BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780374|ref|YP_003064787.1| flagellar basal body L-ring
protein [Candidatus Liberibacter asiaticus str. psy62]
(238 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|299131787|ref|ZP_07024982.1| flagellar L-ring protein [Afipia sp. 1NLS2]
gi|298591924|gb|EFI52124.1| flagellar L-ring protein [Afipia sp. 1NLS2]
Length = 249
Score = 245 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 3/234 (1%)
Query: 7 IVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ L GC S ++ + P++S + + + P ++ SLW
Sbjct: 15 ALAMIGCLAGGCSSLERLANVGEQPKLSSIDNPTTKAGYKPVSMPMPTPQPASYNPNSLW 74
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
R+ A FKD RA VGDILT+ + I D+A N+T RSR+ + ++ F +
Sbjct: 75 RNGSRAFFKDQRAHQVGDILTITVNITDKANIANETQRSRSGTEDSNITSFFGVKKVPGT 134
Query: 125 QMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+GN L D ++ GKGSI+R E L +AA+VT +L NGNL++ G QE+RVN EIR
Sbjct: 135 NTSGNMLTTDSTSSTDGKGSITRQEALQTNVAAVVTQLLPNGNLVVEGKQEIRVNYEIRE 194
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ + G Q+++ L P
Sbjct: 195 LVVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQARYGQQVMDILLP 248
>gi|220924576|ref|YP_002499878.1| flagellar basal body L-ring protein [Methylobacterium nodulans ORS
2060]
gi|219949183|gb|ACL59575.1| flagellar L-ring protein [Methylobacterium nodulans ORS 2060]
Length = 246
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 1 MYRYSFIVL--CYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M R + L + L C++ ++ I P +S + + P +
Sbjct: 1 MSRPVRLALPTLLALGLSACNTVDRLANIGAQPALSAIEDPTAQAGYKPVRLPMPEVQPV 60
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLWR A FKD RA VGD++TV + + D+A +N+T RSR+NS + F
Sbjct: 61 SYAPNSLWRTGSRAFFKDQRAAKVGDLVTVKVNVTDKANLNNETKRSRSNSESFGIPNAF 120
Query: 117 SLFGQ----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
L + + L D ++ G GSI RAE + +AAIVT +L NGNL++ G
Sbjct: 121 GLETKTKLLGGADPDKLLTADSTTSNDGAGSIQRAETVTTNVAAIVTQVLPNGNLVVEGK 180
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QE+R+N E+R L V G++RP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G Q +
Sbjct: 181 QEIRINFEVRELIVAGVIRPEDIESDNTIDSAKIAQARIAYGGRGQITDVQQPRYGQQFL 240
Query: 233 ENLSP 237
+ + P
Sbjct: 241 DIMLP 245
>gi|146341906|ref|YP_001206954.1| flagellar basal body L-ring protein [Bradyrhizobium sp. ORS278]
gi|146194712|emb|CAL78737.1| Flagellar L-ring protein (Basal body L-ring protein)
[Bradyrhizobium sp. ORS278]
Length = 259
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 94/245 (38%), Positives = 140/245 (57%), Gaps = 8/245 (3%)
Query: 1 MYRYSFIVLCYSSL--LFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
+ R + I + ++ L GC S +S+I P+++ + + + P K
Sbjct: 14 LRRVALISVSFAVLSVAGGCSSIDRLSQIGERPKLTEIDNPTTQPGYKPVQMPMPKPETV 73
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLWR+ A FKD RA +GD+LTV + I D+A F N+T RSR N ++
Sbjct: 74 SYAPNSLWRNGSRAFFKDQRAHQIGDLLTVTVSISDKANFANETQRSRTNKEDSGITDFI 133
Query: 117 S---LFGQQTPQMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
L Q + G L DG +S GKG+I R+E L +AA+VT +L NGNL++ G
Sbjct: 134 GSKTLGAQAQKVLPGRILTADGTSSSDGKGTIQRSESLTTSVAAVVTQVLPNGNLVVEGK 193
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QE+RVN EIR L V GIVRP+D+ + N++ KIA+ARISYGG+G+ T++ +P G Q++
Sbjct: 194 QEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQITDVQQPRYGQQVM 253
Query: 233 ENLSP 237
+ L P
Sbjct: 254 DILLP 258
>gi|209884524|ref|YP_002288381.1| flagellar L-ring protein FlgH [Oligotropha carboxidovorans OM5]
gi|226701926|sp|B6JBH5|FLGH_OLICO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|209872720|gb|ACI92516.1| flagellar L-ring protein FlgH [Oligotropha carboxidovorans OM5]
Length = 249
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 3/238 (1%)
Query: 3 RYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + ++ L GC S +S+I P+++ + + + P ++
Sbjct: 11 RTAAALVAVGCLASGCSSIERLSQIGEQPKLTAIDNPTTKAGYKPVSMPMPTPQPASYNP 70
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLWR+ A FKD RA VGDILTV + I D+A N+T RSR N+ ++ F +
Sbjct: 71 NSLWRNGSRAFFKDQRAHQVGDILTVIVNITDKANIANETQRSRANTEDSSITNFFGIKK 130
Query: 121 -QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
T L +S GKGS+ R E L +AA+VT +L NGNL++ G QE+RVN
Sbjct: 131 VPGTNGAGNMLTTGSVASSDGKGSVVRQEALQTNVAAVVTQLLPNGNLVVEGKQEIRVNF 190
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q+++ L P
Sbjct: 191 EMRELVVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQVMDILLP 248
>gi|148256794|ref|YP_001241379.1| flagellar basal body L-ring protein [Bradyrhizobium sp. BTAi1]
gi|146408967|gb|ABQ37473.1| Flagellar L-ring protein (Basal body L-ring protein)
[Bradyrhizobium sp. BTAi1]
Length = 259
Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 93/245 (37%), Positives = 138/245 (56%), Gaps = 8/245 (3%)
Query: 1 MYRYSFIVLCYSSL--LFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
+ R + + + ++ L GC S IS+I P+++ + + + P K
Sbjct: 14 LRRVALVSVSFAVLSFAGGCSSIDRISQIGERPKLTEIDNPTTQPGYKPVQMPMPKPEVV 73
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLWR+ A FKD RA VGD+LTV + I D+A N+T RSR N ++
Sbjct: 74 SYAPNSLWRNGSRAFFKDQRARQVGDLLTVTVSISDKANIANETQRSRTNKEDSGITDFV 133
Query: 117 S---LFGQQTPQMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
L + G L DG +S GKG+I R+E L +AA+VT +L NGNL++ G
Sbjct: 134 GSKTLGATGKNILPGRILTADGTSSSDGKGTIQRSESLTTSVAAVVTQVLPNGNLVVEGK 193
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QE+RVN EIR L V GIVRP+D+ + N++ KIA+ARISYGG+G+ T++ +P G Q++
Sbjct: 194 QEIRVNYEIRELIVAGIVRPEDIQSDNTIDSTKIAQARISYGGRGQITDVQQPRYGQQVM 253
Query: 233 ENLSP 237
+ L P
Sbjct: 254 DILLP 258
>gi|90423015|ref|YP_531385.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
BisB18]
gi|90105029|gb|ABD87066.1| flagellar L-ring protein [Rhodopseudomonas palustris BisB18]
Length = 252
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 132/244 (54%), Gaps = 8/244 (3%)
Query: 2 YRYSF--IVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R ++L + L GC S +S+I P+++ + + + P K ++
Sbjct: 8 NRIVLAGLLLAFGGLAGGCSSIDRLSQIGEKPKLAAIENPTAQPGYKPVQMPMPKPEAAS 67
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ SLWR+ A F+D RA VGDILTV + D+A N+T RSR N ++
Sbjct: 68 YNANSLWRNGSRAFFRDQRAHQVGDILTVTVNFTDKANIANETQRSRTNKEDSGITDFAG 127
Query: 118 LFGQQTPQMNGN----LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
L D +S GKGS+ R E L +AA+VT +L NGNL++ G Q
Sbjct: 128 SKLIGGAASQVMPGRILTADATSSSDGKGSVQRQEALQTSVAAVVTQLLPNGNLVVEGKQ 187
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+RVN EIR L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ +++ +P G Q+++
Sbjct: 188 EIRVNFEIRELIVAGIVRPEDIQSDNTIDSAKIAQARIAYGGRGQISDVQQPRYGQQVMD 247
Query: 234 NLSP 237
L P
Sbjct: 248 VLLP 251
>gi|254780374|ref|YP_003064787.1| flagellar basal body L-ring protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040051|gb|ACT56847.1| flagellar basal body L-ring protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 238
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS
Sbjct: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG
Sbjct: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE
Sbjct: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL
Sbjct: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
>gi|39936963|ref|NP_949239.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
CGA009]
gi|192292791|ref|YP_001993396.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
TIE-1]
gi|81619648|sp|Q6N2Z5|FLGH_RHOPA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701929|sp|B3QIW5|FLGH_RHOPT RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|39650820|emb|CAE29343.1| putative flagellar L-ring protein FlgH [Rhodopseudomonas palustris
CGA009]
gi|192286540|gb|ACF02921.1| flagellar L-ring protein [Rhodopseudomonas palustris TIE-1]
Length = 252
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 130/237 (54%), Gaps = 6/237 (2%)
Query: 7 IVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
++ L GC S ++ I P ++P+ + + P K ++ + SLW
Sbjct: 15 ALMATGGLAGGCSSIDRLAAIGERPALTPIENPTTQPGYKPVQMPMPKPEVASYNANSLW 74
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
R+ A FKD RA VGDILTV + D+A N+T RSR + ++ TP
Sbjct: 75 RNGSRAFFKDQRAAKVGDILTVTVNFTDKANIANETQRSRTSKEDSGITDFIGSKTITTP 134
Query: 125 Q----MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
L D +S GKGS+ R E L +AA+VT +L NGNL++ G QE+RVN E
Sbjct: 135 ATAVLPGRILTTDSTSSSDGKGSVQRQEALQTNVAAVVTQVLPNGNLVVEGKQEIRVNFE 194
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
IR L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q+++ L P
Sbjct: 195 IRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQVMDVLLP 251
>gi|91976159|ref|YP_568818.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
BisB5]
gi|91682615|gb|ABE38917.1| flagellar L-ring protein [Rhodopseudomonas palustris BisB5]
Length = 252
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 131/244 (53%), Gaps = 8/244 (3%)
Query: 2 YRYSFI--VLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R I +L L GC S ++ I P +S + + + P K ++
Sbjct: 8 NRIVLITALLATGGLAGGCSSIDRLASIGERPALSAIENPTTQPGYKPVQMPMPKPEVAS 67
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ SLWR+ A F+D RA VGDI+TV + D+A NQT RSR++S ++
Sbjct: 68 YNANSLWRNGSRAFFRDQRAAKVGDIMTVTVNFTDKANIANQTQRSRSSSEDSGITDFAG 127
Query: 118 LFGQQTPQM----NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
L+ D + GKGS+ R E L +AA+VT +L NGNL++ G Q
Sbjct: 128 SKLLTGNAAQVLPGRLLSTDSTSTADGKGSVQRQEALQTSVAAVVTQVLPNGNLVVEGKQ 187
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+RVN E+R L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q+++
Sbjct: 188 EIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQVMD 247
Query: 234 NLSP 237
L P
Sbjct: 248 VLLP 251
>gi|170742323|ref|YP_001770978.1| flagellar basal body L-ring protein [Methylobacterium sp. 4-46]
gi|168196597|gb|ACA18544.1| flagellar L-ring protein [Methylobacterium sp. 4-46]
Length = 246
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 7/241 (2%)
Query: 3 RYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + L + L C++ +S+I P +S + + P + +
Sbjct: 6 RLALACL-LGAGLSACNTVDRLSQIGARPPLSAIEDPTAQAGYKPVRLPMPEVQPVSYAP 64
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLWR A FKD RA VGD++TV + + D+A +N+T RSR N+ + F L
Sbjct: 65 NSLWRTGSRAFFKDQRAAKVGDLVTVKVNVTDKANLNNETKRSRANTEAFGVPNAFGLEK 124
Query: 121 Q----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
L+ ++ G GSI RAE + +AAIVT +L NGNL++ G QE+R
Sbjct: 125 SAKLIGAADPKNLLDTASTMSNDGAGSIQRAETVTTNVAAIVTQVLPNGNLVVEGKQEIR 184
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN E+R L V G++RP+D+++ N++ KIAEARI+YGG+G+ T++ +P G Q ++ +
Sbjct: 185 VNFEVRELVVAGVIRPEDIESDNTIDSAKIAEARIAYGGRGQITDVQQPRYGQQFLDVML 244
Query: 237 P 237
P
Sbjct: 245 P 245
>gi|209964692|ref|YP_002297607.1| flagellar L-ring protein FlgH [Rhodospirillum centenum SW]
gi|209958158|gb|ACI98794.1| flagellar L-ring protein FlgH [Rhodospirillum centenum SW]
Length = 259
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 10/244 (4%)
Query: 4 YSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ SLL C S ++ + P ++P+ + P + +++
Sbjct: 15 KVLVLAAAVSLLSACSSMDRLASVGQTPPLTPIQNPATAPGYQPVSLPMPAPAQGEREAN 74
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLWR A F+D RA VGDILT+ I+I+D+A NQ+ R+RN + + G F L
Sbjct: 75 SLWRAGARAFFRDQRANRVGDILTITIQINDKAQIQNQSQRTRNGKENMGIPGLFGLQRN 134
Query: 122 QTPQMNGNLN--------YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ N +S G GSI R+E++N+ +AA++T +L NGNL++ G Q
Sbjct: 135 IARVLPTPDNDTLESLVKTTADSSSVGTGSIGRSEQINMQVAALITQVLPNGNLVVQGKQ 194
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
EVRVN E+R L + GI+RP+D+ + N++SY+KIAEARISYGG+G +++ +P G Q+ +
Sbjct: 195 EVRVNYEVRELTINGIIRPEDITSQNTISYEKIAEARISYGGRGHISDVQQPRWGQQVFD 254
Query: 234 NLSP 237
++P
Sbjct: 255 IVAP 258
>gi|150395489|ref|YP_001325956.1| flagellar basal body L-ring protein [Sinorhizobium medicae WSM419]
gi|166214829|sp|A6U641|FLGH_SINMW RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|150027004|gb|ABR59121.1| flagellar L-ring protein [Sinorhizobium medicae WSM419]
Length = 236
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 125/238 (52%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + LL GC + +EI P MSP+GS L + + P L + K
Sbjct: 1 MRMRITAILAAGLLAGCQNQAFNEIGRAPAMSPIGSGL-QYTQTPQLAMYPKQPRHVTNG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW D AALFKD+RA+N+GDILTVDIRIDD+A F+N+T RSR NS L G
Sbjct: 60 YSLWNDQQAALFKDARAINIGDILTVDIRIDDKASFENETDRSRKNSSGFNL-GASGESQ 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+G+L Y + G G R+EKL LL+AA+VT +LENGNL+ISGSQEVRVN E
Sbjct: 119 TSDFAWSGDLEYGSNTKTEGDGKTERSEKLRLLVAAVVTGVLENGNLLISGSQEVRVNHE 178
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+DVDA N +SYD+IAEARISYGG+GR TE+ +PP G QL++ +SPL
Sbjct: 179 LRILNVAGIVRPRDVDADNVISYDRIAEARISYGGRGRLTEVQQPPWGQQLVDLVSPL 236
>gi|12057225|gb|AAB81417.2| FlgH [Sinorhizobium meliloti]
Length = 236
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 125/238 (52%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + LL GC + +EI P MSP+GS L + + P L + K
Sbjct: 1 MRTRITAVLAAGLLAGCQNQAFNEIGRAPAMSPIGSGL-QYTQTPQLAMYPKQPRHVTNG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW D AALFKD+RA+N+GDILTVDIRIDD+A F+N+T RSR NS L G
Sbjct: 60 YSLWNDQQAALFKDARAINIGDILTVDIRIDDKASFENETDRSRTNSSGFNL-GASGQSQ 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+G+L Y + G G R+EKL LL+AA+VT +LENGNL+ISGSQEVRVN E
Sbjct: 119 TSDFAWSGDLEYGSNTKTEGDGKTERSEKLRLLVAAVVTGVLENGNLLISGSQEVRVNHE 178
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+DVDA N +SYD+IAEARISYGG+GR TE+ +PP G QL++ +SPL
Sbjct: 179 LRILNVAGIVRPRDVDADNVISYDRIAEARISYGGRGRLTEVQQPPWGQQLVDLVSPL 236
>gi|86750898|ref|YP_487394.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
HaA2]
gi|86573926|gb|ABD08483.1| Flagellar L-ring protein [Rhodopseudomonas palustris HaA2]
Length = 252
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 8/244 (3%)
Query: 2 YRYSFI--VLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R I +L L GC S ++ I P +S + + + P K ++
Sbjct: 8 NRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPMPKPEVAS 67
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ SLWR+ A F+D RA VGDI+TV + D+A N+T RSR+ S ++
Sbjct: 68 YNANSLWRNGSRAFFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDSGITDFAG 127
Query: 118 ---LFGQQTPQMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
L G + G L D +S GKG++ R EKL +AA+VT +L NGNL++ G Q
Sbjct: 128 SKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDRQEKLQTSVAAVVTQVLPNGNLVVEGKQ 187
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+RVN E+R L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q+++
Sbjct: 188 EIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQVMD 247
Query: 234 NLSP 237
L P
Sbjct: 248 VLLP 251
>gi|15964419|ref|NP_384772.1| flagellar basal body L-ring protein [Sinorhizobium meliloti 1021]
gi|307311561|ref|ZP_07591202.1| flagellar L-ring protein [Sinorhizobium meliloti BL225C]
gi|17380483|sp|Q52950|FLGH_RHIME RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|15073596|emb|CAC45238.1| Flagellar L-ring protein precursor (basal body L-ring protein)
[Sinorhizobium meliloti 1021]
gi|306899578|gb|EFN30207.1| flagellar L-ring protein [Sinorhizobium meliloti BL225C]
Length = 236
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 125/238 (52%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + LL GC + +EI P MSP+GS L + + P L + K
Sbjct: 1 MRTRITAVLAAGLLAGCQNQAFNEIGRAPAMSPIGSGL-QYTQTPQLAMYPKQPRHVTNG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW D AALFKD+RA+N+GDILTVDIRIDD+A F+N+T RSR NS L G
Sbjct: 60 YSLWNDQQAALFKDARAINIGDILTVDIRIDDKASFENETDRSRKNSSGFNL-GASGQSQ 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+G+L Y + G G R+EKL LL+AA+VT +LENGNL+ISGSQEVRVN E
Sbjct: 119 TSDFAWSGDLEYGSNTKTEGDGKTERSEKLRLLVAAVVTGVLENGNLLISGSQEVRVNHE 178
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+DVDA N +SYD+IAEARISYGG+GR TE+ +PP G QL++ +SPL
Sbjct: 179 LRILNVAGIVRPRDVDADNVISYDRIAEARISYGGRGRLTEVQQPPWGQQLVDLVSPL 236
>gi|316932821|ref|YP_004107803.1| flagellar L-ring protein [Rhodopseudomonas palustris DX-1]
gi|315600535|gb|ADU43070.1| flagellar L-ring protein [Rhodopseudomonas palustris DX-1]
Length = 252
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 90/243 (37%), Positives = 134/243 (55%), Gaps = 8/243 (3%)
Query: 3 RYSFIVLCYSS--LLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
R I ++ L GC S ++ I P ++P+ + + P K ++
Sbjct: 9 RIVLIAALMATGGLAGGCSSIDRLAAIGERPALTPIENPTTQPGYKPVQMPMPKPEVASY 68
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS- 117
+ SLWR+ A FKD RA VGDILTV + D+A NQT RSR++ ++
Sbjct: 69 NANSLWRNGSRAFFKDQRAAKVGDILTVTVNFTDKANIANQTQRSRSSKEDSGVTDFIGS 128
Query: 118 --LFGQQTPQMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ T + G L D ++ GKGS+ R E L +AA+VT +L NGNL++ G QE
Sbjct: 129 KTITNTATAVLPGRILTTDSTSSTDGKGSVQRQEALQTTVAAVVTQVLPNGNLVVEGKQE 188
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN EIR L V GIVRP+D+ + N + KIA+ARI+YGG+G+ T++ +P G Q+++
Sbjct: 189 IRVNFEIRELIVAGIVRPEDIQSDNIIDSSKIAQARIAYGGRGQITDVQQPRYGQQVMDV 248
Query: 235 LSP 237
L P
Sbjct: 249 LLP 251
>gi|307318916|ref|ZP_07598347.1| flagellar L-ring protein [Sinorhizobium meliloti AK83]
gi|306895330|gb|EFN26085.1| flagellar L-ring protein [Sinorhizobium meliloti AK83]
Length = 236
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 124/238 (52%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + LL GC + +EI P MSP+GS L + + P L + K
Sbjct: 1 MRTRITAVLAAGLLAGCQNQAFNEIGRAPAMSPIGSGL-QYTQTPQLAMYPKQPRHVTNG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW D AALFKD+RA+N+GDILTVDIRIDD+A F+N+T RSR NS L G
Sbjct: 60 YSLWNDQQAALFKDARAINIGDILTVDIRIDDKASFENETDRSRKNSSGFNL-GASGQSQ 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+G+L Y + G G R+EKL LL+AA+VT +LENGNL+ISGSQEVRVN E
Sbjct: 119 TSDFAWSGDLEYGSNTKTEGDGKTERSEKLRLLVAAVVTGVLENGNLLISGSQEVRVNHE 178
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+DVDA N +SYD+IAEARISYGG+GR TE+ +PP G Q+++ +SPL
Sbjct: 179 LRILNVAGIVRPRDVDADNVISYDRIAEARISYGGRGRLTEVQQPPWGQQIVDLVSPL 236
>gi|46203669|ref|ZP_00209069.1| COG2063: Flagellar basal body L-ring protein [Magnetospirillum
magnetotacticum MS-1]
Length = 247
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 5 SFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
V+ + L C++ +S++ P +S + + P + S
Sbjct: 7 RLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDIQPVSYAPNS 66
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF--- 119
LWR A FKD RA +GD+LTV + + D+A +N+T RSR N+ L F L
Sbjct: 67 LWRTGSRAFFKDQRAARIGDLLTVKVNVTDKANLNNETKRSRTNAEGFGLPNAFGLEKNA 126
Query: 120 --GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ LN +S G GS+ RAE + +AA+VT +L NGNL++ G QE+R+
Sbjct: 127 GVAAAGISADKLLNGTSTSSSDGAGSVQRAETVTTNVAAVVTQVLPNGNLVVEGKQEIRI 186
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R L V G+VRP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G QL++ L P
Sbjct: 187 NFEVRELIVAGVVRPEDIESDNTIDSTKIAQARIAYGGRGQITDVQQPRYGQQLVDILLP 246
>gi|307945668|ref|ZP_07661004.1| flagellar L-ring protein FlgH [Roseibium sp. TrichSKD4]
gi|307771541|gb|EFO30766.1| flagellar L-ring protein FlgH [Roseibium sp. TrichSKD4]
Length = 250
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
+ R S VL + +L C + +S++ P ++ + P + +
Sbjct: 7 LTRLSLCVLTAT-MLTACGTADKLSQVGKAPALNAIQDPTTTPGYRPVQMPMPEPQQAHY 65
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS- 117
SLWR + A F+D RA VGDILTV + I D+A DN+T R R ++ + G
Sbjct: 66 SPNSLWRSGNRAFFEDQRANQVGDILTVLVTIADKAEIDNKTERKREDTSNTGAGGVLGS 125
Query: 118 ----LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + + SG+GS+ R EKL +AA+VT +L NGN++I G Q
Sbjct: 126 QIEQWVLPDAASASALASINSSTDFSGEGSVDREEKLQTTVAAVVTQVLPNGNMVIEGRQ 185
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
EVRVN E+R L V GIVRP+D+ ++N+++ +KIAEARI YGG+G+ T++ +P G Q+++
Sbjct: 186 EVRVNFEVRELIVAGIVRPEDIASNNTIASEKIAEARIGYGGRGQITDVQQPRYGSQVMD 245
Query: 234 NLSP 237
L P
Sbjct: 246 ILLP 249
>gi|92116934|ref|YP_576663.1| flagellar basal body L-ring protein [Nitrobacter hamburgensis X14]
gi|91799828|gb|ABE62203.1| flagellar L-ring protein [Nitrobacter hamburgensis X14]
Length = 252
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 8/244 (3%)
Query: 2 YRYSFI--VLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R +L + L GC S +S+I P+++ + + + P K ++
Sbjct: 8 NRIVLTGTLLAAAGLASGCSSIDRLSQIGERPKLTAIDNPTTQPGYKPVQMPMPKPELAS 67
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ SLWR+ A FKD RA VGD+LTV + D+A N+T RSR N ++
Sbjct: 68 YNANSLWRNGSRAFFKDQRAARVGDLLTVTVNFTDKANIANETQRSRTNKEDSGITDFIG 127
Query: 118 ---LFGQQTPQMNGN-LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ T + G L D +S GKGS+ R E L +AA+VT +L NGNL++ G Q
Sbjct: 128 SKVIKNPATAVLPGRILTADSTASSDGKGSVQRQENLQTSVAAVVTQVLPNGNLVVEGKQ 187
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+RVN EIR L V GIVRP+D+ + N++ KIA+ARISYGG+G+ +++ +P G Q+++
Sbjct: 188 EIRVNLEIRELIVAGIVRPEDIQSDNTIDSSKIAQARISYGGRGQISDVQQPRYGQQVMD 247
Query: 234 NLSP 237
L P
Sbjct: 248 VLLP 251
>gi|75675312|ref|YP_317733.1| flagellar basal body L-ring protein [Nitrobacter winogradskyi
Nb-255]
gi|110816533|sp|Q3STL0|FLGH_NITWN RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|74420182|gb|ABA04381.1| flagellar L-ring protein [Nitrobacter winogradskyi Nb-255]
Length = 252
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 8/245 (3%)
Query: 1 MYRYSFI--VLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
+ R +L + L GC S +S+I P+++ + + + P K
Sbjct: 7 LNRIVLTGTLLAAAGLASGCSSIDRLSQIGESPKLTAIDNPTTQPGYKPVQMPMPKPETV 66
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ + SLWR+ A F+D RA VGD+LTV + D+A NQT RSR + ++
Sbjct: 67 SYNANSLWRNGSRAFFRDQRAARVGDLLTVTVNFTDRANIANQTQRSRVSKDDSGIADFA 126
Query: 117 S---LFGQQTPQMNGNL-NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
L G + G L D S GKG + R E L +A +VT +L NGNL++ G
Sbjct: 127 GSKLLGGTAQKVLPGRLLTTDSESLSDGKGLVQRQENLQTSVATVVTQVLPNGNLVVEGK 186
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QE+RVN EIR L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q++
Sbjct: 187 QEIRVNFEIRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQVM 246
Query: 233 ENLSP 237
+ L P
Sbjct: 247 DVLLP 251
>gi|188582484|ref|YP_001925929.1| flagellar basal body L-ring protein [Methylobacterium populi BJ001]
gi|179345982|gb|ACB81394.1| flagellar L-ring protein [Methylobacterium populi BJ001]
Length = 250
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 5 SFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
V+ + L C++ +S++ P +S + + P + + S
Sbjct: 10 RLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDVAPVSYAPNS 69
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
LWR A FKD RA +GD+LTV + + D+A +N+T RSR N+ L F L
Sbjct: 70 LWRTGSRAFFKDQRAARIGDLLTVKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSA 129
Query: 123 TPQMNG-----NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G +N +S G GS+ RAE + +AA+VT +L NGNL++ G QE+R+
Sbjct: 130 GVAAAGISPDKLINGTSTSSSDGAGSVQRAETVTTSVAAVVTQVLPNGNLVVEGKQEIRI 189
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R L V G+VRP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G QL++ L P
Sbjct: 190 NFEVRELIVAGVVRPEDIESDNTIDSTKIAQARIAYGGRGQITDVQQPRYGQQLVDILLP 249
>gi|227820862|ref|YP_002824832.1| flagellar basal body L-ring protein [Sinorhizobium fredii NGR234]
gi|254789283|sp|C3MG28|FLGH_RHISN RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|227339861|gb|ACP24079.1| flagellar L-ring protein precursor (basal body L-ring protein) FlgH
[Sinorhizobium fredii NGR234]
Length = 236
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 124/238 (52%), Positives = 156/238 (65%), Gaps = 3/238 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + +SLL GC + EI P MSP+GS L + + P L K
Sbjct: 1 MRMQLTAVLAASLLAGCQNQAFREIGQAPSMSPIGSGL-QYTQAPQLAAYPKQPHQMTAG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW D AALFKD+RA+NVGDILTVDI+IDD+A F+N+T RSR NS L G
Sbjct: 60 YSLWNDQQAALFKDARAINVGDILTVDIQIDDKASFNNETDRSRTNSSGFNL-GASGESQ 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ +GNL Y + G G R+EKL LL+AA+VT +LENGNL+ISGSQEVRVN E
Sbjct: 119 TSDFEWSGNLKYGSNIKTEGDGKTERSEKLRLLVAAVVTGVLENGNLLISGSQEVRVNHE 178
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+DVDA N +SYD+IAEARISYGG+GR E+ +PP G Q+++ +SP+
Sbjct: 179 LRILNVAGIVRPRDVDADNIISYDRIAEARISYGGRGRLMEVQQPPWGQQVVDLVSPI 236
>gi|328543154|ref|YP_004303263.1| flagellar L-ring protein FlgH [polymorphum gilvum SL003B-26A1]
gi|326412900|gb|ADZ69963.1| Flagellar L-ring protein FlgH [Polymorphum gilvum SL003B-26A1]
Length = 248
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 85/247 (34%), Positives = 129/247 (52%), Gaps = 10/247 (4%)
Query: 1 MYRYS---FIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R + + L+ C + +S++ P ++ + P
Sbjct: 1 MTRPLATPLMATAIAFLVGACGAPDRLSQVGRTPPLNAIQDPTTTPGYRPVQMPMPAPQP 60
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ SLW+ + A F+D RA +GDILTV + I D+A FDNQT R+R+ S G
Sbjct: 61 AHYNPNSLWKSGNRAFFEDQRAKQIGDILTVMVTISDKAQFDNQTKRARSGSDSTGAGGA 120
Query: 116 FS-----LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+F + + G GS+ R EKL +AA+VT +L NGNL+I
Sbjct: 121 LGAAIDKIFLPAGMDASSLATLNSSSNYQGSGSVDREEKLQTTVAAVVTQVLPNGNLVIE 180
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G QE+RVN E+R L V GIVRP+D+ + N+++ +KIAEARI YGG+G+ T++ +P G Q
Sbjct: 181 GRQEIRVNFEVRELVVAGIVRPEDIASDNTIASEKIAEARIGYGGRGQITDVQQPRYGTQ 240
Query: 231 LIENLSP 237
+++ L P
Sbjct: 241 VLDILLP 247
>gi|218531218|ref|YP_002422034.1| flagellar basal body L-ring protein [Methylobacterium
chloromethanicum CM4]
gi|218523521|gb|ACK84106.1| flagellar L-ring protein [Methylobacterium chloromethanicum CM4]
Length = 250
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 5 SFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
V+ + L C++ +S++ P +S + + P S + S
Sbjct: 10 RLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDTSPVSYAPNS 69
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
LWR A FKD RA +GD+LT+ + + D+A +N+T RSR N+ L F L
Sbjct: 70 LWRTGSRAFFKDQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSA 129
Query: 123 TPQMNG-----NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G +N +S G GS+ RAE + +AA+VT +L NGNL++ G QE+R+
Sbjct: 130 GVAAAGIAPDKLINGTSTSSSDGAGSVQRAETVTTNVAAVVTQVLPNGNLVVEGKQEIRI 189
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R L V G+VRP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G QL++ L P
Sbjct: 190 NFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQLVDILLP 249
>gi|163852462|ref|YP_001640505.1| flagellar basal body L-ring protein [Methylobacterium extorquens
PA1]
gi|240139799|ref|YP_002964276.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Methylobacterium extorquens AM1]
gi|254562214|ref|YP_003069309.1| flagellar L-ring protein [Methylobacterium extorquens DM4]
gi|163664067|gb|ABY31434.1| flagellar L-ring protein [Methylobacterium extorquens PA1]
gi|240009773|gb|ACS40999.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Methylobacterium extorquens AM1]
gi|254269492|emb|CAX25458.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Methylobacterium extorquens DM4]
Length = 250
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 5 SFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
V+ + L C++ +S++ P +S + + P S + S
Sbjct: 10 RLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDTSPVSYAPNS 69
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
LWR A FKD RA +GD+LT+ + + D+A +N+T RSR N+ L F L
Sbjct: 70 LWRTGSRAFFKDQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSA 129
Query: 123 TPQMNG-----NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G +N +S G GS+ RAE + +AA+VT +L NGNL++ G QE+R+
Sbjct: 130 GVAAAGIAPDKLINGTSTSSSDGAGSVQRAETVTTNVAAVVTQVLPNGNLVVEGKQEIRI 189
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R L V G+VRP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G QL++ L P
Sbjct: 190 NFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYGQQLVDILLP 249
>gi|288958677|ref|YP_003449018.1| flagellar L-ring protein precursor [Azospirillum sp. B510]
gi|288910985|dbj|BAI72474.1| flagellar L-ring protein precursor [Azospirillum sp. B510]
Length = 255
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 94/245 (38%), Positives = 137/245 (55%), Gaps = 8/245 (3%)
Query: 1 MYRYSFIVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ R++ I +SL G S I++I P+MS + + P + +
Sbjct: 10 LIRFAMIATAATSLTACGAASRIADIGKAPEMSNIQDPQAKPGYQPVSLPMPTPLPTERN 69
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SLWR A FKD RA VGDILT++I I DQA N++ R+R N+ + F +
Sbjct: 70 PNSLWRTGAKAFFKDQRAGKVGDILTINISIADQAKLSNESKRARANTEKAGIPNLFGME 129
Query: 120 GQQTP-------QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
G +N + + GKGS+ R EK+ L +AA+VT L NGNL+I G
Sbjct: 130 GDTLNRILPTGASATNLVNMNSNTNNDGKGSVDRNEKIELKVAALVTQTLPNGNLVIQGR 189
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QEVRVN E+R L + G++RP+D+ A N++SY+KIAEARISYGG+G+ T++ +P G QL
Sbjct: 190 QEVRVNYELRDLQIHGVIRPEDITAQNTISYEKIAEARISYGGRGQITDVQQPRYGQQLY 249
Query: 233 ENLSP 237
+ + P
Sbjct: 250 DIIMP 254
>gi|118588713|ref|ZP_01546121.1| flagellar L-ring protein precursor H [Stappia aggregata IAM 12614]
gi|118438699|gb|EAV45332.1| flagellar L-ring protein precursor H [Stappia aggregata IAM 12614]
Length = 249
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 7/242 (2%)
Query: 3 RYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R+ + S+L GC + ++ + P ++ + P + +
Sbjct: 7 RHLLASIALSTLAAGCGTADKLANVGQQPALNAIQDPTTTPGYRPVQMPMPEPQQAHYNP 66
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS--- 117
SLW+ A FKD RA VGDILTV + IDDQA +N+T R R+ S + G
Sbjct: 67 NSLWQSGSRAFFKDQRASQVGDILTVVVTIDDQAEIENKTERKRSESSGAGVGGALGTAI 126
Query: 118 --LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+F + + N + + SG GS+ R E L +AA+VT +L NGN++I G QEV
Sbjct: 127 DTIFLPASSAASDLANVNSDSSFSGDGSVDRNETLQTTVAAVVTQVLPNGNMVIEGRQEV 186
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
RVN E+R L V GIVRP+D+ + N ++ ++IAEARI YGG+G+ T++ +P +G+Q+++ L
Sbjct: 187 RVNFEVRELIVAGIVRPEDITSDNRIASEQIAEARIGYGGRGQITDVQQPRVGNQVLDIL 246
Query: 236 SP 237
P
Sbjct: 247 LP 248
>gi|27380941|ref|NP_772470.1| flagellar basal body L-ring protein [Bradyrhizobium japonicum USDA
110]
gi|81736030|sp|Q89I09|FLGH1_BRAJA RecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body
L-ring protein 1; Flags: Precursor
gi|27354107|dbj|BAC51095.1| flagellar L-ring protein precursor [Bradyrhizobium japonicum USDA
110]
Length = 254
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 16 FGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFK 73
GC S +S+I P++S + + + P K ++ SLWR A FK
Sbjct: 27 SGCSSIDRLSQIGEQPKLSAIDNPTAQPGYKPVQMPMPKPEVASYNPNSLWRSGSRAFFK 86
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ---MNGNL 130
D RA +GD+LTV + I D+A N+T RSR ++ P L
Sbjct: 87 DQRAHQIGDLLTVTVNITDKANIANETQRSRTAKEDSGITDFIGSQTVTQPLKVLPGRLL 146
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
D ++ GKGS++R E L +AA+VT +L NGNL++ G QE+RVN EIR L V GIV
Sbjct: 147 TTDSTSSADGKGSVNRQEALQTNVAAVVTQVLPNGNLVVEGKQEIRVNYEIRELVVAGIV 206
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
RP+D+ + N++ KIA+ARI+YGG+G+ ++ +P G Q+++ L P
Sbjct: 207 RPEDIQSDNTIDSSKIAQARIAYGGRGQIMDVQQPRYGQQVMDVLLP 253
>gi|115523554|ref|YP_780465.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
BisA53]
gi|115517501|gb|ABJ05485.1| flagellar L-ring protein [Rhodopseudomonas palustris BisA53]
Length = 252
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 2 YRYSFIVLCYSSLLFG--CHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R + + G C S +S+I P ++ + + + P K ++
