RPSBLAST alignment for GI: 254780372 and conserved domain: COG1338
>gnl|CDD|31529 COG1338, FliP, Flagellar biosynthesis pathway, component FliP [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 248
Score = 231 bits (591), Expect = 1e-61
Identities = 114/245 (46%), Positives = 163/245 (66%), Gaps = 5/245 (2%)
Query: 2 IRYCFFALFLVTPELVFAKSSLHDVMNI-PADLSISTWIVRTFGIFTILSIAPILLIMVT 60
L A+ S++ +N P D V+ + T+LS+AP +L+M+T
Sbjct: 7 FLILICPLICPLMSADAAQPSVNLSLNTAPNDPKQLVTTVQLLALLTVLSLAPSILLMMT 66
Query: 61 CFPRFIIVFSILRTGMGMGSVPPNLVIISLALFMTFYVMSPTLDRSIEMGIQPLMNNQIT 120
F R IIVFS LRT +G PPN V+I LALF+TF++M+PT D+ + I+PL++ +I+
Sbjct: 67 SFTRIIIVFSFLRTALGTQQTPPNQVLIGLALFLTFFIMAPTFDKIYDDAIKPLLDEEIS 126
Query: 121 ETTAIQRVAEPFWVFMRNNTREKDLSLFMDMAHSSHRNTDITKNDHIEYRILIPSFMISE 180
+ A ++ AEP FM TREKDL+LFM +A+ + + R+LIP+FMISE
Sbjct: 127 QQEAFEKAAEPLREFMLKQTREKDLALFMRIANLP----PPKTPEDVPLRVLIPAFMISE 182
Query: 181 LRRSFEIGFLIILPFLIIDMIVATIVMAMGMMMLPPTSISLPFKVIFFVLIDGWSLLVEN 240
L+ +F+IGFLI LPFL+ID++VA+++MAMGMMMLPP ISLPFK++ FVL+DGW+LLV +
Sbjct: 183 LKTAFQIGFLIYLPFLVIDLVVASVLMAMGMMMLPPVMISLPFKLLLFVLVDGWNLLVGS 242
Query: 241 LVKSF 245
LV+SF
Sbjct: 243 LVQSF 247