RPSBLAST alignment of GI: 254780371 and protein with PDBid: 2oo0
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens} Length = 471
Score = 270 bits (690), Expect = 5e-73
Identities = 91/433 (21%), Positives = 166/433 (38%), Gaps = 35/433 (8%)
Query: 4 FKYFEGSLHAENVSLEKLAHVV----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59
+ + A+++ +K+ V + FY I K +L + A + YA+
Sbjct: 21 CHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVT--PFYAV 78
Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119
K N ++A++KTLA G+G D S+ E++ + VP ERI+++ K + +I A +G+
Sbjct: 79 KCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGV 138
Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179
+SE EL + + + + T + + KFG +
Sbjct: 139 QMMTFDSEVELMKVAR----------AHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSR 188
Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239
L + + + GV H+GS E+F +A R + G ++ +D+GGG
Sbjct: 189 -LLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGG 247
Query: 240 LGIAYHSDHRPP--SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK--- 294
+ + + +L + + +II EPGR+ VA L +I+ K
Sbjct: 248 FPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVL 307
Query: 295 -----------KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN-PAGDRLHIHADIVG 342
S ++ + LYD H + P D + + I G
Sbjct: 308 KEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWG 367
Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHII 401
P C+ D I + GD + E GAY + T+N V +G + ++
Sbjct: 368 PTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLM 427
Query: 402 RPRMTFQELIELD 414
+ E++
Sbjct: 428 QQFQNPDFPPEVE 440