Sbjct: 8 NRIVLAGVLAVTGGLGGGCSSLDRLSQIGEKPALAAIENPTAQPGYKPVSMPMPKPEPAS 67
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ SLWR+ A FKD RA VGDILTV + D+A NQT RSR N ++
Sbjct: 68 YNANSLWRNGSRAFFKDQRAHQVGDILTVTVNFTDKANIANQTQRSRTNKEDSGVTDFIG 127
Query: 118 LFGQQTPQ----MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
TP L D +S GKGS+ R E L +AA+VT +L NGNL++ G Q
Sbjct: 128 SKTIGTPATAILPGRILTTDSTASSDGKGSVQRQEALQTSVAAVVTQLLPNGNLVVEGKQ 187
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+RVN EIR L V GIVRP+D+ + N++ KIA+ARI+YGG+G+ T++ +P G Q+++
Sbjct: 188 EIRVNFEIRELIVAGIVRPEDIQSDNTIDSAKIAQARIAYGGRGQITDVQQPRYGQQVMD 247
Query: 234 NLSP 237
L P
Sbjct: 248 VLLP 251
>gi|315121843|ref|YP_004062332.1| flagellar basal body L-ring protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495245|gb|ADR51844.1| flagellar basal body L-ring protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 239
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 181/239 (75%), Positives = 206/239 (86%), Gaps = 1/239 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
MYRYS I+LC LL GCH SEITG PQMSP+GSSL+++ R+ GIDFKN +TKK
Sbjct: 1 MYRYSVIILCNILLLAGCHLGRFSEITGSPQMSPIGSSLNQHRRILLSGIDFKNPRATKK 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SYSLWRDS++ LFKDSRALNVGDILTVDI+IDDQAVFDN+TGRSR+NSLH+KLSGGFS+F
Sbjct: 61 SYSLWRDSNSTLFKDSRALNVGDILTVDIKIDDQAVFDNKTGRSRDNSLHKKLSGGFSIF 120
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G+ +P M+ + NYDG S GKGSISRAEKLN+LIAAIVT ILENGNLIISGSQEV VND
Sbjct: 121 GKNSPGMSADANYDGKSTSVGKGSISRAEKLNILIAAIVTEILENGNLIISGSQEVCVND 180
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
E+RSLNV GIVRPQDVDA+N VSYDKIAEARISYGGKG TTELL+ PIG +LI++ SPL
Sbjct: 181 EMRSLNVAGIVRPQDVDANNIVSYDKIAEARISYGGKGTTTELLKTPIGQRLIDSFSPL 239
>gi|110677665|ref|YP_680672.1| flagellar basal body L-ring protein [Roseobacter denitrificans OCh
114]
gi|109453781|gb|ABG29986.1| flagellar L-ring protein FlgH, putative [Roseobacter denitrificans
OCh 114]
Length = 243
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 7/243 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M V+ + ++ GC + + P SP ++ + + ++ +
Sbjct: 1 MKNVFLCVMTAALVMSGCA-RLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDD 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW + +LF D RA+ GDILTV I ID++A N T RSR+ S + F L
Sbjct: 60 ASLWSGARQSLFGDRRAVQQGDILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQ 119
Query: 121 QQTPQMNGNLNYDGG------GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ ++ SSG GS+ R EKL L +AA + +L NG L I+GSQE
Sbjct: 120 RIDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVAATIVDVLPNGVLSIAGSQE 179
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN E+R L V+G VRP+D+ N ++YDKIA AR+SYGG+G+ T++ +P G Q ++
Sbjct: 180 LRVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDI 239
Query: 235 LSP 237
+ P
Sbjct: 240 VLP 242
>gi|260431746|ref|ZP_05785717.1| flagellar L-ring protein FlgH [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415574|gb|EEX08833.1| flagellar L-ring protein FlgH [Silicibacter lacuscaerulensis
ITI-1157]
Length = 242
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 8/243 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + S +L L C + + P +SP S + +
Sbjct: 1 MTKLS-NLLVAVLALSAC-GRLDHLGKPPSLSPNTESPEHVAMLWPGLPMHTQPQRAVDR 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW +L D RA+ GDILTV I +D++A N T RSR+ S ++ G F L
Sbjct: 59 SSLWSGGQQSLLGDQRAMKKGDILTVVIELDEKAEISNDTSRSRSGSEDLQVPGLFGLPQ 118
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ ++ ++ D S GKGS+ R EKL L +AA V IL NG L I+GSQE
Sbjct: 119 RVAGHLPEGASLDEAVSIDSASVSKGKGSVKRKEKLTLRVAATVVDILPNGVLSIAGSQE 178
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN E+R L V+G VRPQD+ N ++YDKIA AR+SYGG+G+ +++ +P G Q+++
Sbjct: 179 LRVNFELRELLVSGYVRPQDISRQNEITYDKIASARVSYGGRGQISDVQQPRYGQQVLDA 238
Query: 235 LSP 237
L P
Sbjct: 239 LLP 241
>gi|254501335|ref|ZP_05113486.1| flagellar L-ring protein FlgH [Labrenzia alexandrii DFL-11]
gi|222437406|gb|EEE44085.1| flagellar L-ring protein FlgH [Labrenzia alexandrii DFL-11]
Length = 249
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 7/228 (3%)
Query: 17 GCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC S ++ + P ++ + P + SLW+ A FKD
Sbjct: 21 GCGSADRLANVGQQPALNAIQDPTTTPGYRPVQMPMPDPVQAHYNPNSLWQSGSRAFFKD 80
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-----LFGQQTPQMNGN 129
RA VGDILTV + ID++A +N T RSR + + G +F +
Sbjct: 81 QRASQVGDILTVVVSIDEKAEIENDTARSRTETNGAGVGGALGTAIDTIFLPAGTSASDL 140
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
N + +G G + R E+L +AA+VT +L NGNL+I G QE+RVN E+R L V GI
Sbjct: 141 GNVNSSSTFAGAGEVDREEELRTTVAAVVTQVLPNGNLVIEGRQEIRVNFEVRELIVAGI 200
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VRP+D+ ++N+++ +IAEARI YGG+G+ T++ +P G+Q+++ L P
Sbjct: 201 VRPEDITSNNTIASQQIAEARIGYGGRGQITDVQQPRYGNQVLDILLP 248
>gi|222147575|ref|YP_002548532.1| flagellar basal body L-ring protein [Agrobacterium vitis S4]
gi|254789275|sp|B9JRQ0|FLGH_AGRVS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|221734563|gb|ACM35526.1| flagellar L-ring protein precursor [Agrobacterium vitis S4]
Length = 237
Score = 228 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 129/238 (54%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + S V+ + +L GC + ++ E+ P MSP+GS L N+ P L K + +
Sbjct: 1 MIKRS-AVVLMAVILTGCGNKTLEEVGNAPAMSPVGSGL-RYNQAPQLASYPKQTKAVSN 58
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
YSLW DS AALFKDSRA+NVGD+LTV+I I D+A F N T RSR NS S +LF
Sbjct: 59 GYSLWNDSQAALFKDSRAINVGDLLTVNISIADKAKFKNDTSRSRKNSTSLTWSTVINLF 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G P +G+++ D +S GKGS+ R+E L L++AA+VT+ILENGNL+ISGSQEVRVN
Sbjct: 119 GITPPDSSGDMSTDSNSSSDGKGSVDRSETLTLMVAAVVTSILENGNLLISGSQEVRVNH 178
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R LNV GIVRPQDVDA N++SY+KIAEARISYGGKGR TE+ +PP+G Q+++ SP
Sbjct: 179 EVRILNVAGIVRPQDVDAKNTISYEKIAEARISYGGKGRLTEVQQPPVGQQVVDMFSP 236
>gi|149912836|ref|ZP_01901370.1| flagellar L-ring protein precursor [Roseobacter sp. AzwK-3b]
gi|149813242|gb|EDM73068.1| flagellar L-ring protein precursor [Roseobacter sp. AzwK-3b]
Length = 241
Score = 228 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ LL C + P +P ++++ M SLWR
Sbjct: 5 LCFSLIFLLGACA-RADHLGRAPTFTPTKNAVEHTAMMDPGLPLVAEPQRLVDQASLWRA 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+L D RAL GDILTV I ID++A N T RSR+ S + F L + ++
Sbjct: 64 GRTSLLGDRRALQKGDILTVRIEIDEEAEISNSTSRSRSGSDSLGIPQLFGLPQRLNEKL 123
Query: 127 N------GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
++ + S G GS+SR E+L L +AA V +L NG L I GSQEVRVN E
Sbjct: 124 PEGASMADAVSLNSNSRSDGDGSVSRREELTLRLAATVMEVLPNGVLAIKGSQEVRVNFE 183
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L VTG VRP+D+ N ++YDKIA ARISYGG+G+ +++ +P G Q+++ + P
Sbjct: 184 LRELLVTGYVRPEDISRQNEITYDKIAAARISYGGRGQISDMQQPRYGQQVLDMILP 240
>gi|110632652|ref|YP_672860.1| flagellar basal body L-ring protein [Mesorhizobium sp. BNC1]
gi|123058276|sp|Q11LN0|FLGH_MESSB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|110283636|gb|ABG61695.1| flagellar L-ring protein [Chelativorans sp. BNC1]
Length = 235
Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 149/238 (62%), Gaps = 5/238 (2%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + + + L + GC ++ E+ P +SP+GS + + D + + ++
Sbjct: 1 MNKIAGTLFLLAGLAMAGCTTT-EELGKPPALSPVGSGAEPTAMQAYHYPDRRQAHVSR- 58
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
YSLW D + LF D RAL VGDILTV I I+D+A F+N++ RSR + + L+G F++
Sbjct: 59 -YSLWSDRQSRLFTDPRALEVGDILTVVISINDKAKFENESERSRQATRNLGLAGTFAI- 116
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G T + + G ++ G G+ R+E + L+IAAIVT L NGNL ISG+QEVRVN
Sbjct: 117 GSATGSAEADADIGSGTSTVGSGATKRSEDMRLVIAAIVTERLPNGNLRISGTQEVRVNA 176
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R L + G+VRP D+ +N++SY++IAEARISYGG+GR TE+ +PP G Q ++ + P
Sbjct: 177 ELRVLTIAGLVRPADIGPNNTISYERIAEARISYGGRGRLTEVQQPPYGQQFLDTVLP 234
>gi|114706775|ref|ZP_01439675.1| flagellar L-ring protein precursor H [Fulvimarina pelagi HTCC2506]
gi|114537723|gb|EAU40847.1| flagellar L-ring protein precursor H [Fulvimarina pelagi HTCC2506]
Length = 235
Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 134/236 (56%), Gaps = 2/236 (0%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ LL GC ++ + P +SP+G+ + + + K T
Sbjct: 1 MTLRYAAPLVLVLLAGCSTNSQDAFREPALSPVGAGIYQYPNLVTPASFPK--GGTGAKN 58
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW DS A ++D RAL++GDI+TV I I D+A N + R R + + S
Sbjct: 59 SLWTDSRADFYQDPRALSMGDIVTVKINISDKASLANLSERERESGISGGADISGSFGSW 118
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
P + L DGG + G G + R+E + L +AA+VT L NGNL ISG QEVRVN E+
Sbjct: 119 ALPTVGATLGLDGGSDAKGSGRVKRSEDIELSVAAVVTQELPNGNLFISGQQEVRVNFEV 178
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R L++ GI+RP+D+ +N++ YDKIAEARISYGG+GR TE+ +P GHQ+ + +SP
Sbjct: 179 RVLSIAGIIRPRDILPNNTIDYDKIAEARISYGGRGRITEVQQPGWGHQVYDTVSP 234
>gi|170747258|ref|YP_001753518.1| flagellar basal body L-ring protein [Methylobacterium radiotolerans
JCM 2831]
gi|170653780|gb|ACB22835.1| flagellar L-ring protein [Methylobacterium radiotolerans JCM 2831]
Length = 249
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 7/227 (3%)
Query: 18 CHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
C++ +S++ P +S + + P + SLWR A FKD
Sbjct: 22 CNTADRLSQVGATPALSAIEDPTAQPGYKPVRMPMPDVQPVSYAPNSLWRTGSRAFFKDQ 81
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM-----NGNL 130
RA +GDILTV +++ DQA N+T RSR N+ L L + L
Sbjct: 82 RAAKLGDILTVKVKVTDQANISNETKRSRANTESFGLPNALGLENNTVGKSFGVGSTALL 141
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ A+ G GS+ R E + +AA+VT +L NGNL++ G QE+RVN E+R + V G+V
Sbjct: 142 SATSATANDGAGSVQRTESVTTNVAAVVTQVLPNGNLVVEGKQEIRVNFEVREMIVAGVV 201
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
RP+D+++ N++ KIA+ARI+YGG+G+ T++ +P G Q+++ L P
Sbjct: 202 RPEDIESDNTIDSAKIAQARIAYGGRGQITDVQQPRYGQQIVDILLP 248
>gi|217976229|ref|YP_002360376.1| flagellar L-ring protein [Methylocella silvestris BL2]
gi|217501605|gb|ACK49014.1| flagellar L-ring protein [Methylocella silvestris BL2]
Length = 233
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 134/238 (56%), Gaps = 5/238 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R I+ L GC + E+ P MSP+G+ L + + +
Sbjct: 1 MERAILILTMLC--LCGCAGDLRELGREPSMSPVGTGLMAEVQPTASALFLPAPKPDSR- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+W A +F D RA +GD++T++I I+D+A F N T RS ++++ L L
Sbjct: 58 -SIWSGGRADIFSDPRAAKIGDVVTINIGINDRASFGNTTDRSLDSAVGASLDWKLGL-N 115
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G+G+ RAEK+ L +AAIVT +L NGNLIISGSQEVRVN E
Sbjct: 116 NTRNEFKPEYLATAISKTKGEGNTDRAEKIQLSVAAIVTDVLPNGNLIISGSQEVRVNFE 175
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+R LNV GIVRP+D+ N++SYDK+AEARISYGG+GR E+ +P G Q+ + PL
Sbjct: 176 LRLLNVAGIVRPRDISKENTISYDKVAEARISYGGRGRIMEVQQPAWGQQVYDWFKPL 233
>gi|85715050|ref|ZP_01046035.1| flagellar L-ring protein precursor [Nitrobacter sp. Nb-311A]
gi|85698247|gb|EAQ36119.1| flagellar L-ring protein precursor [Nitrobacter sp. Nb-311A]
Length = 252
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 6/228 (2%)
Query: 16 FGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFK 73
GC S +S+I P+++ + + + P K + + SLWR+ A F+
Sbjct: 24 SGCSSINRLSQIGESPKLTAIDNPTTQPGYKPVQMPMPKPETVSYNANSLWRNGSRAFFR 83
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ----MNGN 129
D RA VGD+LTV + D+A NQT RSR N ++ P
Sbjct: 84 DQRAARVGDLLTVIVNFTDKANIANQTQRSRINKEDSGITDFIGSKTISNPATAVLPGRI 143
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
L D S GKGS+ R E L +AA+VT +L NGNL++ G QE+RVN+EIR L V GI
Sbjct: 144 LTTDSTSLSDGKGSVQRQENLQTRVAAVVTQLLPNGNLVVEGKQEIRVNNEIRELIVAGI 203
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VRP+D+ + N++ KIA+ARI+YGG+G+ +++ +P G Q+++ L P
Sbjct: 204 VRPEDIQSDNTIDSSKIAQARIAYGGRGQISDVQQPRYGQQVMDVLLP 251
>gi|296283230|ref|ZP_06861228.1| flagellar L-ring protein FlgH [Citromicrobium bathyomarinum JL354]
Length = 253
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 95/253 (37%), Positives = 136/253 (53%), Gaps = 17/253 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGS--------------SLDENNRM 44
M + I + +SLL GC + + + P MSP+ + + +
Sbjct: 1 MKKVVTIAV-TASLLSGCGTIDRLKNVGKAPSMSPVEAYTTPAYEPSIASTDPVRMRGTV 59
Query: 45 PFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
P + + + SL+R LF+D RA VGDILTV+I I D+A F N T RSR
Sbjct: 60 PTAPAPQAPAQAQAPNASLFRAGAGELFQDQRASRVGDILTVEINIADKAEFGNSTSRSR 119
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ S + L ++ AS G+GS +R+E +N+ +AAIVT +L N
Sbjct: 120 SGSESMGIGALLGLQDLLPGNPAQAVDATSNSASGGQGSTTRSETINMTMAAIVTDVLPN 179
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
GNL+I G QE+RVN E+R L VTGIVRPQD+ N++ + KIAEARISYGG+G+ T++ +
Sbjct: 180 GNLVIRGRQEMRVNFELRELIVTGIVRPQDIAKGNTIQHGKIAEARISYGGRGQLTDVQQ 239
Query: 225 PPIGHQLIENLSP 237
G Q+ E L P
Sbjct: 240 ARWGQQIYEALFP 252
>gi|62317106|ref|YP_222959.1| flagellar basal body L-ring protein [Brucella abortus bv. 1 str.
9-941]
gi|163844350|ref|YP_001622005.1| flagellar basal body L-ring protein [Brucella suis ATCC 23445]
gi|75495898|sp|Q579T6|FLGH_BRUAB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|110816524|sp|Q2YJ67|FLGH_BRUA2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|189044480|sp|A9WXL7|FLGH_BRUSI RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|62197299|gb|AAX75598.1| FlgH, flagellar L-ring protein [Brucella abortus bv. 1 str. 9-941]
gi|163675073|gb|ABY39183.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 238
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 1 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 58 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 116
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 117 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 176
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 177 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 236
Query: 237 P 237
P
Sbjct: 237 P 237
>gi|254691408|ref|ZP_05154662.1| flagellar basal body L-ring protein [Brucella abortus bv. 6 str.
870]
gi|256256594|ref|ZP_05462130.1| flagellar basal body L-ring protein [Brucella abortus bv. 9 str.
C68]
gi|260757022|ref|ZP_05869370.1| flagellar basal body L-ring protein [Brucella abortus bv. 6 str.
870]
gi|260882832|ref|ZP_05894446.1| flagellar L-ring protein [Brucella abortus bv. 9 str. C68]
gi|297249950|ref|ZP_06933651.1| flagellar L-ring protein FlgH [Brucella abortus bv. 5 str. B3196]
gi|260677130|gb|EEX63951.1| flagellar basal body L-ring protein [Brucella abortus bv. 6 str.
870]
gi|260872360|gb|EEX79429.1| flagellar L-ring protein [Brucella abortus bv. 9 str. C68]
gi|297173819|gb|EFH33183.1| flagellar L-ring protein FlgH [Brucella abortus bv. 5 str. B3196]
Length = 242
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQKPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|23499920|ref|NP_699360.1| flagellar basal body L-ring protein [Brucella suis 1330]
gi|161620240|ref|YP_001594126.1| flagellar basal body L-ring protein [Brucella canis ATCC 23365]
gi|254702580|ref|ZP_05164408.1| flagellar basal body L-ring protein [Brucella suis bv. 3 str. 686]
gi|260568512|ref|ZP_05838981.1| flagellar L-ring protein [Brucella suis bv. 4 str. 40]
gi|261753160|ref|ZP_05996869.1| flagellar L-ring protein [Brucella suis bv. 3 str. 686]
gi|31076710|sp|Q8FXC2|FLGH_BRUSU RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|189044479|sp|A9MDR7|FLGH_BRUC2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|23463497|gb|AAN33365.1| flagellar L-ring protein FlgH [Brucella suis 1330]
gi|161337051|gb|ABX63355.1| Flagellar L-ring protein precursor [Brucella canis ATCC 23365]
gi|260155177|gb|EEW90258.1| flagellar L-ring protein [Brucella suis bv. 4 str. 40]
gi|261742913|gb|EEY30839.1| flagellar L-ring protein [Brucella suis bv. 3 str. 686]
Length = 238
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 1 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 58 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 116
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 117 ITGAAAGGDMDASINTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 176
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 177 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 236
Query: 237 P 237
P
Sbjct: 237 P 237
>gi|225686016|ref|YP_002733988.1| flagellar basal body L-ring protein [Brucella melitensis ATCC
23457]
gi|31076715|sp|Q8YB19|FLGH_BRUME RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789277|sp|C0RKA1|FLGH_BRUMB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|225642121|gb|ACO02034.1| Flagellar L-ring protein precursor [Brucella melitensis ATCC 23457]
Length = 238
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 142/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 1 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW + FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 58 -SLWDQRSSNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 116
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 117 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 176
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 177 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 236
Query: 237 P 237
P
Sbjct: 237 P 237
>gi|209963567|ref|YP_002296482.1| flagellar L-ring protein FlgH [Rhodospirillum centenum SW]
gi|209957033|gb|ACI97669.1| flagellar L-ring protein FlgH [Rhodospirillum centenum SW]
Length = 245
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GC + P MSP+ + S ++ SLWR +D
Sbjct: 16 LPGCAGQFDHLGRAPAMSPIEDPGMQTEARLVRMPMPVPSTEARQPASLWRTGSTGFLRD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL---- 130
RA VGDI+TV I + +QA NQT RSR + L + + +
Sbjct: 76 LRAKRVGDIVTVVIDMSEQAQIRNQTQRSRASGEQMGTPNFLGLESRLGAVLPDAVDPER 135
Query: 131 --NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
N + +S+G GS++R E++ L +AA+VT +L NGNL+I+G QEVRVN E+R L + G
Sbjct: 136 LVNLNSSSSSTGAGSVNRQEQIQLKVAAVVTDVLPNGNLVIAGKQEVRVNFELRELRIAG 195
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
++RP+D+ N +SY+KIAEARI+YGG+G+ T++ +P IG Q+++ + P
Sbjct: 196 VIRPEDISTRNIISYEKIAEARIAYGGRGQITDVQQPRIGQQVLDVVLP 244
>gi|254475405|ref|ZP_05088791.1| flagellar L-ring protein FlgH [Ruegeria sp. R11]
gi|214029648|gb|EEB70483.1| flagellar L-ring protein FlgH [Ruegeria sp. R11]
Length = 246
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 1 MYRYSFIV---LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + F L +L C + + P SP + + + +
Sbjct: 1 MNKKLFSAKTALMGVVMLSAC-GRMDHVGKPPSFSPANETPEHVAMLFQGLPTDTQTQRP 59
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW S +L D RA GDILTV I ID++A N T RSR+ S +
Sbjct: 60 VDQASLWSGSRQSLLGDRRATKRGDILTVVIEIDEEAEISNDTKRSRSGSESLAMPQLLG 119
Query: 118 LFGQQ------TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
L + ++ S GKGS+ R+E+L L +AA V +L NG L ISG
Sbjct: 120 LPQRLDRHLPEGATAADAVDLSSTSQSGGKGSVKRSERLELRVAATVVDVLPNGVLAISG 179
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+QE+RVN E+R L VTG VRP D+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+
Sbjct: 180 TQELRVNFELRELLVTGYVRPDDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQV 239
Query: 232 IENLSP 237
++ + P
Sbjct: 240 LDVILP 245
>gi|90418388|ref|ZP_01226300.1| flagellar L-ring protein FlgH [Aurantimonas manganoxydans SI85-9A1]
gi|90338060|gb|EAS51711.1| flagellar L-ring protein FlgH [Aurantimonas manganoxydans SI85-9A1]
Length = 234
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 134/219 (61%), Gaps = 1/219 (0%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC ++ ++ P +SP+G+ L E + F S S+SLW D+ A ++D R
Sbjct: 14 GCSTAGNDALREPSLSPVGAGLYEYPPIIAQPASFPASKP-HTSHSLWSDARADFYQDPR 72
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
AL+ GDI+TV IRI DQA DN + RSR + + L +L P + L D
Sbjct: 73 ALSEGDIVTVKIRIRDQASIDNNSERSRKSGIAAGLDLAGNLGQYTLPTVGAQLGSDNSS 132
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
+GKG I R+E ++L +AA+V L NGNL ISG QEVRVN E+R L++ GI+RP+D+
Sbjct: 133 DMTGKGKIKRSEDIDLSVAAVVGQKLPNGNLFISGQQEVRVNFEVRVLSIAGIIRPRDIL 192
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
N+++YDKIAEARISYGG+GR T++ +P G Q+ + +
Sbjct: 193 PDNTINYDKIAEARISYGGRGRITDVQQPGWGQQIYDAV 231
>gi|83269098|ref|YP_418389.1| flagellar basal body L-ring protein [Brucella melitensis biovar
Abortus 2308]
gi|189022371|ref|YP_001932112.1| flagellar basal body L-ring protein [Brucella abortus S19]
gi|237816668|ref|ZP_04595660.1| Flagellar L-ring protein precursor [Brucella abortus str. 2308 A]
gi|254698389|ref|ZP_05160217.1| flagellar basal body L-ring protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254731836|ref|ZP_05190414.1| flagellar basal body L-ring protein [Brucella abortus bv. 4 str.
292]
gi|260544345|ref|ZP_05820166.1| flagellar L-ring protein [Brucella abortus NCTC 8038]
gi|260759606|ref|ZP_05871954.1| flagellar basal body L-ring protein [Brucella abortus bv. 4 str.
292]
gi|260762848|ref|ZP_05875180.1| flagellar basal body L-ring protein [Brucella abortus bv. 2 str.
86/8/59]
gi|294853180|ref|ZP_06793852.1| flagellar L-ring protein FlgH [Brucella sp. NVSL 07-0026]
gi|82939372|emb|CAJ12322.1| Flagellar L-ring protein [Brucella melitensis biovar Abortus 2308]
gi|189020945|gb|ACD73666.1| Flagellar L-ring protein [Brucella abortus S19]
gi|237787481|gb|EEP61697.1| Flagellar L-ring protein precursor [Brucella abortus str. 2308 A]
gi|260097616|gb|EEW81490.1| flagellar L-ring protein [Brucella abortus NCTC 8038]
gi|260669924|gb|EEX56864.1| flagellar basal body L-ring protein [Brucella abortus bv. 4 str.
292]
gi|260673269|gb|EEX60090.1| flagellar basal body L-ring protein [Brucella abortus bv. 2 str.
86/8/59]
gi|294818835|gb|EFG35835.1| flagellar L-ring protein FlgH [Brucella sp. NVSL 07-0026]
Length = 242
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|225628629|ref|ZP_03786663.1| Flagellar L-ring protein precursor [Brucella ceti str. Cudo]
gi|254706288|ref|ZP_05168116.1| flagellar basal body L-ring protein [Brucella pinnipedialis
M163/99/10]
gi|254711418|ref|ZP_05173229.1| flagellar basal body L-ring protein [Brucella pinnipedialis B2/94]
gi|256029952|ref|ZP_05443566.1| flagellar basal body L-ring protein [Brucella pinnipedialis
M292/94/1]
gi|256158114|ref|ZP_05456032.1| flagellar basal body L-ring protein [Brucella ceti M490/95/1]
gi|256252932|ref|ZP_05458468.1| flagellar basal body L-ring protein [Brucella ceti B1/94]
gi|261220023|ref|ZP_05934304.1| flagellar L-ring protein [Brucella ceti B1/94]
gi|261313732|ref|ZP_05952929.1| flagellar L-ring protein [Brucella pinnipedialis M163/99/10]
gi|261319026|ref|ZP_05958223.1| flagellar L-ring protein [Brucella pinnipedialis B2/94]
gi|265986971|ref|ZP_06099528.1| flagellar L-ring protein [Brucella pinnipedialis M292/94/1]
gi|265996631|ref|ZP_06109188.1| flagellar L-ring protein [Brucella ceti M490/95/1]
gi|225616475|gb|EEH13523.1| Flagellar L-ring protein precursor [Brucella ceti str. Cudo]
gi|260918607|gb|EEX85260.1| flagellar L-ring protein [Brucella ceti B1/94]
gi|261298249|gb|EEY01746.1| flagellar L-ring protein [Brucella pinnipedialis B2/94]
gi|261302758|gb|EEY06255.1| flagellar L-ring protein [Brucella pinnipedialis M163/99/10]
gi|262550928|gb|EEZ07089.1| flagellar L-ring protein [Brucella ceti M490/95/1]
gi|264659168|gb|EEZ29429.1| flagellar L-ring protein [Brucella pinnipedialis M292/94/1]
Length = 242
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII G QEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGLQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|148558224|ref|YP_001257216.1| flagellar basal body L-ring protein [Brucella ovis ATCC 25840]
gi|148369509|gb|ABQ62381.1| flagellar L-ring protein FlgH [Brucella ovis ATCC 25840]
Length = 242
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS--- 117
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFAASS 120
Query: 118 -LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|256014946|ref|YP_003104955.1| flagellar L-ring protein precursor [Brucella microti CCM 4915]
gi|255997606|gb|ACU49293.1| flagellar L-ring protein precursor [Brucella microti CCM 4915]
Length = 238
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 1 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 58 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 116
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 117 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 176
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 177 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRVSEIQQPPYGQQILDQFS 236
Query: 237 P 237
P
Sbjct: 237 P 237
>gi|17989427|ref|NP_542060.1| flagellar basal body L-ring protein [Brucella melitensis bv. 1 str.
16M]
gi|256043077|ref|ZP_05446021.1| flagellar basal body L-ring protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256262861|ref|ZP_05465393.1| flagellar L-ring protein [Brucella melitensis bv. 2 str. 63/9]
gi|260564307|ref|ZP_05834792.1| flagellar L-ring protein [Brucella melitensis bv. 1 str. 16M]
gi|265989515|ref|ZP_06102072.1| flagellar L-ring protein [Brucella melitensis bv. 1 str. Rev.1]
gi|17985304|gb|AAL54324.1| flagellar l-ring protein flgh [Brucella melitensis bv. 1 str. 16M]
gi|260151950|gb|EEW87043.1| flagellar L-ring protein [Brucella melitensis bv. 1 str. 16M]
gi|263000184|gb|EEZ12874.1| flagellar L-ring protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263092696|gb|EEZ16905.1| flagellar L-ring protein [Brucella melitensis bv. 2 str. 63/9]
gi|326410339|gb|ADZ67403.1| flagellar basal body L-ring protein [Brucella melitensis M28]
gi|326553631|gb|ADZ88270.1| flagellar basal body L-ring protein [Brucella melitensis M5-90]
Length = 242
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 142/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW + FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSSNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|149203123|ref|ZP_01880094.1| flagellar L-ring protein precursor H [Roseovarius sp. TM1035]
gi|149143669|gb|EDM31705.1| flagellar L-ring protein precursor H [Roseovarius sp. TM1035]
Length = 244
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/243 (35%), Positives = 128/243 (52%), Gaps = 6/243 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ LL + + + P +P +S ++ + ++ +
Sbjct: 1 MTALRLNLIFVVVLLAASCARLDHLGKPPSFTPTMNSTEQLAMLDPGLPRSTAQNAPFQQ 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW +L D RA GDI+TV I ID++A N T RSR+ S + F +
Sbjct: 61 ASLWSGGKQSLLGDRRAAQRGDIMTVVIEIDEEAQISNSTSRSRDGSESLAIPDLFGIPQ 120
Query: 121 QQTPQMNGNLNYDG------GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + + D S G+GS+SR+E+L L +AA V +L NG L I GSQE
Sbjct: 121 RINRNLPEGASLDRAAGLNSTSQSGGEGSVSRSEELTLRVAATVMQVLPNGVLEIQGSQE 180
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VRVN E+R L V+G VRP+D+ N ++YDKIA ARISYGG+G+ T++ +P IG QL++
Sbjct: 181 VRVNFELRELLVSGFVRPEDISRQNEITYDKIAAARISYGGRGQITDVQQPRIGQQLLDG 240
Query: 235 LSP 237
L P
Sbjct: 241 LLP 243
>gi|296534163|ref|ZP_06896656.1| flagellar L-ring protein FlgH [Roseomonas cervicalis ATCC 49957]
gi|296265509|gb|EFH11641.1| flagellar L-ring protein FlgH [Roseomonas cervicalis ATCC 49957]
Length = 246
Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 1/218 (0%)
Query: 21 SISEITGIPQMSPMGSSLDENN-RMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALN 79
ISEI PQ++P+ + ++ SLWR +D RA
Sbjct: 28 RISEIGRGPQLAPIENPAQVAGLERTVAMPMPPAQAPLPETNSLWRPGSRTFLRDQRAAQ 87
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
VGD++TV ++I D+A +N T RSR N+ ++ + + L +
Sbjct: 88 VGDLVTVLVQITDKAELENTTARSRANNEDFGITRLLGMAARLPGGAGNLLETASNSGTE 147
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
G GSI+R E + L +AA V +L NGNL+++G Q+VRVN E+R L V+GI+R QD+ + N
Sbjct: 148 GTGSINRNETVTLRVAATVVQMLPNGNLVVAGRQQVRVNHELRELQVSGIIRSQDIASDN 207
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V +D++AEARI+YGG+G +++ +P G Q ++ + P
Sbjct: 208 TVRHDRLAEARIAYGGRGIISDVQQPRYGQQFLDLVLP 245
>gi|254695294|ref|ZP_05157122.1| flagellar basal body L-ring protein [Brucella abortus bv. 3 str.
Tulya]
gi|261215663|ref|ZP_05929944.1| flagellar basal body L-ring protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917270|gb|EEX84131.1| flagellar basal body L-ring protein [Brucella abortus bv. 3 str.
Tulya]
Length = 242
Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 142/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R ++ G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSNGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|312115245|ref|YP_004012841.1| flagellar L-ring protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220374|gb|ADP71742.1| flagellar L-ring protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 96/244 (39%), Positives = 141/244 (57%), Gaps = 9/244 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + +L GC + ++EI P ++P+G+ L + +G S
Sbjct: 1 MKICTLAAAATTLMLGGCFNRMNEIGREPGLTPVGAGLVPAHTA--IGTMPATPASYVTR 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW+D+ A LFKD RA VGD++TV I I D+A DN RSR+++ ++ +L
Sbjct: 59 ASLWQDNGADLFKDPRATKVGDVITVKISIKDKASIDNNNSRSRSSTRELDITNKANLSW 118
Query: 121 QQTPQMNGNLNYDG-------GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + ++ KG ISRAE +NLLI A+VT +L NGNLI++G Q
Sbjct: 119 SGLNKHLDTQSSGELDPKVESTTSTDAKGGISRAESINLLIGAVVTEVLPNGNLIVAGRQ 178
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
EVRVN E+R L ++GI+RP+D+ NS+SYDKIAEARISYGG+GR ++ +P G Q+ +
Sbjct: 179 EVRVNFELRELLISGIIRPRDIATDNSISYDKIAEARISYGGRGRIMDVAQPAWGQQVTD 238
Query: 234 NLSP 237
L P
Sbjct: 239 WLLP 242
>gi|56695098|ref|YP_165445.1| flagellar basal body L-ring protein [Ruegeria pomeroyi DSS-3]
gi|81350864|sp|Q5LWX7|FLGH_SILPO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|56676835|gb|AAV93501.1| flagellar L-ring protein FlgH [Ruegeria pomeroyi DSS-3]
Length = 246
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 10/246 (4%)
Query: 1 MYRYSFI---VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + ++ +L C + P +P S + + +
Sbjct: 1 MMQKCLSPKTLIAALVVLSAC-GRADHLGKAPSFTPNTESPEHVAMLWPGLPLHTQPQRS 59
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW +L D RA+ GDILTV I ID++A N T RSR+ S +
Sbjct: 60 VDRASLWSGGQNSLLGDQRAMKKGDILTVVIEIDEKAEISNDTNRSRSGSESLGVPHLLG 119
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGS------ISRAEKLNLLIAAIVTAILENGNLIISG 171
L + ++ + A + + R EKL L +AA V +L NG L I+G
Sbjct: 120 LPQRIDEKLPEGASMSNAVAVDSSSASGGKGSVKRKEKLTLRVAATVVDVLPNGVLSITG 179
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
SQE+RVN E+R L V+G VRP+D+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+
Sbjct: 180 SQELRVNFELRELLVSGYVRPEDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQV 239
Query: 232 IENLSP 237
++ + P
Sbjct: 240 LDMVLP 245
>gi|306838568|ref|ZP_07471405.1| flagellar basal body L-ring protein [Brucella sp. NF 2653]
gi|306406354|gb|EFM62596.1| flagellar basal body L-ring protein [Brucella sp. NF 2653]
Length = 238
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 138/241 (57%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 1 MNKAILAA-AMVFLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 58 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 116
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 117 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 176
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 177 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 236
Query: 237 P 237
P
Sbjct: 237 P 237
>gi|256111939|ref|ZP_05452890.1| flagellar basal body L-ring protein [Brucella melitensis bv. 3 str.
