HHsearch alignment for GI: 254780373 and conserved domain: PRK05696
>PRK05696 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=90.72 E-value=0.21 Score=27.10 Aligned_cols=42 Identities=7% Similarity=-0.139 Sum_probs=35.1
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 543553234676320599999999999999999999997067
Q gi|254780373|r 3 YDDTTSQYIRGNQHKLFVTWFVVYTFIGIFCGWLGGIVMLFL 44 (172)
Q Consensus 3 ~~~~~~~~~kG~~~kl~Iii~~vv~ll~~g~g~~~~~~~~~~ 44 (172)
T Consensus 6 ~e~e~~~k~KkKLiiii~~~vlll~ggggg~~~~lg~~~~~~ 47 (168)
T PRK05696 6 LEKDEAPKSKKKLIIIIVVGVLLALGGGGAAWFFMGSSDPAE 47 (168)
T ss_pred HHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 113467888633204799999999999999999955887544