RPSBLAST alignment for GI: 254780372 and conserved domain: COG1338

>gnl|CDD|31529 COG1338, FliP, Flagellar biosynthesis pathway, component FliP [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 248
 Score =  231 bits (591), Expect = 1e-61
 Identities = 114/245 (46%), Positives = 163/245 (66%), Gaps = 5/245 (2%)

Query: 2   IRYCFFALFLVTPELVFAKSSLHDVMNI-PADLSISTWIVRTFGIFTILSIAPILLIMVT 60
                  L         A+ S++  +N  P D       V+   + T+LS+AP +L+M+T
Sbjct: 7   FLILICPLICPLMSADAAQPSVNLSLNTAPNDPKQLVTTVQLLALLTVLSLAPSILLMMT 66

Query: 61  CFPRFIIVFSILRTGMGMGSVPPNLVIISLALFMTFYVMSPTLDRSIEMGIQPLMNNQIT 120
            F R IIVFS LRT +G    PPN V+I LALF+TF++M+PT D+  +  I+PL++ +I+
Sbjct: 67  SFTRIIIVFSFLRTALGTQQTPPNQVLIGLALFLTFFIMAPTFDKIYDDAIKPLLDEEIS 126

Query: 121 ETTAIQRVAEPFWVFMRNNTREKDLSLFMDMAHSSHRNTDITKNDHIEYRILIPSFMISE 180
           +  A ++ AEP   FM   TREKDL+LFM +A+           + +  R+LIP+FMISE
Sbjct: 127 QQEAFEKAAEPLREFMLKQTREKDLALFMRIANLP----PPKTPEDVPLRVLIPAFMISE 182

Query: 181 LRRSFEIGFLIILPFLIIDMIVATIVMAMGMMMLPPTSISLPFKVIFFVLIDGWSLLVEN 240
           L+ +F+IGFLI LPFL+ID++VA+++MAMGMMMLPP  ISLPFK++ FVL+DGW+LLV +
Sbjct: 183 LKTAFQIGFLIYLPFLVIDLVVASVLMAMGMMMLPPVMISLPFKLLLFVLVDGWNLLVGS 242

Query: 241 LVKSF 245
           LV+SF
Sbjct: 243 LVQSF 247