Ether]
gi|265993386|ref|ZP_06105943.1| flagellar L-ring protein [Brucella melitensis bv. 3 str. Ether]
gi|262764256|gb|EEZ10288.1| flagellar L-ring protein [Brucella melitensis bv. 3 str. Ether]
Length = 242
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW + FKD RA GD+LTV I I+D+A DN+ R R + G F+
Sbjct: 62 -SLWDQRSSNFFKDPRAATPGDVLTVIISINDRANLDNKADRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|254720606|ref|ZP_05182417.1| flagellar basal body L-ring protein [Brucella sp. 83/13]
gi|265985646|ref|ZP_06098381.1| flagellar L-ring protein [Brucella sp. 83/13]
gi|264664238|gb|EEZ34499.1| flagellar L-ring protein [Brucella sp. 83/13]
Length = 242
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 138/241 (57%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNKAILAA-AMVFLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L NGNLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|260466615|ref|ZP_05812803.1| flagellar L-ring protein [Mesorhizobium opportunistum WSM2075]
gi|259029621|gb|EEW30909.1| flagellar L-ring protein [Mesorhizobium opportunistum WSM2075]
Length = 236
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 145/239 (60%), Gaps = 6/239 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +VLC + L GC +++ E+ P +SP+GS +D + KK
Sbjct: 1 MIRR-MLVLCAVAALSGCGTNLKEVGKEPALSPVGSGIDGGDTGSLYKYPETPRAPVKK- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS--LHRKLSGGFSL 118
+SLW D + LF D RAL+ GDILTV I+I+D+A F NQ RSR + L +S +
Sbjct: 59 FSLWDDRQSRLFTDPRALSQGDILTVRIKINDRANFKNQNDRSRTANRKLGFDISAQWDK 118
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
G + G LN + G+ I R+E L L +AAIVT +L NGNL+I+GSQEVRVN
Sbjct: 119 IGSTAGKGAGALNSQTDTTADGE--IKRSETLELNVAAIVTDVLPNGNLMITGSQEVRVN 176
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R L + GIVRP D+ A N++ Y++IAEARISYGG+GR TE+ +P G Q+++ + P
Sbjct: 177 AELRVLTIAGIVRPADIGAENTIPYERIAEARISYGGRGRITEVQQPAYGQQVLDQVLP 235
>gi|254473379|ref|ZP_05086776.1| flagellar L-ring protein FlgH [Pseudovibrio sp. JE062]
gi|211957495|gb|EEA92698.1| flagellar L-ring protein FlgH [Pseudovibrio sp. JE062]
Length = 236
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 148/236 (62%), Gaps = 1/236 (0%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + + + + L GC++ + + P ++P+G L + + S + +
Sbjct: 1 MKRTLVCILAAITLTGCNA-MKNVGKEPHLTPLGQGLQPSVASLPATPAKSSGRSNRAYH 59
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
LW D F+D RA VGD+LTV I+I D+A DN + R R++S L G FS G
Sbjct: 60 GLWADGEQDFFRDPRAKQVGDVLTVAIKIKDKAKLDNSSERKRDSSRSTGLKGAFSWAGV 119
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + + +++ G AS G+G+I R+E+++L IAA+VT +L NGNLIISG QEVRVN E+
Sbjct: 120 DSGEADASISGTGATASKGEGAIDRSEEIDLSIAAVVTKVLRNGNLIISGQQEVRVNYEV 179
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R L+V GIVRP+D+ N++ YDKIAEAR+SYGG+GR TE+ +P +G Q+I+ +SP
Sbjct: 180 RVLSVAGIVRPEDITGRNTIQYDKIAEARVSYGGRGRMTEVQQPSVGQQVIDIISP 235
>gi|319781677|ref|YP_004141153.1| flagellar L-ring protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167565|gb|ADV11103.1| flagellar L-ring protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 235
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 99/237 (41%), Positives = 142/237 (59%), Gaps = 3/237 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +VLC ++L GC +++ E+ P +SP+GS +D + KK
Sbjct: 1 MIRK-MLVLCAVAMLSGCGTNLKEVGREPALSPVGSGIDGGSTGSLYRYPQTPPAPVKK- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+SLW D + LF D RAL+ GDILTV I+I+D+A F NQ RSR + + +
Sbjct: 59 FSLWDDRQSRLFTDPRALSQGDILTVKIKINDRANFKNQNDRSRTANRKLGYD-LSAQWD 117
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G ++ G I R+E L L +AAIVT +L NGNL+I+GSQEVRVN E
Sbjct: 118 KWSTAGKGAGALSSTTDTTADGEIKRSETLELNVAAIVTDVLPNGNLMITGSQEVRVNAE 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L + GIVRP D+ A N++ Y++IAEARISYGG+GR TE+ +P G Q+++ + P
Sbjct: 178 LRVLTLAGIVRPADIGAENTIPYERIAEARISYGGRGRITEVQQPAYGQQILDQVLP 234
>gi|162147476|ref|YP_001601937.1| flagellar basal body L-ring protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545585|ref|YP_002277814.1| flagellar basal body L-ring protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786053|emb|CAP55635.1| putative flagellar L-ring protein precursor [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533262|gb|ACI53199.1| flagellar L-ring protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 250
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 4/235 (1%)
Query: 7 IVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ L GC S +SE P+M+ + P + SLW
Sbjct: 15 AAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPMPPLQAPPTEVGSLW 74
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ--Q 122
R + FKD RA VGD++T+ +++ D A N T + + S + F L G+
Sbjct: 75 RPGSRSFFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDFGIPSIFGLKGKVAS 134
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ LN A++ G I+R E + L + +T +L NGN ++ QEVRVN E+R
Sbjct: 135 HLSSSSALNTSSATANTATGRITRTEAVGLTLGGTITQVLPNGNFVVVARQEVRVNGELR 194
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L V+G+VRPQD+ N+V++D+IAEARISYGG+G+ T+L P G Q+++N+ P
Sbjct: 195 QLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYGQQILDNVLP 249
>gi|153011520|ref|YP_001372734.1| flagellar basal body L-ring protein [Ochrobactrum anthropi ATCC
49188]
gi|151563408|gb|ABS16905.1| flagellar L-ring protein [Ochrobactrum anthropi ATCC 49188]
Length = 242
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 139/241 (57%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + LL GC + EI P +SP+ + + +K +
Sbjct: 5 MNK-ATLTAAVLVLLAGCATKPEEIGRAPDLSPV---AAHLGMQNNPQSNGYPARPSKAT 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF---- 116
YSLW FKD RA GD+LTV I I+D+A DN+T R R + G F
Sbjct: 61 YSLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGAGGSFATSS 120
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
S M+ +LN S GKG+I R+E + L +AAIVT L NGN+II GSQEVR
Sbjct: 121 STGAGAGGDMDASLNTHSDSKSKGKGTIERSEDIRLQVAAIVTDTLPNGNMIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ +S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQVS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|163758019|ref|ZP_02165107.1| flagellar L-ring protein [Hoeflea phototrophica DFL-43]
gi|162284308|gb|EDQ34591.1| flagellar L-ring protein [Hoeflea phototrophica DFL-43]
Length = 239
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 112/241 (46%), Positives = 154/241 (63%), Gaps = 5/241 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + + + L GC + + E+ P MSP+G+ L P + K +
Sbjct: 1 MNR-AVAITILALSLGGCSAQTLKEVGRAPSMSPVGAGL-AYGETPQMAAYPKQPMPRSQ 58
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL- 118
+SLW D+ + LF+D+RA++VGDILTVD+ I+D+A FDN T RSR NS L
Sbjct: 59 GFSLWDDNKSKLFQDARAMSVGDILTVDLAINDKATFDNATDRSRQNSSGINAGFNLPLL 118
Query: 119 -FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G+L + ++SG+G+ R+E+L L IAA+VT IL NGNL+ISGSQEVRV
Sbjct: 119 EGLGIGAVNEGDLEFGSNTSTSGQGTTERSEQLELRIAAVVTGILPNGNLVISGSQEVRV 178
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R LNV GIVRP DVD +N+V+YDKIAEAR+SYGG+GR E+ +PP+G QL++ LSP
Sbjct: 179 NQELRILNVAGIVRPLDVDHNNTVAYDKIAEARVSYGGRGRLMEVQQPPVGQQLVDILSP 238
Query: 238 L 238
+
Sbjct: 239 I 239
>gi|256059605|ref|ZP_05449803.1| flagellar basal body L-ring protein [Brucella neotomae 5K33]
gi|261323572|ref|ZP_05962769.1| flagellar L-ring protein [Brucella neotomae 5K33]
gi|261299552|gb|EEY03049.1| flagellar L-ring protein [Brucella neotomae 5K33]
Length = 242
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F+
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSS 120
Query: 119 --FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
M+ ++N S GKG+I R+E + L IAAIVT L N NLII GSQEVR
Sbjct: 121 ITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNANLIIRGSQEVR 180
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E+R LNV G+VRP+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ S
Sbjct: 181 VNNELRVLNVAGVVRPRDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFS 240
Query: 237 P 237
P
Sbjct: 241 P 241
>gi|288962680|ref|YP_003452974.1| flagellar L-ring protein precursor [Azospirillum sp. B510]
gi|288914946|dbj|BAI76430.1| flagellar L-ring protein precursor [Azospirillum sp. B510]
Length = 249
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 7/228 (3%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
GC +++I P +S + + + + S + + SLWR F+D
Sbjct: 22 GGCA-RLADIGSAPTLSEINNPALQPEARVISLPMPQPSMAEQIPSSLWRTGSRDFFRDP 80
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL----- 130
RA +VGD+LTV I I DQA N T R R+NS L L + + +
Sbjct: 81 RAKSVGDLLTVVIDISDQAQMRNSTQRGRSNSEKEGLPNFLGLESRLPAVLPDAVDPSNL 140
Query: 131 -NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
N D S+G G+I R E++ + +AA+VT +L NGN +I+G QEVRVN E+R + + G+
Sbjct: 141 VNLDSTSNSTGNGTIQRNERIAMRVAAVVTQVLPNGNFVIAGRQEVRVNFELREMRIAGV 200
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+RP+D+ N++ YDKIAEARI+YGG+G+ T++ +P G Q+++ + P
Sbjct: 201 IRPEDISNANTIEYDKIAEARITYGGRGQITDVQQPRYGQQVLDVILP 248
>gi|254470268|ref|ZP_05083672.1| flagellar L-ring protein FlgH [Pseudovibrio sp. JE062]
gi|211960579|gb|EEA95775.1| flagellar L-ring protein FlgH [Pseudovibrio sp. JE062]
Length = 253
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 7/238 (2%)
Query: 7 IVLCYSSLLFGC--HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
V L GC +S++ P ++ + + P + SLW
Sbjct: 15 AVAIGLLALAGCETADKLSKVGQEPALTAIQDPRTQPGYRPVQMPMPVKETERYNANSLW 74
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG-----GFSLF 119
R + A F+D RA +GDI+TV++ I D+A F+N + SR+++ + G +L
Sbjct: 75 RTGNRAFFQDQRAKRIGDIVTVNVTISDEAAFENSSRSSRSDAKNSGAGGALGAAINTLA 134
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + + G GSI R E L +AA+VT +L N NL+I G QEVRVN
Sbjct: 135 LPASASADALASINSSDTFQGSGSIDRTESLKTTVAAVVTQVLPNSNLVIEGRQEVRVNH 194
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R L V G++RPQD+ + N+V KIAEARI YGG+G+ + +P G Q+++ + P
Sbjct: 195 EVRELIVAGVIRPQDIASDNTVESTKIAEARIGYGGRGQISVAQQPRYGSQVLDIVLP 252
>gi|118589977|ref|ZP_01547381.1| flagellar L-ring protein precursor H [Stappia aggregata IAM 12614]
gi|118437474|gb|EAV44111.1| flagellar L-ring protein precursor H [Stappia aggregata IAM 12614]
Length = 230
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/231 (40%), Positives = 140/231 (60%), Gaps = 2/231 (0%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ +++L GC + ++ P+M+P+G L + F + K SLW
Sbjct: 1 MFSFGAAMLTGCAGQLEDVGRAPEMTPVGYGLAVQQPAAYPLSTFGQG-TVKDYNSLWAS 59
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
F D RA VGD+LTV I+I+D+A DN++ R R + + + + G
Sbjct: 60 GRDNFFADPRAKKVGDVLTVTIQINDRANMDNKSDRRRTSDIGWGGTMDYDWDGIGHGG- 118
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
+GNL D G S+G GSI R+E++ L +AA+VT L NGNL+ISGSQE+RVN E+R L +
Sbjct: 119 SGNLGVDSGSGSAGSGSIDRSEEIQLSVAAVVTDRLPNGNLVISGSQEMRVNFEMRILQI 178
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
GIVRP+D+ A+N++ YDKIAEAR+SYGG+GR TE+ +P G Q+ + ++P
Sbjct: 179 AGIVRPRDIQANNTIPYDKIAEARVSYGGRGRITEVQQPAWGQQIYDIVTP 229
>gi|13472580|ref|NP_104147.1| flagellar basal body L-ring protein [Mesorhizobium loti MAFF303099]
gi|20138306|sp|Q98HD3|FLGH_RHILO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|14023326|dbj|BAB49933.1| flagellar L-ring protein; FlgH [Mesorhizobium loti MAFF303099]
Length = 235
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 99/237 (41%), Positives = 142/237 (59%), Gaps = 3/237 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + I LC + L GC +++ E+ P +SP+GS +D N KK
Sbjct: 1 MIRRTLI-LCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKK- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+SLW D + LF D RAL+ GDILTV I+I+D+A F NQ RSR + + +
Sbjct: 59 FSLWDDRQSRLFTDPRALSQGDILTVRIKINDRANFKNQNDRSRTANRKLGFD-LSAQWD 117
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G + ++ G I R+E L L +AAIVT +L NGNL+I+GSQEVRVN E
Sbjct: 118 KWSTAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLPNGNLMITGSQEVRVNAE 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L + GIVRP D+ A N++ Y++IAEARISYGG+GR +E+ +P G Q+++ + P
Sbjct: 178 LRVLTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLP 234
>gi|78221654|ref|YP_383401.1| flagellar L-ring protein [Geobacter metallireducens GS-15]
gi|110816530|sp|Q39YJ8|FLGH_GEOMG RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|78192909|gb|ABB30676.1| Flagellar L-ring protein [Geobacter metallireducens GS-15]
Length = 226
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 26/244 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + +LC + L GC +E+ R P + S
Sbjct: 1 MKRLAVSILCLA--LAGCAIEKAEV-----------------RTPSFDEQLPAPQPSYAS 41
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+W+ + A + +D +A GDI+TV I + A T R S+ + L
Sbjct: 42 GSIWQAASAGIAEDHKARRKGDIITVVIVENASASKQATTDTDRKASISASIPYLMGLEK 101
Query: 121 Q-------QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
Q + L G G+ +R E L ++A + +L NGN +I G +
Sbjct: 102 QKLILGKLTGADLGNLLGASTDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGRR 161
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
V+VN+E + + + G VRP+DV N+V+ IA+ARI+Y G+G ++ RP ++
Sbjct: 162 NVKVNNEDQIIILQGTVRPRDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLD 221
Query: 234 NLSP 237
+ P
Sbjct: 222 YIWP 225
>gi|126730132|ref|ZP_01745944.1| flagellar L-ring protein precursor H [Sagittula stellata E-37]
gi|126709512|gb|EBA08566.1| flagellar L-ring protein precursor H [Sagittula stellata E-37]
Length = 246
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 127/243 (52%), Gaps = 8/243 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +F+ + + C ++ I P +P S + + +
Sbjct: 5 MLRVTFL-IALVATASACA-RMNHIGKAPDFTPQTESTERVAMVASGIPEAAPPGRASDG 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW A+L D RA+ GDILTV I IDD A N T RSRN S + F +
Sbjct: 63 ASLWSAGQASLLGDRRAMKRGDILTVVILIDDSAEIQNSTSRSRNGSESLAIPDLFGVPE 122
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ ++ + +S G GS+ R+E L L IAA V +L NG L I GSQE
Sbjct: 123 RINQGITDGASLDSAVDLNSSASSGGDGSVRRSESLTLRIAATVVDVLPNGILSIEGSQE 182
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VRVN E+R L V+G VRP+D+ N ++YDKIA ARISYGG+G+ T++ +P IG Q+++
Sbjct: 183 VRVNFELRELLVSGYVRPEDISRQNEITYDKIASARISYGGRGQITDVQQPRIGQQVLDA 242
Query: 235 LSP 237
+ P
Sbjct: 243 ILP 245
>gi|294679029|ref|YP_003579644.1| flagellar L-ring protein FlgH [Rhodobacter capsulatus SB 1003]
gi|294477849|gb|ADE87237.1| flagellar L-ring protein FlgH [Rhodobacter capsulatus SB 1003]
Length = 241
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 7/240 (2%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
S + + + L C + ++ P + + S + + + + SL
Sbjct: 2 RSLLFVFMALSLAAC-GRLEQVGKAPDFNTVEGSDEFFAMNSPPLPEDALRQTRAQEASL 60
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
W + +L D RA GDILTV I IDD+A N +GRSR +S + F + +
Sbjct: 61 WSGNRGSLLGDRRAATRGDILTVVIEIDDKAEISNTSGRSRKSSDKMGIPSMFGIPQRLD 120
Query: 124 PQMN------GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
Q+ + G GS++R EKL L +AA V L NG L I GSQEVRV
Sbjct: 121 AQLPEGATMADAFETGSSSSYKGDGSVARKEKLTLRVAATVLDRLPNGVLRIQGSQEVRV 180
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E+R L VTG VRP+DV N ++YDKIA ARISYGG+G+ T++ +P G Q+ + L P
Sbjct: 181 NFEVRELIVTGFVRPEDVSRQNEITYDKIAGARISYGGRGQITDVQQPRYGQQVSDILLP 240
>gi|255263180|ref|ZP_05342522.1| flagellar L-ring protein [Thalassiobium sp. R2A62]
gi|255105515|gb|EET48189.1| flagellar L-ring protein [Thalassiobium sp. R2A62]
Length = 246
Score = 218 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 78/243 (32%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ GC + + P+++P+ S+++ M +
Sbjct: 6 MNSKFILPIFL--IMSGCA-RMESVGQEPEITPVRSTIEHTAMMTPSLPQTLVQTPPVAN 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW +LF D RA GDILTV I IDD+A N + R+R+ S + + F +
Sbjct: 63 ASLWSGGRESLFGDKRAATRGDILTVVIEIDDKAEISNSSNRARSGSENLSVPSLFGIPQ 122
Query: 121 QQTPQMNGNLNYDGGGASSGKGSIS------RAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + + + + S R EKL L +AA V +L NG L I G+QE
Sbjct: 123 RVDQSLPEGATLSEAVSLNSSSASSGNGSVSRNEKLTLRVAATVVDVLPNGVLSIQGTQE 182
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VRVN E+R L V+G VRP+D+ N ++YDKIA AR+SYGG+G+ +++ +P G Q+ +
Sbjct: 183 VRVNFELRELLVSGFVRPKDITRQNEITYDKIASARVSYGGRGQISDMQQPRYGQQIADI 242
Query: 235 LSP 237
+ P
Sbjct: 243 ILP 245
>gi|126738576|ref|ZP_01754281.1| flagellar L-ring protein precursor H [Roseobacter sp. SK209-2-6]
gi|126720375|gb|EBA17081.1| flagellar L-ring protein precursor H [Roseobacter sp. SK209-2-6]
Length = 246
Score = 218 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 124/243 (51%), Gaps = 6/243 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M L + G + + + P +P + + + S +
Sbjct: 3 MKTLFTTGLIAGLFVLGACNRMDHLGKPPSFTPANETQEHVAMLWQGLPHQVQSQRPVDN 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW S +L D RA+N GDILTV I ID++A N T RSR++S + L
Sbjct: 63 ASLWSGSQQSLLGDRRAMNKGDILTVVIEIDEEAEISNDTSRSRSSSESLNMPQLLGLPQ 122
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ G S G GS+ R+EKL L +AA V IL NG L ISGSQE
Sbjct: 123 RLDEHLPTGASAATAVDLGGASTSRGNGSVKRSEKLELKVAATVVDILPNGVLAISGSQE 182
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN E+R L V+G VRPQD+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+++
Sbjct: 183 LRVNFELRELLVSGYVRPQDISRKNEITYDKIASARVSYGGRGQITDVQQPRYGQQVLDA 242
Query: 235 LSP 237
+ P
Sbjct: 243 ILP 245
>gi|258404729|ref|YP_003197471.1| flagellar L-ring protein [Desulfohalobium retbaense DSM 5692]
gi|257796956|gb|ACV67893.1| flagellar L-ring protein [Desulfohalobium retbaense DSM 5692]
Length = 229
Score = 218 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
MY+Y IV C +L GC PQ P +
Sbjct: 1 MYKYI-IVFCVFALACGCAPKHE-----PQWGPEAN---------APQKVVPQKPQRASQ 45
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW A LF D++A GDI+TV I QA D T R +S+ ++ F +
Sbjct: 46 GSLWNTGEANLFSDNKAQAPGDIVTVSISEQAQASKDATTDTGRTSSVDAGINNLFGIPN 105
Query: 121 QQTPQMNGNLN------YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
Q N N++ + + G G SR L+ IA V L NGNL I G +
Sbjct: 106 SQALLSNPNVDLKNLVGANFNNSFVGSGETSRNANLSATIATQVIEQLPNGNLRIFGRKR 165
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
V VN+E + ++GIVRP+D+ A N V + +A I+Y G+G ++ +P +LI+N
Sbjct: 166 VMVNNEEEFIGLSGIVRPEDISAQNVVDSSYVLDAEITYTGRGAISDKQKPGWLMRLIDN 225
Query: 235 LSP 237
+ P
Sbjct: 226 VWP 228
>gi|58039744|ref|YP_191708.1| flagellar basal body L-ring protein [Gluconobacter oxydans 621H]
gi|81351941|sp|Q5FRE4|FLGH_GLUOX RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|58002158|gb|AAW61052.1| Flagellar L-ring protein flgH [Gluconobacter oxydans 621H]
Length = 248
Score = 218 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Query: 14 LLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
+L C+S +SEI P+M+ + N+ P ++ SLWR A
Sbjct: 20 VLSACNSLAQMSEIGRPPRMTSITDPTLANSYRPVTMPMPPLQAPPDEAASLWRSGSKAF 79
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
FKD RA VGD++T+ + I D A F+N T R + F + G+ + G +
Sbjct: 80 FKDQRASQVGDLVTIIVDITDNAAFNNGTTADRTADEKFGIPNLFGIKGKVISAITGADS 139
Query: 132 YDGGGASS--GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+S G I+R E + L +A +T +L NGN ++ G QEVRVN E+R L V+GI
Sbjct: 140 LSTASSSDSGATGKITRNETVTLRLAGTITQVLPNGNFVVMGKQEVRVNSELRELGVSGI 199
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VRPQD+ A N+V++D++AEARISYGG+G T+L P G Q+++ + P
Sbjct: 200 VRPQDITADNTVTHDRMAEARISYGGRGTLTQLQTPRYGQQVMDAILP 247
>gi|218778844|ref|YP_002430162.1| flagellar L-ring protein [Desulfatibacillum alkenivorans AK-01]
gi|218760228|gb|ACL02694.1| Flagellar biosynthesis, basal-body outer-membrane L
(lipopolysaccharide layer) ring protein
[Desulfatibacillum alkenivorans AK-01]
Length = 242
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 2 YRYSFIVLCYSSLLF-GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R I+L L GC + + P S+ M +
Sbjct: 3 MRLGIIILAIVLALSMGCATQRQDTLANPA----PSAATAPQHMLEQPATVTYNAPRPAE 58
Query: 61 YSLW-RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SLW + F D RA VGD++T+ I A +T +R++S+ ++
Sbjct: 59 GSLWVDPGGSQFFGDRRARQVGDLVTIRITETPTASLTAKTTTTRDSSVSADVTDLAGYM 118
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + + L+ + +G+G+ R+ + ++ V ++ NGNL ISGS+
Sbjct: 119 TWLEAANKNLKGDSLLSAGYKPSFTGQGTNDRSGSVTAYVSGRVVGVMANGNLQISGSRA 178
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
++VN+E + + ++GIVRP+D+D N V IA+ARI Y GKG + P G +++++
Sbjct: 179 IKVNNETQYMTISGIVRPEDIDPSNVVQSTYIADARIEYYGKGVIADKQIPGWGTRVLDH 238
Query: 235 LSP 237
+ P
Sbjct: 239 VWP 241
>gi|90422614|ref|YP_530984.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
BisB18]
gi|90104628|gb|ABD86665.1| flagellar L-ring protein [Rhodopseudomonas palustris BisB18]
Length = 234
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 140/237 (59%), Gaps = 6/237 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ R + + L GC ++++E+ P MSP+G L + R S +
Sbjct: 3 LMRLP-VAVTACLALAGCANNLAELGQAPAMSPIGQGLYADARAI---PVEPRSRYAQNR 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YSLW + L++D RA VGD+LTV I ++D+A DN+T RSR++ K + + F
Sbjct: 59 YSLWNE-RRDLYRDPRASRVGDLLTVTISMNDKATLDNKTDRSRDSETKFK-TNYLAEFL 116
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + N D ++ G G I R E++ +AA V +L NGNL+I+GSQEVRVN E
Sbjct: 117 PWSSKGKLEANVDSQTSTKGTGKIDRTEEVKFSVAAAVVDVLPNGNLLIAGSQEVRVNYE 176
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L+V GIVRP D+ +N+++Y+K+AEARISYGG+GR E+ +P GHQ+ + + P
Sbjct: 177 MRVLHVGGIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAWGHQVYDQVVP 233
>gi|144897834|emb|CAM74698.1| Flagellar L-ring protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 251
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 13/250 (5%)
Query: 1 MYRYSFI----VLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M + + L C+ S +SE+ P +S + P + +
Sbjct: 1 MISRILLRTTVIALAVGSLSACNALSRLSEVGSGPTVSKIEDPTQRAGYQPVVMPMPQPV 60
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRI-DDQAVFDNQTGRSRNNSLHRKLS 113
+ + SLWR A FKD RA +GDILTV + I ++ A F+++ RSR + ++
Sbjct: 61 APPQNANSLWRPGSRAFFKDQRAKEIGDILTVAVAITNETASFESKLTRSREAEENAGIT 120
Query: 114 GGFSLFGQQTPQMNGNLNYDG------GGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
G + +N ++ G R E L + +AAI+T +L NGNL
Sbjct: 121 GLLGFENSLNKILPDAVNPATLVGSTGTSTNTNSGKTERNESLTVSLAAIITQVLPNGNL 180
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+I+G QE+RVN E+R LNV GI+RP+D+ + NSV+YDKIAEARI YGG+G ++L +P
Sbjct: 181 VIAGKQEIRVNYEMRELNVQGIIRPEDISSANSVTYDKIAEARIYYGGRGVNSDLTQPRY 240
Query: 228 GHQLIENLSP 237
G QL++ + P
Sbjct: 241 GQQLLDVILP 250
>gi|254502121|ref|ZP_05114272.1| flagellar L-ring protein FlgH [Labrenzia alexandrii DFL-11]
gi|222438192|gb|EEE44871.1| flagellar L-ring protein FlgH [Labrenzia alexandrii DFL-11]
Length = 231
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+V + LL GC + +I P+M+P+G L N + + K SLWR
Sbjct: 1 MLVSLGAVLLSGCAGQLEDIGRAPEMTPVGYGL-ANRPATVYPLGTFSKGGIKDYNSLWR 59
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ F D RA +GD+LTV I+IDD+A DN + R R+ + S +
Sbjct: 60 NDRENFFADPRAKKIGDVLTVVIQIDDRAELDNTSERGRSADIGIGGSYSAGSNNSTSGG 119
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
LN + G +S+G GSI R+E++ L +AAIV L NGN++ISGSQEVRVN E+R LN
Sbjct: 120 -EAELNGNSGSSSAGSGSIDRSEEIELSVAAIVIDRLPNGNMVISGSQEVRVNYEMRILN 178
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V GIVRP+D++++N++ YDKIAEARISYGG+GR +E+ +P G Q+ + ++P
Sbjct: 179 VGGIVRPRDIESNNTIPYDKIAEARISYGGRGRISEVQQPGWGQQIYDIVTP 230
>gi|99082798|ref|YP_614952.1| flagellar basal body L-ring protein [Ruegeria sp. TM1040]
gi|99039078|gb|ABF65690.1| Flagellar L-ring protein precursor [Ruegeria sp. TM1040]
Length = 245
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 10/245 (4%)
Query: 2 YRYSFIVLCYSSLLF---GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
+ V C L GC + + P +P + + + +
Sbjct: 1 MKPLLAVKCAVLGLSLVGGCA-RMDHLGKPPSFTPANETQEHVAMLYQGLPVSSQTPRAV 59
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SLW S +L D RA GDILTV I I+++A N T RSRN+S ++ L
Sbjct: 60 DNASLWSGSRGSLLGDRRATKKGDILTVVIEINEKASISNDTQRSRNSSESLQVPQLLGL 119
Query: 119 FGQQTPQMNGN------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ ++ ++ +S G GS+SR+EKL L +AA V +L NG L ISGS
Sbjct: 120 PQRLDERLPEGASSADLVDLGSTSSSGGSGSVSRSEKLELRVAATVVDVLPNGVLAISGS 179
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QE+RVN E+R L V+G VRP D+ N V+YDKIA AR+SYGG+G+ T++ +P G Q++
Sbjct: 180 QELRVNFELRELLVSGYVRPDDISRQNEVTYDKIASARVSYGGRGQITDVQQPRYGQQVL 239
Query: 233 ENLSP 237
+ + P
Sbjct: 240 DAVLP 244
>gi|222084869|ref|YP_002543398.1| flagellar L-ring protein [Agrobacterium radiobacter K84]
gi|221722317|gb|ACM25473.1| flagellar L-ring protein [Agrobacterium radiobacter K84]
Length = 238
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 121/240 (50%), Positives = 158/240 (65%), Gaps = 4/240 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M ++L GC S ++ E+ P MSP+GS L + + P + K
Sbjct: 1 MNMRLTATCAIVAVLAGCQSPQALKELGRAPAMSPIGSGL-QYAQTPQMSQYPKRPHQVA 59
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ YSLW DS AALFKD+RALNVGDILTV I+I+D+A +DN+T R+R N +
Sbjct: 60 QGYSLWNDSQAALFKDARALNVGDILTVTIQINDKANWDNETNRNRTNKSDMNWDISAKI 119
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
FG P N + ++ KG + R+E++NLL+AA+VT ILENGNL+ISGSQEVR+N
Sbjct: 120 FG-WKPATNADATSGSDTSTDSKGKMQRSEQINLLVAAVVTGILENGNLMISGSQEVRMN 178
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
EIR LNV GIVRPQDV A N++SYDKIAEARISYGG+GR TE+ +PP+G Q ++ LSPL
Sbjct: 179 QEIRILNVAGIVRPQDVTADNTISYDKIAEARISYGGRGRLTEIQQPPVGQQAVDLLSPL 238
>gi|170748103|ref|YP_001754363.1| flagellar L-ring protein [Methylobacterium radiotolerans JCM 2831]
gi|170654625|gb|ACB23680.1| flagellar L-ring protein [Methylobacterium radiotolerans JCM 2831]
Length = 232
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/237 (41%), Positives = 144/237 (60%), Gaps = 6/237 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + L C + + EI P +SP+G +D N+ + +
Sbjct: 1 MKR--LAAIAALTTLGACATPVQEIGRAPALSPVGLGIDPNHDA---VPPLAVASQAQGY 55
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+S W A LF+D RA NVGD+LTV I ++D+A FDN T RSR++ L F LFG
Sbjct: 56 HSTWAQQSADLFQDPRAKNVGDVLTVLIAMNDKAQFDNATDRSRDSRAKTSLDLQFDLFG 115
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
TP+ + +G ++ G+G+I R E+L L +AA+VT + NGN++ISGSQEVRVN E
Sbjct: 116 -LTPESKNHYEVNGNSSTKGQGTIDRKEQLRLSVAAVVTHVFPNGNMLISGSQEVRVNFE 174
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R LN+ GIVRP+D+ N++ YDKIAEAR+SYGG+GR E+ +P + Q+ + +SP
Sbjct: 175 VRVLNIAGIVRPRDISRRNTIDYDKIAEARVSYGGRGRLMEVQQPAVAQQVYDLVSP 231
>gi|326404067|ref|YP_004284149.1| flagellar L-ring protein [Acidiphilium multivorum AIU301]
gi|325050929|dbj|BAJ81267.1| flagellar L-ring protein [Acidiphilium multivorum AIU301]
Length = 253
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 8/242 (3%)
Query: 4 YSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ SLL GC + +++ + P M+P+ + + P + +
Sbjct: 11 FRLAAFGLVSLLEGCGTFSNLAYVGHAPPMTPITNPTKAPSWRPVSMPMPPLRRAPTEPD 70
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG- 120
SLWR A FKD RA VGDI+T+ I I+D A +QT R S + F L
Sbjct: 71 SLWRRGARAFFKDQRASQVGDIITILININDAATLKDQTTLGRTGSESLGVPNLFGLESL 130
Query: 121 -----QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
++ + ++ G S+G G I R E ++L +A +T +L +GN ++ QE+
Sbjct: 131 IPRVLGKSVNPSSLVSLSSAGNSTGTGQIQRNESVSLSLAGEITQVLPDGNFVVVARQEM 190
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
RVN E+R L V+GI RPQD+ +N++ +++AEARISYGG+G + P G Q+++++
Sbjct: 191 RVNHELRVLTVSGICRPQDISGNNTIQSNQLAEARISYGGRGIVSGEQSPRYGQQVLDDI 250
Query: 236 SP 237
P
Sbjct: 251 VP 252
>gi|77918758|ref|YP_356573.1| flagellar biosynthesis, basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Pelobacter
carbinolicus DSM 2380]
gi|77544841|gb|ABA88403.1| flagellar biosynthesis, basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Pelobacter
carbinolicus DSM 2380]
Length = 231
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 1 MYR--YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R ++ VL +L GC + + P +P+ + +
Sbjct: 1 MKRSMRTWAVLPILLMLVGCVTQ-RIVEPQPHSAPI-------------AARQVQPEQPQ 46
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW + +LF+D++A VGDI+TV I A T R++S+ L+ F +
Sbjct: 47 APGSLWTEGRGSLFRDNKARRVGDIVTVAIYEQASASKQASTATGRSSSMSAGLTNLFGI 106
Query: 119 FGQQTP-----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
G ++ A G GS SR E L + A V L NGNL I+G +
Sbjct: 107 EGNIGNLNKFIDPTSLIDTSYENAFDGSGSTSRKEDLVATLTAQVIEELPNGNLCIAGGK 166
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
V VN E + + + GI+RP+D+ A N VS I +A+I+Y GKG ++ RP ++++
Sbjct: 167 TVTVNREDQIILLEGIIRPEDISARNVVSSKHILDAKIAYTGKGVISDKQRPGWMTRVLD 226
Query: 234 NLSP 237
++ P
Sbjct: 227 HIWP 230
>gi|206889518|ref|YP_002249846.1| flagellar L-ring protein FlgH [Thermodesulfovibrio yellowstonii DSM
11347]
gi|254789285|sp|B5YIX2|FLGH_THEYD RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|206741456|gb|ACI20513.1| flagellar L-ring protein FlgH [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 238
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 28/251 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + I LC L C S + E+ I +N MP
Sbjct: 1 MRKLILISLCI-FFLASC-SELQEVRDI-----------KNAGMPPKYYPEPPQTQVASE 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-- 118
SLWR + A+L++D +A V D++T+ I A T SR++S + L F +
Sbjct: 48 GSLWR-NKASLYEDKKARRVNDLVTILINESTSAQKTASTTASRDSSTNYGLDTFFGMNT 106
Query: 119 ------------FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
F + + ++ G G +R K+ I A V +L NGN
Sbjct: 107 DFNIHNLPLINGFYKAGNVFSPSVKGSATSDFKGDGDTARTGKITGTITAKVVEVLPNGN 166
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
L+I +EV VN+E L + GI+RP D+ N++ +A+A+I G+G +
Sbjct: 167 LVIESRKEVIVNNEKEILVLRGIIRPDDISQSNTILSQYVADAQIYLVGEGTLGDKQSQG 226
Query: 227 IGHQLIENLSP 237
+ ++ + P
Sbjct: 227 WLVRFLDKIWP 237
>gi|192359552|ref|YP_001982397.1| flagellar L-ring protein FlgH [Cellvibrio japonicus Ueda107]
gi|190685717|gb|ACE83395.1| flagellar L-ring protein FlgH [Cellvibrio japonicus Ueda107]
Length = 229
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 18/240 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ +++ SLL GC + I P +P +S S +
Sbjct: 6 MCKW-LLMVSAVSLLIGCGGNRKPIADDPAYAPTIAS--------------NMSVPQRTE 50
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL++D + +LF D +A VGD++TV + + + + + ++
Sbjct: 51 GSLYQDVYGVSLFNDRKAHFVGDVITVTLSERTVSRKSSGVTTGKKSGVNFNAGPLLG-A 109
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G ++ L I V IL NGNLI+ G + + +N
Sbjct: 110 NPTIKDRELTTTLTQDRTFDGSADADQSNSLQGNITVTVAEILPNGNLIVRGEKWITLNR 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ ++GIVRP+D+ N++ ++A A+ISY G G + + + L PL
Sbjct: 170 GDEFIRISGIVRPEDIAPDNTIVSTRLANAKISYSGTGELANAQKMGWLSRFFNSDLWPL 229
>gi|163738058|ref|ZP_02145474.1| flagellar L-ring protein [Phaeobacter gallaeciensis BS107]
gi|161388674|gb|EDQ13027.1| flagellar L-ring protein [Phaeobacter gallaeciensis BS107]
Length = 246
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 1 MYRYSFIV---LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + + L L C + + P SP S + + +
Sbjct: 1 MKNKTLLANTALAAMVALSAC-GRLDHVGKPPTFSPANESPEHVAMLFQGLPVNTQNQRP 59
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW S +L D RA GDILTV I ID++A N T RSR+ S +
Sbjct: 60 VDQASLWSGSRQSLLGDRRATKQGDILTVVIEIDEEAEISNDTKRSRSGSESLAVPQLLG 119
Query: 118 LFGQQTPQMNGNLNYDGG------GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
L + ++ + +S GKGS+ R+EKL L +AA V +L NG L ISG
Sbjct: 120 LPQRLDRKLPEGASMADAVDIGSSSSSGGKGSVKRSEKLELRVAATVVDVLPNGVLSISG 179
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+QE+RVN E+R L VTG VRP D+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+
Sbjct: 180 TQELRVNFEMRELLVTGYVRPDDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQV 239
Query: 232 IENLSP 237
++ + P
Sbjct: 240 LDVILP 245
>gi|56460249|ref|YP_155530.1| flagellar basal body L-ring protein [Idiomarina loihiensis L2TR]
gi|81363527|sp|Q5R0P9|FLGH_IDILO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|56179259|gb|AAV81981.1| Flagellar basal body L-ring protein [Idiomarina loihiensis L2TR]
Length = 224
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 18/237 (7%)
Query: 4 YSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
S + + +L GC + + P +P+ +P + S
Sbjct: 2 RSLLFSLTALVLAGCVQTPHKPMPDDPYYAPVLPEERAQPVVP--------------TGS 47
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
L++D++A L+ D +A +GDI+TV +R A T S+ ++ F
Sbjct: 48 LFQDAYADNLYSDIKARRLGDIITVTLREQTTASKTATTETSKESTAELAAPTAFGRNIT 107
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ +G SG GS ++ +LN I V +L NGNLI+ G + +R+N
Sbjct: 108 VGGN-PLSAGINGTREFSGDGSSDQSNQLNGEITVTVIKVLPNGNLIVRGEKWMRINTGD 166
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ +TG++RPQD+ A N + ++A ARI Y G G ++ + + + P
Sbjct: 167 EYIRLTGMIRPQDITAANQIPSTRVANARIEYSGTGSLAQVQEQGWLTRFFNSPIWP 223
>gi|218887606|ref|YP_002436927.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|226701917|sp|B8DQY1|FLGH_DESVM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|218758560|gb|ACL09459.1| flagellar L-ring protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 238
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 26/250 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R C LL GC+++ + SP+ + D+
Sbjct: 1 MKRRLLAAGCAMLLLSGCNAARQQP------SPVPPVTQPQAYA-------EPEDTAANP 47
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ +S LF D+RA VGDI+ V + D+A T + ++ +S F
Sbjct: 48 GSLYSESDSEFLFSDNRARRVGDIVLVKVVETDKAKNKADTTADKTSTNELGVSAFFGQS 107
Query: 120 GQQTPQMNGN------------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+N L S G R + IAA V +L G +
Sbjct: 108 SASINPINPAGPFSGAVGANPILGTSSTSKHSATGETKRESTVTTTIAARVLRVLPGGLM 167
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G++E RVNDE + + V+G+VR +DV + NSV+ ++A ARI Y GKG + +P
Sbjct: 168 EVEGARETRVNDETQYIVVSGLVRARDVSSDNSVTSSQMANARIEYYGKGTLADKQKPGW 227
Query: 228 GHQLIENLSP 237
+L++N+ P
Sbjct: 228 FTRLMDNVWP 237
>gi|88911315|sp|Q748F4|FLGH_GEOSL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|298507076|gb|ADI85799.1| flagellar L-ring lipoprotein FlgH [Geobacter sulfurreducens KN400]
Length = 226
