HHsearch alignment for GI: 254780373 and conserved domain: PRK05697
>PRK05697 flagellar basal body-associated protein FliL-like protein; Validated.
Probab=99.92 E-value=6.5e-24 Score=149.68 Aligned_cols=92 Identities=16% Similarity=0.353 Sum_probs=80.4
Q ss_pred CEEECC-CCEEEEECCCC-C-EEEEEEEEEEECCCH----HHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
Q ss_conf 302103-32024205898-3-389999998504402----4542189999999998418988950889999999999999
Q gi|254780373|r 80 LQIFSL-QPIITNFDSSP-K-DWLRLDIALICKDIP----DKVFLETLHQDIMAYIRTVSIKQITGAQGFRYFKEDIEER 152 (172)
Q Consensus 80 ~~~~~l-~~fvvNL~~~~-~-r~lk~~i~l~~~~~~----~e~~~p~Ird~il~~L~~~~~~dl~~~~Gk~~Lk~el~~~ 152 (172)
T Consensus 31 ~~Y~~l~P~fV~N~~~~g~rlrylqv~v~Lmv~d~~~~~~le~H~PlIR~~li~lls~qt~~~l~t~eGre~Lr~e~l~~ 110 (135)
T PRK05697 31 YAYYGLEPDIVTNYISDGKKLGYVKIDVELMVKDPDDLAAVEHHDPLIRNALVELLGQQTEDKVKSLTGREEIRQECLKQ 110 (135)
T ss_pred EEEEECCCCEEEECCCCCCCEEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
T ss_conf 58996589979965789860469999999998787568999970768999999998549987965987899999999999
Q ss_pred HH-HH----CCCCEEEEEEEEEEC
Q ss_conf 85-42----356312576432201
Q gi|254780373|r 153 VK-LR----SQGFVSSVIFRTFII 171 (172)
Q Consensus 153 in-~~----~~g~V~~V~Ft~fVv 171 (172)
T Consensus 111 vn~~l~~etG~~~Ve~VlFT~fV~ 134 (135)
T PRK05697 111 VNELLEQETGKPLVVDLLFTKYLY 134 (135)
T ss_pred HHHHHHHHHCCCCEEEEEEECCEE
T ss_conf 999998631866434675000344