HHsearch alignment for GI: 254780372 and conserved domain: pfam01311
>pfam01311 Bac_export_1 Bacterial export proteins, family 1. This family includes the following members; FliR, MopE, SsaT, YopT, Hrp, HrcT and SpaR All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.
Probab=92.93 E-value=0.67 Score=24.68 Aligned_cols=112 Identities=15% Similarity=0.217 Sum_probs=61.3
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 50843348879999999998899999996299899999998506567765446734586689989998999999999999
Q gi|254780372|r 110 GIQPLMNNQITETTAIQRVAEPFWVFMRNNTREKDLSLFMDMAHSSHRNTDITKNDHIEYRILIPSFMISELRRSFEIGF 189 (246)
Q Consensus 110 a~~P~~~~~i~~~~a~~~~~~Plr~FM~~~t~~~dl~~f~~~a~~~~~~~~~~~~~~~~~~vLiPAF~iSEL~~aF~iGf 189 (246)
T Consensus 108 ~~DP~~~~~~~~~~~l~~~~-~~~lFl~~~gh~~~i~~l~~Sf~~iP~g~-~~~----~~~~~~~~~~~~~~~~~F~~al 181 (249)
T pfam01311 108 SFDPASGSQSSPVGQFLNQL-AILLFLASGGHLLLLSALYDSYQIWPVGQ-FLP----NMNAQAAKFLLKALSQLFSIAL 181 (249)
T ss_pred CCCCCCCCCCCHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CCC----CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 55987787541899999999-99999994819999999999986558876-667----6548999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999999--997555427348999999999
Q gi|254780372|r 190 LIILPFLIIDMIVATIV--MAMGMMMLPPTSISLPFKVIF 227 (246)
Q Consensus 190 liylPFlvIDlvVa~iL--mamGMmMl~P~~iSlPfKlll 227 (246)
T Consensus 182 ~lAaPii~~~ll~~l~lGll~R~~PQlnvf~lg~pvki~~ 221 (249)
T pfam01311 182 LLAAPVIILLLLIDLALGLLSRFAPQLNVFVLSFPIKSAV 221 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 9999999999999999999997173100699896699999