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + ++C + L GC +E+ R P + + + +
Sbjct: 1 MKRLAMSIICLA--LAGCAVEKTEV-----------------RTPTFDEQLRPAPPSYAN 41
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+W+ S L D +A + GDI+TV I A + T R + + L
Sbjct: 42 GSIWQASTTGLAVDHKARSRGDIITVLIVEQASASKEATTDTERKAEVSASVPYLMGLEK 101
Query: 121 Q-------QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
N L G G+ +R E L + A +T +L NGN +I G +
Sbjct: 102 SSTLFSKLTNANPNNLLGASTNSKYEGSGATTRKENLLATMTAKITDVLPNGNFLIEGRR 161
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
V+VN+E + L + G +RP+DV N++S IA+ARISY G G ++ RP +++
Sbjct: 162 NVKVNNEDQILVLQGTIRPRDVSPDNTISSTMIADARISYTGNGVISDRQRPGWLMNILD 221
Query: 234 NLSP 237
+ P
Sbjct: 222 YIWP 225
>gi|182680544|ref|YP_001834690.1| flagellar L-ring protein [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636427|gb|ACB97201.1| flagellar L-ring protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 344
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 4/237 (1%)
Query: 3 RYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R+SF + S L GC I E+ P MS +G+ L + + S + +
Sbjct: 111 RFSFAFVALGSVALAGCAGDIRELGREPAMSALGTGLAARVQPSATAVFQNASMTRPQ-- 168
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
S+W S +F D RA +GD++TV I I+D A F N T RS ++ L Q
Sbjct: 169 SIWNGSRTDIFSDPRAARIGDVVTVMIFINDHATFGNNTDRSLEAKINTGFDYKLGLSNQ 228
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
Q + D ++ G+G+I R+EK+ L +AA+VT +L NGNLIISGSQEVRVN E+
Sbjct: 229 TI-QFKPTITSDILSSTQGQGAIDRSEKMQLSVAAVVTDVLPNGNLIISGSQEVRVNFEL 287
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
R LNV GIVRPQD+ N+VSYDKIAEARISYGG+GR E+ +P IG Q+ + P+
Sbjct: 288 RLLNVAGIVRPQDIAKDNTVSYDKIAEARISYGGRGRIMEVQQPAIGQQIYDRFKPI 344
>gi|254785375|ref|YP_003072804.1| flagellar L-ring protein FlgH [Teredinibacter turnerae T7901]
gi|237685159|gb|ACR12423.1| flagellar L-ring protein FlgH [Teredinibacter turnerae T7901]
Length = 234
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 20/240 (8%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R L LL GC + P +P+ + K + ++ S
Sbjct: 9 RLCATALFGGWLLAGCVGQ-PPLPDDPYYAPV--------------MQPKPAPDMPQNGS 53
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL--- 118
L+ +S A +LF D +A VGDI+ V ++ + + +NN + S G +
Sbjct: 54 LFAESTAMSLFNDRKATRVGDIINVVLQERTTSSKSSNMDLKKNNDVSVGGSAGDPVVFG 113
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + G+ ++ +L I+ V + NG L++ G + + +N
Sbjct: 114 TVPGLGNLGLTADLSSAKEFKGEAGADQSNQLTGNISVTVVDVYPNGTLLVRGEKWITLN 173
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ ++G+VRP DV+ N+V K+A ARI+Y G G + + + N + P
Sbjct: 174 QGNEYIRLSGLVRPDDVEPDNTVVSTKLANARITYSGTGEFADSQQMGWLTRFFHNPVWP 233
>gi|170741840|ref|YP_001770495.1| flagellar L-ring protein [Methylobacterium sp. 4-46]
gi|168196114|gb|ACA18061.1| flagellar L-ring protein [Methylobacterium sp. 4-46]
Length = 232
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 130/237 (54%), Gaps = 6/237 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L C + I P ++P+G+ L + +
Sbjct: 1 MKRLLTC--AAVAGLGACAQPLDPIGRPPLLTPIGTGLAAPRE---PLPASFAATPRRSY 55
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S W A LF+D RA N+GD++TV I I+D+A FDN T RSR+ + + G
Sbjct: 56 SSTWAPGAADLFQDPRARNIGDVITVSISINDKAQFDNATDRSRSQKSSLGFDFSYGVSG 115
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G + G G+I R E L+L +AA+VT L NGNL+ISGSQEVRVN E
Sbjct: 116 VKD-SATADAGIRSGTETKGNGTIDRKENLSLSVAAVVTDTLPNGNLLISGSQEVRVNSE 174
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L V GIVRP+D+ N++ YDKIAEARISYGG+GR T++ P IG ++ E ++P
Sbjct: 175 VRVLTVAGIVRPRDITRKNTIDYDKIAEARISYGGRGRITDVQDPTIGQRVFETVTP 231
>gi|68164543|gb|AAY87272.1| predicted flagellar basal body L-ring protein [uncultured bacterium
BAC17H8]
Length = 229
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 1 MYRYS--FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R ++LC + + GC + + +P P +
Sbjct: 1 MRRLFAAILLLCAAGIASGCSTYVENEASLP-------------FEPIYPSAHVTPEGEA 47
Query: 59 KSYSLWRDSHAALF-KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS-GGF 116
+ +++ + LF D RA +VGDILTV + A ++N++ L G
Sbjct: 48 PTGGIFKSNGGGLFASDIRARDVGDILTVALNETFAATKAQTAASAKNDAFGVTLPTGLP 107
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+LF + LN + +G GS +++ L L+ VT + +NGN+ I+G +++
Sbjct: 108 NLFTGGYDKNAAGLNAGTARSFAGSGSAAQSNSLTGLLTVTVTRVFDNGNMEIAGQKKLT 167
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N+ + +TG++RP+D+ A N+V ++IA+A I Y G G + R + + N+S
Sbjct: 168 LNNGDEYVRLTGLIRPEDISATNTVQSNRIADAEIVYVGAGEIADSSRQGWLSRTLRNVS 227
Query: 237 PL 238
PL
Sbjct: 228 PL 229
>gi|83594177|ref|YP_427929.1| flagellar basal body L-ring protein [Rhodospirillum rubrum ATCC
11170]
gi|110816540|sp|Q2RQF3|FLGH_RHORT RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|83577091|gb|ABC23642.1| Flagellar L-ring protein [Rhodospirillum rubrum ATCC 11170]
Length = 255
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 18 CHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
C++ +SEI P MS + + + P + SLW + FKD
Sbjct: 26 CNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPMPAPMVAEPNPSSLWVPGARSFFKDQ 85
Query: 76 RALNVGDILTVDIRI-DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN--- 131
RA VGD+LTV + I +++A F N R+R N L+ G + ++
Sbjct: 86 RAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEGANLTSFLGFEGTLADVLPDGVDPAS 145
Query: 132 ---YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+ +G GS++R+E +++ +AA+V IL NGN +I+G QEVRVN E+R L VTG
Sbjct: 146 LTSFGSDSKHTGNGSMARSETVSMRLAAVVLQILPNGNFVIAGKQEVRVNGELRELTVTG 205
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
++RP+D+ + N++ + +IAEARISYGG+G T+++ P G Q+ + L P
Sbjct: 206 VIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMVEPRYGQQVYDILFP 254
>gi|89069816|ref|ZP_01157151.1| flagellar L-ring protein precursor [Oceanicola granulosus HTCC2516]
gi|89044617|gb|EAR50733.1| flagellar L-ring protein precursor [Oceanicola granulosus HTCC2516]
Length = 242
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK--- 58
R + LL C + + P +SP + + M +
Sbjct: 1 MRPILLSF---LLLAAC-GRLDHLGRPPPISPPRAGDEHIAMMTDALPLVDPVPAVAEPL 56
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SLW +L D RA+ GDILTV I IDD+A N T RSR+ S + +
Sbjct: 57 AAASLWTGERGSLLGDRRAVQRGDILTVVIEIDDRAEIQNSTSRSRSGSESLGIPQLLGI 116
Query: 119 FGQQTPQMN------GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ P + ++ S G GS+SR E+L L +AA + +L NG L ISGS
Sbjct: 117 PQRVDPALPEGASLADAVSLTSNSFSDGDGSVSRNERLELRVAATILDVLPNGVLAISGS 176
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QEVRVN E+R L V+G VRP+D+ N ++YDKIA ARISYGG+G +++ +P G QL
Sbjct: 177 QEVRVNHELRELLVSGFVRPEDITRQNEITYDKIASARISYGGRGLISDVQQPRYGQQLA 236
Query: 233 ENLSP 237
+ L P
Sbjct: 237 DILLP 241
>gi|110816534|sp|Q3A5F4|FLGH_PELCD RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 227
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 19/239 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
++ VL +L GC + + P +P+ + + SL
Sbjct: 2 RTWAVLPILLMLVGCVTQ-RIVEPQPHSAPI-------------AARQVQPEQPQAPGSL 47
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
W + +LF+D++A VGDI+TV I A T R++S+ L+ F + G
Sbjct: 48 WTEGRGSLFRDNKARRVGDIVTVAIYEQASASKQASTATGRSSSMSAGLTNLFGIEGNIG 107
Query: 124 P-----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ A G GS SR E L + A V L NGNL I+G + V VN
Sbjct: 108 NLNKFIDPTSLIDTSYENAFDGSGSTSRKEDLVATLTAQVIEELPNGNLCIAGGKTVTVN 167
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E + + + GI+RP+D+ A N VS I +A+I+Y GKG ++ RP ++++++ P
Sbjct: 168 REDQIILLEGIIRPEDISARNVVSSKHILDAKIAYTGKGVISDKQRPGWMTRVLDHIWP 226
>gi|119503647|ref|ZP_01625730.1| Flagellar basal body L-ring protein [marine gamma proteobacterium
HTCC2080]
gi|119460709|gb|EAW41801.1| Flagellar basal body L-ring protein [marine gamma proteobacterium
HTCC2080]
Length = 228
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L GC +++ P ID+ ++
Sbjct: 1 MIRILLSTVALGITLVGCGGVETKV--------------HPAYAPIEPIDYADNREGTTP 46
Query: 61 YSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ +LF+D+RA ++GDI++V ++ A T S+ + + F
Sbjct: 47 ASLYNKRGGLSLFEDTRARSIGDIVSVVLQESTSAAKSADTDLSKGSDIGVDAPVLFGEP 106
Query: 120 GQQTPQMNGNLNYDGGGAS--SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ +L+ G+GS +++ +L IA V +L NGNL++ G + +++
Sbjct: 107 FNFGGGDSYDLSQSIASEYGFQGQGSSNQSNRLQGAIAVQVAKVLPNGNLVVQGEKWIKL 166
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + + GI+RP+D+ N++ +A+ARISYGG G E P + SP
Sbjct: 167 NQGDEFIQLRGIIRPEDISPLNTIPSSLVADARISYGGTGIIEEANTPGWLTRFFT--SP 224
Query: 238 L 238
L
Sbjct: 225 L 225
>gi|154253001|ref|YP_001413825.1| flagellar L-ring protein [Parvibaculum lavamentivorans DS-1]
gi|154156951|gb|ABS64168.1| flagellar L-ring protein [Parvibaculum lavamentivorans DS-1]
Length = 244
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 87/223 (39%), Positives = 124/223 (55%), Gaps = 11/223 (4%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNV 80
+S I P +P+ S + + SLWR A F+D RA V
Sbjct: 26 RVSNIGKAPDFAPISSPATT-----IAMPMPEPEQIVYQPNSLWRSGSRAFFRDQRAARV 80
Query: 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG------ 134
GDILTV I I D A DN T RSR N+ +L F ++ D
Sbjct: 81 GDILTVLIGIADSAKVDNSTKRSRANAEDAELGNLFGYENYLGKVFPDGVDNDNLARLGS 140
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
+S+G GS+ R EK++L +AA+VT +L NGNL+I+G Q+VRVN E+R L VTGIVRP+D
Sbjct: 141 SSSSAGAGSVDRKEKIDLTVAAVVTQVLPNGNLVIAGRQQVRVNYEVRDLEVTGIVRPED 200
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ N+V++ +IAEARI+YGG+G+ +++ +P G QL + + P
Sbjct: 201 ISNTNTVAHTQIAEARIAYGGQGQISDVQQPRYGQQLFDIIMP 243
>gi|315127350|ref|YP_004069353.1| flagellar basal body L-ring protein [Pseudoalteromonas sp. SM9913]
gi|315015864|gb|ADT69202.1| flagellar basal body L-ring protein [Pseudoalteromonas sp. SM9913]
Length = 227
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISE--ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R + + LL GC S+ + + P +PM N +
Sbjct: 1 MRNIMLFAVGTLLLSGCVSTQNNEVVQDDPYYAPMYPE--------------PNMEPVVA 46
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ L+ D +AL GDI+TV ++ QA +T + G
Sbjct: 47 TGSLFSTQLSNDLYADKKALRTGDIITVKLQESTQATKAAKTETDKQTDASLDPVIGLGG 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + G +++ L I+ V +L NGNL+I G + + +N
Sbjct: 107 LPVNIGGDSIQFGVGSDASFKGDSKSNQSNSLVGDISVNVMRVLPNGNLVIRGEKWLTLN 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ + G+VRPQDV+A N+V ++IA ARI Y GKG+T E P + +L P
Sbjct: 167 TGEEFIRLEGLVRPQDVNADNTVESNRIANARIQYSGKGQTQEAQSPGWLTRFFSSSLFP 226
>gi|332533172|ref|ZP_08409041.1| flagellar L-ring protein FlgH [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037454|gb|EGI73908.1| flagellar L-ring protein FlgH [Pseudoalteromonas haloplanktis
ANT/505]
Length = 227
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSI--SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R + + L GC S+ + P +PM +
Sbjct: 1 MRNIILFAAGTLFLSGCMSTQNSEVVQDDPYYAPMYPE--------------PILEPLVA 46
Query: 60 SYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ + L+ D +AL GDI+TV ++ QA +T + G
Sbjct: 47 TGSLFNTHTSNDLYSDKKALRTGDIITVKLQESTQATKAAKTETDKETDASLDPVIGLGG 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + +G +++ L I+ V +L NGNL+I G + + +N
Sbjct: 107 LPVNIGGDSIQFGIGSDSSFTGDSKSNQSNSLVGDISVNVMRVLPNGNLVIRGEKWLTLN 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ + G+VRPQDV A N+V ++IA ARI Y GKG+T E P + +L P
Sbjct: 167 TGEEFIRLEGLVRPQDVSADNTVESNRIANARIQYSGKGQTQEAQSPGWLTRFFSSSLFP 226
>gi|94500244|ref|ZP_01306777.1| Flagellar basal body L-ring protein [Oceanobacter sp. RED65]
gi|94427543|gb|EAT12520.1| Flagellar basal body L-ring protein [Oceanobacter sp. RED65]
Length = 223
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 22/239 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + ++L GC + + E P +P+ +
Sbjct: 1 MNNRFISLFAIMTILQGCSTIVPMDEKPDDPNFAPV--------------PAQSLKPPAE 46
Query: 59 KSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S+++ ++ AL+ D R+ +GDI+T+ ++ A N ++++ + + F
Sbjct: 47 NNGSIYQANYSMALYGDQRSRRIGDIVTIILQEQTNASKSNSASTTKDSEIDVVPTSIFG 106
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+++ A G G ++ L I ++ IL NG L I G + + +
Sbjct: 107 QGLDFLQN-----DFEAERAFDGSGDADQSNSLQGQITVTISDILPNGVLEIRGEKWLSL 161
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
N + V G++RPQD+ + N+V K+A+ARISYGG G +P + +
Sbjct: 162 NQGDEFIRVKGLIRPQDISSDNTVLSHKLADARISYGGTGYVHNASKPGWLDRFFTSQW 220
>gi|328545501|ref|YP_004305610.1| flagellar L-ring protein H [polymorphum gilvum SL003B-26A1]
gi|326415243|gb|ADZ72306.1| Flagellar L-ring protein H [Polymorphum gilvum SL003B-26A1]
Length = 234
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 133/220 (60%), Gaps = 2/220 (0%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRA 77
C ++E+ P MSP+G L F F S + K+ SLW F D RA
Sbjct: 16 CAGQLNEVGREPTMSPVGYGLMAQPGAMFPLNTFSPS-ARKEYNSLWVSGREDFFSDPRA 74
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
+GD+LTV I I+D+A DN + R RN+S+ G T + +
Sbjct: 75 RRIGDVLTVRIAINDKATLDNTSNRRRNSSIGFGGEASAGWDGSSTGGDAAL-DASSASS 133
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
S+GKGSI R E++ L +AA+VT L NGNL+ISGSQEVRVN E+R L+VTGIVRP+D+
Sbjct: 134 STGKGSIDRKEEIALSVAAVVTDRLPNGNLVISGSQEVRVNYEMRVLHVTGIVRPRDIGG 193
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N+++YDKIAEARISYGG+GR +E+ +P G Q+++ ++P
Sbjct: 194 DNTIAYDKIAEARISYGGRGRISEIQQPGWGQQVLDIVTP 233
>gi|115523183|ref|YP_780094.1| flagellar basal body L-ring protein [Rhodopseudomonas palustris
BisA53]
gi|115517130|gb|ABJ05114.1| flagellar L-ring protein [Rhodopseudomonas palustris BisA53]
Length = 234
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 135/238 (56%), Gaps = 6/238 (2%)
Query: 1 MYRYSF-IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + L GC +++++ P MSP+G L + R + T
Sbjct: 1 MRCLRLSVALAACLASAGCANNLADFNQAPLMSPIGQGLQADARAI---PIERRGRFTPG 57
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+SLW D L++D RA +GD+LTV I ++D+A DN+T RSR++ F
Sbjct: 58 RHSLW-DERKDLYRDPRASRIGDLLTVTISMNDKATLDNKTDRSRDSKTKFDFDYLA-EF 115
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + N + ++ G G I R E++ +AA+V +L NG+L+ISGSQEVRVN
Sbjct: 116 LPLSKKGKLDANVNSQSSTKGTGKIDRTEEVKFSVAAVVVDVLPNGSLLISGSQEVRVNY 175
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E+R L V GIVRP D+ +N+++Y+K+AEARISYGG+GR E+ +P GHQ+ + + P
Sbjct: 176 EMRVLTVGGIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAWGHQVYDQVVP 233
>gi|238919262|ref|YP_002932777.1| flagellar basal body L-ring protein [Edwardsiella ictaluri 93-146]
gi|238868831|gb|ACR68542.1| flagellar L-ring protein FlgH, putative [Edwardsiella ictaluri
93-146]
Length = 228
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 10/237 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S I L + L GC + P + + + S ++
Sbjct: 1 MQKHSGIALLCTLALSGCAYIPHDQV----------VTGPTTATPAPAVPPRPNGSIFQT 50
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ LF+D R NVGDILT+ ++ + A ++ SR+ S S
Sbjct: 51 VQPINYGYQPLFEDRRPRNVGDILTIVLQENVSASKNSSANASRDGSSKFDFSTVPRYLE 110
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
N+ DG SGKG I V + NGNL + G +++ +N
Sbjct: 111 GLFGNARANMEVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVVGEKQIAINQG 170
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + +NSVS ++A+ARI Y G G E + NLSP
Sbjct: 171 TEYIRFSGVVNPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSP 227
>gi|116250486|ref|YP_766324.1| flagellar basal body L-ring protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255134|emb|CAK06208.1| putative flagellar L-ring protein precursor (basal body L-ring
protein) [Rhizobium leguminosarum bv. viciae 3841]
Length = 238
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 125/224 (55%), Positives = 157/224 (70%), Gaps = 4/224 (1%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC +++SEI P MSP+GS L + P + + K + + YSLW DS AALFKD
Sbjct: 17 GCQSPTAVSEIGRAPAMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+RALNVGDILTVDI+I+D+A FDN+T RSR NS +FG TP+ +L Y
Sbjct: 76 ARALNVGDILTVDIQINDKASFDNETNRSRTNSSGMNWDVNAQIFG-WTPESKTDLTYGS 134
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 135 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 194
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
V+A N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 195 VNADNQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 238
>gi|163850067|ref|YP_001638110.1| flagellar L-ring protein [Methylobacterium extorquens PA1]
gi|240137201|ref|YP_002961670.1| flagellar L-ring protein FlgH [Methylobacterium extorquens AM1]
gi|254559213|ref|YP_003066308.1| flagellar L-ring protein FlgH [Methylobacterium extorquens DM4]
gi|163661672|gb|ABY29039.1| flagellar L-ring protein [Methylobacterium extorquens PA1]
gi|240007167|gb|ACS38393.1| flagellar L-ring protein FlgH [Methylobacterium extorquens AM1]
gi|254266491|emb|CAX22255.1| flagellar L-ring protein FlgH [Methylobacterium extorquens DM4]
Length = 235
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 139/237 (58%), Gaps = 3/237 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S V + L C S + + P ++P+G+ L+ L F
Sbjct: 1 MRPSSAAVAVLALSLGACQSDLDRLGRPPLLTPIGTGLNAP--REPLPTSFGALGPRHSY 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+S W + AAL++D RA +VGD++TV I I+D+A FDN + R R+ G+ + G
Sbjct: 59 HSTWSPASAALYQDPRARDVGDVITVSIAINDKAQFDNASERGRSQKSSLGFDFGYGISG 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G + G+GSI R E L+L +AA+VT +L NGN++ISGSQEVRVN+E
Sbjct: 119 LKD-TATADTGIRSGTETKGQGSIDRKESLSLSVAAVVTEVLPNGNVLISGSQEVRVNNE 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L V GIVRP+D+ N++ YDKIAEARISYGG+GR T++ P +G ++ E ++P
Sbjct: 178 VRVLEVAGIVRPRDISRKNTIDYDKIAEARISYGGRGRITDVQGPSLGQRVFETVAP 234
>gi|77464902|ref|YP_354406.1| flagellar basal body L-ring protein [Rhodobacter sphaeroides 2.4.1]
gi|126463744|ref|YP_001044858.1| flagellar basal body L-ring protein [Rhodobacter sphaeroides ATCC
17029]
gi|221640823|ref|YP_002527085.1| flagellar basal body L-ring protein [Rhodobacter sphaeroides KD131]
gi|332559800|ref|ZP_08414122.1| FlgH2 [Rhodobacter sphaeroides WS8N]
gi|77389320|gb|ABA80505.1| Flagellar L-ring protein [Rhodobacter sphaeroides 2.4.1]
gi|126105408|gb|ABN78086.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17029]
gi|221161604|gb|ACM02584.1| Flagellar L-ring protein precursor [Rhodobacter sphaeroides KD131]
gi|332277512|gb|EGJ22827.1| FlgH2 [Rhodobacter sphaeroides WS8N]
Length = 239
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
+ +SE+ P +P + + + + SLW A+L D RA
Sbjct: 14 CARLSEVGKAPSFTPADDTFQYHAMYALPLPEDVANSGPTAGSSLWAGDRASLLGDRRAS 73
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF------GQQTPQMNGNLNY 132
GDILTV I IDD+A N TGRSR+ L F L M ++
Sbjct: 74 RRGDILTVVIEIDDRAEISNSTGRSRSGGETLGLPSFFGLPQRIDRHLPDGASMADAVST 133
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
+G GS+ R EK+ L +AA V L NG L I G QEVRVN E+R L VTG VRP
Sbjct: 134 TSSSNYAGDGSVRRKEKMTLRVAATVVEELPNGVLRIQGQQEVRVNYELRELVVTGYVRP 193
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
D+ N ++YDKIAEARISYGG+G+ T++ +P G Q+ + + P
Sbjct: 194 GDISRQNEITYDKIAEARISYGGRGQITDVQQPRYGQQVADIILP 238
>gi|46398395|gb|AAS91883.1| flagelle L-ring protein [Legionella pneumophila]
Length = 230
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R++ C + LLFGC + + D + P + + K
Sbjct: 1 MNRFNIATTCLATVLLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKV 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ RA + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPRARHPGDILTVYLIEKTDAQKNATTTQRKNDTEKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+++ G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|90021852|ref|YP_527679.1| Hpt sensor hybrid histidine kinase [Saccharophagus degradans 2-40]
gi|89951452|gb|ABD81467.1| Hpt sensor hybrid histidine kinase [Saccharophagus degradans 2-40]
Length = 230
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 17/236 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ I + S GC G P +P+ S+ + + SL
Sbjct: 9 KALIAVNCSLFFSGCVVHQPVAPGDPYYAPVLSTSSQ--------------AQPPANGSL 54
Query: 64 WRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ + + LF D +AL VGDI+TV ++ + + G ++N + + S F
Sbjct: 55 YSPNSSIDLFSDRKALRVGDIITVVLQERTSSKKSSNIGVKKDNDISQGSSTVFGTTPGL 114
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
G + G G+ ++ +L I V + NG L I G + + +N
Sbjct: 115 GNLGLGL-DVQGEREFKGEADSDQSNQLTGSITVTVVEVYPNGTLSIRGEKWMTLNRGDE 173
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ V+G+VRP DV N+V KIA A ISY G+G + + Q + P
Sbjct: 174 FIRVSGLVRPDDVGPDNTVVSTKIANAHISYSGEGEFADSQKMGWLTQFFNGPIWP 229
>gi|89056682|ref|YP_512133.1| flagellar basal body L-ring protein [Jannaschia sp. CCS1]
gi|123400875|sp|Q28JK4|FLGH_JANSC RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|88866231|gb|ABD57108.1| flagellar L-ring protein FlgH [Jannaschia sp. CCS1]
Length = 244
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 127/243 (52%), Gaps = 6/243 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M FI L +++ ++ + P ++ + D ++ S +
Sbjct: 1 MNMRVFIFLIFAAASVSACGRLASVGQTPNLTSPADGNEVFAMNVVPIPDARDVPSRTEG 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW A+L D RA GDILTV I IDD A F N + R R+ S +S F L
Sbjct: 61 ASLWTSGRASLLGDRRASLRGDILTVVIEIDDSAEFSNSSERERSGSEQMGISNLFGLPQ 120
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
Q + + D SSG+G+I R E+L L +AA +T +L+NG L I GSQE
Sbjct: 121 RVDGLLTQGGSLGEAVELDSASRSSGEGAIRRNEQLTLRVAATITEVLQNGVLRIEGSQE 180
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VRVN+E+R L VTG VRP+D+ N++ YD+IA ARISYGG+G T+ RP G ++ +
Sbjct: 181 VRVNNEVRELLVTGYVRPEDISRQNAIEYDRIAAARISYGGRGLITDAQRPRYGQEIADT 240
Query: 235 LSP 237
+ P
Sbjct: 241 VLP 243
>gi|328470104|gb|EGF41015.1| flagellar basal body L-ring protein [Vibrio parahaemolyticus 10329]
Length = 234
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 29/248 (11%)
Query: 1 MYRYSFI-----------VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGI 49
M + + LL GC I P N +
Sbjct: 1 MMKLVMMKEKAMKWLSKSWAVAVVLLVGCAGRQEFIPPQP------------NAEEYAPP 48
Query: 50 DFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
+ +S SL+R + LF+D RA VGD+LTV + + + T +++++
Sbjct: 49 KLDYTLPDAQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAV 108
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
+ ++ DG G S S+ KL I V +L NG L
Sbjct: 109 NFAAPTI-----GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLR 163
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
ISG + +R+N + +TGIVR D+ +N VS +IA+ARI+Y G+G +
Sbjct: 164 ISGEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWL 223
Query: 229 HQLIENLS 236
Q +
Sbjct: 224 TQFFNSPW 231
>gi|308094857|ref|ZP_05893052.2| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AN-5034]
gi|308095485|ref|ZP_05906193.2| flagellar L-ring protein FlgH [Vibrio parahaemolyticus Peru-466]
gi|308125941|ref|ZP_05778271.2| flagellar L-ring protein FlgH [Vibrio parahaemolyticus K5030]
gi|308126101|ref|ZP_05907787.2| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ4037]
gi|308086264|gb|EFO35959.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus Peru-466]
gi|308091837|gb|EFO41532.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AN-5034]
gi|308109222|gb|EFO46762.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ4037]
gi|308114954|gb|EFO52494.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus K5030]
Length = 233
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + +S
Sbjct: 11 MKWLSKSWAVAVVLLVGCAGRQEFIPPQP------------NAEEYAPPKLDYTLPDAQS 58
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T ++++++
Sbjct: 59 GSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAVNFAAPTI---- 114
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 115 -GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQ 173
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +IA+ARI+Y G+G + Q +
Sbjct: 174 GDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 230
>gi|90577347|ref|ZP_01233158.1| flagellar L-ring protein precursor [Vibrio angustum S14]
gi|90440433|gb|EAS65613.1| flagellar L-ring protein precursor [Vibrio angustum S14]
Length = 222
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++LC+ S + GC I P N F D S K
Sbjct: 1 MKTLLMLLCFLSFVSGCAVREEFIPPEP------------NDAAFAPPDLDYSLPEAKHG 48
Query: 62 SLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+R ++ LF+D RA VGD+LTV++ Q+ T +++S+
Sbjct: 49 SLYRHNYSMTLFQDRRAYRVGDVLTVELDEQTQSSKKANTKFGKSSSIEFAAPTL----- 103
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + + G G + ++ KL I V +L NG L+I G + +R+N
Sbjct: 104 GNKTFDDLSASVSGDRGFDGTAASTQGNKLQGAITVTVHKVLPNGVLMIRGEKWIRLNQG 163
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG+VR DV+ HN VS +I +ARI+Y G+G + Q +
Sbjct: 164 DEYIRLTGVVRVDDVNRHNQVSSQRIGDARITYSGRGALADSNAAGWLTQFFTSPW 219
>gi|51246535|ref|YP_066419.1| flagellar L-ring protein precursor (FlgH) [Desulfotalea
psychrophila LSv54]
gi|81641310|sp|Q6AJR8|FLGH_DESPS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|50877572|emb|CAG37412.1| related to flagellar L-ring protein precursor (FlgH) [Desulfotalea
psychrophila LSv54]
Length = 231
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 2 YRYSFIVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + C L L GC+S + IP+ L S +T+++
Sbjct: 4 RRIPLYLSCLFLLALSGCNSKRPPLVEIPE---------------PLEELQTMSPATRQA 48
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW + +LF D +A NVGDI+TV I A + T +++S+ + F L
Sbjct: 49 GSLWDSNQNSLFSDRKASNVGDIVTVLIEEKSSASKNASTKTGKDSSIGASIPNLFGLEK 108
Query: 120 ----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
MN + G GS SR+ L+ ++ V NG L I G +EV
Sbjct: 109 SSIIANNHIDMNNLIGASFKNDFKGAGSTSRSGTLSAALSTQVIVKYPNGQLKIRGGKEV 168
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
VN+E++ + +TGI+RP D+ A N+++ DKI ARISY GKG + P + ++++
Sbjct: 169 MVNNEVQVIYLTGIIRPVDITAANTINSDKILNARISYTGKGALGDKQEPGWLTRSLDHV 228
Query: 236 SP 237
P
Sbjct: 229 WP 230
>gi|114765242|ref|ZP_01444374.1| flagellar L-ring protein precursor [Pelagibaca bermudensis
HTCC2601]
gi|114542377|gb|EAU45405.1| flagellar L-ring protein precursor [Roseovarius sp. HTCC2601]
Length = 253
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 83/251 (33%), Positives = 124/251 (49%), Gaps = 17/251 (6%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRM-----PFLGIDFKNSDS 56
R + ++L GC + PQ+SP+G + E P +
Sbjct: 4 RRITLFTGSALTILVGCGT--PAFDRDPQLSPVGVNPSELAAARNVSVPMPPPEAVRVPY 61
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLW + F D RA VGDILT+ I IDD+A N++ R+R S F
Sbjct: 62 RAEGASLWEQGSSGFFGDQRATQVGDILTIIIEIDDEASLSNESDRNRTGSSTLAFPKFF 121
Query: 117 SLFGQQTPQMNG----------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
Q + G ++ ++G GSI R E ++L +AA+V L NGN
Sbjct: 122 GYGTQIDKILPGVGPEDLPEGNLVDITSTTGAAGDGSIERNEAISLRMAALVVQQLPNGN 181
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
L++ G QEV+VN+E+R L V+GI+RPQD++ NS+ YDK+AEARI YGG+G +
Sbjct: 182 LVVLGRQEVKVNEELRELRVSGIIRPQDINRDNSIPYDKMAEARIGYGGRGAISRQQTRG 241
Query: 227 IGHQLIENLSP 237
G +++ + P
Sbjct: 242 YGEDVMDIILP 252
>gi|153837030|ref|ZP_01989697.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
gi|149749618|gb|EDM60363.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
Length = 229
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + +S
Sbjct: 7 MKWLSKSWAVAVVLLVGCAGRQEFIPPQP------------NAEEYAPPKLDYTLPDAQS 54
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T ++++++
Sbjct: 55 GSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAVNFAAPTI---- 110
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 111 -GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQ 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +IA+ARI+Y G+G + Q +
Sbjct: 170 GDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 226
>gi|306841045|ref|ZP_07473769.1| flagellar basal body L-ring protein [Brucella sp. BO2]
gi|306288934|gb|EFM60234.1| flagellar basal body L-ring protein [Brucella sp. BO2]
Length = 242
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 134/225 (59%), Gaps = 7/225 (3%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC + EI P +SP+ + L N F G + ++ SLW FKD R
Sbjct: 20 GCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY---SLWDQRSTNFFKDPR 76
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL----FGQQTPQMNGNLNY 132
A GD+LTV I I+D+A DN+T R R + G F+ M+ ++N
Sbjct: 77 AATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSSITGAAAGGDMDASVNT 136
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
S GKG+I R+E + L IAAIVT L NGNLII GSQEVRVN+E+R LNV G+VRP
Sbjct: 137 HSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVRVNNELRVLNVAGVVRP 196
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ SP
Sbjct: 197 RDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFSP 241
>gi|46398401|gb|AAS91886.1| flagelle L-ring protein [Legionella pneumophila]
Length = 230
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + V C + +LLFGC + + D + P + + K
Sbjct: 1 MNRLNIAVSCLATALLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKA 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ RA + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPRARHPGDILTVYLIEKTDAQKNATTTQRKNDTTKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+++ G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|52841454|ref|YP_095253.1| flagellar basal body L-ring protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|148358809|ref|YP_001250016.1| flagellar L-ring protein FlgH [Legionella pneumophila str. Corby]
gi|296106854|ref|YP_003618554.1| flagellar L-ring protein precursor FlgH [Legionella pneumophila
2300/99 Alcoy]
gi|81377650|sp|Q5ZW65|FLGH_LEGPH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166214822|sp|A5IBC0|FLGH_LEGPC RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|46398375|gb|AAS91873.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398377|gb|AAS91874.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398385|gb|AAS91878.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398393|gb|AAS91882.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398397|gb|AAS91884.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398399|gb|AAS91885.1| flagelle L-ring protein [Legionella pneumophila]
gi|52628565|gb|AAU27306.1| flagellar L-ring protein FlgH [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|148280582|gb|ABQ54670.1| flagellar L-ring protein FlgH [Legionella pneumophila str. Corby]
gi|295648755|gb|ADG24602.1| flagellar L-ring protein precursor FlgH [Legionella pneumophila
2300/99 Alcoy]
Length = 230
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + V C + +LLFGC + + D + P + + K
Sbjct: 1 MNRLNIAVSCLATALLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKV 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ RA + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPRARHPGDILTVYLIEKTDAQKNATTTQRKNDTTKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+++ G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|163742546|ref|ZP_02149932.1| flagellar L-ring protein precursor H [Phaeobacter gallaeciensis
2.10]
gi|161384131|gb|EDQ08514.1| flagellar L-ring protein precursor H [Phaeobacter gallaeciensis
2.10]
Length = 232
Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
L C + + P SP S + + + SLW S +L
Sbjct: 1 MVALSAC-GRLDHVGKPPTFSPANESPEHVAMLFQGLPVNTQNQRPVDQASLWSGSRQSL 59
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
D RA GDILTV I ID++A N T RSR+ S + L + ++ +
Sbjct: 60 LGDRRATKQGDILTVVIEIDEEAEISNDTKRSRSGSESLAVPQLLGLPQRLDRKLPEGAS 119
Query: 132 YDGG------GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+S GKGS+ R+EKL L +AA V +L NG L ISG+QE+RVN E+R L
Sbjct: 120 MADAVDIGSSSSSGGKGSVKRSEKLELRVAATVVDVLPNGVLSISGTQELRVNFEMRELL 179
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VTG VRP D+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+++ + P
Sbjct: 180 VTGYVRPDDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQVLDVILP 231
>gi|126734109|ref|ZP_01749856.1| flagellar L-ring protein FlgH, putative [Roseobacter sp. CCS2]
gi|126716975|gb|EBA13839.1| flagellar L-ring protein FlgH, putative [Roseobacter sp. CCS2]
Length = 244
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 132/245 (53%), Gaps = 10/245 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS--TK 58
M + F + L+ GC +S+I P+ SP + + + + +
Sbjct: 1 MCKGKFFAVVLMLLVTGCG--VSDIGTPPRFSPPAQNTERAAMLNPSMPTPIAASALGPS 58
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW + +L D RA+ GDI+TV I IDD+A N + RSR+ S + F +
Sbjct: 59 SHASLWTGARGSLLGDRRAMQRGDIMTVVIEIDDRAEISNSSDRSRSASQQAGVPQLFGI 118
Query: 119 FGQQTPQMNGN------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ + ++ + ++SG GS+ R E+L L +A +T +L NG L I G
Sbjct: 119 PQRINRALPEGASSAAIVDLNSQSSASGDGSVRRNERLTLRVAVTITDVLPNGVLAIVGQ 178
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QEVRVN E+R L VTG VRP+D+ N ++YDKIA ARISYGG+G+ T + +P +GHQ++
Sbjct: 179 QEVRVNFELRELIVTGYVRPEDITRQNEITYDKIASARISYGGRGQITNMQQPRLGHQVL 238
Query: 233 ENLSP 237
E++ P
Sbjct: 239 ESVLP 243
>gi|86356316|ref|YP_468208.1| flagellar basal body L-ring protein [Rhizobium etli CFN 42]
gi|190890367|ref|YP_001976909.1| flagellar L-ring protein [Rhizobium etli CIAT 652]
gi|86280418|gb|ABC89481.1| flagellar L-ring protein [Rhizobium etli CFN 42]
gi|190695646|gb|ACE89731.1| flagellar L-ring protein [Rhizobium etli CIAT 652]
Length = 238
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 125/224 (55%), Positives = 157/224 (70%), Gaps = 4/224 (1%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC +++SEI P MSP+GS L + P + + K + + YSLW DS AALFKD
Sbjct: 17 GCQSPTAVSEIGRAPAMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+RALNVGDILTVDI+I+D+A FDN+T RSR NS +FG TP+ +L Y
Sbjct: 76 ARALNVGDILTVDIQINDKASFDNETNRSRKNSSGMNWDVNAQIFG-WTPESKTDLTYGS 134
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 135 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 194
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
V+A N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 195 VNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 238
>gi|54294166|ref|YP_126581.1| flagellar basal body L-ring protein [Legionella pneumophila str.
Lens]
gi|54297185|ref|YP_123554.1| flagellar basal body L-ring protein [Legionella pneumophila str.
