +A     ++   V  
Sbjct: 123 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 182

Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258
           HIGSQ+  +E   +A + +  + + L + G +++  DVGGG+G++Y  +       DYA 
Sbjct: 183 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 241

Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318
            I      L   II EPGR +VA+ G L+T+V+  KK  +K FVI+D  MNDF+RP+LY 
Sbjct: 242 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKK--NKRFVIVDAGMNDFLRPSLY- 298

Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378
                 + +           D+VGP+CE+ D    +  +    PGD + IEK GAYG+  
Sbjct: 299 ---HAKHAIRVITPSEISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 355

Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414
           +  YNSR  + E+ +   +  +IR R   ++L  L+
Sbjct: 356 ASQYNSRPKLLELALED-KIRVIRKREALEDLWRLE 390