Paris]
gi|81368773|sp|Q5WX68|FLGH_LEGPL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81370716|sp|Q5X5U0|FLGH_LEGPA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|46398383|gb|AAS91877.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398387|gb|AAS91879.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398389|gb|AAS91880.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398403|gb|AAS91887.1| flagelle L-ring protein [Legionella pneumophila]
gi|53750970|emb|CAH12381.1| flagellar L-ring protein precursor FlgH [Legionella pneumophila
str. Paris]
gi|53753998|emb|CAH15469.1| flagellar L-ring protein precursor FlgH [Legionella pneumophila
str. Lens]
gi|307609980|emb|CBW99509.1| flagellar L-ring protein precursor FlgH [Legionella pneumophila
130b]
Length = 230
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + V C + +LLFGC + + D + P + + K
Sbjct: 1 MNRLNIAVSCLATALLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKV 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ RA + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPRARHPGDILTVFLIEKTDAQKNATTTQRKNDTTKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+++ G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|28900125|ref|NP_799780.1| flagellar basal body L-ring protein [Vibrio parahaemolyticus RIMD
2210633]
gi|81726358|sp|Q87JI3|FLGH2_VIBPA RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|28808408|dbj|BAC61613.1| putative flagellar L-ring protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 223
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + +S
Sbjct: 1 MKWLSKSWAVAVVLLVGCAGRQEFIPPQP------------NAEEYAPPKLDYTLPDAQS 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T ++++++
Sbjct: 49 GSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAVNFAAPTI---- 104
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 105 -GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +IA+ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 220
>gi|296531726|ref|ZP_06894554.1| flagellar L-ring protein FlgH [Roseomonas cervicalis ATCC 49957]
gi|296267942|gb|EFH13741.1| flagellar L-ring protein FlgH [Roseomonas cervicalis ATCC 49957]
Length = 272
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNV 80
P + ++E + + + SLWR + F+D RA V
Sbjct: 51 QKPPTISAPGELAIPPGIEEESPIDVARRPRLDGMGPTMVGSLWRPGARSFFRDQRARMV 110
Query: 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG----QQTPQMNGNLNYDGGG 136
GD+LTV+I IDD A FDN+T R + KL F L G ++ + G
Sbjct: 111 GDLLTVEIEIDDSAQFDNRTDLERESEQTFKLPFLFGLQGVLGRAFGGALDPAVELGGDS 170
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
+ G G I R EK+ L +AA V +L +GNL I+GSQEVRVN+E+R L + G++RP+D+
Sbjct: 171 TAKGNGRIRRTEKIRLQLAATVVRVLPSGNLEIAGSQEVRVNNELRELQLRGLIRPEDIR 230
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+N ++ +KIAEARI+YGG+G ++L RP G Q++E + P
Sbjct: 231 PNNRIASEKIAEARITYGGRGVASDLQRPRWGQQIMERVLP 271
>gi|118581851|ref|YP_903101.1| flagellar L-ring protein [Pelobacter propionicus DSM 2379]
gi|118504561|gb|ABL01044.1| flagellar L-ring protein [Pelobacter propionicus DSM 2379]
Length = 225
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 21/241 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +L ++LL GC + +++ R +
Sbjct: 1 MKCTASTILLATALLSGCVTQTADV-----------------RTTTFDQQLPRPQADYSR 43
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+W+ S A L +D +A GDI+T+ I A + +T SR+ +++ + L
Sbjct: 44 GSIWQASSAGLVEDLKARRKGDIITIVITETANASKEAKTDTSRDTTINAGIPNFLGLEN 103
Query: 121 QQTPQMNGNL----NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+ N +L N + G GS SR E LN I+A V +L N NL+I G + V+
Sbjct: 104 AGFLKNNMDLSKLINANVASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRRNVK 163
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E + + + G VRP D+ N V+ IA+ARISY GKG ++ P +++ L
Sbjct: 164 VNNEDQIIIIEGTVRPSDIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLW 223
Query: 237 P 237
P
Sbjct: 224 P 224
>gi|77359725|ref|YP_339300.1| flagellar basal body L-ring protein [Pseudoalteromonas haloplanktis
TAC125]
gi|110816537|sp|Q3IDW1|FLGH_PSEHT RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|76874636|emb|CAI85857.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein
[Pseudoalteromonas haloplanktis TAC125]
Length = 227
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSI--SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R + + LL GC S+ + P +PM N +
Sbjct: 1 MRNIILFAAGTLLLSGCVSTQNSDVVQDDPYYAPMYPE--------------PNVEPAVA 46
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ L+ D +AL GDI+TV ++ QA +T + + G
Sbjct: 47 NGSLFNTYLSNDLYADKKALRTGDIITVKLQESTQASKAAKTETDKQSDAKLDPVIGLGG 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + G +++ L I+ V +L NGNL+I G + + +N
Sbjct: 107 LPVNIGGDSIQFGIGSDASFKGDSKSNQSNSLAGDISVNVMRVLPNGNLVIRGEKWLTLN 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ + G+VRP+DV A N+V ++IA ARI Y GKG+T E + +L P
Sbjct: 167 SGEEFIRLEGLVRPEDVTADNTVQSNRIANARIQYSGKGQTQEAQSAGWLTRFFSSSLFP 226
>gi|284007172|emb|CBA72456.1| flagellar basal body L-ring protein FlgH [Arsenophonus nasoniae]
Length = 249
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 10/236 (4%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R+ F ++C + ++ GC I P +S P D K + S ++
Sbjct: 23 NRWRFGIICLAVIMSGCA----YIPKKPLVS------GPTTVEPAERPDLKVTGSIYQAS 72
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
S+ LF+D R +VGD LT+ ++ + A ++ SR + +
Sbjct: 73 QPVNYSYQPLFEDRRPRHVGDTLTIILQENVSASKNSSANASRKGKSGFSAGATPQVLNK 132
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ +G GKG + I VT +L NGNL + G +++ +N
Sbjct: 133 LVGVDKLQFDMEGENEFGGKGGANANNTFKGTITVTVTKLLANGNLQVVGEKQIAINQGT 192
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E +++ N+SP
Sbjct: 193 EYIRFSGVVNPRTISGSNTVNSTQVADARIEYVGDGYINEAQNMGWLQRILLNISP 248
>gi|148266114|ref|YP_001232820.1| flagellar L-ring protein [Geobacter uraniireducens Rf4]
gi|146399614|gb|ABQ28247.1| flagellar L-ring protein [Geobacter uraniireducens Rf4]
Length = 229
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 22/239 (9%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ L LL C +E+ R P + S + S+
Sbjct: 7 IKMMSLPVLLLLAACSIRTAEV-----------------RTPAFDEQLQPSRPNYANGSI 49
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
W+DS + D +A GD +TV I A TG +R +S+ + L T
Sbjct: 50 WQDSSSGFADDFKARKRGDTVTVVINEQSSASKQATTGTTRGSSISAGIPNLLGLETNVT 109
Query: 124 P-----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+N ++ G G +R E LN I A V +L NGNL+I G + V+VN
Sbjct: 110 GIKNWMDLNKLISASFDSKFDGSGKTTRQENLNATITAKVVDVLGNGNLLIEGKRNVKVN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+E + + +TG VRP+D+ + N V+ +A+ARI+Y GKG ++ +P L + + P
Sbjct: 170 NEDQVIVLTGTVRPRDISSDNVVNSIYVADARINYSGKGIISDRQKPGWLMGLFDTIWP 228
>gi|289208117|ref|YP_003460183.1| flagellar L-ring protein [Thioalkalivibrio sp. K90mix]
gi|288943748|gb|ADC71447.1| flagellar L-ring protein [Thioalkalivibrio sp. K90mix]
Length = 232
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 19/242 (7%)
Query: 1 MYRYSFIV-----LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R +V L +L C ++ ++ +N + +
Sbjct: 1 MNRLETLVRPILGLAAVLVLSACAAT-------------QPTMPGDNPDYNPVMPPQPVP 47
Query: 56 STKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ + +++ LF+D +A VGDILTV + QA T +++SL
Sbjct: 48 QAQNNGGIYQVAQSQGLFEDYKARQVGDILTVILAESTQAQKSASTSTQKDSSLDLGNLQ 107
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
F + + G G S++ +L+ I V +L NGNL++ G +
Sbjct: 108 AFGGEATHRGRPLFGASNTSTRDFDGSGDSSQSNQLDGEITVTVAEVLPNGNLVVQGEKW 167
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + GIVRP DV +N+V ++A AR+ YGG G + P + +
Sbjct: 168 LGINQGEEYVRFRGIVRPVDVTTNNTVLSTQVANARVYYGGTGVLADSNTPGWITRFFNS 227
Query: 235 LS 236
Sbjct: 228 PW 229
>gi|114046841|ref|YP_737391.1| flagellar basal body L-ring protein [Shewanella sp. MR-7]
gi|123030764|sp|Q0HX21|FLGH_SHESR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|113888283|gb|ABI42334.1| flagellar L-ring protein [Shewanella sp. MR-7]
Length = 224
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 20/240 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY + + + LL C S+ I P +P+
Sbjct: 1 MARYFILAV--ALLLTACSSTSKKPIADDPFYAPVYPE--------------APPTKIAA 44
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++DS A +L+ D RA VGDI+T+ ++ QA + + +
Sbjct: 45 TGSIYQDSQAASLYSDIRAHKVGDIITIVLKEATQAKKSAGNQIKKGSDMSLD-PIYAGG 103
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ +L Y + + ++ L+ I+A V +L NGNL++ G + + +N
Sbjct: 104 SNVSIGGVPLDLRYKDSMNTKRESDADQSNSLDGSISANVMQVLNNGNLVVRGEKWISIN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + VTGIVR QD+ N++ ++A ARI Y G G + + Q + P
Sbjct: 164 NGDEFIRVTGIVRSQDIKPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|46398373|gb|AAS91872.1| flagelle L-ring protein [Legionella pneumophila]
Length = 230
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + V C + +LLFGC + + D + P + + K
Sbjct: 1 MNRLNIAVSCLATALLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKV 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ +A + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPKARHPGDILTVFLIEKTDAQKNATTTQRKNDTTKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+++ G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|254227986|ref|ZP_04921416.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
gi|151939482|gb|EDN58310.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S + LL GC I P N + + +S
Sbjct: 11 MKWLSKSWAVAAVLLVGCAGRQEFIPPEP------------NAEEYAPPTLDYTLPETQS 58
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T ++++++ +
Sbjct: 59 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLSEETSSSKKAGTKFGKSSAVNFAAPTIGTKT 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 119 FDELG-----VSVDGSRNFDGSASSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 173
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D++ N VS +IA+ARI+Y G+G + Q +
Sbjct: 174 GDEFIRLTGIVRVDDINRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 230
>gi|254465003|ref|ZP_05078414.1| flagellar L-ring protein FlgH [Rhodobacterales bacterium Y4I]
gi|206685911|gb|EDZ46393.1| flagellar L-ring protein FlgH [Rhodobacterales bacterium Y4I]
Length = 246
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 119/225 (52%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
+ + P +P + + + + T SLW S +L D RA+
Sbjct: 21 CGRMDHLGKPPSFTPANETSEHVAMLYEGLPAQTQNRRTVDGSSLWSGSQQSLLGDRRAI 80
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG--- 135
GDILTV I ID++A N T RSR+ S + L + ++
Sbjct: 81 KRGDILTVVIEIDEEAEISNDTQRSRSGSESLNMPQLLGLPQRLDRKLPEGATSADAVEL 140
Query: 136 ---GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
++ GKGS+ R+EKL L +AA V +L NG L ISG+QE+RVN E+R L VTG VRP
Sbjct: 141 GSSSSAGGKGSVKRSEKLELRVAATVVDVLPNGVLAISGTQELRVNFELRELLVTGYVRP 200
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
QD+ N ++YDKIA AR+SYGG+G+ T++ +P G QL++ + P
Sbjct: 201 QDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQLLDAVLP 245
>gi|330830300|ref|YP_004393252.1| flagellar L-ring protein [Aeromonas veronii B565]
gi|328805436|gb|AEB50635.1| Flagellar L-ring protein [Aeromonas veronii B565]
Length = 224
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 20/241 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + +++ L GC S+ + P+ SP+ + + P
Sbjct: 1 MMKAVWMLGLLV--LGGCSSTPNTPKPDDPEFSPVYGESEPVSVRP-------------- 44
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ D ++ D +A VGDI+T+++ A T +NN + +
Sbjct: 45 TGAIFQPDQVNGIYSDIKAHKVGDIITIELSESTSASKKANTQSGKNNKFNLDPVKLGGV 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+P + + + A G+ ++ L I+ V +L NGNL++ G + + +N
Sbjct: 105 PVTASP-YDLSASIAQDSAFKGQAKADQSNSLQGNISVSVAKVLPNGNLVVRGEKWIMLN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + +TG++RP+DV + NSVS K+A ARI YGG G P
Sbjct: 164 NGNEYIRITGLIRPEDVTSDNSVSSQKVANARIYYGGTGDLANSQEQGWLTSFFNGPWWP 223
Query: 238 L 238
L
Sbjct: 224 L 224
>gi|260429182|ref|ZP_05783159.1| flagellar L-ring protein FlgH [Citreicella sp. SE45]
gi|260419805|gb|EEX13058.1| flagellar L-ring protein FlgH [Citreicella sp. SE45]
Length = 243
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
S + + P +P S++ + + SLW +L D RA+
Sbjct: 18 CSRLDHVGKPPSFTPQTESVERVAMAYSGMPTVILPERASERASLWSRERNSLLGDRRAM 77
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG------QQTPQMNGNLNY 132
GDILTV I ID+ A N T RSRN S + F + + ++
Sbjct: 78 ARGDILTVVIEIDESADISNSTSRSRNGSESLSIPQLFGIPQRHEHKMPDGSSLTNPVDL 137
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
+S G G +SR+EKL L +AA + +L NG L I G QEVRVN E+R L V+G VRP
Sbjct: 138 SSQASSGGDGQVSRSEKLALRVAATILEVLPNGVLAIQGMQEVRVNFEMRELLVSGYVRP 197
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ +N ++YDKIA ARISYGG+G+ T++ +P IG Q+++ + P
Sbjct: 198 EDITRNNEITYDKIASARISYGGRGQITDVQQPRIGQQVLDVILP 242
>gi|260779344|ref|ZP_05888236.1| flagellar L-ring protein FlgH [Vibrio coralliilyticus ATCC BAA-450]
gi|260605508|gb|EEX31803.1| flagellar L-ring protein FlgH [Vibrio coralliilyticus ATCC BAA-450]
Length = 223
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + LL GC +P E + + S ++
Sbjct: 1 MKALLRVWPLVVILLAGCAGRQE-------FTP-----PEPDEEKYAPPTLDYSLPAAQN 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + ++ T +N+S+
Sbjct: 49 GSLYRHQYSMTLFQDRRAYRVGDMLTVVLSEETESSKKADTKYGKNSSVGFAAPSLGGKT 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + D A G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 109 IDELA-----ASVDAQRAFDGSASSSQGNKLEGAITVTVHEVLPNGVLRISGEKWIRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +I +ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDISRNNQVSSARIGDARITYSGRGTLADSNAAGWLSQFFNSPW 220
>gi|84502381|ref|ZP_01000517.1| flagellar L-ring protein precursor [Oceanicola batsensis HTCC2597]
gi|84389193|gb|EAQ01990.1| flagellar L-ring protein precursor [Oceanicola batsensis HTCC2597]
Length = 257
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 4 YSFIVLCYSSLLFGCHSSI---SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
I + GC S +MSP ++P + + +
Sbjct: 11 RLTISTLAVVAVAGCASDPFDRDPRISGVEMSPHVMPEVARVQVPMPPPEVPRTPERGEQ 70
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW+ F D RA VGDILT+ I IDDQA N T R R+ + F
Sbjct: 71 SSLWQRGSGGFFADQRATKVGDILTITIEIDDQAQLSNSTDRERSGNSEFTKPQFFGYAS 130
Query: 121 QQTPQMNG---------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+ + G + +SG GSI+R E ++L +AA+V +L NGN++++G
Sbjct: 131 KLHKILPGVGAGQVPDPLVQSSSSTTASGSGSIARNETISLKVAALVVQMLPNGNMVVAG 190
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
QEV+VN+E+R L V GI+RP+D+ +N++ Y+KIAEARI+YGG+G + G +
Sbjct: 191 RQEVKVNEELRELRVAGIIRPEDIATNNTIPYEKIAEARITYGGEGSLSRQQSRSYGEDI 250
Query: 232 IENLSP 237
++ + P
Sbjct: 251 VDIVLP 256
>gi|46398379|gb|AAS91875.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398381|gb|AAS91876.1| flagelle L-ring protein [Legionella pneumophila]
gi|46398391|gb|AAS91881.1| flagelle L-ring protein [Legionella pneumophila]
Length = 230
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 1 MYRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + V C + +LLFGC + + D + P + + K
Sbjct: 1 MNRLNIAVSCLATALLFGCEALHP-----------PAPGDNPDYAPTYPVTPDPKELRKV 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ RA + GDILTV + A + T + +N++
Sbjct: 50 SGAIYSSETALPLFETPRARHPGDILTVFLIEKTDAQKNATTTQRKNDTTKITNKLFLGR 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D +G+G + KL I+ V +L NGN+II G + VR+N
Sbjct: 110 PISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMIIQGEKWVRIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A N+++ D+IA ARISYGG G+ +++
Sbjct: 170 QGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
>gi|119775447|ref|YP_928187.1| flagellar basal body L-ring protein [Shewanella amazonensis SB2B]
gi|166214826|sp|A1S811|FLGH_SHEAM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|119767947|gb|ABM00518.1| flagellar L-ring protein FlgH [Shewanella amazonensis SB2B]
Length = 224
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 20/240 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSI-SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY + +L GC S+ I P +P+ P
Sbjct: 1 MLRYLM--VGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEP-------------- 44
Query: 60 SYSLW-RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S++ A+L+ D RA VGDI+TV + QA + + L+
Sbjct: 45 TGSIFLDSQAASLYTDIRAHRVGDIITVVLTESTQATKSANNEIKKGSDLNMDAIQALGG 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ +L Y + + ++ L I+A V +L NGNL+I G + + +N
Sbjct: 105 PVTISGN-PLSLGYSDSMNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWISIN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + VTG++RPQD+ N+V ++A ARI Y G G + Q + P
Sbjct: 164 NGDEFIRVTGVIRPQDITTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWP 223
>gi|145298494|ref|YP_001141335.1| flagellar basal body L-ring protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851266|gb|ABO89587.1| flagellar L-ring protein FlgH [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 224
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + +++ + L GC S+++ P+ +P+ D + P
Sbjct: 1 MMKTIWMLGLLA--LGGCSSTLNTAKPDDPEFAPVYGESDPVSVRP-------------- 44
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ D ++ D +A VGDI+T+++ A T ++N L + +
Sbjct: 45 TGAIFQPDQVNGIYSDIKAHKVGDIITIELAESTSASKKANTQSGKDNKLSMEPVTLGGV 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
P + + + A G+ ++ L I+ V +L NGNL++ G + + +N
Sbjct: 105 PVTAGP-YDLSASLGQNSAFKGQAKADQSNSLQGNISVSVAKVLPNGNLVVRGEKWIMLN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + +TG++RP+DV + NSVS ++A ARI YGG G P
Sbjct: 164 NGNEYIRITGMIRPEDVTSENSVSSQRVANARIHYGGTGDLANSQEQGWLTSFFNGPWWP 223
Query: 238 L 238
L
Sbjct: 224 L 224
>gi|239834438|ref|ZP_04682766.1| Flagellar L-ring protein precursor [Ochrobactrum intermedium LMG
3301]
gi|239822501|gb|EEQ94070.1| Flagellar L-ring protein precursor [Ochrobactrum intermedium LMG
3301]
Length = 242
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 136/225 (60%), Gaps = 7/225 (3%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC + EI P +SP+ ++L N G + S ++ SLW FKD R
Sbjct: 20 GCATKPEEIGRAPDLSPVAANLGMQNNPQSNGYPARPSKASY---SLWDQRSTNFFKDPR 76
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF----SLFGQQTPQMNGNLNY 132
A GD+LTV I I+D+A DN+T R R + G F S M+ ++N
Sbjct: 77 AATPGDVLTVIISINDRANLDNKTDRERVSKGIYGAGGSFATSSSTGAGAGGDMDASVNT 136
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
S GKG+I R+E + L +AAIVT L NGN+II GSQEVRVN+E+R LNV G+VRP
Sbjct: 137 HSDSKSKGKGTIERSEDIRLQVAAIVTDTLPNGNMIIRGSQEVRVNNELRVLNVAGVVRP 196
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ +SP
Sbjct: 197 RDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQVSP 241
>gi|325291935|ref|YP_004277799.1| Flagellar basal body L-ring protein [Agrobacterium sp. H13-3]
gi|325059788|gb|ADY63479.1| Flagellar basal body L-ring protein [Agrobacterium sp. H13-3]
Length = 238
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 121/224 (54%), Positives = 156/224 (69%), Gaps = 4/224 (1%)
Query: 17 GCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC + ++ EI P MSP+GS L + ++ P +G+ K YSLW DS ALFKD
Sbjct: 17 GCQNNQTLKEIGNAPAMSPIGSGL-QFSQTPQMGMYPKQPKHMASGYSLWSDSQGALFKD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RALN+GDILTV+I+I+D+A FDN+T R+R NS + G TP+ + N+ Y
Sbjct: 76 LRALNIGDILTVNIQINDKADFDNETERNRTNSSGLNWKAKAEILG-WTPEADSNIKYGS 134
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
+ KG R+EKL L++AA+VT ILENGNLIISGSQEVRVN EIR LNV GIVRPQD
Sbjct: 135 DTDTQAKGKTKRSEKLTLMVAAVVTGILENGNLIISGSQEVRVNHEIRILNVGGIVRPQD 194
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
VDA N +SY++IAEARISYGG+GR TE+ +PP+G Q+++ SPL
Sbjct: 195 VDAQNMISYERIAEARISYGGRGRLTEVQQPPVGQQVVDLFSPL 238
>gi|306846274|ref|ZP_07478835.1| flagellar basal body L-ring protein [Brucella sp. BO1]
gi|306273269|gb|EFM55138.1| flagellar basal body L-ring protein [Brucella sp. BO1]
Length = 238
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 133/225 (59%), Gaps = 7/225 (3%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC EI P +SP+ + L N F G + ++ SLW FKD R
Sbjct: 16 GCAIKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY---SLWDQRSTNFFKDPR 72
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL----FGQQTPQMNGNLNY 132
A GD+LTV I I+D+A DN+T R R + G F+ M+ ++N
Sbjct: 73 AATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSFATSSITGAAAGGDMDASVNT 132
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
S GKG+I R+E + L IAAIVT L NGNLII GSQEVRVN+E+R LNV G+VRP
Sbjct: 133 HSDSKSKGKGTIERSEDIRLQIAAIVTDTLPNGNLIIRGSQEVRVNNELRVLNVAGVVRP 192
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ +N++SYDKIAEARISYGG+GR +E+ +PP G Q+++ SP
Sbjct: 193 RDISGNNTISYDKIAEARISYGGRGRLSEIQQPPYGQQILDQFSP 237
>gi|83647170|ref|YP_435605.1| flagellar basal body L-ring protein [Hahella chejuensis KCTC 2396]
gi|110816531|sp|Q2SDU4|FLGH_HAHCH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|83635213|gb|ABC31180.1| Flagellar basal body L-ring protein [Hahella chejuensis KCTC 2396]
Length = 227
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 19/242 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + I L +LL GC S G P +P+
Sbjct: 1 MKTLTLISLIMVTLLSGCSPISREQVRPGDPAFAPV--------------PPQTLMQPAP 46
Query: 59 KSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S++ + +LF D A VGD+LTV ++ Q+ T +++ +
Sbjct: 47 VDGSIYSSAQNFSLFGDRTAHQVGDVLTVVLQESTQSSKSTGTSMKKDSENSFNEATILG 106
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
++ + + SG+ ++ L+ I+ ++ +L NG L I G + + +
Sbjct: 107 TAISAHN-LSLLTDQNFERDFSGEADADQSNSLSGSISVTISDVLPNGVLRIRGEKWLTL 165
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS- 236
+ L V+G+VRPQD+ N++ KIA+AR +Y G G ++ R + +
Sbjct: 166 TEGDEYLRVSGLVRPQDIGVDNTILSSKIADARFAYSGAGAFGDVNRAGWLQRFFNSEWF 225
Query: 237 PL 238
PL
Sbjct: 226 PL 227
>gi|319409183|emb|CBI82827.1| Flagellar L-ring protein [Bartonella schoenbuchensis R1]
Length = 247
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 8/231 (3%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ L C + + P SP+ + L P F + YSL+R +
Sbjct: 23 ISLMLMPLAACSYNPKDFNSTPDFSPVRADL---GFAPSRAAHFYPPAPKESKYSLYRPN 79
Query: 68 H-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
++D RA+ GD+LTV I I+D+A F+N++ R++S + +S ++
Sbjct: 80 VVNNFYRDPRAMKPGDVLTVQIFINDRASFNNKSDLKRDSSSKYTVGTEYSF----LEKL 135
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
G + S G G + R E + L IAA+VT +L NGNL+ISGSQEVRVN E+R LN+
Sbjct: 136 AGGVEASSSNQSKGDGKVERQENIRLSIAAVVTDVLPNGNLVISGSQEVRVNYEMRILNI 195
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
G+VRP+D+ A+N + YDKIAEARISYGG+GR +E+ +PP G QL+ ++P
Sbjct: 196 AGVVRPRDISANNMIDYDKIAEARISYGGRGRMSEIQQPPYGQQLLNQIAP 246
>gi|153831745|ref|ZP_01984412.1| flagellar L-ring protein FlgH [Vibrio harveyi HY01]
gi|156976144|ref|YP_001447050.1| flagellar basal body L-ring protein [Vibrio harveyi ATCC BAA-1116]
gi|148872255|gb|EDL71072.1| flagellar L-ring protein FlgH [Vibrio harveyi HY01]
gi|156527738|gb|ABU72823.1| hypothetical protein VIBHAR_04915 [Vibrio harveyi ATCC BAA-1116]
Length = 229
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + KS
Sbjct: 7 MKWLSKSWAVAVVLLVGCAGRDEFIPPEP------------NTEEYAPPVLDYTLPETKS 54
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T +++++ +
Sbjct: 55 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLSEETSSSKKAGTQFGKSSTVDFAAPTIGTKT 114
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG + G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 115 IDELG-----VSVDGSRSFDGSASSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ N VS +IA+ARI+Y G+G + Q +
Sbjct: 170 GDEFIRLTGIVRVDDISRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 226
>gi|88858140|ref|ZP_01132782.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein
[Pseudoalteromonas tunicata D2]
gi|88819757|gb|EAR29570.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein
[Pseudoalteromonas tunicata D2]
Length = 227
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISE--ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ + I LC L GC S+ + I P +P+ ++ +
Sbjct: 1 MKNTLISLCAIFLSVGCVSTGNRNVIVDDPYFTPI--------------PAEAETEPMVQ 46
Query: 60 SYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ + L+ D +A+ VGDI+TV + QA +T + + G
Sbjct: 47 TGSLFDAYNSNDLYSDKKAVRVGDIITVMLNESTQASKSAKTESGKATDIALNPLVGLGG 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ L + G +++ L+ I+ V +L NGNL+I G + + +N
Sbjct: 107 KNVNIGGQSIELGLKSDSSYKGDAKSNQSNSLSGNISVNVMRVLPNGNLMIRGEKWLTLN 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + G+VR DV A N+V ++IA ARI Y GKG + + + L P
Sbjct: 167 TGEEFIRLEGVVRASDVAADNTVESNRIANARIQYSGKGDLQDAQSSGWLSRFFMSALFP 226
>gi|241203110|ref|YP_002974206.1| flagellar basal body L-ring protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857000|gb|ACS54667.1| flagellar L-ring protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 238
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 124/224 (55%), Positives = 156/224 (69%), Gaps = 4/224 (1%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC +++SEI P MSP+GS L + P + + K + + YSLW DS AALFKD
Sbjct: 17 GCQSPTAVSEIGRAPAMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+RALNVGDILTVDI+I+D+ FDN+T RSR NS +FG TP+ +L Y
Sbjct: 76 ARALNVGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIFG-WTPESKTDLTYGS 134
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 135 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 194
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
V+A N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 195 VNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 238
>gi|39998139|ref|NP_954090.1| flagellar L-ring protein FlgH [Geobacter sulfurreducens PCA]
gi|39985085|gb|AAR36440.1| flagellar L-ring protein FlgH [Geobacter sulfurreducens PCA]
Length = 221
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 24/235 (10%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA 69
L GC +E+ R P + + + + S+W+ S
Sbjct: 3 IICLALAGCAVEKTEV-----------------RTPTFDEQLRPAPPSYANGSIWQASTT 45
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ-------Q 122
L D +A + GDI+TV I A + T R + + L
Sbjct: 46 GLAVDHKARSRGDIITVLIVEQASASKEATTDTERKAEVSASVPYLMGLEKSSTLFSKLT 105
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
N L G G+ +R E L + A +T +L NGN +I G + V+VN+E +
Sbjct: 106 NANPNNLLGASTNSKYEGSGATTRKENLLATMTAKITDVLPNGNFLIEGRRNVKVNNEDQ 165
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L + G +RP+DV N++S IA+ARISY G G ++ RP +++ + P
Sbjct: 166 ILVLQGTIRPRDVSPDNTISSTMIADARISYTGNGVISDRQRPGWLMNILDYIWP 220
>gi|119469953|ref|ZP_01612758.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Alteromonadales
bacterium TW-7]
gi|119446663|gb|EAW27936.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Alteromonadales
bacterium TW-7]
Length = 227
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSI--SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R+ + + L GC S+ + P +PM + +
Sbjct: 1 MRHYMLFAVGTLFLSGCVSTQNSDVVQDDPYYAPMYPE--------------PSMEPVVA 46
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ + L+ D +AL GDI+TV+++ QA +T + + G
Sbjct: 47 TGSLFNTNVSNDLYADRKALRTGDIITVNLQESTQATKAAKTETDKQSDASLDPVIGLGG 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + +G +++ L I+ V +L NGNL+I G + + +N
Sbjct: 107 LPVNIGGDSIQFGIGSDASFTGDSKSNQSNSLFGNISVNVMRVLPNGNLVIRGEKWLTLN 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ + G+VRPQDV + N+V ++IA ARI Y GKG+T E + ++ P
Sbjct: 167 TGEEFIRLEGLVRPQDVSSDNTVESNRIANARIQYSGKGQTQEAQSAGWLTRFFSSSIFP 226
>gi|269960119|ref|ZP_06174495.1| Flagellar L-ring protein precursor [Vibrio harveyi 1DA3]
gi|269835090|gb|EEZ89173.1| Flagellar L-ring protein precursor [Vibrio harveyi 1DA3]
Length = 223
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + KS
Sbjct: 1 MKWLSKSWAVAVVLLVGCAGRQEFIPPEP------------NTEEYAPPVLDYTLPEAKS 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + ++ T +++++ +
Sbjct: 49 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLSEETESSKKAGTQFGKSSTVDFATPTIGTKT 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 109 IDELG-----VSIDGSRNFDGSASSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D++ N VS +IA+ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDINRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 220
>gi|262396032|ref|YP_003287885.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
gi|262339626|gb|ACY53420.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
Length = 223
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S + LL GC I P N + + +S
Sbjct: 1 MKWLSKSWAVAAVLLVGCAGRQEFIPPEP------------NAEEYAPPTLDYTLPETQS 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T ++++++ +
Sbjct: 49 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLSEETSSSKKAGTKFGKSSAVNFAAPTIGTKT 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 109 FDELG-----VSVDGSRNFDGSASSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D++ N VS +IA+ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDINRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 220
>gi|209547932|ref|YP_002279849.1| flagellar basal body L-ring protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533688|gb|ACI53623.1| flagellar L-ring protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 238
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 124/224 (55%), Positives = 156/224 (69%), Gaps = 4/224 (1%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC +++SEI P MSP+GS L + P + + K + + YSLW DS AALFKD
Sbjct: 17 GCQSPTAVSEIGRAPSMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKD 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+RALNVGDILTVDI+I+D+ FDN+T RSR NS +FG TP+ +L Y
Sbjct: 76 ARALNVGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIFG-WTPESKTDLTYGS 134
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 135 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 194
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
V+A N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 195 VNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 238
>gi|15887894|ref|NP_353575.1| flagellar basal body L-ring protein [Agrobacterium tumefaciens str.
C58]
gi|2494535|sp|Q44342|FLGH_AGRT5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|1086565|gb|AAB68972.1| FlgH [Agrobacterium tumefaciens]
gi|2459718|gb|AAB71794.1| FlgH [Agrobacterium tumefaciens]
gi|15155486|gb|AAK86360.1| flagellar L-ring protein precursor [Agrobacterium tumefaciens str.
C58]
Length = 239
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 120/224 (53%), Positives = 155/224 (69%), Gaps = 4/224 (1%)
Query: 17 GCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC + ++ EI P MSP+GS L + ++ P +G+ K YSLW DS ALFKD
Sbjct: 18 GCQNNQTLKEIGNAPAMSPIGSGL-QFSQTPQMGMYPKQPKHMASGYSLWSDSQGALFKD 76
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RALN+GDILTV+I+I+D+A FDN+T R+R N+ + G TP + ++ Y
Sbjct: 77 LRALNIGDILTVNIQINDKADFDNETERNRTNASGLNWKAKAQILG-WTPDADSSIKYGS 135
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
+ KG R+EKL LL+AA+VT ILENGNLIISGSQEVRVN EIR LNV GIVRPQD
Sbjct: 136 DTDTQAKGKTKRSEKLTLLVAAVVTGILENGNLIISGSQEVRVNHEIRILNVGGIVRPQD 195
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
VDA N +SY++IAEARISYGG+GR TE+ +PP+G Q+++ SPL
Sbjct: 196 VDAQNIISYERIAEARISYGGRGRLTEVQQPPVGQQVVDLFSPL 239
>gi|323492335|ref|ZP_08097488.1| flagellar basal body L-ring protein [Vibrio brasiliensis LMG 20546]
gi|323313382|gb|EGA66493.1| flagellar basal body L-ring protein [Vibrio brasiliensis LMG 20546]
Length = 223
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S + LL GC +P E + + S +
Sbjct: 1 MKALSKTWPLVAVLLVGCAGRQE-------FTP-----PEPDEEKYAPPALDYSLPAPQH 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + ++ T ++ S+
Sbjct: 49 GSLYRHQYTMTLFQDRRAYRVGDMLTVVLSEETESSKKADTQYGKSASVGFAAPSIAGKT 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + D + G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 109 IDELA-----ASIDADRSFDGSASSSQGNKLEGAITVTVHDVLPNGVLRISGEKWIRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N V +I +ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDISRNNQVPSSRIGDARITYSGRGALADSNASGWLTQFFNSPW 220
>gi|114762166|ref|ZP_01441634.1| flagellar L-ring protein precursor H [Pelagibaca bermudensis
HTCC2601]
gi|114545190|gb|EAU48193.1| flagellar L-ring protein precursor H [Roseovarius sp. HTCC2601]
Length = 242
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 76/224 (33%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALN 79
S + + P +P S + SLW ++L D RA+
Sbjct: 18 SRLDHLGKAPSFTPQEQSPERVAMAYSGVPTVALPQRQTDQASLWSRERSSLLGDRRAMK 77
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN------LNYD 133
GDILTV I IDD+A N T RSR+ S + + + + ++
Sbjct: 78 QGDILTVVIEIDDEASISNSTSRSRSGSESLSVPQLLGIPQRIDEDLPLGATMADAVDLG 137
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
AS G G + R E+L L +AA +T ++ NG L I G+QEVRVN E+R L V+G VRP+
Sbjct: 138 SQAASGGDGQVQRREELTLRVAATITDVMPNGVLAIEGAQEVRVNFELRELLVSGFVRPE 197
Query: 194 DVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
D+ N ++YDKIA A+ISYGG+G+ +++ +P G Q+++ + P
Sbjct: 198 DITRQNEITYDKIASAKISYGGRGQISDMQQPRYGQQVLDIVLP 241
>gi|91224196|ref|ZP_01259459.1| flagellar L-ring protein precursor H [Vibrio alginolyticus 12G01]
gi|269965647|ref|ZP_06179760.1| Flagellar L-ring protein precursor [Vibrio alginolyticus 40B]
gi|91191107|gb|EAS77373.1| flagellar L-ring protein precursor H [Vibrio alginolyticus 12G01]
gi|269829715|gb|EEZ83951.1| Flagellar L-ring protein precursor [Vibrio alginolyticus 40B]
Length = 233
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S + LL GC I P N + + +S
Sbjct: 11 MKWLSKSWAVAAVLLVGCAGRQEFIPPEP------------NAEEYAPPTLDYTLPETQS 58
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + + T ++++++ +
Sbjct: 59 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLSEETSSSKNAGTKFGKSSAINFVAPTIGTKT 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 119 IDELG-----VSVDGKRNFDGSASSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 173
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D++ N VS +IA+ARI+Y G+G + Q +
Sbjct: 174 GDEFIRLTGIVRVDDINRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 230
>gi|239995122|ref|ZP_04715646.1| flagellar basal body L-ring protein [Alteromonas macleodii ATCC
27126]
Length = 226
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 18/239 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEI--TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +L GC S+ P +P+ ++ +
Sbjct: 2 RILGLSAALLILGGCASTNEPPVQANDPSFAPVVPDY--------------PRETVVEDG 47
Query: 62 SLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+R L+ D A VGDI+TV + + QA T +++++++ G +
Sbjct: 48 SLFRSQLANNLYSDVTARRVGDIITVTLSENTQASKSADTSTAKDSNVNLNPITGLAGQA 107
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ L SG + +++ LN I+ V +L N NL+I G + + +N
Sbjct: 108 INIGGESVQLGISSSRDFSGDATANQSNSLNGAISVTVVDVLPNSNLVIRGEKWLTLNQG 167
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ +TGI+RP D+ N + K+A ARI Y G G + ++ PL
Sbjct: 168 DEYIRLTGIIRPADISPENEIVSTKVANARIQYSGTGSFARAQEKGWLTKFFDSAWWPL 226
>gi|89092139|ref|ZP_01165094.1| Flagellar basal body L-ring protein [Oceanospirillum sp. MED92]
gi|89083874|gb|EAR63091.1| Flagellar basal body L-ring protein [Oceanospirillum sp. MED92]
Length = 225
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 17/239 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L + L GC + P+ +P+ + +
Sbjct: 1 MNKLVIGFLVSTLFLTGCVQKQVKPNN-PEYAPIVP--------------QALTQPAPVN 45
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ + + L+ D RA VGDILT+ ++ + +T ++++L
Sbjct: 46 GSIYNSATSINLYGDGRAHRVGDILTITLQESTSSQKSAKTELDKSSNLSLAQPTLLGQT 105
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ G+GS + L I V +L NG L++ G + + +N
Sbjct: 106 VDINGRPLSATLNGPTLDFDGEGSSDMSNNLTGNITVTVHDVLPNGVLLVKGEKWLTLNQ 165
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ ++G+VRPQD+ + NSV K+A+ARI+Y G G + + L P
Sbjct: 166 GDEYIRISGMVRPQDIGSDNSVMSTKLADARITYSGTGAVNDTNVMGWVSKFFISALMP 224
>gi|16126305|ref|NP_420869.1| flagellar basal body L-ring protein [Caulobacter crescentus CB15]
gi|221235082|ref|YP_002517518.1| flagellar basal body L-ring protein [Caulobacter crescentus NA1000]
gi|13637801|sp|P22606|FLGH_CAUCR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|13423545|gb|AAK24037.1| flagellar L-ring protein [Caulobacter crescentus CB15]
gi|220964254|gb|ACL95610.1| flagellar L-ring protein flgH [Caulobacter crescentus NA1000]
Length = 244
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
S++ E P ++P+G + + + SLWR A F D RA
Sbjct: 19 CSTVKEAVKGPDLAPVGYPAPLAPMQQQYVSAREPAPQAASANSLWRVGARAFFNDQRAS 78
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN------LNY 132
VGDI+TV I IDD A N T SR ++ + + + G L
Sbjct: 79 RVGDIVTVMIDIDDSASTKNATNSSRTANMKAGVPHLLGMESSLGKFLPGGFDPASALET 138
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
+ ++G G +SR+EK++L IAA+V+ +L NGN++I G+QEVR N E+R L V GIVRP
Sbjct: 139 NSTTTNAGSGGVSRSEKISLTIAAVVSQVLPNGNMVIQGTQEVRTNAELRQLTVAGIVRP 198
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ + N++ + +IAEARISYGG+G + + + P G L+E SP
Sbjct: 199 EDISSANTIRHTQIAEARISYGGRGDISRVQKTPAGQSLVEKFSP 243
>gi|46578930|ref|YP_009738.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603469|ref|YP_967869.1| flagellar basal body L-ring protein [Desulfovibrio vulgaris DP4]
gi|81567114|sp|Q72EQ4|FLGH_DESVH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166214820|sp|A1VG76|FLGH_DESVV RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|46448342|gb|AAS94997.1| flagellar L-ring protein FlgH [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563698|gb|ABM29442.1| flagellar L-ring protein [Desulfovibrio vulgaris DP4]
gi|311232788|gb|ADP85642.1| flagellar L-ring protein [Desulfovibrio vulgaris RCH1]
Length = 238
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + C L+ GC+++ + + +P ++P + +
Sbjct: 1 MIRKTLAASCAVLLMAGCNAARQQASPLPPVAP-------------PQTYVEPEQAAANP 47
Query: 61 YSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ D+ A L F DSRA VGDI+ V I + +A T R+++ + + F
Sbjct: 48 GSMFNDAEADLMFSDSRARRVGDIVLVKIVENAKAKNKADTTSERDSTNNYTVGAYFGQD 107
Query: 120 GQQTPQMNG------------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
MN L GKG R + IAA V ++ G L
Sbjct: 108 SASINPMNPVGAFGGKVGTNALLQTGSKSKLDGKGETKRENTVTATIAARVVRVMPGGLL 167
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G++E RVNDE + + ++G+VR +DV + NSV ++A++RI+Y GKG + RP
Sbjct: 168 QVEGARETRVNDETQYIVLSGLVRSRDVASDNSVMSTQLADSRIAYYGKGVLADKQRPGW 227
Query: 228 GHQLIENLSP 237
+L++NL P
Sbjct: 228 FSRLMDNLWP 237
>gi|146294547|ref|YP_001184971.1| flagellar basal body L-ring protein [Shewanella putrefaciens CN-32]
gi|145566237|gb|ABP77172.1| flagellar L-ring protein [Shewanella putrefaciens CN-32]
Length = 220
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++ L +LL GC S I + P + + S K SL+R
Sbjct: 3 WLWLLCFALLSGCMSHIPDQETKP------------GTKEWAPPEIDYSLPDAKDGSLYR 50
Query: 66 DSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ LFKD RA GDILTV + + T ++ + L G
Sbjct: 51 PGYMLTLFKDKRAFREGDILTVALDEKTYSSKKADTKTNKEQDIGMGLKGNVG-----EK 105
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ + +G GS ++ +L+ I V+ +L NG L+I G + +R+N L
Sbjct: 106 TADADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQGDEYL 165
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
+ GI+R D+ +N++S +IA+ARI YGG+G + + + PL
Sbjct: 166 RLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL 220
>gi|224370758|ref|YP_002604922.1| FlgH [Desulfobacterium autotrophicum HRM2]
gi|223693475|gb|ACN16758.1| FlgH [Desulfobacterium autotrophicum HRM2]
Length = 234
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 1 MYRYSFIVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + L + L L GC S + + + P G + D+ P +
Sbjct: 1 MMKQIMSALVLTVLALTGCMGSTTNRSSSGALLPQG-TSDQPVLQPKYAVVPP------S 53
Query: 60 SYSLW-RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW DS A F+D++A VGD + VDI + + D T SR ++ +S F +
Sbjct: 54 EGSLWTSDSRARFFEDTKASMVGDTVIVDIVENTSSQMDVNTETSRETGVNVGISNLFGV 113
Query: 119 FGQQTPQMNGNL-NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G L D G+ R+ + IAA +T IL NGNL + G + ++V
Sbjct: 114 TRGFGATGAGKLVGADYSNDFKGEAKNDRSGSITASIAARITEILPNGNLSLFGRRAMKV 173
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E++ ++V+G++RP D+ A N V +A++RI Y GKG + P G ++++N+ P
Sbjct: 174 NGEVQYISVSGVLRPGDIMADNRVKSTYLADSRIEYSGKGVLADKQNPGWGTRIMDNIWP 233
>gi|120597308|ref|YP_961882.1| flagellar basal body L-ring protein [Shewanella sp. W3-18-1]
gi|120557401|gb|ABM23328.1| flagellar L-ring protein [Shewanella sp. W3-18-1]
Length = 220
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++ L +LL GC S I + P + + S K SL+R
Sbjct: 3 WLWLLCFALLSGCMSHIPDQETKP------------GTKEWAPPEIDYSLPDAKDGSLYR 50
Query: 66 DSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ LFKD RA GDILTV + + T ++ + L G
Sbjct: 51 PGYMLTLFKDKRAFREGDILTVALDEKTYSSKKADTKTNKEQDIGMGLKGNIG-----EK 105
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ + +G GS ++ +L+ I V+ +L NG L+I G + +R+N L
Sbjct: 106 TADADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQGDEYL 165
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
+ GI+R D+ +N++S +IA+ARI YGG+G + + + PL
Sbjct: 166 RLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL 220
>gi|85712257|ref|ZP_01043308.1| Flagellar basal body L-ring protein [Idiomarina baltica OS145]
gi|85693884|gb|EAQ31831.1| Flagellar basal body L-ring protein [Idiomarina baltica OS145]
Length = 224
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + L C S + + P +P+ + ++ +
Sbjct: 1 MRLIIMAGVL-VTLAACSSNQPAPMPNDPYYAPVLPE--------------ERAEPVVPT 45
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL++ ++ ++ D +A +GDI+TV ++ A ++ +++ +
Sbjct: 46 GSLYQAQYSDNMYSDIKARRLGDIITVTLQERTTASKSANAQTTKESNVDLPVPTILGQA 105
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ N G +G + ++ +L+ I V L NGNLI+ G + +R+N
Sbjct: 106 ATINGN-PISANLGGTRDFTGDATADQSNRLSGEITVTVIRTLANGNLIVRGEKWLRINT 164
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-NLSP 237
+ +TGI+RPQDV A N++ ++A ARI Y G G + + P
Sbjct: 165 GDEYIRLTGIIRPQDVSADNTIPSTRVANARIEYSGTGSLASTQEQGWLTRFFNSSYWP 223
>gi|332140549|ref|YP_004426287.1| flagellar basal body L-ring protein [Alteromonas macleodii str.
'Deep ecotype']
gi|226701911|sp|B4RV30|FLGH_ALTMD RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|327550571|gb|AEA97289.1| flagellar basal body L-ring protein [Alteromonas macleodii str.
'Deep ecotype']
Length = 226
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 92/239 (38%), Gaps = 18/239 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEI--TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +L GC S+ P +P+ ++ +
Sbjct: 2 RILGLSAALLILGGCASTNEPPVQANDPSFAPVVPDY--------------PRETVVEDG 47
Query: 62 SLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+R L+ D A VGDI+TV + + QA T +++ +++ G +
Sbjct: 48 SLFRSQLANNLYSDVTARRVGDIITVTLSENTQASKSADTSTAKDTNVNLNPITGLAGQA 107
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ L SG + +++ L I+ V +L N NL+I G + + +N
Sbjct: 108 INIGGESIQLGVSSSRDFSGDAAANQSNSLIGAISVTVVDVLPNSNLVIRGEKWLTLNQG 167
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ +TGI+RP D+ N + K+A ARI Y G G + ++ PL
Sbjct: 168 DEYIRLTGIIRPADISPENEIVSTKVANARIQYSGTGSFARAQEKGWLTKFFDSTWWPL 226
>gi|254486395|ref|ZP_05099600.1| flagellar L-ring protein FlgH [Roseobacter sp. GAI101]
gi|214043264|gb|EEB83902.1| flagellar L-ring protein FlgH [Roseobacter sp. GAI101]
Length = 242
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L ++ C + P S S + N +
Sbjct: 1 MKKVMLSLTIAAFSAACA-RTDHMGSTPTFSEPMQSAEHNAMVYEALPIRLAPVRLVDRS 59
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW + +L D RA+ GDI+TV I I++ A NQT RSR+ S + + +
Sbjct: 60 SLWSGTRNSLLGDRRAMQRGDIMTVVIEINENAEISNQTDRSRSGSESLSVPNLLGIPQR 119
Query: 122 QTPQMNGNLNYDG------GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
++ + SSG GS+ R E L L +AA V +L NG L ISG+QE+
Sbjct: 120 LDEKLPDGASSADLVGLSSSSNSSGNGSVKRKENLTLRVAATVVDVLPNGVLSISGTQEL 179
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
RVN E+R L VTG VR +D+ N ++YDKIA AR+SYGG+G+ +++ +P IG Q+++ +
Sbjct: 180 RVNFELRELLVTGFVRSEDISRQNEITYDKIASARVSYGGRGQISDMQQPRIGQQVLDAV 239
Query: 236 SP 237
P
Sbjct: 240 LP 241
>gi|127512282|ref|YP_001093479.1| flagellar basal body L-ring protein [Shewanella loihica PV-4]
gi|126637577|gb|ABO23220.1| flagellar L-ring protein [Shewanella loihica PV-4]
Length = 234
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 21/243 (8%)
Query: 1 MYRYSFI---VLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M ++ VL + L GC ++ I P +P+
Sbjct: 6 MAKFVMAKSSVLVVALALVGCASTNQKPIADDPYYAPVYPE--------------APPTK 51
Query: 57 TKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ S+++DS A +L+ D +AL VGDI+TV ++ +A + + L
Sbjct: 52 IAATGSMYQDSQASSLYSDIKALKVGDIITVILQESTKAKKSANNELKKGSDLTLD-PIY 110
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L Y + + ++ L+ I+A V +L NGNL+I G + +
Sbjct: 111 AGGGNVTISGSPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWI 170
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN- 234
+N+ + +TGIVR QD+ N++ ++A ARI Y G G + + Q +
Sbjct: 171 TINNGDEFVRLTGIVRSQDIRPDNTIDSQRVANARIQYSGTGTFADAQKVGWLSQFFMSD 230
Query: 235 LSP 237
P
Sbjct: 231 WWP 233
>gi|312884831|ref|ZP_07744523.1| flagellar basal body L-ring protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367483|gb|EFP95043.1| flagellar basal body L-ring protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 223
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ GC + P + S K
Sbjct: 1 MTCLRVASILLTLIITGCAGRSEFVPPSPD------------EDKYAPPPLDYSLPKAKH 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R ++ ALF+D RA VGD+LTV + + ++ T +++++ +
Sbjct: 49 GSLYRHNYSMALFQDRRAYRVGDMLTVMLAEETESTKKANTKYGKSSNVGFGIPSLGG-- 106
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ D G + S+ KL I V +L NG L ISG + +R+N
Sbjct: 107 ---NTIDELEASVDAKRGFDGSATSSQKNKLEGSITVTVHEVLPNGVLRISGEKWLRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG+VR D+ +N V +I +ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGMVRVDDISRNNQVFSSRIGDARITYAGRGAVADSNASGWLSQFFNSPW 220
>gi|91792667|ref|YP_562318.1| flagellar basal body L-ring protein [Shewanella denitrificans
OS217]
gi|91714669|gb|ABE54595.1| flagellar L-ring protein [Shewanella denitrificans OS217]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 17/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +Y L SLL C S +P D+ P + T +
Sbjct: 1 MNKYIM--LLMVSLLSACSS-----------TPRKPIPDDPFYAPVYP--DAPATQTAAT 45
Query: 61 YSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ DS A+ L+ D RA +GDI+TV + QA + + +
Sbjct: 46 GSIFLDSQASSLYSDIRAHKIGDIITVVLMESTQAKKSATNDIKKGSDMSMD-PLFAGGG 104
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ +L Y + + ++ L I+A V +L NGNL+I G + + +N+
Sbjct: 105 NVTIKGVPLDLKYKDAYNTKRESDADQSNSLAGSISANVMQVLSNGNLVIRGEKWISINN 164
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ VTGIVR QD+ N++ ++A ARI Y G G + + Q
Sbjct: 165 GDEFIRVTGIVRSQDIKPDNTIESVRVANARIQYSGTGTFADAQKVGWLGQFFLGEW 221
>gi|116049012|ref|YP_792186.1| flagellar basal body L-ring protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313106038|ref|ZP_07792297.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
39016]
gi|122258120|sp|Q02IQ0|FLGH_PSEAB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|115584233|gb|ABJ10248.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310878799|gb|EFQ37393.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
39016]
Length = 231
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + L ++ L GC S P +P+ + +
Sbjct: 1 MNRLMIVSLLGIATALGGCVS-PPPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ L+ D +A VGDI+T+ + QA + +++ L+ F
Sbjct: 46 NGAIYQAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + Y G + G ++ L I V +L NG L + G +
Sbjct: 106 GMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGNELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGAFADASQPGWLDRFFL 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|258622491|ref|ZP_05717513.1| Flagellar L-ring protein precursor [Vibrio mimicus VM573]
gi|258625231|ref|ZP_05720143.1| Flagellar L-ring protein precursor [Vibrio mimicus VM603]
gi|262173357|ref|ZP_06041034.1| flagellar L-ring protein FlgH [Vibrio mimicus MB-451]
gi|258582478|gb|EEW07315.1| Flagellar L-ring protein precursor [Vibrio mimicus VM603]
gi|258585191|gb|EEW09918.1| Flagellar L-ring protein precursor [Vibrio mimicus VM573]
gi|261890715|gb|EEY36702.1| flagellar L-ring protein FlgH [Vibrio mimicus MB-451]
Length = 225
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M LL GC P +E S KS
Sbjct: 1 MKWLIKSWAVAVVLLAGCAWRQE-------FVPPEPGTEEYA-----PPKLDYSLPEAKS 48
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGDILTV + + ++ T + + ++
Sbjct: 49 GSLYRHQYSMTLFQDRRAYRVGDILTVQLSEETESSKKAGTKYGKGTDTNLGIAA---PT 105
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ +L+ +G + G S S+ KL I V +L NG L ISG + + +N
Sbjct: 106 LGSEKLRDFSLSLEGERSFDGNASSSQGNKLQGAITVTVREVLPNGVLRISGEKWLSLNQ 165
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +I +ARI+Y G+G + P Q +
Sbjct: 166 GDEFIRLTGIVRVDDISRNNQVSSLRIGDARITYAGRGVLADSNTPGWLTQFFNSPW 222
>gi|251789171|ref|YP_003003892.1| flagellar basal body L-ring protein [Dickeya zeae Ech1591]
gi|247537792|gb|ACT06413.1| flagellar L-ring protein [Dickeya zeae Ech1591]
Length = 239
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 10/235 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R + L GC + P + + S ++
Sbjct: 14 RLRLLAYVMMLTLSGCAYVPHDKV----------VTGATTAQPAPPLQAIPNGSIFQTGQ 63
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ +F+D R NVGD LT+ ++ + A ++ SR+ S ++ L
Sbjct: 64 AMNYGYQPMFEDRRPRNVGDTLTIVLQENVSASKNSSANASRDASGSFGMTATPRLLEGP 123
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
N G +GKG + I V +L NGNL + G +++ VN
Sbjct: 124 LGNNRAAFNATGKDDFTGKGGANANNTFTGTITVTVDQVLTNGNLHVVGEKQIAVNQGTE 183
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V ++A+AR+ Y G G E + N+SP
Sbjct: 184 FIRFSGVVNPRTISGSNTVPSTQVADARMEYVGNGYINEAQTMGWLQRFFLNVSP 238
>gi|260767926|ref|ZP_05876860.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
gi|260615956|gb|EEX41141.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
Length = 223
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + S + L +L GC +P ++ S +S
Sbjct: 1 MAKLSKVGLLSVLILAGCAGRDE-------FTPPSPDEEKYG-----PPTLDYSLPAAQS 48
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R +A LF+D RA VGD+LTV + + Q+ T + +S+
Sbjct: 49 GSLYRHQYAMTLFQDRRAYRVGDVLTVLLAEETQSKKSADTQYGKTSSVGLSAPVVGGKT 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + DG + G S S+ KL I V+ +L NG + I G + +R+N
Sbjct: 109 VDKLA-----ASIDGDRSFDGSASSSQGNKLEGAITVTVSEVLPNGVIRIRGEKWIRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ +N VS +I +ARI+Y G+G + Q +
Sbjct: 164 GDEFIRLTGIVRVDDISRNNQVSSQRIGDARITYSGRGALADSNASGWLTQFFNSPW 220
>gi|114570499|ref|YP_757179.1| flagellar L-ring protein [Maricaulis maris MCS10]
gi|123026895|sp|Q0AN96|FLGH_MARMM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|114340961|gb|ABI66241.1| flagellar L-ring protein [Maricaulis maris MCS10]
Length = 251
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 11/230 (4%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK-------KSYSLWRDSHAAL 71
+S + P M+P+ + D P + + SLW +
Sbjct: 21 SDRLSYVGQTPPMTPIQNPADLAGTGPSQLPMPMPRMPQQRYATNSTANNSLWTANSPTF 80
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN-- 129
F D RA VGDI+TV+I I D A +N T RSR+++ L+ N +
Sbjct: 81 FGDPRADQVGDIVTVNIAISDSAQLNNTTNRSRSSAEDSDLTSFLGADLTGFFNDNIDPT 140
Query: 130 --LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+ + +G GS++R E ++L +AA+VT +L NGNL+I+G QEVRVN+E+R L +T
Sbjct: 141 SMTSLGSTSSLAGSGSVNRTESISLTVAALVTQVLPNGNLVIAGRQEVRVNNEVRELLIT 200
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
GI RPQD+ + N++++ +IAEARISYGG+G ++ RP G +L + L P
Sbjct: 201 GIARPQDIGSDNTIAHTQIAEARISYGGRGHLSDAQRPRYGQELYDILMP 250
>gi|149189839|ref|ZP_01868119.1| flagellar L-ring protein precursor [Vibrio shilonii AK1]
gi|148836325|gb|EDL53282.1| flagellar L-ring protein precursor [Vibrio shilonii AK1]
Length = 224
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ V+ +L GC + P+ P E + + + + SL+
Sbjct: 6 RWGVVIGLLVLTGCAAR-------PEFVP-----PEPDEQKYAPPELNYALPQATGGSLY 53
Query: 65 RDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
R + LF+D RA VGD+LT+ + + Q+ T + + + +
Sbjct: 54 RHQYNLTLFQDRRAYRVGDVLTILLVEETQSSKKADTKFGKTSKVDFGAATVGG-----N 108
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ +G A G + S+ KL I V ++ NG L ISG + +R+N
Sbjct: 109 TFDETAVGLNGSRAFDGSAASSQGNKLEGAITVTVHEVMPNGVLKISGEKWIRLNQGDEF 168
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ VTGI+R DVD +N V +I +ARI+Y G+G + Q +
Sbjct: 169 IRVTGIIRADDVDRYNQVFSHRIGDARITYSGRGALADSNSAGWLTQFFTSPW 221
>gi|15596280|ref|NP_249774.1| flagellar basal body L-ring protein [Pseudomonas aeruginosa PAO1]
gi|107100528|ref|ZP_01364446.1| hypothetical protein PaerPA_01001553 [Pseudomonas aeruginosa PACS2]
gi|218892953|ref|YP_002441822.1| flagellar basal body L-ring protein [Pseudomonas aeruginosa LESB58]
gi|254234219|ref|ZP_04927542.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
C3719]
gi|254239441|ref|ZP_04932763.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
2192]
gi|296390553|ref|ZP_06880028.1| flagellar basal body L-ring protein [Pseudomonas aeruginosa PAb1]
gi|14548041|sp|Q9I4P6|FLGH_PSEAE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701927|sp|B7UXA6|FLGH_PSEA8 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|9946999|gb|AAG04472.1|AE004539_14 flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
PAO1]
gi|126166150|gb|EAZ51661.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
C3719]
gi|126192819|gb|EAZ56882.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
2192]
gi|218773181|emb|CAW28993.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
LESB58]
Length = 231
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + L ++ L GC + P +P+ + +
Sbjct: 1 MNRLMIVSLLGIATALGGCV-NPPPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ L+ D +A VGDI+T+ + QA + +++ L+ F
Sbjct: 46 NGAIYQAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + Y G + G ++ L I V +L NG L + G +
Sbjct: 106 GMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGNELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGAFADASQPGWLDRFFL 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|49082006|gb|AAT50403.1| PA1083 [synthetic construct]
Length = 232
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + L ++ L GC + P +P+ + +
Sbjct: 1 MNRLMIVSLLGIATALGGCV-NPPPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ L+ D +A VGDI+T+ + QA + +++ L+ F
Sbjct: 46 NGAIYQAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + Y G + G ++ L I V +L NG L + G +
Sbjct: 106 GMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGNELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGAFADASQPGWLDRFFL 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|152984579|ref|YP_001349647.1| flagellar basal body L-ring protein [Pseudomonas aeruginosa PA7]
gi|166214823|sp|A6V9B2|FLGH_PSEA7 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|150959737|gb|ABR81762.1| flagellar L-ring protein precursor FlgH [Pseudomonas aeruginosa
PA7]
Length = 231
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 96/245 (39%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + L +++L GC + P +P+ + +
Sbjct: 1 MNRLMIVSLLGIATVLGGCV-NPPPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ L+ D +A VGDI+T+ + QA + +++ L+ F
Sbjct: 46 NGAIYQAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + Y G + G ++ L I V +L NG L + G +
Sbjct: 106 GMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGNELVRIAGLVRADDIATDNTVPSTRVADARITYSGTGAFADASQPGWLDRFFL 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|88704303|ref|ZP_01102017.1| flagellar L-ring protein FlgH [Congregibacter litoralis KT71]
gi|88701354|gb|EAQ98459.1| flagellar L-ring protein FlgH [Congregibacter litoralis KT71]
Length = 229
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 16/240 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ + L C S+ P+ + + +
Sbjct: 1 MDKLRILLCVPLASLVACAGVESD--SPPEYVKIEPIEYPEVVVSTAP----------TT 48
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ D+ LF+D RA +GDI++V + A T S++NS+ F
Sbjct: 49 GSLYADNRSMFLFEDVRAHEIGDIVSVVLVESTSATKSADTDVSKDNSVSIVDPTIFGAP 108
Query: 120 GQ-QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ N A +GS +++ +LN IA V+ +L NGNL I G + +++N
Sbjct: 109 VTINNGRYNLGTELSSSSAFESEGSSNQSNRLNGSIAVQVSRVLPNGNLEIQGEKWIKIN 168
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ + GIVRP+D+ N++ +A+ARISYGG G E P + SPL
Sbjct: 169 QGDEYIRLRGIVRPEDLSPTNTIPSTLVADARISYGGTGILNESNTPGWLTRFFM--SPL 226
>gi|218528670|ref|YP_002419486.1| flagellar L-ring protein [Methylobacterium chloromethanicum CM4]
gi|218520973|gb|ACK81558.1| flagellar L-ring protein [Methylobacterium chloromethanicum CM4]
Length = 235
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 90/222 (40%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
C S + + P ++P+G+ L+ L F +S W + AAL++D
Sbjct: 16 GACQSDLDRLGRPPLLTPIGTGLNAP--REPLPTSFGALGPRHSYHSTWSPASAALYQDP 73
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG 135
RA +VGD++TV I I+D+A FDN + R R+ G+ + G + + G
Sbjct: 74 RARDVGDVITVSIAINDKAQFDNASERGRSQKSSLGFDFGYGISGLKD-TATADTGIRSG 132
Query: 136 GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDV 195
+ G+GSI R E L+L +AA+VT +L NGN++ISGSQEVRVN+E+R L V GIVRP+D+
Sbjct: 133 TETKGQGSIDRKESLSLSVAAVVTEVLPNGNVLISGSQEVRVNNEVRVLEVAGIVRPRDI 192
Query: 196 DAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N++ YDKIAEARISYGG+GR T++ P +G ++ E ++P
Sbjct: 193 SRKNTIDYDKIAEARISYGGRGRITDVQGPSLGQRVFETVAP 234
>gi|188025865|ref|ZP_02960113.2| hypothetical protein PROSTU_02020 [Providencia stuartii ATCC 25827]
gi|188020799|gb|EDU58839.1| hypothetical protein PROSTU_02020 [Providencia stuartii ATCC 25827]
Length = 255
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 10/232 (4%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+V+ GC + P + + +P + + +S
Sbjct: 33 VLVIALVLATSGCA----------YVKPRPLVDTQTSALPTAPTAPAPNGAIFQSAQPAY 82
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ LF+D R NVGDILT++++ + A ++ +R+ +
Sbjct: 83 YGYQPLFEDRRPRNVGDILTINLQENVSASKNSSANANRSGKTGFLAAILPGFMQGWLGG 142
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
N L+ G SGKG + I V +L NGNL + G + + +N S+
Sbjct: 143 SNTELDVKGSSDFSGKGGANANNTFRGTITVTVDQLLANGNLHVVGEKRIAINQGTESIR 202
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + A N+VS ++A+ARI Y G G E + N+SP
Sbjct: 203 FSGVVNPRTIGADNNVSSTQVADARIEYVGDGYINESQTMGWLQRFFLNVSP 254
>gi|295688782|ref|YP_003592475.1| flagellar L-ring protein [Caulobacter segnis ATCC 21756]
gi|295430685|gb|ADG09857.1| flagellar L-ring protein [Caulobacter segnis ATCC 21756]
Length = 244
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 122/225 (54%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
S++ E P+++P+G + + + SLWR A F D RA
Sbjct: 19 CSTVKEAVKGPELAPVGYPAALAPIQQQYVSAREPAPQAASANSLWRVGARAFFNDQRAS 78
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN------LNY 132
VGDILTV I IDD A NQT SR ++ + L + G L
Sbjct: 79 RVGDILTVMIDIDDSADTKNQTDSSRASTTKAGVPHLLGLESSLGKVLPGGFDPSNALET 138
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
++G G+I R+EK++L IAA+V+ +L NGN++I G+QEVR N E+R L V GIVRP
Sbjct: 139 SSTTTNAGAGNIKRSEKISLTIAAVVSQVLPNGNMVIQGTQEVRTNAELRQLTVAGIVRP 198
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ + N++ + +IAEARISYGG+G + + + P G L+E SP
Sbjct: 199 EDISSANTIRHTQIAEARISYGGRGDISRVQKTPAGQSLVERFSP 243
>gi|119477950|ref|ZP_01618050.1| flagellar L-ring protein FlgH [marine gamma proteobacterium
HTCC2143]
gi|119448863|gb|EAW30105.1| flagellar L-ring protein FlgH [marine gamma proteobacterium
HTCC2143]
Length = 236
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 18/238 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+R F+V+ S L C + P +P+ S
Sbjct: 14 FRMIFLVVSIGS-LTACTIGPDAMPNDPAYAPVYP--------------LSAEIPMANSG 58
Query: 62 SLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
++R + A LF+D +A VGDI++V + Q+ T + NS+ +
Sbjct: 59 GIYRPGYSAGLFEDLKARRVGDIISVILSERTQSSKTADTEIKKENSVSFDAGTVLGVSP 118
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
N + G+ ++ L+ IA + IL NG +++ G + + +N
Sbjct: 119 S-LGDYNMQTSVTQDRELKGEAGSDQSNSLSGSIAVTIAEILPNGLMMVRGEKWMTLNRG 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + G++RP+DV N++ ++A+ARI+Y G G + G + + P
Sbjct: 178 EEFIRIQGLIRPEDVQPDNTILSTRLADARITYSGTGDLANANKQGWGARFFNSEYWP 235
>gi|146278641|ref|YP_001168800.1| flagellar basal body L-ring protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556882|gb|ABP71495.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17025]
Length = 239
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 115/225 (51%), Gaps = 6/225 (2%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
++E+ P SP + + + + SLW A+L D RA
Sbjct: 14 CGRLAEVGKAPSFSPADETFQYHAMYALPIPESLGNSGPTAGSSLWAGDRASLLGDRRAS 73
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG--- 135
GDILTV I IDD+A N TGRSR+ L F + + + + +
Sbjct: 74 RRGDILTVAIEIDDRAEISNSTGRSRSGGESLGLPSFFGIPQRIDRHLPDGASMEDAVST 133
Query: 136 ---GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
+ SG GS+ R EKL L +AA V L NG L I G QEVRVN E+R L VTG VRP
Sbjct: 134 SSSSSYSGDGSVRRKEKLTLRVAATVVEELPNGVLRIQGQQEVRVNYELRELVVTGYVRP 193
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
D+ N ++YDKIAEARISYGG+G+ T++ +P G Q+ + + P
Sbjct: 194 GDISRQNEITYDKIAEARISYGGRGQITDVQQPRYGQQVADIILP 238
>gi|121602817|ref|YP_989396.1| flagellar basal body L-ring protein [Bartonella bacilliformis
KC583]
gi|166214815|sp|A1UTU3|FLGH_BARBK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|120614994|gb|ABM45595.1| flagellar L-ring protein FlgH [Bartonella bacilliformis KC583]
Length = 230
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 137/236 (58%), Gaps = 7/236 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
F ++ S ++ C + + +P SP+ + L P + +Y
Sbjct: 1 MYLVFGIIFTSVIVTSCSYNTKDFNSVPDFSPVRADL---GYAPSRTAQTYPLPPRESNY 57
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+R S + F+D RA+ GD+LTV I I+D+A +N++ ++S + G+S
Sbjct: 58 SLYRASGNSFFRDPRAMQPGDVLTVQISINDRASLNNKSDLKSDSSSKYTIGTGYSFMD- 116
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
++ G+L + S G G I R E + L +AAIVT +L NGNLII GSQEVRVN E+
Sbjct: 117 ---RIAGSLEGESSNQSKGDGKIERQENIRLSVAAIVTDVLPNGNLIIRGSQEVRVNHEL 173
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R LN+ G+VRP+D+ +N + YDKIAEARISYGG+GR +E+ +PP G QL+ +SP
Sbjct: 174 RILNIAGVVRPRDISGNNMIEYDKIAEARISYGGRGRISEIQQPPYGQQLLNQISP 229
>gi|149375031|ref|ZP_01892804.1| Flagellar basal body L-ring protein [Marinobacter algicola DG893]
gi|149360920|gb|EDM49371.1| Flagellar basal body L-ring protein [Marinobacter algicola DG893]
Length = 235
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 5 SFIVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+F ++ +L GC S I PQ +P+ + +S +
Sbjct: 17 TFALVAILVVLQGCTAMSRPRAIPDDPQYAPVRAE--------------AMMQRDPESGA 62
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+++ S +L+ D+ ALNVGDILTV + +A + ++ +++N +
Sbjct: 63 IYQSSRNYSLYGDTVALNVGDILTVTLEESTRASKNAESSITKDNEVSMLDPQILGK--- 119
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ +++ G+ ++ LN I VT +L NG L I G + + + +
Sbjct: 120 --GNIGLATDFNLERDFEGQAEADQSNSLNGNITVTVTEVLPNGVLHIRGEKWLSLTNGD 177
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
+ +TG+VRP+D+ N+V+ ++IA+ARI+YGG G + + + + PL
Sbjct: 178 EYIRLTGLVRPEDISPDNTVASNRIADARIAYGGTGDFDQANQMGWLARFFNSEWFPL 235
>gi|170722888|ref|YP_001750576.1| flagellar basal body L-ring protein [Pseudomonas putida W619]
gi|226701928|sp|B1JCC5|FLGH_PSEPW RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|169760891|gb|ACA74207.1| flagellar L-ring protein [Pseudomonas putida W619]
Length = 231
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 23/245 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R L + LL GC + ++ P +P+ +
Sbjct: 1 MNRLLSLFALGGAVLLAGCVAPTAK-PNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + + +++S + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIQKDSSANIGLTSLFGA 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ ++ Y G A+ G ++ L I V +L NG + + G +
Sbjct: 106 TPSTNNPFGSGDLSLEAGYSGERATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G++R D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGEELVRIAGLIRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFFL 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|259418147|ref|ZP_05742066.1| flagellar L-ring protein FlgH [Silicibacter sp. TrichCH4B]
gi|259347053|gb|EEW58867.1| flagellar L-ring protein FlgH [Silicibacter sp. TrichCH4B]
Length = 223
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 122/222 (54%), Gaps = 6/222 (2%)
Query: 22 ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVG 81
+ I P +P + + + + + SLW S A+L D RA G
Sbjct: 1 MDHIGKPPSFTPADETQEHVAMLYQGLPLTSQTQRAVDNASLWSGSRASLLGDRRATKKG 60
Query: 82 DILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN------LNYDGG 135
DILTV I I+++A N T RSRN+S ++ L + ++ ++
Sbjct: 61 DILTVVIEINEKASISNDTKRSRNSSESMQVPQLLGLPQRLDERLPDGASSADLIDLGSN 120
Query: 136 GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDV 195
+S G GS+SR+EKL L +AA V +L NG L ISGSQE+RVN E+R L V+G VRP D+
Sbjct: 121 SSSGGSGSVSRSEKLELRVAATVVDVLPNGVLAISGSQELRVNFELRELLVSGYVRPDDI 180
Query: 196 DAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N V+YDKIA AR+SYGG+G+ T++ +P G Q+++ + P
Sbjct: 181 SRQNEVTYDKIASARVSYGGRGQITDVQQPRYGQQVLDAVLP 222
>gi|271500069|ref|YP_003333094.1| flagellar L-ring protein [Dickeya dadantii Ech586]
gi|270343624|gb|ACZ76389.1| flagellar L-ring protein [Dickeya dadantii Ech586]
Length = 239
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 89/235 (37%), Gaps = 10/235 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R + L GC + P + + S ++
Sbjct: 14 RPRLLAYVMMLTLSGCAYVPHDKV----------VTGPTTAQPASPLQAIPNGSIFQTGQ 63
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ +F+D R NVGD LT+ ++ + A ++ SR+ S ++ L
Sbjct: 64 AMNYGYQPMFEDRRPRNVGDTLTIVLQENVSASKNSSANASRDASSSFGMTTTPRLLEGP 123
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
L+ G A +GKG + I V +L NGNL + G +++ VN
Sbjct: 124 LGNNRAALDATGKDAFTGKGGANANNTFTGTITVTVDQVLTNGNLHVVGEKQIAVNQGTE 183
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V ++A+AR+ Y G G E + N+SP
Sbjct: 184 FIRFSGVVNPRTISGSNTVPSTQVADARMEYVGNGYINETQTMGWLQRFFLNVSP 238
>gi|126176153|ref|YP_001052302.1| flagellar basal body L-ring protein [Shewanella baltica OS155]
gi|304412505|ref|ZP_07394111.1| flagellar L-ring protein [Shewanella baltica OS183]
gi|307307164|ref|ZP_07586902.1| flagellar L-ring protein [Shewanella baltica BA175]
gi|125999358|gb|ABN63433.1| flagellar L-ring protein [Shewanella baltica OS155]
gi|304349147|gb|EFM13559.1| flagellar L-ring protein [Shewanella baltica OS183]
gi|306910403|gb|EFN40834.1| flagellar L-ring protein [Shewanella baltica BA175]
Length = 220
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 21/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R+ + +LL GC S I + P + + S K
Sbjct: 1 MRWLW--FLCFALLSGCMSHIPDKETKP------------GTKEWAPPEIDYSLPDAKDG 46
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+R LFKD RA GDILTV + + T ++ + L+G
Sbjct: 47 SLYRPGFMLTLFKDKRAFREGDILTVALDEKTYSSKKADTKTNKEQDMGMGLTGNIG--- 103
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ N + +G GS ++ +L+ I V+ +L NG L+I G + +R+N
Sbjct: 104 --SQSANADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQG 161
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
L + GI+R D+ +N++S +IA+ARI YGG+G + + + PL
Sbjct: 162 DEYLRLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL 220
>gi|145297457|ref|YP_001140298.1| lateral flagellar L-ring protein, LfgH [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142850229|gb|ABO88550.1| lateral flagellar L-ring protein, LfgH [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 223
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L LL GC + ++ ++ +
Sbjct: 1 MMKAMWRYLWVVLLLGGCATY--------ELKAPEPGDEKWAPSRPKLSVSARGED---- 48
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA +GDILTV + Q+ T S+N+S++
Sbjct: 49 GSLYRGDYMMTLFQDRRAYRIGDILTVVLEERTQSSKKANTSMSKNSSMNVPAPSIGGKV 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + G + S+ L I V ++ NG L I G + +R+N
Sbjct: 109 -----RSDWGASLSADRDFDGGATSSQQNTLAGSITVTVAEVMPNGVLGIRGEKWIRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ + G+VR +D+D N +S +IA+ARI+Y G+G + + + +
Sbjct: 164 GDEYIRLGGMVRVEDIDQSNRISSQRIADARITYAGRGALADSNQMGWLGRFFSSAF 220
>gi|302343759|ref|YP_003808288.1| flagellar L-ring protein [Desulfarculus baarsii DSM 2075]
gi|301640372|gb|ADK85694.1| flagellar L-ring protein [Desulfarculus baarsii DSM 2075]
Length = 227
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 17/240 (7%)
Query: 1 MYR--YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + + + + L GC SS + + +
Sbjct: 1 MTKTTLTIAAVAMALCLAGCASS--------------PGQFQPSLPAAPKPTIDITHPKP 46
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SL+ + + +F D RA NVGDI+ V+I + +A N T R + +S
Sbjct: 47 TAGSLFVATRSDMFTDLRARNVGDIIVVEIVENSKAAKKNDTKAERKSDYDIGVSSFMGY 106
Query: 119 FGQQTPQMNGNL-NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
L + S K +++ + + I V +L NGN+I+ GS+E++V
Sbjct: 107 EQDLPGSDPSKLIGANFNSKSDAKAQLTKEDTMTSSIGCTVVEVLNNGNMIVKGSRELQV 166
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E + + + G VRPQDV + N+V ++A+A I Y G+G T+ P +L++ + P
Sbjct: 167 NGETQYIVLQGTVRPQDVTSENTVYSTQLADATIHYTGRGVLTDKQTPGWLARLLDQVWP 226
>gi|74101661|gb|AAZ99751.1| FlgHL [Aeromonas hydrophila]
Length = 223
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L LL GC + ++ ++ +
Sbjct: 1 MMKAMWRYLWVVLLLGGCATY--------ELKAPEPGDEKWAPSRPKLSVSARGED---- 48
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA +GDILTV + Q+ T S+N+S++
Sbjct: 49 GSLYRGDYMMTLFQDRRAYRIGDILTVVLEERTQSSKKANTSMSKNSSMNVPAPSIGGKV 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + G + S+ L I V ++ NG L I G + +R+N
Sbjct: 109 -----RSDWGASLSADRDFDGGATSSQQNTLAGSITVTVAEVMPNGVLGIRGEKWIRLNQ 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ + G+VR +D+D N +S +IA+ARI+Y G+G + + + +
Sbjct: 164 GDEYIRLGGMVRVEDIDQSNRISSQRIADARITYAGRGALADTNQMGWLGRFFSSAF 220
>gi|260574399|ref|ZP_05842403.1| flagellar L-ring protein [Rhodobacter sp. SW2]
gi|259023295|gb|EEW26587.1| flagellar L-ring protein [Rhodobacter sp. SW2]
Length = 239
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 122/229 (53%), Gaps = 7/229 (3%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
+ C + ++ P SP+ S N + D+ + SLW A+LF D
Sbjct: 11 VAAC-GRLDQVGRAPAFSPLEGSYQHNAMYSNPIPESTEPDAASDASSLWTGGRASLFGD 69
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN----- 129
RA GDILTV I IDD+A N + RSR++S + + + + +
Sbjct: 70 RRAGRRGDILTVVIEIDDKAEISNSSDRSRSSSENMGIPSLLGIPQRLNSALPAGASMAD 129
Query: 130 -LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
++ G + G GS++R EKL L +AA V L NG L I G QEVRVN E+R L VTG
Sbjct: 130 AVSATGSSSFQGDGSVARKEKLTLRVAATVVEELPNGVLRIEGQQEVRVNFELRELIVTG 189
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VRP D+ N ++YDKIA ARISYGG+G+ T++ +P +G Q+ + L P
Sbjct: 190 YVRPVDISRQNEITYDKIAGARISYGGRGQITDVQQPRLGQQVADILLP 238
>gi|304310888|ref|YP_003810486.1| Flagellar L-ring protein precursor [gamma proteobacterium HdN1]
gi|301796621|emb|CBL44833.1| Flagellar L-ring protein precursor [gamma proteobacterium HdN1]
Length = 237
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 24/243 (9%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ ++L GC S + + P+ +P+ + + + S++
Sbjct: 10 LVSLFFAVAILSGCASQMPK-PDDPRYAPVFPQAPQTD--------------ISNTGSIY 54
Query: 65 -RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+L++D RA VGDILTV ++ + + T S+++S + +++ L +
Sbjct: 55 GNSMGVSLYEDQRARRVGDILTVMLQERTSSSKTSGTDMSKDDSNNMQVNSILGLTPKTN 114
Query: 124 -------PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ N + D G ++ +L I VT ++ NG L + G + +
Sbjct: 115 LPLGLSKSDLSLNSDTDSKRKFKGAAKSDQSNQLQGNITVTVTQVMPNGILYVRGEKWIT 174
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-L 235
+ + + + G+VR D++ N+V KIA+ARI+YG G ++ + + + +
Sbjct: 175 LAEGDEYIRIHGLVRTADINPDNTVQSSKIADARIAYGATGDFADVNQKGWLSRFFSSKM 234
Query: 236 SPL 238
PL
Sbjct: 235 WPL 237
>gi|292492366|ref|YP_003527805.1| flagellar L-ring protein [Nitrosococcus halophilus Nc4]
gi|291580961|gb|ADE15418.1| flagellar L-ring protein [Nitrosococcus halophilus Nc4]
Length = 265
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 28/247 (11%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ I + +L+ GC + + P + + +
Sbjct: 34 KNIIISVVGIALITGCAAQAPK--PDPNFAATRPGATPP--------------PQHHNGA 77
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS---- 117
++ + +LF D RA GD+LT+ + A ++ T + S
Sbjct: 78 IYHAGYEISLFTDYRARQAGDVLTIVLEERTDAEKESDTAIDKETSYSLTNPTLLGSAVQ 137
Query: 118 ------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+ + GA SG G S+ +L+ I V +L NGNLI+ G
Sbjct: 138 FDTPKWFPLASNKNNSLEMAAAVEGAFSGSGDSSQNNRLDGHITVTVAEVLPNGNLIVQG 197
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ- 230
+ + +N L ++GIV P+D+ N+VS ++A+ R++Y G G T + R +
Sbjct: 198 EKVITINQGNEYLRISGIVSPRDIQPDNTVSSLRLADVRLAYVGDGATQDANRMGWLTRL 257
Query: 231 LIENLSP 237
P
Sbjct: 258 FFSKFMP 264
>gi|117617995|ref|YP_857340.1| flagellar basal body L-ring protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559402|gb|ABK36350.1| flagellar L-ring protein FlgH [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 223
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 20/240 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ +++ + L GC S+ + P+ +P+ + + P +
Sbjct: 1 MKAIWMLGLLA--LGGCSSTPNTAKPDDPEFAPVYGESEPVSVRP--------------T 44
Query: 61 YSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ D ++ D +A VGDI+T+++ A T ++N + +
Sbjct: 45 GAIFQPDQVNGIYSDIKAHKVGDIITIELAESTSASKKANTQSGKDNKFTMNPAVLGGVP 104
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
P + + + GA G+ ++ L I+ V +L NGNL++ G + + +N+
Sbjct: 105 VTAGP-YDLSASLSQNGAFKGQAKADQSNSLQGNISVSVAKVLPNGNLLVRGEKWIMLNN 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ +TG++RP+DV NSVS K+A ARI YGG G PL
Sbjct: 164 GNEYIRITGMIRPEDVTTDNSVSSQKVANARIHYGGTGDLANTQEQGWLTSFFNGPWWPL 223
>gi|146307866|ref|YP_001188331.1| flagellar basal body L-ring protein [Pseudomonas mendocina ymp]
gi|145576067|gb|ABP85599.1| flagellar L-ring protein [Pseudomonas mendocina ymp]
Length = 240
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 32/254 (12%)
Query: 1 MYRYSFIVLCYSSLL--FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R F + LL GC + ++ P +P+ + +
Sbjct: 1 MNRQVFCFPLLAGLLLSTGCVAPTAK-PDDPYYAPVLP--------------RTPLPAAQ 45
Query: 59 KSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S+++ L+ D +A VGDI+T+ + QA + + +++S F
Sbjct: 46 NNGSIYQAGFENGLYDDRKAFRVGDIITITLNERTQASKNANSNIQKDSSGAIGAPNLFG 105
Query: 118 L-------------FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ G P ++ N++ +SG G ++ L+ I V +L N
Sbjct: 106 MAVTPDNPLRSLGALGMNNPNLSLEANWNAQREASGSGQAGQSNSLSGSITVTVAEVLPN 165
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L + G + + +N + ++G+VR D+ N+V+ ++A+ARI+Y G G + +
Sbjct: 166 GILAVRGEKWMTLNTGDELVRISGLVRADDISTDNTVASTRVADARITYSGTGAFADASQ 225
Query: 225 PPIGHQLIEN-LSP 237
P + + + P
Sbjct: 226 PGWLSRFFLSPMWP 239
>gi|308050021|ref|YP_003913587.1| flagellar L-ring protein [Ferrimonas balearica DSM 9799]
gi|307632211|gb|ADN76513.1| flagellar L-ring protein [Ferrimonas balearica DSM 9799]
Length = 232
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L +L GC ++ + + + + S T SL+R
Sbjct: 16 IALLSLMVLNGCSTT------------YIPEPVQPDAPEYAPPALEFSLPTPAHGSLYRK 63
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ AL++D RA VGDILTVD+ QA T S+++SL G +G +
Sbjct: 64 GYNLALYQDRRAYRVGDILTVDLEEKTQASKKADTSTSKDSSL-----QGSGSYGFGSST 118
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+G GG SG GS S+ +L I V+ +L NG L+I G + +R+N +
Sbjct: 119 GSGQAQLGGGRDFSGNGSSSQQNQLTGAITVTVSGVLPNGVLVIRGEKWLRLNQGDEYIR 178
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSP 237
+ G+VRP+DVD N +S +IA+ARISYGG+G ++ P G + + + P
Sbjct: 179 LVGLVRPEDVDQANRISSQRIADARISYGGRGTLADVNAPGWGMRFFNDPIFP 231
>gi|189426328|ref|YP_001953505.1| flagellar L-ring protein [Geobacter lovleyi SZ]
gi|226701925|sp|B3EAV2|FLGH_GEOLS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|189422587|gb|ACD96985.1| flagellar L-ring protein [Geobacter lovleyi SZ]
Length = 224
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 23/241 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + L LL GC +E+ P K+ +
Sbjct: 1 MKWYLVALS-GLLLSGCVVQQTEVVS-----------------PSFDQQLKSPAPNYSNG 42
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF-- 119
S+W+ S L +D +A VGDI+T+ + A T R++ + + L
Sbjct: 43 SIWQASSIGLTEDGKARRVGDIVTIIVTETASASKQAATATGRSSQISAGIPNMLGLEES 102
Query: 120 ---GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ LN G GS SR E L+ I+A V +L N NL I G + VR
Sbjct: 103 KIITSNFADLSKLLNASASSKFDGSGSTSRKETLSATISAKVIDVLPNSNLKIEGRRNVR 162
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E + + V G +R +D+ A N+++ +A+A+ISY G+G ++ +P +++ L
Sbjct: 163 VNNEDQIVTVKGTIRQRDITAENTINSIYVADAQISYAGEGIISDRQKPGWLMNVLDKLW 222
Query: 237 P 237
P
Sbjct: 223 P 223
>gi|285018206|ref|YP_003375917.1| flagellar l-ring protein precursor (basal body l-ring protein)
[Xanthomonas albilineans GPE PC73]
gi|283473424|emb|CBA15929.1| probable flagellar l-ring protein precursor (basal body l-ring
protein) [Xanthomonas albilineans]
Length = 232
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
F S LL GC + + SPM + + + +++
Sbjct: 9 FSAALLSVLLGGCANLGVAAGDMRPYSPMAPIV-----------PVVAPQAQPSAGAIYA 57
Query: 66 DSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+L+ D RA +VGD+LT+ + A T S+ +S+
Sbjct: 58 AGPGLSLYSDRRARDVGDLLTITLVESTNASSTAGTSISKKDSVKMATPTLLGTPFTING 117
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
N + G + +GKG+ +++ + + V L NGNL+I G + +R+N +
Sbjct: 118 TDVLNNSTSGDRSFAGKGNTAQSNTMQGSLTVTVMQRLPNGNLVIQGDKNLRLNQGDELV 177
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N++ K+A+ARI+YGG+G + + + +SP
Sbjct: 178 QVQGIVRAADIAPDNTIPSSKVADARIAYGGRGAVAQSNAMGWLSRFFNSRISP 231
>gi|167034940|ref|YP_001670171.1| flagellar basal body L-ring protein [Pseudomonas putida GB-1]
gi|189044481|sp|B0KR09|FLGH_PSEPG RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166861428|gb|ABY99835.1| flagellar L-ring protein [Pseudomonas putida GB-1]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 24/245 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R L + LL GC + + P +P+ +
Sbjct: 1 MNRLLSVFALGGAVLLAGCVAPTPK-PNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + + +N+ L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNEKTSASKNAGSQIQKNSKADIGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ Y+G A+ G ++ L I V +L NG + + G +
Sbjct: 106 TPNTNNPFGGGDLSLEAGYNGERATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WLTLNTGEELVRIAGMVRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFF- 224
Query: 234 NLSPL 238
+SPL
Sbjct: 225 -ISPL 228
>gi|104782839|ref|YP_609337.1| flagellar basal body L-ring protein [Pseudomonas entomophila L48]
gi|122402466|sp|Q1I732|FLGH_PSEE4 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|95111826|emb|CAK16550.1| flagellar basal-body outer-membrane L ring protein [Pseudomonas
entomophila L48]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 95/245 (38%), Gaps = 25/245 (10%)
Query: 2 YRYSFIVLCY--SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++ V + LL GC + + P +P+ +
Sbjct: 1 MKHLLSVFALGGAVLLAGCVAPTPK-PNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ +L+ D +A VGDI+T+ + A + + +N+ L+ F
Sbjct: 46 NGSIYQAGFEQSLYTDRKAFRVGDIITITLNERTSASKNAGSQIQKNSKADIGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ Y G + G ++ L I V +L NG + + G +
Sbjct: 106 SPNTNNPFGGGDLSLEAGYSGDRTTKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGEELVRIAGLVRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFF- 224
Query: 234 NLSPL 238
+SPL
Sbjct: 225 -ISPL 228
>gi|163744351|ref|ZP_02151711.1| flagellar L-ring protein precursor H [Oceanibulbus indolifex
HEL-45]
gi|161381169|gb|EDQ05578.1| flagellar L-ring protein precursor H [Oceanibulbus indolifex
HEL-45]
Length = 256
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 16/250 (6%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPM-----GSSLDENNRMPFLGIDFKNSDST 57
R S ++ + L GC +S PQ SP+ ++P + +
Sbjct: 7 RPSVLMFGAALALTGCDTS-PHFDRDPQPSPIVVSGETIPEVARVQVPMPAVALEPPRRG 65
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SL+ ALF D RA ++GDI+TV I IDD+A N T R R + F
Sbjct: 66 SAKASLFSARSEALFADQRADDIGDIVTVVISIDDRAQLRNSTDREREGASSIGFPTFFG 125
Query: 118 LFGQQTPQMNGN----------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ + G + +SG G+ISR E++ L +AA+V L NG +
Sbjct: 126 YGAKIAAILPGISAADLPSGDVVEIGSASEASGSGAISRNERIELKVAALVIDKLPNGTV 185
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+++G QE+ VN E+R L + GIVRP D+ N++SYDKIAEARI+YGG+G +
Sbjct: 186 VVAGRQEIMVNQELRELRMAGIVRPADIRDDNTISYDKIAEARIAYGGRGTLSRAQERSY 245
Query: 228 GHQLIENLSP 237
G ++ + P
Sbjct: 246 GEDAMDVILP 255
>gi|197120121|ref|YP_002140548.1| flagellar L-ring lipoprotein FlgH [Geobacter bemidjiensis Bem]
gi|197089481|gb|ACH40752.1| flagellar L-ring lipoprotein FlgH [Geobacter bemidjiensis Bem]
Length = 230
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ P + S SLW+ S L +D +A GDI+TV I + A
Sbjct: 29 AEVQTPTFDQQIPAPQVSYASGSLWQASSTGLAEDMKARRRGDIITVVISENASASKKAS 88
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTP---QMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
TG SR +S+ + L ++ LN G GS SR E L I+A
Sbjct: 89 TGTSRGSSISAGIPKLLGLETTAIKNWADLSDLLNASFSSKFDGSGSTSRQETLQATISA 148
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V ++ NGNL+I G + V+VN+E + + +TG VR +DV A N++S IA+A+I+Y GK
Sbjct: 149 KVVDVIPNGNLLIEGRRNVKVNNEDQIIILTGTVRGRDVSADNTISSALIADAKIAYSGK 208
Query: 217 GRTTELLRPPIGHQLIENLSP 237
G ++ +P ++ + P
Sbjct: 209 GIISDRQKPGWLLNALDKIWP 229
>gi|254419064|ref|ZP_05032788.1| flagellar L-ring protein FlgH [Brevundimonas sp. BAL3]
gi|196185241|gb|EDX80217.1| flagellar L-ring protein FlgH [Brevundimonas sp. BAL3]
Length = 246
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 131/245 (53%), Gaps = 8/245 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSS--LDENNRMPFLGIDFKNSDSTK 58
M + + ++ G S+ E P+++P+G L + + +
Sbjct: 1 MRKILIVAAVSAAASLGACSTAIEAVRGPELAPIGYPAALVPAQQAYMADPSLRQEATPA 60
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ SLWR F D RA ++GDILTV I IDD+A N T R+R+N+ +S F L
Sbjct: 61 SANSLWRVGARTFFGDQRARHIGDILTVRIDIDDRAQTQNSTQRARSNTSANGVSNFFGL 120
Query: 119 FGQQTPQMNGNLNYDG------GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
G + ++G GS++R+EK++L +AA+VT +L NGNL+I G
Sbjct: 121 ESSLGRVFPGGFDPANMVGLEGKTNAAGSGSVNRSEKVSLTVAAVVTDVLANGNLVIQGR 180
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
QEVR N E+R L V GIVRP+D+ + NS+++ +IAEARISYGG+G + + P L+
Sbjct: 181 QEVRTNREVRELTVAGIVRPEDISSANSINHTQIAEARISYGGRGDISRMQATPAAQSLV 240
Query: 233 ENLSP 237
E SP
Sbjct: 241 ERFSP 245
>gi|300816781|ref|ZP_07097001.1| flagellar L-ring protein FlgH [Escherichia coli MS 107-1]
gi|300530555|gb|EFK51617.1| flagellar L-ring protein FlgH [Escherichia coli MS 107-1]
Length = 235
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSYANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + N + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFNGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|326796594|ref|YP_004314414.1| flagellar L-ring protein [Marinomonas mediterranea MMB-1]
gi|326547358|gb|ADZ92578.1| Flagellar L-ring protein [Marinomonas mediterranea MMB-1]
Length = 222
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 21/238 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY + + LL GC + + P +P+ + S
Sbjct: 1 MNRYRSFLFVFPILLAGCAAVDPAPKADDPFYTPVVQPTLQY--------------SKSA 46
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+++ F D +A +VGDILTV + + N S+++S +
Sbjct: 47 DGGIYQVGMGDVFFGDKKARSVGDILTVTLSESTSSTKSNAANLSKDSSATIGNPTILGV 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ SG +++ L I V + NG L I G + + +N
Sbjct: 107 PIGLDTTVP-----SVTSEFSGSADANQSNSLTGSITVTVYEVYPNGLLAIRGEKWITLN 161
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ ++G+VR +D+ A N+V +++A+ARI+Y G G + I +
Sbjct: 162 QGEEYIRLSGLVREEDIGADNTVQSNRLADARIAYSGTGELAAGSEQGWLTRFINSKW 219
>gi|253702430|ref|YP_003023619.1| flagellar L-ring protein [Geobacter sp. M21]
gi|251777280|gb|ACT19861.1| flagellar L-ring protein [Geobacter sp. M21]
Length = 229
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ P + S SLW+DS L +D +A GDI+TV I + A
Sbjct: 28 AEVQTPTFDQQIPAPQLSYASGSLWQDSSTGLAEDLKARRRGDIITVVISENASASKKAS 87
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQT---PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
TG SR +S+ + L ++ LN G G GS SR E L I+A
Sbjct: 88 TGTSRGSSISAGIPKLLGLETTGIRNWADLSDLLNASFGSKFDGSGSTSRQETLQATISA 147
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V ++ NGNL+I G + V+VN+E + + +TG VR +DV A N++S IA+ARI+Y GK
Sbjct: 148 KVVDVIPNGNLLIEGRRNVKVNNEDQIIVLTGTVRGRDVSADNTISSALIADARIAYSGK 207
Query: 217 GRTTELLRPPIGHQLIENLSP 237
G ++ +P ++ + P
Sbjct: 208 GIISDRQKPGWLLNTLDKIWP 228
>gi|51597634|ref|YP_071825.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis IP
32953]
gi|153949468|ref|YP_001399637.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis IP
31758]
gi|81638506|sp|Q666C4|FLGH2_YERPS RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|51590916|emb|CAH22572.1| putative flagellar L-ring protein [Yersinia pseudotuberculosis IP
32953]
gi|152960963|gb|ABS48424.1| flagellar L-ring protein FlgH [Yersinia pseudotuberculosis IP
31758]
Length = 221
Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ I+ L GC S P + + +++ + + +
Sbjct: 1 MKRFLILTPMVLALCGCES--------PALL-----VQKDDAEFAPPANLVQPATVTEGG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
L++ ++ +L +D RA +GDILTV + Q+ +T + N + +
Sbjct: 48 GLFQPAYNWSLLQDRRAYRIGDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKL 107
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G G + ++ L I V +L NG L+I G + + +N
Sbjct: 108 NKFGG-----SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ VTG+VR DV NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 DEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 221
>gi|114562345|ref|YP_749858.1| flagellar basal body L-ring protein [Shewanella frigidimarina NCIMB
400]
gi|122941034|sp|Q085P5|FLGH_SHEFN RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|114333638|gb|ABI71020.1| flagellar L-ring protein [Shewanella frigidimarina NCIMB 400]
Length = 224
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M +Y I L LL GC S+ I P +P+
Sbjct: 1 MIKY--IALASVVLLVGCSSTAKKPIADDPFYAPVYPDTVPTQ--------------VAA 44
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S++ DS A+ L+ D RA VGDI+TV ++ QA + + L +
Sbjct: 45 TGSIYLDSQASSLYSDIRAHRVGDIITVTLKESTQASKSANNEIKKGSDLSVE-PVYAGG 103
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ +L Y + + ++ L+ I+A + +L NGNL+I G + + +N
Sbjct: 104 KNISISGVPIDLGYSDSMNTKRESDADQSNSLDGSISANIIQVLSNGNLVIRGEKWISIN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ + VTG++R +D++ N++ ++A ARI Y G G + + +
Sbjct: 164 NGDEFIRVTGMIRSEDINPDNTIDSTRVANARIQYSGTGTFADSQKVGWLSSFFMSDW 221
>gi|261341491|ref|ZP_05969349.1| flagellar L-ring protein FlgH [Enterobacter cancerogenus ATCC
35316]
gi|288316287|gb|EFC55225.1| flagellar L-ring protein FlgH [Enterobacter cancerogenus ATCC
35316]
Length = 221
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ + LL GC S P + + +++ DF + +
Sbjct: 1 MKKQLVIGFVALLLAGCES--------PALL-----VHKDDAAFAPPEDFSLPPTQVQGG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
L+ ++ +L +D RA VGDILTV + QA +T + N + + F
Sbjct: 48 GLYNANYNWSLTQDRRAYRVGDILTVKLDESTQASKQARTNFGKKNDVSIGVPEAFG--- 104
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + DG +G + + L I V +L NG L I G + + +N
Sbjct: 105 --HSVDKLSGSIDGNRNFNGNATSQQQNSLRGAITVAVYKVLPNGVLAIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ VTG+VR +D++ NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 DEYMRVTGLVRAEDIERDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 221
>gi|94987185|ref|YP_595118.1| flagellar basal body L-ring protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731434|emb|CAJ54797.1| Flagellar basal body L-ring protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 230
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 20/243 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F C +L GC + P ++P + DS
Sbjct: 1 MKKLLFTSGCI-LILTGCSAPNKTPVVAPPITP-------------PPAYVEPEDSYSNP 46
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-- 117
SL+ + LF D+RA VGDI+ V I ++ A T + + + F
Sbjct: 47 GSLYSSAESDGLFADTRARRVGDIVMVKIVENNTAKNKADTTADKKTANTYGIDAFFGRQ 106
Query: 118 ---LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ P + + ++ G R +N IAA V ++ G L I G +E
Sbjct: 107 YIGGGSTKIPVGSVAFDTTSESGTTSTGETKREGAINGTIAARVLRVMPGGLLEIEGVRE 166
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
RVN+E + + +TG++RP D++ NS+ ++I++A+I+Y G+G +E +P + ++
Sbjct: 167 TRVNNETQYIVITGLIRPMDIEPDNSIMSNRISDAKIAYYGQGVLSEKQKPGWFTRFMDT 226
Query: 235 LSP 237
L P
Sbjct: 227 LWP 229
>gi|26991073|ref|NP_746498.1| flagellar basal body L-ring protein [Pseudomonas putida KT2440]
gi|31076681|sp|Q88ER9|FLGH_PSEPK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|24986107|gb|AAN69962.1|AE016634_11 flagellar L-ring protein precursor FlgH [Pseudomonas putida KT2440]
gi|313497765|gb|ADR59131.1| FlgH [Pseudomonas putida BIRD-1]
Length = 231
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 24/245 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R L + LL GC + + P +P+ +
Sbjct: 1 MNRLLSVFALGGAVLLAGCVAPTPK-PNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + + ++ + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ Y G A+ G ++ L I V +L NG + + G +
Sbjct: 106 TPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WLTLNTGEELVRIAGMVRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFF- 224
Query: 234 NLSPL 238
+SPL
Sbjct: 225 -ISPL 228
>gi|148546710|ref|YP_001266812.1| flagellar basal body L-ring protein [Pseudomonas putida F1]
gi|166214824|sp|A5W0G8|FLGH_PSEP1 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|148510768|gb|ABQ77628.1| flagellar L-ring protein [Pseudomonas putida F1]
Length = 231
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 24/245 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R L + LL GC + + P +P+ +
Sbjct: 1 MNRLLSVFALGGAVLLAGCVAPTPK-PNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + + ++ + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGT 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ Y G A+ G ++ L I V +L NG + + G +
Sbjct: 106 TPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G++R D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 166 WLTLNTGEELVRIAGMIRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFF- 224
Query: 234 NLSPL 238
+SPL
Sbjct: 225 -ISPL 228
>gi|157147099|ref|YP_001454418.1| flagellar basal body L-ring protein [Citrobacter koseri ATCC
BAA-895]
gi|157084304|gb|ABV13982.1| hypothetical protein CKO_02876 [Citrobacter koseri ATCC BAA-895]
Length = 221
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ + L GC S P + + +++ D ++ +
Sbjct: 1 MKKQLVISLLALFLSGCES--------PALL-----VKKDDAAYAPPEDIVVPETQVRGG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
L+ ++ +L +D RA VGDILTV + QA +T + N + + F
Sbjct: 48 GLYNGNYNWSLTQDRRAYRVGDILTVKLDESTQASKQARTNFGKKNDVSLGIPEAFG--- 104
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + DG +G + + L I V +L NG L I G + + +N
Sbjct: 105 --HSIDKLSGSIDGNRNFNGNATSQQQNSLRGAITVAVYKVLPNGVLAIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ VTG+VR +D++ NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 DEYMRVTGLVRAEDIERDNSVSSQRIANARISYAGRGALSDANAAGWLTRFFNHPLFPI 221
>gi|163794154|ref|ZP_02188127.1| Flagellar L-ring protein [alpha proteobacterium BAL199]
gi|159180768|gb|EDP65287.1| Flagellar L-ring protein [alpha proteobacterium BAL199]
Length = 251
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 138/243 (56%), Gaps = 8/243 (3%)
Query: 3 RYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R F + ++ L GC + ++ I P+MS + P +T+++
Sbjct: 8 RPLFATIAVAAALSGCSAVDRLANIGQAPEMSRIEDPTRGAGYQPVSMPMPAPVVATRQA 67
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW++ A FKD RA ++GDI+TV + I D+A DN T R+R NS +L+G F G
Sbjct: 68 NSLWQEGSRAFFKDQRASDIGDIITVVVTIADKAAVDNTTTRTRTNSDAAQLNGLFGYEG 127
Query: 121 QQTPQMNGN------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
T L+ ++ G G + R E++NL +A ++T L NGN+++ G QE
Sbjct: 128 SLTSVFPEAVTGGNFLDLGSSTSNVGAGKVDREEEINLRVAGVITQKLPNGNMVVYGRQE 187
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VRVN E+R + V G++R D+ + N++SYD++AEARISYGG+G+ T++ +P G Q+++
Sbjct: 188 VRVNFEVREVVVGGVIRAADITSSNTISYDQMAEARISYGGRGQITDVQQPRFGSQVLDV 247
Query: 235 LSP 237
+ P
Sbjct: 248 IMP 250
>gi|212709495|ref|ZP_03317623.1| hypothetical protein PROVALCAL_00537 [Providencia alcalifaciens DSM
30120]
gi|212687833|gb|EEB47361.1| hypothetical protein PROVALCAL_00537 [Providencia alcalifaciens DSM
30120]
Length = 245
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
++ + L GC + P + + +P + + +S
Sbjct: 24 LIATVAVTLNGCA----------HIKPRPLVDTQTSAVPTAPTAPAPNGAIFQSAQPAYY 73
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R NVGDILT++++ + A ++ +R+ +
Sbjct: 74 GYQPLFEDRRPRNVGDILTINLQENVSASKNSSANANRSGKTGFLAAILPGFMQGWLGGS 133
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
N ++ G +GKG + I V +L NGNL + G + + +N S+
Sbjct: 134 NTEIDVKGNSDFNGKGGANANNTFKGTITVTVDQLLANGNLHVVGEKRIAINQGTESIRF 193
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + A N+VS ++A+ARI Y G G E + N+SP
Sbjct: 194 SGVVNPRTIGADNNVSSTQVADARIEYVGDGYINESQTMGWLQRFFLNVSP 244
>gi|27381980|ref|NP_773509.1| flagellar basal body L-ring protein [Bradyrhizobium japonicum USDA
110]
gi|81735148|sp|Q89F32|FLGH2_BRAJA RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|27355150|dbj|BAC52134.1| flagellar L-ring protein precursor [Bradyrhizobium japonicum USDA
110]
Length = 231
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 5/222 (2%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
GC ++ P++SP+GS L + + S + S W D L++D
Sbjct: 14 TGCVGDPADALTGPRLSPVGSGLRTQADPIPVTPRMRTPVSYR---STWDDG-TDLYRDP 69
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG 135
RA GD++TV I + D+A DN+TGRSR++ + L + G N
Sbjct: 70 RARRTGDVVTVIISMQDKAKLDNKTGRSRDSQIKFGLDWLMDVAGWADKGQTT-ANLSTN 128
Query: 136 GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDV 195
G G I R E + L IAAIVT +L NGN++ISGSQE RVN E+R LNV GIVRP+D+
Sbjct: 129 TQIKGNGQIDRTEDIKLSIAAIVTDVLPNGNMMISGSQEFRVNTEMRVLNVGGIVRPRDI 188
Query: 196 DAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N++SY+KIAEAR+SYGG+G +++ +P GH++ + ++P
Sbjct: 189 SRTNTISYEKIAEARVSYGGQGNLSDVQQPGWGHRIYDAVAP 230
>gi|238788318|ref|ZP_04632112.1| Flagellar L-ring protein [Yersinia frederiksenii ATCC 33641]
gi|238723564|gb|EEQ15210.1| Flagellar L-ring protein [Yersinia frederiksenii ATCC 33641]
Length = 238
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 12/236 (5%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSY 61
R+ L LL GC P +D + P + S ++
Sbjct: 13 RWVGAPLMAVLLLNGCA-----------YIPHKPLVDGTTSAQPAPASAPLPNGSIFQAA 61
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 62 QPMNYGYQPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEG 121
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+++ G GKG + N I V +L NGNL + G +++ +N
Sbjct: 122 LLGNARADMDISGDNTFGGKGGANANNTFNGTITVTVNQVLANGNLHVVGEKQIAINQGT 181
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 182 EFIRFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNISP 237
>gi|149201612|ref|ZP_01878586.1| Flagellar L-ring protein [Roseovarius sp. TM1035]
gi|149144660|gb|EDM32689.1| Flagellar L-ring protein [Roseovarius sp. TM1035]
Length = 221
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R L GC + I E + P ++ +
Sbjct: 1 MMRRFTCTAAALIALAGCSTKIEE-------------AESELYAPVYPVEEVQQSRLMPT 47
Query: 61 YSLWRDSHAALF-KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ LF D RA VGDILTV+ A G S+ +S L S
Sbjct: 48 GSIYAGYSNGLFVADRRARAVGDILTVEFSERFAASKSQAAGSSKTDSFELDLPDVLSF- 106
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+G L + +G+G+ +++ L ++ V +L GNL I G +++ +N+
Sbjct: 107 ----GFDDGRLTSGTTRSYAGRGNATQSNSLTGRVSVSVVRVLPGGNLEIIGQKQLTLNN 162
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ + G+VRP D+ A N V D+IA A I Y G G + + + E +SPL
Sbjct: 163 GQEYIRLRGVVRPTDISADNVVRSDRIAHAEIKYVGAGDVADTAKQGWLRRAFETVSPL 221
>gi|167623364|ref|YP_001673658.1| flagellar basal body L-ring protein [Shewanella halifaxensis
HAW-EB4]
gi|167353386|gb|ABZ75999.1| flagellar L-ring protein [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 18/235 (7%)
Query: 6 FIVLCYSSLLFGC-HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
L + + L GC ++ I P +P+ + S++
Sbjct: 4 LWALLFMAALSGCNSTNGKPIADDPYYAPVYPE--------------APPTKIAATGSMY 49
Query: 65 RDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+DS A+ L+ D +AL VGDI+TV + QA S+ L
Sbjct: 50 QDSQASSLYSDIKALKVGDIITVYLMEQTQAKKSANNEISKGTDLSLD-PIYAGGGNVTI 108
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+L Y + + ++ L+ I+A V +L NGNL+I G + + +N+
Sbjct: 109 GGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEF 168
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-NLSP 237
+ +TGIVR QD+ N++ ++A ARI Y G G E+ + + P
Sbjct: 169 VRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWP 223
>gi|254292903|ref|YP_003058926.1| flagellar L-ring protein [Hirschia baltica ATCC 49814]
gi|254041434|gb|ACT58229.1| flagellar L-ring protein [Hirschia baltica ATCC 49814]
Length = 249
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 137/237 (57%), Gaps = 7/237 (2%)
Query: 8 VLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+++L C ++ IS+ P++SP+ + N P SLWR
Sbjct: 12 TFAVTAMLGACSTAGISDKMASPELSPIENPASVNGPYPVSMPQPAPITQDYAQNSLWRT 71
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF------G 120
+ F D RA ++GDILTV+I I DQA +N T RSR + +++ F L
Sbjct: 72 GARSFFDDQRAGDIGDILTVNIEISDQAQVNNTTSRSRTGNTSAEINAMFGLNELIDRNI 131
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
++ ++ +S+G G+++RAE ++L IAA++T L NGNL+I+GSQEV+VN+E
Sbjct: 132 PGGIGLSPGADFGSSSSSNGTGTVNRAETIDLTIAAVITQKLPNGNLVIAGSQEVKVNNE 191
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+R L V GI+RPQD+ A N++S+++IA+ARISYGG+G + L R + ++ ++P
Sbjct: 192 VRELVVGGIIRPQDISATNTISHEQIAQARISYGGRGDLSNLQRASTAARAVDAINP 248
>gi|83858808|ref|ZP_00952330.1| flagellar L-ring protein precursor [Oceanicaulis alexandrii
HTCC2633]
gi|83853631|gb|EAP91483.1| flagellar L-ring protein precursor [Oceanicaulis alexandrii
HTCC2633]
Length = 266
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 90/262 (34%), Positives = 133/262 (50%), Gaps = 26/262 (9%)
Query: 2 YRYSF--IVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS- 56
R V+ + L C + +S + P M + ++ + G +++
Sbjct: 4 KRILLGGAVILGAFSLTACATTDRLSYVGQTPPMHDIDNAAALTGQAGANGPTAGQAEAA 63
Query: 57 --------------TKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
+ SLWR + F D RA +VGDILTV+I I D A NQT
Sbjct: 64 RLARARAIAEARAQSNNPNSLWRAANSTTFFGDPRAAHVGDILTVNIDISDSAQVSNQTT 123
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLN------YDGGGASSGKGSISRAEKLNLLIA 155
RSR S L+ F N ++ + ++ G G+I+R+E + L A
Sbjct: 124 RSRTTSEDSNLTSFFGGEAALDQFFNDAVDPASLASFGSASSTQGAGNINRSESITLTAA 183
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
AIV +L NGNL+I G QEVR+N+E+R L ++GIVRPQD+ A N++ + +IAEARISYGG
Sbjct: 184 AIVVDVLWNGNLVIHGRQEVRINNEVRELLISGIVRPQDIAADNTIDHQQIAEARISYGG 243
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
+G +E+ RPP+G +L L P
Sbjct: 244 RGHISEMQRPPVGQELYNLLWP 265
>gi|319406980|emb|CBI80617.1| Flagellar L-ring protein [Bartonella sp. 1-1C]
Length = 221
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 7/227 (3%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA 70
S +L C ++ + P SP+ + L + S+S SL+R S ++
Sbjct: 1 MSIILASCSYNVKDFNSAPNFSPVRADLGYASSHAASIYPPAPSESRY---SLYRSSASS 57
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
++D RA+ GD+LTV I I+D+A +N++ R+++ + G+S + + G++
Sbjct: 58 FYRDPRAMKPGDVLTVQIFINDRASLNNKSDLKRDSNSKYTIGAGYSFMDK----LAGSI 113
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
S G + R E + L IAAIVT +L NGNL+I+GSQEVRVN+E+R LN+ G+V
Sbjct: 114 EGGSSSQSKGDTKVERQENIRLSIAAIVTDVLPNGNLVINGSQEVRVNNELRILNIAGLV 173
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
RP+D+ +N + YDKIAEARISYGG+GR +E+ +PP G QL+ ++P
Sbjct: 174 RPRDISGNNMIDYDKIAEARISYGGRGRMSEIQQPPYGQQLLNQIAP 220
>gi|332305618|ref|YP_004433469.1| flagellar L-ring protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172947|gb|AEE22201.1| flagellar L-ring protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 230
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISE--ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ V+ S LL C S+ + P +P+ + L +
Sbjct: 4 IMKALYVIGLSGLLSACQSTPEPDIMPNDPYYAPITAEL--------------PRQKIAE 49
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S+++ D +L+ D +A VGDI+TV ++ + A T S+ ++L G
Sbjct: 50 DGSIFQADMANSLYSDVKARRVGDIITVSLQENTSATKSAGTTTSKESALDVNPIIGLGG 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ L D +G S +++ L+ I+ V + N NL++ G + + +N
Sbjct: 110 NALNIGSQSVQLGVDSSNEFTGDASANQSNNLSGDISVTVMKVFPNQNLLVRGEKWLTLN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + +TG+VRP D+ N V KIA ARI Y G G + Q + P
Sbjct: 170 NGNEYIRLTGVVRPADISPTNEVISTKIANARIQYSGTGTFASAQKEGWLTQFFSSEYWP 229
>gi|291280518|ref|YP_003497353.1| flagellar L-ring protein FlgH [Deferribacter desulfuricans SSM1]
gi|290755220|dbj|BAI81597.1| flagellar L-ring protein FlgH [Deferribacter desulfuricans SSM1]
Length = 238
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 1 MYR--YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + ++ ++ S + +GC + + + + + K K
Sbjct: 1 MMKKNFTISLIILSFMFYGCA------------KKVVTEVPSTDYKKEIEEYRKYQAQKK 48
Query: 59 KSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S SLW D ++ F D + VGDI+ V I A N T S++ S ++
Sbjct: 49 PSPSLWTDMGNYGTFFLDYKGRKVGDIVIVKIVESSSATNSNTTKTSKSTSYKTGITNLL 108
Query: 117 SL--------FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
L F Q + N++ + +GKG +++++ IAA V +L +GNL+
Sbjct: 109 GLPTNLGMKNFLNSGNQFDPNIDASTSNSFNGKGQKQKSDQVTATIAARVIDVLPSGNLV 168
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G +E+ V+ E + ++V G++R +D+DA N+V IA+A+I+Y GKG +++ +
Sbjct: 169 IEGHREIIVDQEKQIISVKGVIRQKDIDATNTVLSTAIADAQITYTGKGMLSDVNKKGWL 228
Query: 229 HQLIENLSP 237
+I+ + P
Sbjct: 229 ANVIDWVWP 237
>gi|88813657|ref|ZP_01128886.1| Flagellar L-ring protein [Nitrococcus mobilis Nb-231]
gi|88789075|gb|EAR20213.1| Flagellar L-ring protein [Nitrococcus mobilis Nb-231]
Length = 221
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 21/239 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M IV S LL GC S++S L +
Sbjct: 1 MPTRILIVGLASLLLGGCASTLSRPPQA------------------LPEPTLEQPPKTVN 42
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ + L++D A VGD +TV + A D R S
Sbjct: 43 GAIYQSGYDVRLYEDRTARRVGDTVTVTLDEQTDASKDANAQIGRQYSYALPTPTLMGKQ 102
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + D G GS +++ L+ ++ A + + NGN++I G + + +N
Sbjct: 103 LVYNGT-PVSFDIDSEQDFQGGGSATQSNALSGVLTATIVRVKPNGNMVIQGQKRLTLNR 161
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ ++G VRP D+ N+VS ++A ARISY G G + R +L + + P
Sbjct: 162 GDEYVTLSGEVRPYDIGPGNTVSSSRVANARISYTGDGALADSSRMGWLSRLFMSIIWP 220
>gi|225849137|ref|YP_002729301.1| flagellar L-ring protein FlgH [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644708|gb|ACN99758.1| flagellar L-ring protein FlgH [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 223
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +VL S+ + GC S E +P+ D ++ +
Sbjct: 1 MKLKKLVLILSAFVIGCASKKDEYAKP--YNPV-------------PPDIPQEKVSRTAG 45
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ S+ LF DS+A NVGDI+T+ + + T + + + + Q
Sbjct: 46 SLYTGSYNNLFTDSKAFNVGDIITIKVVETIAGQTASGTNTQEQSKMSLGVPSPTIMGKQ 105
Query: 122 QTPQMN-GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + + + G S +R+ KL I+A VT + NGNL I G + V+VND+
Sbjct: 106 VPNKTPIAGITENNSDSYKGTASTNRSSKLIATISARVTKVYPNGNLFIVGKKVVKVNDD 165
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
++L ++GIV+P D+ NSV +I++ + Y G+G + +P Q ++ + P
Sbjct: 166 YQTLVISGIVKPTDILQDNSVDSSRISDMYVEYNGEGYIADSTKPGWLAQFLKKIWP 222
>gi|109899399|ref|YP_662654.1| flagellar basal body L-ring protein [Pseudoalteromonas atlantica
T6c]
gi|109701680|gb|ABG41600.1| flagellar L-ring protein [Pseudoalteromonas atlantica T6c]
Length = 230
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 18/240 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISE--ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ V+ S LL C S+ + P +P+ + L +
Sbjct: 4 IMKALYVIGLSGLLGACQSTPEPDIMPNDPYYAPITADL--------------PRQKIAE 49
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S+++ D +L+ D +A VGDI+TV + + A T S+ ++L G
Sbjct: 50 DGSIFQADMANSLYSDVKARRVGDIITVSLEENTSATKSAGTTTSKESALDVNPIVGLGG 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ L D +G S +++ L+ I+ V + N NL++ G + + +N
Sbjct: 110 NAVNIGSQSIQLGVDSSNEFTGDASANQSNNLSGDISVTVMKVFPNQNLLVRGEKWLTLN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + +TG+VRP D+ N + KIA ARI Y G G + + + P
Sbjct: 170 NGNEYIRLTGVVRPADISPTNEIVSTKIANARIQYSGTGTFASAQKEGWLTKFFSSEYWP 229
>gi|212634351|ref|YP_002310876.1| flagellar basal body L-ring protein [Shewanella piezotolerans WP3]
gi|212555835|gb|ACJ28289.1| Flagellar L-ring protein [Shewanella piezotolerans WP3]
Length = 224
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 20/240 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY +++ L GC S+ I P +P+
Sbjct: 1 MNRYWILLVIAV--LSGCSSTNEKPIADDPYYAPVYPE--------------APPTKIAA 44
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++DS A+ L+ D +AL VGDI+TV + QA + L
Sbjct: 45 TGSMYQDSQASSLYSDIKALKVGDIITVMLMESTQAKKSANNEIKKGTDLSLD-PIYAGG 103
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+L Y + + ++ L+ I+A V +L NGNL+I G + + +N
Sbjct: 104 GNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISIN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-NLSP 237
+ + +TGIVR QD+ N++ ++A ARI Y G G E+ + + P
Sbjct: 164 NGDEFVRITGIVRAQDIRPDNTIDSPRVANARIQYSGTGTFAEVQKVGWLSSFFMGSWWP 223
>gi|187731524|ref|YP_001880750.1| flagellar basal body L-ring protein [Shigella boydii CDC 3083-94]
gi|226701933|sp|B2U541|FLGH_SHIB3 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|187428516|gb|ACD07790.1| flagellar L-ring protein FlgH [Shigella boydii CDC 3083-94]
Length = 232
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSVNASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+VS ++ +ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVSSTQVVDARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|123442781|ref|YP_001006758.1| flagellar basal body L-ring protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089742|emb|CAL12595.1| flagellar L-ring protein precursor [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 227
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 12/237 (5%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKS 60
R+ L + LL GC P S +D + P + S ++
Sbjct: 1 MRWVGAPLMATLLLNGCA-----------YIPHKSLVDGSTSAQPAPASAPLPNGSIFQA 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 50 AQPMNYGYQPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLE 109
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 110 GLLGNARADMDISGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAINQG 169
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 170 TEFIRFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 226
>gi|83312592|ref|YP_422856.1| flagellar basal body L-ring protein [Magnetospirillum magneticum
AMB-1]
gi|82947433|dbj|BAE52297.1| Flagellar basal body L-ring protein [Magnetospirillum magneticum
AMB-1]
Length = 263
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 4 YSFIVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ S L C+ + +SE+ PQ SP+ + ++ P + S + +
Sbjct: 16 RALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPVSMPMPQPSAPPQNAN 75
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLWR A FKD RA +VGDILTV + I D A SR S S
Sbjct: 76 SLWRPGARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTGSEKAGSGTTGSPISA 135
Query: 122 QTP-----------QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + A + G+ +R E + + +AA++T +L NGNL+IS
Sbjct: 136 MGFEQQLSKLLPNINLASLADLSSTSAVTNSGNTTRTESITMSMAAVITQVLPNGNLVIS 195
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G QE RVN E+R L++ GI+RP+D+ + NSVS +KIAEAR+ YGG+G ++L +P G Q
Sbjct: 196 GRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGGRGMVSDLTQPRYGQQ 255
Query: 231 LIENLSP 237
+ + + P
Sbjct: 256 IFDIIFP 262
>gi|295097200|emb|CBK86290.1| Flagellar basal body L-ring protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 237
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 10/231 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+L LL GC + + P+ + P S ++
Sbjct: 16 ALLAGVLLLSGCAHILQK--------PLVDG--PTSAEPLPMAPVTTGGSLFQAGQAMNY 65
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ +F+D R +VGD LT+ ++ + A + +RN S L
Sbjct: 66 GYQPMFEDRRPRSVGDTLTILLQENVSASKSSSASANRNGSAGMGLLAMPGSSNSWLGNG 125
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
+ N +G SGKG + I V +L NGNL + G +++ +N +
Sbjct: 126 KADFNAEGKSDFSGKGGAAARNTFTGTITVTVNKLLPNGNLQVVGEKQIAINQGTEFIRF 185
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + N+V ++A+ARI Y G G E +L NLSP
Sbjct: 186 SGVVNPRTISGANTVPSTQVADARIEYVGNGYINEAQTMGWLQRLFLNLSP 236
>gi|332161325|ref|YP_004297902.1| flagellar basal body L-ring protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605245|emb|CBY26743.1| flagellar L-ring protein FlgH [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665555|gb|ADZ42199.1| flagellar basal body L-ring protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 238
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 12/236 (5%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSY 61
R+ L + LL GC P S +D + P + S ++
Sbjct: 13 RWVGAPLMATLLLNGCA-----------YIPHKSLVDGSTSAQPAPASAPLPNGSIFQAA 61
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 62 QPMNYGYQPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEG 121
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 122 LLGNARADMDISGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAINQGT 181
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 182 EFIRFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 237
>gi|71277863|ref|YP_268225.1| flagellar basal body L-ring protein [Colwellia psychrerythraea 34H]
gi|110816527|sp|Q485P0|FLGH_COLP3 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|71143603|gb|AAZ24076.1| flagellar L-ring protein FlgH [Colwellia psychrerythraea 34H]
Length = 236
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 18/237 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSIS---EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ ++ C +++ + P +P+ +E +P S
Sbjct: 11 KLLSISLLIAVTTACSNTVELSKALPNDPDFAPIMPEEEEERIVP--------------S 56
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL++ + ++ DS+A VGDI++V + QA + +T + N + G
Sbjct: 57 GSLFKPHYVNNIYSDSKAHRVGDIISVILSEKTQAKKNAKTELKKANETNLDAVTGLGGV 116
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ G + L+ I+ V +L NGNL+I G + + +N+
Sbjct: 117 PVSINGESLQFGISQDSNFKGDAKADQGNSLSGNISVHVLRVLPNGNLMIRGEKWLTLNN 176
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG++R +D++++N++ +K+A ARI Y G G + + +
Sbjct: 177 GDEYIRLTGVIRSKDINSNNTILSNKVANARIQYAGTGSFADSNEQGWLVKFFNSTW 233
>gi|70729007|ref|YP_258741.1| flagellar basal body L-ring protein [Pseudomonas fluorescens Pf-5]
gi|110816536|sp|Q4KG92|FLGH_PSEF5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|68343306|gb|AAY90912.1| flagellar L-ring protein FlgH [Pseudomonas fluorescens Pf-5]
Length = 231
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 24/245 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R+ + L S++L GC + P +P+ S
Sbjct: 1 MNRFICVLALSGSAVLAGCVA-PPPKPNDPYYAPVLP--------------RTPLPSASN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + ++ +S L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTNASKGANSALTKTSSNSIGLTSLFGA 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ N Y G A+ G +++ L I V +L NG + + G +
Sbjct: 106 VPNTNNPLGDGDLTLNAGYSGNRATKGDSKAAQSNSLTGSITVTVADVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGSFADANQPGWFDRFF- 224
Query: 234 NLSPL 238
LSPL
Sbjct: 225 -LSPL 228
>gi|163803172|ref|ZP_02197055.1| flagellar hook protein E [Vibrio sp. AND4]
gi|159173072|gb|EDP57905.1| flagellar hook protein E [Vibrio sp. AND4]
Length = 229
Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 18/237 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S LL GC I P N + + +
Sbjct: 7 MKWLSKSWAVAVVLLVGCAGRDEFIPPEP------------NTEEYAPPVLDYTLPETRF 54
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+R + LF+D RA VGD+LTV + + + T +++++ + +
Sbjct: 55 GSLYRHQYTMTLFQDRRAYRVGDVLTVQLFEETSSSKKAGTQFGKSSTVDFAVPTIGTKT 114
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++ DG + G S S+ KL I V +L NG L ISG + +R+N
Sbjct: 115 INELG-----VSVDGSRSFDGSSSSSQGNKLQGAITVTVHEVLPNGVLRISGEKWLRLNQ 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TGIVR D+ N VS +IA+ARI+Y G+G + Q +
Sbjct: 170 GDEFIRLTGIVRVDDISRSNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 226
>gi|238764395|ref|ZP_04625345.1| Flagellar L-ring protein [Yersinia kristensenii ATCC 33638]
gi|238697421|gb|EEP90188.1| Flagellar L-ring protein [Yersinia kristensenii ATCC 33638]
Length = 238
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 12/236 (5%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSY 61
R+ L LL GC P +D + P + S ++
Sbjct: 13 RWMGTPLLAMLLLNGCA-----------YIPHKPLVDGSTSAQPAPASAPLPNGSIFQAA 61
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ LF+D R N+GD LT+ ++ + A + SRN S ++
Sbjct: 62 QPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEG 121
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+L+ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 122 PLGNARADLDISGDSTFGGKGGANANNTFSGTITVTVNQVLANGNLHVVGEKQIAINQGT 181
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 182 EFIRFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 237
>gi|322421660|ref|YP_004200883.1| flagellar L-ring protein [Geobacter sp. M18]
gi|320128047|gb|ADW15607.1| flagellar L-ring protein [Geobacter sp. M18]
Length = 233
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 7 IVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
LC L GC +E+ P S SLW+
Sbjct: 15 AALCLPLLWFPGCAHQSAEVA-----------------TPTFDEQIPAPQMNYASGSLWQ 57
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
S L +D +A GDI+TV I + A T SR++S+ + L
Sbjct: 58 ASSTGLAEDLKARRRGDIVTVVISENASASKKAATATSRDSSISAGIPKLLGLETTGIKN 117
Query: 126 MNGN---LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
L+ G + G GS SR E L I+A V ++ NGNL+I G + VRVN+E +
Sbjct: 118 WADLAKLLSASYGSSFDGAGSTSRQETLQATISAKVVDVVPNGNLLIEGRRNVRVNNEDQ 177
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +TG VR +D+ A N+++ +A+A+I+Y GKG ++ +P + + + P
Sbjct: 178 IIVLTGTVRGRDISADNTINSALVADAQIAYSGKGIISDRQKPGWLLNVFDKVWP 232
>gi|77457730|ref|YP_347235.1| flagellar basal body L-ring protein [Pseudomonas fluorescens Pf0-1]
gi|110816538|sp|Q3KG60|FLGH_PSEPF RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|77381733|gb|ABA73246.1| flagellar L-ring protein [Pseudomonas fluorescens Pf0-1]
Length = 231
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 24/245 (9%)
Query: 1 MYRY-SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R+ S + L L GC + + P +P+ S
Sbjct: 1 MKRFVSVVALSGVVSLAGCVA-PTPKPNDPYYAPVLP--------------RTPLPSAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + QA + + ++N+ L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTQASKNANSQVAKNSKTGIGLTSLFGG 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ ++ Y G A+ G ++ L I V +L NG + + G +
Sbjct: 106 SATTNNPLGGNDLSLDVGYSGDRATKGDSKAAQGNTLTGSITVTVADVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGSFADASQPGWFDRFF- 224
Query: 234 NLSPL 238
LSPL
Sbjct: 225 -LSPL 228
>gi|268589979|ref|ZP_06124200.1| flagellar L-ring protein FlgH [Providencia rettgeri DSM 1131]
gi|291314697|gb|EFE55150.1| flagellar L-ring protein FlgH [Providencia rettgeri DSM 1131]
Length = 260
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
++ + GC Q+ + +P + S +S
Sbjct: 39 LLAILVLVTSGCA----------QIKSRPLVDTQTTAIPTAPTAPAPNGSIFQSAQPAYY 88
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R NVGDILT++++ + A ++ +R+ +
Sbjct: 89 GYQPLFEDRRPRNVGDILTINLQENVSASKNSSANANRSGKTGFLAAILPGFMQGWIGGK 148
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
N L+ G SGKG + I V +L NGNL + G + + +N S+
Sbjct: 149 NTELDIKGNSDFSGKGGANANNTFKGTITVTVDQLLANGNLHVVGEKRIAINQGTESIRF 208
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + + N VS ++A+ARI Y G G E + N+SP
Sbjct: 209 SGVVNPRTIGSDNHVSSTQVADARIEYVGDGYINESQNMGWLQRFFLNVSP 259
>gi|290474976|ref|YP_003467860.1| flagellar basal-body outer-membrane L (lipopolysaccharide layer)
ring protein [Xenorhabdus bovienii SS-2004]
gi|289174293|emb|CBJ81083.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Xenorhabdus
bovienii SS-2004]
Length = 250
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 22/242 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
Y++ + L GC + + + + +
Sbjct: 24 YKWRISMALAVLSLAGCA----------------YMPHKPLVKGATTANPAEAPAPTPNG 67
Query: 62 SLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S+++ + LF+D R N+GD LT+ ++ + A ++ SR+ +
Sbjct: 68 SIFQVSQPVYYGYQPLFEDRRPRNIGDTLTIILQENVSASKNSSANASRSGKTGFTAALT 127
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L+ +G GKG + I V +L NGNL G +++
Sbjct: 128 PRFLKGLMGGDKTDLSMEGDSEFGGKGGANANNTFRGTITVTVDRLLANGNLHAVGEKQI 187
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+N + +G+V P+ + N+VS +++A+ARI Y G G E + N+
Sbjct: 188 AINQGTEFIRFSGVVNPRTITGTNTVSSNQVADARIEYVGDGYINEAQTMGWLQRFFMNI 247
Query: 236 SP 237
SP
Sbjct: 248 SP 249
>gi|319403965|emb|CBI77553.1| Flagellar L-ring protein [Bartonella rochalimae ATCC BAA-1498]
Length = 221
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 7/227 (3%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA 70
S +L C ++ + P SP+ + L + S+S SL+R S ++
Sbjct: 1 MSIILASCSYNVKDFNSAPNFSPVRADLGYASSHAASIYPPAPSESRY---SLYRSSASS 57
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
++D RA+ GD+LTV I I+D+A +N++ R+++ + G+S + + G++
Sbjct: 58 FYRDPRAMKPGDVLTVQIFINDRASLNNKSDLKRDSNSKYTIGAGYSFMDK----LAGSI 113
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
S G + R E + L IAAIVT +L NGNL+I+GSQEVRVN+E+R LN+ G+V
Sbjct: 114 EGGSSSQSKGDTKVERQENIRLSIAAIVTDVLPNGNLVINGSQEVRVNNELRILNIVGLV 173
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
RP+D+ +N + YDKIAEARISYGG+GR +E+ +PP G QL+ ++P
Sbjct: 174 RPRDISGNNMIDYDKIAEARISYGGRGRMSEIQQPPYGQQLLNQIAP 220
>gi|330502737|ref|YP_004379606.1| flagellar basal body L-ring protein [Pseudomonas mendocina NK-01]
gi|328917023|gb|AEB57854.1| flagellar basal body L-ring protein [Pseudomonas mendocina NK-01]
Length = 228
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 21/241 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F L LL + + P +P+ + + + S+
Sbjct: 1 MIFSPLLAGVLLSSGCVAPTAKPDDPYYAPVLP--------------RTPLPAAQNNGSI 46
Query: 64 WRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
++ L+ D +A +GD++T+ + QA + + +++S + ++ F
Sbjct: 47 YQAGFENGLYDDRKAFRIGDVITITLNERTQASKNANSNIKKDSSANLGVTSLFGSTPSA 106
Query: 123 -----TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
M+ +DG +SG G ++ L+ I V +L NG L + G + + +
Sbjct: 107 TNPLTGGNMSLGAQFDGQREASGSGQTGQSNSLSGSITVTVAEVLPNGILAVRGEKWMTL 166
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LS 236
N + ++G+VR D+ N+V+ +IA+ARI+Y G G + +P + + L
Sbjct: 167 NTGDELVRISGLVRADDIATDNTVASTRIADARITYSGTGAFADASQPGWLSRFFVSPLW 226
Query: 237 P 237
P
Sbjct: 227 P 227
>gi|22127324|ref|NP_670747.1| flagellar basal body L-ring protein [Yersinia pestis KIM 10]
gi|45442799|ref|NP_994338.1| flagellar basal body L-ring protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108809052|ref|YP_652968.1| flagellar basal body L-ring protein [Yersinia pestis Antiqua]
gi|108810751|ref|YP_646518.1| flagellar basal body L-ring protein [Yersinia pestis Nepal516]
gi|145597820|ref|YP_001161896.1| flagellar basal body L-ring protein [Yersinia pestis Pestoides F]
gi|150260246|ref|ZP_01916974.1| lateral flagellar basal body L-ring protein [Yersinia pestis
CA88-4125]
gi|162420326|ref|YP_001604844.1| flagellar basal body L-ring protein [Yersinia pestis Angola]
gi|165924849|ref|ZP_02220681.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939042|ref|ZP_02227594.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008703|ref|ZP_02229601.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212115|ref|ZP_02238150.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399084|ref|ZP_02304608.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418950|ref|ZP_02310703.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425067|ref|ZP_02316820.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466334|ref|ZP_02331038.1| flagellar L-ring protein FlgH [Yersinia pestis FV-1]
gi|218927915|ref|YP_002345790.1| flagellar basal body L-ring protein [Yersinia pestis CO92]
gi|229837411|ref|ZP_04457574.1| Flagellar L-ring protein flgH [Yersinia pestis Pestoides A]
gi|229840626|ref|ZP_04460785.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842823|ref|ZP_04462975.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900948|ref|ZP_04516072.1| Flagellar L-ring protein flgH [Yersinia pestis Nepal516]
gi|270487669|ref|ZP_06204743.1| flagellar L-ring protein FlgH [Yersinia pestis KIM D27]
gi|294502792|ref|YP_003566854.1| flagellar L-ring protein precursor [Yersinia pestis Z176003]
gi|81594556|sp|Q8ZHZ5|FLGH1_YERPE RecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body
L-ring protein 1; Flags: Precursor
gi|226701939|sp|A9R6X4|FLGH_YERPG RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|21960405|gb|AAM86998.1|AE013948_6 putative flagellar l-ring protein [Yersinia pestis KIM 10]
gi|45437665|gb|AAS63215.1| putative flagellar L-ring protein [Yersinia pestis biovar Microtus
str. 91001]
gi|108774399|gb|ABG16918.1| flagellar L-ring protein [Yersinia pestis Nepal516]
gi|108780965|gb|ABG15023.1| putative flagellar L-ring protein [Yersinia pestis Antiqua]
gi|115346526|emb|CAL19403.1| putative flagellar L-ring protein [Yersinia pestis CO92]
gi|145209516|gb|ABP38923.1| flagellar L-ring protein [Yersinia pestis Pestoides F]
gi|149289654|gb|EDM39731.1| lateral flagellar basal body L-ring protein [Yersinia pestis
CA88-4125]
gi|162353141|gb|ABX87089.1| flagellar L-ring protein FlgH [Yersinia pestis Angola]
gi|165912998|gb|EDR31623.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923049|gb|EDR40200.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992042|gb|EDR44343.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206861|gb|EDR51341.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962944|gb|EDR58965.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051588|gb|EDR62996.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055830|gb|EDR65611.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682287|gb|EEO78379.1| Flagellar L-ring protein flgH [Yersinia pestis Nepal516]
gi|229690090|gb|EEO82147.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696992|gb|EEO87039.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229705534|gb|EEO91544.1| Flagellar L-ring protein flgH [Yersinia pestis Pestoides A]
gi|262360824|gb|ACY57545.1| flagellar L-ring protein precursor [Yersinia pestis D106004]
gi|262364769|gb|ACY61326.1| flagellar L-ring protein precursor [Yersinia pestis D182038]
gi|270336173|gb|EFA46950.1| flagellar L-ring protein FlgH [Yersinia pestis KIM D27]
gi|294353251|gb|ADE63592.1| flagellar L-ring protein precursor [Yersinia pestis Z176003]
gi|320016708|gb|ADW00280.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 221
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ I+ L GC S P + + +++ + + +
Sbjct: 1 MKRFLILTPMVLALCGCES--------PALL-----VQKDDAEFAPPANLIQPATVTEGG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
L++ +++ +L +D RA +GDILTV + Q+ +T + N + +
Sbjct: 48 GLFQPANSWSLLQDRRAYRIGDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKL 107
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + G G + ++ L I V +L NG L+I G + + +N
Sbjct: 108 NKFGG-----SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ VTG+VR DV NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 DEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 221
>gi|237731010|ref|ZP_04561491.1| flagellar basal body L-ring protein [Citrobacter sp. 30_2]
gi|226906549|gb|EEH92467.1| flagellar basal body L-ring protein [Citrobacter sp. 30_2]
Length = 235
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ I+ L GC + +P+ + P G + S
Sbjct: 4 MRKYALHPYPILALLVVSLTGCAWIPA--------TPLVQGA--TSAQPVPGPTPVANGS 53
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 54 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVP 113
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG +GKG + + + + V +L NGNL + G +++
Sbjct: 114 RYLQGLFGNERADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIA 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 174 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 233
Query: 237 PL 238
P+
Sbjct: 234 PM 235
>gi|95929876|ref|ZP_01312617.1| flagellar L-ring protein [Desulfuromonas acetoxidans DSM 684]
gi|95134172|gb|EAT15830.1| flagellar L-ring protein [Desulfuromonas acetoxidans DSM 684]
Length = 233
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 18/242 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ +L + + C P+ E ++ + + K
Sbjct: 4 MWQRIPYLLMLVAGVVACA-------------PVQPRDAEISKPVTMETPEIEAPQPKTP 50
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW + +LF D+RA VGDILTV I +A T R S ++ F L
Sbjct: 51 GSLWTTGNGSLFVDNRASRVGDILTVAIYEQAEASKQATTSTGRTTSASADITSLFGLES 110
Query: 121 QQTP-----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
++ G GS +R E L + V +L NG L ISGS+ V
Sbjct: 111 NLANLNSNIDPANLVSAGYTNDFQGSGSTTRKEDLVATLTTRVVEVLPNGTLRISGSKSV 170
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
VN E + ++++GIVR +D+ N + + +A I Y GKG + +P +L++ +
Sbjct: 171 TVNHERQLIHLSGIVRQEDITPENLIDSKYVLDANIVYTGKGVIDDKQKPGWLLRLLDTV 230
Query: 236 SP 237
+P
Sbjct: 231 TP 232
>gi|307823534|ref|ZP_07653763.1| flagellar L-ring protein [Methylobacter tundripaludum SV96]
gi|307735519|gb|EFO06367.1| flagellar L-ring protein [Methylobacter tundripaludum SV96]
Length = 236
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 18/231 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I++ SLL C P +P+ + S S+++
Sbjct: 20 ILVVELSLLQACT---PIPQRDPAFAPVAP--------------ADLRPPVQNSGSIYQS 62
Query: 67 SH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ LF+D A VGDILT+ + QA + + N + ++ F +
Sbjct: 63 GYDTRLFEDQTAKRVGDILTITLLEKTQAKKADDLNTKKENKMTAEVPSMFGIAASALTG 122
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + G G+ ++ L+ I+ V +L NGNL + G + V +N +
Sbjct: 123 QSLQTSLQSSKEFKGTGAADQSNSLSGNISVTVVDVLPNGNLNVRGEKRVTLNQGDEFIR 182
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
++GIVRP D+ + N ++ DK+A+ I Y G+G + + +++ +
Sbjct: 183 LSGIVRPVDITSSNIITSDKVADVTIMYVGEGAMADASKMGWLARILNSPW 233
>gi|261856357|ref|YP_003263640.1| flagellar L-ring protein [Halothiobacillus neapolitanus c2]
gi|261836826|gb|ACX96593.1| flagellar L-ring protein [Halothiobacillus neapolitanus c2]
Length = 230
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 22/244 (9%)
Query: 1 MYRYSF-----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M RY I L + L GC S P M P + + + + ++
Sbjct: 1 MNRYRILGLGVIGLSIVASLSGCASQ-------PPMKP------DPSFAVVMPPEASTNN 47
Query: 56 STKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ + S+++ +F DSR VGDILTV ++ TG S+ +S+
Sbjct: 48 PMQNNGSIYQSGQMDNMFVDSRPYRVGDILTVVLQESMNGSKSATTGTSKADSVAITPPA 107
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
L + +++ G G+ ++ L I+ V + NG+L + G +
Sbjct: 108 IGGLSANLMNRFGASIST--ANQFKGDGTSAQTNSLRGQISVTVARVYANGSLFVQGQKY 165
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + ++G+VRPQD+ N+V +IA+A ISYGG G + + +
Sbjct: 166 IGINQGTEYVRLSGLVRPQDIATDNTVLSTRIADAHISYGGTGTVNDANNMGWLARFFNS 225
Query: 235 -LSP 237
+ P
Sbjct: 226 PIFP 229
>gi|190574260|ref|YP_001972105.1| flagellar basal body L-ring protein [Stenotrophomonas maltophilia
K279a]
gi|226701935|sp|B2FQV2|FLGH_STRMK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|190012182|emb|CAQ45805.1| putative flagellar L-ring protein [Stenotrophomonas maltophilia
K279a]
Length = 230
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 17/233 (7%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R + + LL GC + ++ P M+P+ + + +
Sbjct: 9 RIALACTVAA-LLGGCVIAG-DVRPYPAMAPIQP--------------IMPPQAEPTAGA 52
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
++ L+ D RA +VGD+LT+ + + A T ++ ++L
Sbjct: 53 IYAAGPTLQLYSDRRARDVGDLLTITLLENTTAQTSANTATNKESNLSLGTPSILGAPVT 112
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + G +GKG+ +++ +L + V L NGNL++ G + +R+N
Sbjct: 113 LGGKDILSATAKGARDFTGKGNSAQSNRLQGSVTVTVIQRLPNGNLVVQGQKNLRLNQGD 172
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ V GIVRP D+ N++ ++AEARI YGG+G + + +
Sbjct: 173 ELVQVQGIVRPGDISQDNTIPSSRVAEARIVYGGRGPVAQSNAMGWLSRFFNS 225
>gi|157376213|ref|YP_001474813.1| flagellar basal body L-ring protein [Shewanella sediminis HAW-EB3]
gi|157318587|gb|ABV37685.1| flagellar L-ring protein [Shewanella sediminis HAW-EB3]
Length = 229
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIV---LCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M + S ++ + S +L GC S+ I P SP+
Sbjct: 1 MSKLSVLLAATIILSPVLTGCSSTGEKPIADDPYYSPVYPE--------------APPTK 46
Query: 57 TKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ S+++DS A+ L+ D +AL VGDI+TV ++ QA + L
Sbjct: 47 IAATGSMYQDSQASSLYSDIKALKVGDIITVMLQESTQAKKSASNEIKKGTDLTLD-PIY 105
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L Y + + ++ L+ I+A V +L NGNL+I G + +
Sbjct: 106 AGGKNISIGGQPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWI 165
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-N 234
+N+ + +TGIVR QD+ N++ ++A ARI Y G G ++ + +
Sbjct: 166 SINNGDEFVRITGIVRSQDIRPDNTIDSQRVANARIQYSGTGTFADVQKVGWLSSFFMGS 225
Query: 235 LSP 237
P
Sbjct: 226 WWP 228
>gi|291085565|ref|ZP_06353368.2| flagellar L-ring protein FlgH [Citrobacter youngae ATCC 29220]
gi|291071310|gb|EFE09419.1| flagellar L-ring protein FlgH [Citrobacter youngae ATCC 29220]
Length = 235
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ I+ L GC + +P+ + P G + S
Sbjct: 4 MRKYALHPYPILALLVVSLTGCAWIPA--------TPLVQGA--TSAQPIPGPTPVANGS 53
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 54 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVP 113
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG +GKG + + + + V +L NGNL + G +++
Sbjct: 114 RYLQGLFGNERADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIA 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 174 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 233
Query: 237 PL 238
P+
Sbjct: 234 PM 235
>gi|288940412|ref|YP_003442652.1| flagellar L-ring protein [Allochromatium vinosum DSM 180]
gi|288895784|gb|ADC61620.1| flagellar L-ring protein [Allochromatium vinosum DSM 180]
Length = 231
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 17/241 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
Y + L + L GC + + ++ + ++ +
Sbjct: 4 YSKTLSSLLVAFALSGCAT-------------LNPPKPGDSAEYRPVAPLEPRPASANNG 50
Query: 62 SLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
++++ + AALF+D +AL VGD++TV + A + T +++++ +
Sbjct: 51 AIFQPALGAALFEDRKALRVGDLVTVMLNEKTNAKKSSATSTAKDSNATMDVGNVTIAGR 110
Query: 121 QQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
L+ G G G S++ + + I V +L NGNL+I G + + +N
Sbjct: 111 TVLAADAQLLGLSSKAGRTFDGSGDSSQSNQFSGEITVTVAEVLPNGNLVIQGEKWLGIN 170
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ + GIVRP D+ N V+ +IA A++ YGG G + + + + P
Sbjct: 171 QGNEFVRLRGIVRPVDITKDNKVNSTQIANAQLYYGGTGALQDSNAQGWLTRFFNSPILP 230
Query: 238 L 238
+
Sbjct: 231 I 231
>gi|238758107|ref|ZP_04619287.1| Flagellar L-ring protein [Yersinia aldovae ATCC 35236]
gi|238703645|gb|EEP96182.1| Flagellar L-ring protein [Yersinia aldovae ATCC 35236]
Length = 237
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 12/233 (5%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + LL GC P ++ + P + S ++
Sbjct: 15 ICMPLTAMLLNGCA-----------YIPHKPLVEGTTSAQPAPASAPLPNGSIFQAAQPM 63
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ LF+D R N+GD LT+ ++ + A + SRN S ++
Sbjct: 64 NYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGSSKFGVATTPRYLEGLLG 123
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+++ G GKG + + I V +L NGNL + G +++ +N +
Sbjct: 124 NARADMDISGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAINQGTEFI 183
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 184 RFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNISP 236
>gi|170725958|ref|YP_001759984.1| flagellar basal body L-ring protein [Shewanella woodyi ATCC 51908]
gi|169811305|gb|ACA85889.1| flagellar L-ring protein [Shewanella woodyi ATCC 51908]
Length = 229
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIVLCYSSLL---FGCHSSI-SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y + LL GC S+ I P +P+
Sbjct: 1 MNKYWLWTVSSLVLLPVLAGCASTGGKPIADDPYYAPVYPE--------------APPTK 46
Query: 57 TKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ S+++DS A+ L+ D +AL VGDI+TV + QA + L
Sbjct: 47 IAATGSMYQDSQASSLYSDIKALKVGDIITVILMEQTQAKKSANNEIKKGTDLSLD-PIY 105
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L Y + + ++ L+ I+A V +L NGNL+I G + +
Sbjct: 106 AGGGNISIGGQPIDLRYSDSMNTKRESGADQSNSLSGSISANVMQVLNNGNLVIRGEKWI 165
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-N 234
+N+ + +TGIVR QD+ N++ ++A ARI Y G G ++ + +
Sbjct: 166 SINNGDEFVRLTGIVRSQDIRPDNTIDSPRVANARIQYSGTGTFADVQKVGWLSSFFMGS 225
Query: 235 LSP 237
P
Sbjct: 226 WWP 228
>gi|315179629|gb|ADT86543.1| flagellar L-ring protein FlgH [Vibrio furnissii NCTC 11218]
Length = 212
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 18/226 (7%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-A 70
+L GC +P ++ S +S SL+R +A
Sbjct: 1 MLILAGCAGRDE-------FTPPSPDEEKYG-----PPTLDYSLPAAQSGSLYRHQYAMT 48
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
LF+D RA VGD+LTV + + Q+ T + +S+ +
Sbjct: 49 LFQDRRAYRVGDVLTVLLAEETQSKKSADTQYGKTSSVGLSAPVVGGKTVDKLA-----A 103
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ DG + G S S+ KL I V+ +L NG + I G + +R+N + +TGIV
Sbjct: 104 SIDGDRSFDGSASSSQGNKLEGAITVTVSEVLPNGVIRIRGEKWIRLNQGDEFIRLTGIV 163
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
R D+ +N VS +I +ARI+Y G+G + Q +
Sbjct: 164 RVDDISRNNQVSSQRIGDARITYSGRGALADSNASGWLTQFFNSPW 209
>gi|302383958|ref|YP_003819781.1| flagellar L-ring protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194586|gb|ADL02158.1| flagellar L-ring protein [Brevundimonas subvibrioides ATCC 15264]
Length = 241
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 89/226 (39%), Positives = 125/226 (55%), Gaps = 9/226 (3%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRA 77
C + + + PQ++P+G + ++ SLWR A F D RA
Sbjct: 18 CSTVVETV-QGPQLAPIGYPAQLVPVTQAYTTVPEPRSASAN--SLWRTGARAFFGDQRA 74
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG--- 134
+GDILTV+I IDDQA N T RSR+N + +S F L G +
Sbjct: 75 RQIGDILTVNIDIDDQAQTSNTTSRSRSNDITGGISNFFGLENSLGRAFPGGFDPQNLVG 134
Query: 135 ---GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
++G GS+SR+EK++L IAA+VT IL NGNL+I G QEVR N E+R L V GIVR
Sbjct: 135 VEGQSNANGTGSVSRSEKVSLTIAAVVTDILSNGNLVIQGRQEVRTNREVRELTVAGIVR 194
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P+D+ + N++++ +IAEARISYGG+G + + P L+E SP
Sbjct: 195 PEDISSANTIAHTQIAEARISYGGRGDISRVQSTPAAQSLVERFSP 240
>gi|330967094|gb|EGH67354.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 263
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYR-------YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 27 MNRSGFPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 71
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + +++++ L
Sbjct: 72 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMTKDSTNSIGL 131
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y G + G G +++ L + V +L NG L
Sbjct: 132 TSLFGSGLTTNNPIGGNDLSLNAGYTGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 191
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 192 SVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 251
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 252 FDRFF--LSPL 260
>gi|312962292|ref|ZP_07776783.1| Flagellar L-ring protein [Pseudomonas fluorescens WH6]
gi|311283219|gb|EFQ61809.1| Flagellar L-ring protein [Pseudomonas fluorescens WH6]
Length = 231
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 24/245 (9%)
Query: 1 MYRY-SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY S + L ++L GC + + P +P+ +
Sbjct: 1 MNRYVSVLALSGIAVLAGCVA-PTPKPNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + QA + + + + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNEKTQASKNANSQIGKTSKASLGLTSLFGG 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ ++ + Y G A++GK + ++ L I V +L NG + + G +
Sbjct: 106 VPNTNNPLGSGDLSLDAGYSGDRATNGKSAAAQGNTLTGSITVTVADVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V +IA+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGMVRADDIATDNTVPSTRIADARITYSGTGSFADASQPGWFDRFF- 224
Query: 234 NLSPL 238
LSPL
Sbjct: 225 -LSPL 228
>gi|229591868|ref|YP_002873987.1| flagellar basal body L-ring protein [Pseudomonas fluorescens SBW25]
gi|259645995|sp|C3K0W0|FLGH_PSEFS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|229363734|emb|CAY51138.1| flagellar L-ring protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 24/245 (9%)
Query: 1 MYRY-SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY S + L ++L GC + + P +P+ +
Sbjct: 1 MNRYVSVLALSGIAVLAGCVA-PTPKPNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + QA + + + + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNEKTQASKNANSQVGKTSKTGIGLTSLFGA 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + Y G A++GK S + L I V +L NG + + G +
Sbjct: 106 VPNTNNPLGDGDLSLSAGYSGDRATNGKSSAGQGNSLTGSITVTVADVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V +IA+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGMVRADDISTDNTVPSTRIADARITYSGTGSFADASQPGWFDRFF- 224
Query: 234 NLSPL 238
LSPL
Sbjct: 225 -LSPL 228
>gi|37525844|ref|NP_929188.1| flagellar basal body L-ring protein [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36785273|emb|CAE14214.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|37681980|gb|AAQ97868.1| FlgH [Photorhabdus luminescens]
Length = 250
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 92/242 (38%), Gaps = 22/242 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + L GC + + + +
Sbjct: 24 NKWRCSIALAVLSLTGCA----------------YIPQKPLVEGATTAAPSVATAPVPNG 67
Query: 62 SLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++++ + LF+D R N+GD LT+ ++ + A ++ SRN +
Sbjct: 68 AIFQVVQPVYYGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKNTFSAALT 127
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L+ + GKG + I V +L NGNL + G +++
Sbjct: 128 PRFLKGLIGGDKTDLDMEAENTFGGKGGANANNTFKGTITVTVDRLLANGNLHVVGEKQI 187
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+N + +G+V P+ ++A+N+VS +++A+ARI Y G G E + N+
Sbjct: 188 AINQGTEFIRFSGVVNPRTINANNTVSSNQVADARIEYVGNGYINEAQNMGWLQRFFLNV 247
Query: 236 SP 237
+P
Sbjct: 248 AP 249
>gi|167645394|ref|YP_001683057.1| flagellar basal body L-ring protein [Caulobacter sp. K31]
gi|167347824|gb|ABZ70559.1| flagellar L-ring protein [Caulobacter sp. K31]
Length = 238
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 86/225 (38%), Positives = 128/225 (56%), Gaps = 10/225 (4%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRAL 78
S+++E P+++P+G + + S SLWR A F D RA
Sbjct: 17 CSTVAEAVKGPELAPVGYPAQLAPMTQQYAPQPQAA----SSNSLWRTGARAFFNDQRAS 72
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN------LNY 132
VGDILTV+I IDD A NQT SR ++ + L + G +N
Sbjct: 73 KVGDILTVNIDIDDSATTKNQTQTSRASNSSLGVPNFLGLESSLGKVLPGGFDPANMINT 132
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
G +++G G+++R+EK++L IAA+V+ +L NGNL+I G+QEVR N E+R L V GIVRP
Sbjct: 133 KSGTSNAGAGAVNRSEKISLTIAAVVSGVLPNGNLVIQGTQEVRTNAEVRQLTVAGIVRP 192
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ + N++ + +IAEARISYGG+G + + + P G L+E SP
Sbjct: 193 EDISSANTIKHTQIAEARISYGGRGDISRVQKVPGGQALVEKFSP 237
>gi|300722679|ref|YP_003711969.1| flagellar basal-body outer-membrane L ring protein [Xenorhabdus
nematophila ATCC 19061]
gi|297629186|emb|CBJ89782.1| flagellar biosynthesis; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Xenorhabdus
nematophila ATCC 19061]
Length = 263
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 13/238 (5%)
Query: 2 YRYSFIVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKK 59
S VL S L L GC P + + P + S +
Sbjct: 36 ISISMAVLTLSVLTLGGCA-----------YIPHKPLVQGQTTAKPTETPVPMPNGSIFQ 84
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + LF+D R N+GD LT+ ++ + A ++ SR+ +
Sbjct: 85 TVQPVYYGYQPLFEDRRPRNIGDTLTIILQENVSASKNSSANASRSGKTGFAAALTPRFL 144
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+L +G GKG + I V +L NGNL + G +++ +N
Sbjct: 145 QGLIGSDKTDLGMEGNNEFGGKGGANANNTFKGTITVTVDTLLANGNLHVVGEKQIAINQ 204
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + +N+VS +++A+ARI Y G G E + N+SP
Sbjct: 205 GTEFIRFSGVVNPRTITGNNTVSSNQVADARIEYVGDGYINEAQHMGWLQRFFMNISP 262
>gi|188579871|ref|YP_001923316.1| flagellar L-ring protein [Methylobacterium populi BJ001]
gi|179343369|gb|ACB78781.1| flagellar L-ring protein [Methylobacterium populi BJ001]
Length = 236
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRA 77
C S I++I+ P ++P+GS L+ L F + +S W + AAL++D RA
Sbjct: 19 CQSDIAQISRPPVLTPIGSGLNAP--REPLPTTFGALGARHSYHSTWSPASAALYQDPRA 76
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
+VGD++TV I I+D+A FDN + R+R+ G+ + + + G
Sbjct: 77 RDVGDVITVSIAINDKAQFDNASERARSQKSSLGFDFGYGVSALKD-TATADTGIRSGTE 135
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ G+GSI R E L+L +AA+VT +L NGN++ISGSQEVRVN+E+R L V GIVRP+D+
Sbjct: 136 TKGQGSIDRKESLSLSVAAVVTEVLPNGNVVISGSQEVRVNNEVRVLEVAGIVRPRDISR 195
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N++ YDKIAEARISYGG+GR T++ P +G ++ E ++P
Sbjct: 196 KNTIDYDKIAEARISYGGRGRITDVQGPTLGQRVFETVAP 235
>gi|24374754|ref|NP_718797.1| flagellar basal body L-ring protein [Shewanella oneidensis MR-1]
gi|31076704|sp|Q8ECA1|FLGH_SHEON RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|24349418|gb|AAN56241.1|AE015761_11 flagellar L-ring protein FlgH [Shewanella oneidensis MR-1]
Length = 224
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 16/224 (7%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKD 74
C S +P D+ P + S+++DS A +L+ D
Sbjct: 14 TACSS-----------TPKKPIADDPFYAPVYP--EAPPTKIAATGSIYQDSQAASLYSD 60
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGDI+T+ ++ QA + + + + +L Y
Sbjct: 61 IRAHKVGDIITIVLKEATQAKKSAGNQIKKGSDMTLD-PVYAGGSNLSLGGIPLDLRYKD 119
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
+ + ++ L+ I+A + +L NGNL++ G + + +N+ + VTGIVR QD
Sbjct: 120 SMNTKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQD 179
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ N++ ++A ARI Y G G E + Q + P
Sbjct: 180 IKPDNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMSDWWP 223
>gi|330961202|gb|EGH61462.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 261
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 25 MKRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 69
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + S+N++ L
Sbjct: 70 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMSKNSTNSIGL 129
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G ++G G +++ L + V +L NG L
Sbjct: 130 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTNGDGKAAQSNSLTGSVTVTVADVLPNGIL 189
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 190 SVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 249
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 250 FDRFF--LSPL 258
>gi|117919775|ref|YP_868967.1| flagellar basal body L-ring protein [Shewanella sp. ANA-3]
gi|166214828|sp|A0KUU2|FLGH_SHESA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|117612107|gb|ABK47561.1| flagellar L-ring protein FlgH [Shewanella sp. ANA-3]
Length = 224
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 32 SPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRI 90
+P D+ P + S+++DS A +L+ D RA VGDI+T+ ++
Sbjct: 19 TPKKPIADDPFYAPVYP--EAPPTKIAATGSIYQDSQAASLYSDIRAHKVGDIITIVLKE 76
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
QA + + + + +L Y + + ++ L
Sbjct: 77 ATQAKKSAGNQIKKGSDMTLD-PIYAGGSNVSLGGIPLDLRYKDSMNTKRESDADQSNSL 135
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
+ I+A + +L NGNL++ G + + +N+ + VTGIVR QD+ N++ ++A AR
Sbjct: 136 DGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQDIKPDNTIDSTRMANAR 195
Query: 211 ISYGGKGRTTELLRPPIGHQLIEN-LSP 237
I Y G G E + Q + P
Sbjct: 196 IQYSGTGTFAEAQKVGWLSQFFMSDWWP 223
>gi|327480023|gb|AEA83333.1| flagellar basal body L-ring protein [Pseudomonas stutzeri DSM 4166]
Length = 231
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIV-LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R +V + + L GC + + P +P+ + +
Sbjct: 1 MSRLLIVVSMSSALALVGCVA-PAPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ L+ D +A VGDI+T+ + QA + + S+++S + L F
Sbjct: 46 NGAIYQAGFETNLYDDRKAHRVGDIITITLNERTQASKNATSKLSKDSSANIGLGSLFGG 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
MN Y+ +SG G ++ L+ I V+ +L NG L + G +
Sbjct: 106 AVSMANPLTGNSMNLGAEYEASRDTSGSGQAGQSNSLSGSITVTVSEVLPNGILAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+V +IA+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGLVRADDISTDNTVPSTRIADARITYSGTGAFADASQPGWLDRFFM 225
Query: 234 N-LSP 237
+ + P
Sbjct: 226 SPMWP 230
>gi|324113874|gb|EGC07848.1| flagellar L-ring protein [Escherichia fergusonii B253]
gi|325497613|gb|EGC95472.1| flagellar basal body L-ring protein [Escherichia fergusonii ECD227]
Length = 246
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 10/233 (4%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
I L GC S +P+ P G + S +S
Sbjct: 24 VIASLLVFSLTGCAWIPS--------TPLVQGA--TTAQPVPGPTPVANGSIFQSAQPIN 73
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 74 YGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGN 133
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+++ GG + +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 134 ARADVDASGGNSFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIR 193
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 194 FSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 246
>gi|226327741|ref|ZP_03803259.1| hypothetical protein PROPEN_01614 [Proteus penneri ATCC 35198]
gi|225203445|gb|EEG85799.1| hypothetical protein PROPEN_01614 [Proteus penneri ATCC 35198]
Length = 247
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 86/239 (35%), Gaps = 22/239 (9%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
L GC + + + + + S++
Sbjct: 24 RLGTALLVLTLAGCAHIPKKPLVEGNTTAV----------------PTAPTAPAPNGSIF 67
Query: 65 RD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + LF+D R N+GD LT+ ++ + A ++ SRN S
Sbjct: 68 QATQPVYFGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKAGFLASITPRF 127
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ +G GKG + I V +L NGNL + G +++ +N
Sbjct: 128 LEGLFGNNRADMGMEGNSDFGGKGGANANNTFKGTITVTVDQLLANGNLHVIGEKQIAIN 187
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 QGTEFIRFSGVVNPRTISGSNTVNSTQVADARIEYIGDGYINEAQSMGWLQRFFLNVSP 246
>gi|157146223|ref|YP_001453542.1| flagellar basal body L-ring protein [Citrobacter koseri ATCC
BAA-895]
gi|157083428|gb|ABV13106.1| hypothetical protein CKO_01980 [Citrobacter koseri ATCC BAA-895]
Length = 250
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I+ L GC S +P+ P G + S +S
Sbjct: 29 IMALLVVSLTGCAWIPS--------TPLVQGA--TTAQPIPGPTPVANGSIFQSAQPINY 78
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 79 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 138
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG + +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 139 RADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRF 198
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + NSV ++A+ARI Y G G E + NLSP+
Sbjct: 199 SGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 250
>gi|319405405|emb|CBI79024.1| Flagellar L-ring protein [Bartonella sp. AR 15-3]
Length = 217
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 134/223 (60%), Gaps = 7/223 (3%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
+ C ++ + P SP+ + L + S+S SL+R S + ++D
Sbjct: 1 MTSCSYNVKDFNSAPSFSPVRADLGYASSHTASVYPPAPSESRY---SLYRSSANSFYRD 57
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA+ GD+LTV I I+D+A +N++ R++S + G+S + + G++ +
Sbjct: 58 PRAMKPGDVLTVQIFINDRASLNNKSDLKRDSSSKYTIGAGYSFMDK----LAGSIEGES 113
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
S G + R E + L IAAIVT +L NGNL+I+GSQEVRVN+E+R LN+ G+VRP+D
Sbjct: 114 SSQSKGDTKVERQENIRLSIAAIVTNVLPNGNLVINGSQEVRVNNELRILNIAGLVRPRD 173
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +N + YDKIAEARISYGG+GR +E+ +PP G QL+ ++P
Sbjct: 174 ISGNNMIDYDKIAEARISYGGRGRMSEIQQPPYGQQLLNQIAP 216
>gi|329849716|ref|ZP_08264562.1| flagellar L-ring family protein [Asticcacaulis biprosthecum C19]
gi|328841627|gb|EGF91197.1| flagellar L-ring family protein [Asticcacaulis biprosthecum C19]
Length = 239
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 11/243 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L +S++ G ++SE PQ++ M + + S
Sbjct: 1 MKTIALTALAFSAVTLGACGTVSETVKGPQLTAMAYPV-----AVIPAQQAVIQPAPASS 55
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLWR F D RA NVGDILT+ + IDD A N T RSR NS F L
Sbjct: 56 NSLWRAGARTFFNDQRARNVGDILTIQVDIDDSAQTQNSTDRSRTNSYEASTPSIFGLES 115
Query: 121 QQTPQMNGNLN------YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ N DG SG GS+ R+EK+++ +AA VT ++ NGNL+I G QE
Sbjct: 116 SLGKLLPSEYNPTRALGADGSSTFSGNGSVQRSEKISVTLAATVTGVMRNGNLVIQGHQE 175
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VR E+R L+V GIVRP+D+ + N++ + ++AEARISYGGKG T + + P+ +++
Sbjct: 176 VRTGREMRVLSVAGIVRPEDISSTNTIRHTQLAEARISYGGKGDITNMQQAPVTQNIMDK 235
Query: 235 LSP 237
SP
Sbjct: 236 FSP 238
>gi|188997555|ref|YP_001931806.1| flagellar L-ring protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932622|gb|ACD67252.1| flagellar L-ring protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 223
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 17/238 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + GC P + + + +
Sbjct: 1 MKRLILLFGIIGFITAGCAKKTEYG------KPFNPN----------PPEIEQEKVVRTP 44
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ S+ LF DS+A VGD++T+ + + + T + + +
Sbjct: 45 GSLYTGSYNNLFSDSKAFTVGDVITIKVVENIAGQTASNTNTQEQQKMDLNVPSPKLMGK 104
Query: 121 QQTPQMN-GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + G S +R L I+A VT + NGNL I G + V+VND
Sbjct: 105 DLINKTPIAGITEQNSDTHKGSASTNRKSTLIATISARVTKVYPNGNLFIVGKKVVKVND 164
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++L ++GIV+P D+ NSV +I++ + Y G+G + RP Q ++ + P
Sbjct: 165 DYQTLVISGIVKPTDIMQDNSVDSSRISDMYVEYNGEGYMADSSRPGWLAQFLKRIWP 222
>gi|304392502|ref|ZP_07374442.1| flagellar L-ring protein FlgH [Ahrensia sp. R2A130]
gi|303295132|gb|EFL89492.1| flagellar L-ring protein FlgH [Ahrensia sp. R2A130]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ L L GC I ++ MS + + ++ G SL+R
Sbjct: 3 LALILVLLASGCA-QIDKLDQPKPMSAVEHPVAQHAYARQPGS--------ATRSSLYRP 53
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ + LF D AL+ GDI+TV + IDD+A N++ R R G G
Sbjct: 54 ARSGLFTDRIALDPGDIVTVLVSIDDRASLQNKSERQRTVGRTLS-GQGTIAAGSLVGTG 112
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
+G+ + G G+ RAE + + +AAI+ NGNL++ GSQEVRVN E+R L V
Sbjct: 113 SGSAGLESQTRFDGDGATVRAETIRVSVAAIIRQRYPNGNLLVEGSQEVRVNRELRRLTV 172
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
TGI+RP D+ +N++ ++IAEARISYGG+G E+ +PP G +L++ + P
Sbjct: 173 TGIIRPSDIGPNNTIQSERIAEARISYGGRGPIAEVQKPPYGARLLDKVLP 223
>gi|51596014|ref|YP_070205.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis IP
32953]
gi|108807176|ref|YP_651092.1| flagellar basal body L-ring protein [Yersinia pestis Antiqua]
gi|108812480|ref|YP_648247.1| flagellar basal body L-ring protein [Yersinia pestis Nepal516]
gi|145598607|ref|YP_001162683.1| flagellar basal body L-ring protein [Yersinia pestis Pestoides F]
gi|149366248|ref|ZP_01888283.1| flagellar L-ring protein precursor [Yersinia pestis CA88-4125]
gi|165938678|ref|ZP_02227233.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010850|ref|ZP_02231748.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
E1979001]
gi|167419992|ref|ZP_02311745.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425807|ref|ZP_02317560.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170024644|ref|YP_001721149.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis
YPIII]
gi|186895117|ref|YP_001872229.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis
PB1/+]
gi|218928925|ref|YP_002346800.1| flagellar basal body L-ring protein [Yersinia pestis CO92]
gi|229896245|ref|ZP_04511415.1| flagellar L-ring protein precursor [Yersinia pestis Pestoides A]
gi|229897180|ref|ZP_04512336.1| flagellar L-ring protein precursor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229902862|ref|ZP_04517979.1| flagellar L-ring protein precursor [Yersinia pestis Nepal516]
gi|270486642|ref|ZP_06203716.1| flagellar L-ring protein FlgH [Yersinia pestis KIM D27]
gi|294504027|ref|YP_003568089.1| flagellar L-ring protein precursor [Yersinia pestis Z176003]
gi|81518689|sp|Q8ZFB2|FLGH2_YERPE RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|81639723|sp|Q66BT9|FLGH1_YERPS RecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body
L-ring protein 1; Flags: Precursor
gi|51589296|emb|CAH20917.1| flagellar L-ring protein precursor [Yersinia pseudotuberculosis IP
32953]
gi|108776128|gb|ABG18647.1| flagellar L-ring protein precursor [Yersinia pestis Nepal516]
gi|108779089|gb|ABG13147.1| flagellar L-ring protein precursor [Yersinia pestis Antiqua]
gi|115347536|emb|CAL20445.1| flagellar L-ring protein precursor [Yersinia pestis CO92]
gi|145210303|gb|ABP39710.1| flagellar L-ring protein precursor [Yersinia pestis Pestoides F]
gi|149292661|gb|EDM42735.1| flagellar L-ring protein precursor [Yersinia pestis CA88-4125]
gi|165913292|gb|EDR31914.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. IP275]
gi|165990194|gb|EDR42495.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166961687|gb|EDR57708.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167055206|gb|EDR65003.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751178|gb|ACA68696.1| flagellar L-ring protein [Yersinia pseudotuberculosis YPIII]
gi|186698143|gb|ACC88772.1| flagellar L-ring protein [Yersinia pseudotuberculosis PB1/+]
gi|229680309|gb|EEO76408.1| flagellar L-ring protein precursor [Yersinia pestis Nepal516]
gi|229693517|gb|EEO83566.1| flagellar L-ring protein precursor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701168|gb|EEO89197.1| flagellar L-ring protein precursor [Yersinia pestis Pestoides A]
gi|262361787|gb|ACY58508.1| flagellar L-ring protein precursor [Yersinia pestis D106004]
gi|262366077|gb|ACY62634.1| flagellar L-ring protein precursor [Yersinia pestis D182038]
gi|270335146|gb|EFA45923.1| flagellar L-ring protein FlgH [Yersinia pestis KIM D27]
gi|294354486|gb|ADE64827.1| flagellar L-ring protein precursor [Yersinia pestis Z176003]
gi|320015464|gb|ADV99035.1| flagellar L-ring protein precursor [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 229
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 13/239 (5%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTK 58
MY R L LL GC P +D + P + S
Sbjct: 1 MYLRKISAPLMTMLLLNGCA-----------YIPHKPLVDGTTSAQPAPASAPLPNGSIF 49
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
++ + LF+D R N+GD LT+ ++ + A + SRN + ++
Sbjct: 50 QTVQPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRY 109
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 110 LDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAIN 169
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV+ ++A+ARI Y G G E + N+SP
Sbjct: 170 QGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 228
>gi|330808198|ref|YP_004352660.1| flagellar L-ring protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376306|gb|AEA67656.1| flagellar L-ring protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 231
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 1 MYRY-SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R+ S + L + L GC + + P +P+ +
Sbjct: 1 MKRFVSVLALSGITALAGCVA-PTPRPNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + QA + + + ++ L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTQASKNANSQMDKTSNTSVGLTSLFGS 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ N Y+ A+ G ++ L I V +L NG +++ G +
Sbjct: 106 SLTTNNPIGGNDLSLNAGYNSDRATKGDSKSGQSNSLTGSITVTVADVLPNGIIVVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS ++A+ARI+Y G G + +P +
Sbjct: 166 WLTLNTGDELVRIAGMVRADDIATDNTVSSTRVADARITYSGTGAFADASQPGWFDRFFL 225
Query: 234 N 234
+
Sbjct: 226 S 226
>gi|218549193|ref|YP_002382984.1| flagellar basal body L-ring protein [Escherichia fergusonii ATCC
35469]
gi|226701924|sp|B7LT58|FLGH_ESCF3 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|218356734|emb|CAQ89362.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
fergusonii ATCC 35469]
Length = 232
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 10/233 (4%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
I L GC S +P+ P G + S +S
Sbjct: 10 VIASLLVFSLTGCAWIPS--------TPLVQGA--TTAQPVPGPTPVANGSIFQSAQPIN 59
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 60 YGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGN 119
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+++ GG + +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 120 ARADVDASGGNSFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIR 179
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 180 FSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|22126387|ref|NP_669810.1| flagellar basal body L-ring protein [Yersinia pestis KIM 10]
gi|45441406|ref|NP_992945.1| flagellar basal body L-ring protein [Yersinia pestis biovar
Microtus str. 91001]
gi|153950284|ref|YP_001401287.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis IP
31758]
gi|165925895|ref|ZP_02221727.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166210591|ref|ZP_02236626.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401004|ref|ZP_02306507.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|21959373|gb|AAM86061.1|AE013853_9 basal-body outer-membrane L (lipopolysaccharide layer) ring protein
[Yersinia pestis KIM 10]
gi|45436266|gb|AAS61822.1| basal-body outer-membrane L (lipopolysaccharide layer) ring protein
[Yersinia pestis biovar Microtus str. 91001]
gi|152961779|gb|ABS49240.1| flagellar L-ring protein FlgH [Yersinia pseudotuberculosis IP
31758]
gi|165922099|gb|EDR39276.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166207771|gb|EDR52251.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167049393|gb|EDR60801.1| flagellar L-ring protein FlgH [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 243
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 13/239 (5%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTK 58
MY R L LL GC P +D + P + S
Sbjct: 15 MYLRKISAPLMTMLLLNGCA-----------YIPHKPLVDGTTSAQPAPASAPLPNGSIF 63
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
++ + LF+D R N+GD LT+ ++ + A + SRN + ++
Sbjct: 64 QTVQPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRY 123
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 124 LDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAIN 183
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV+ ++A+ARI Y G G E + N+SP
Sbjct: 184 QGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 242
>gi|297570289|ref|YP_003691633.1| flagellar L-ring protein [Desulfurivibrio alkaliphilus AHT2]
gi|296926204|gb|ADH87014.1| flagellar L-ring protein [Desulfurivibrio alkaliphilus AHT2]
Length = 235
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M Y ++ S L GC ++ S +G + S E F D + T
Sbjct: 1 MRNYILLIALLSLWLTGCATTGSSGSGGSDQAAAPPS--ERLPERFAMPDPGSPPETPAE 58
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+++ + L++D+RA VGDIL V + + T R++S++ +S F L
Sbjct: 59 GTIYNGNRGLDLYRDNRAREVGDILLVRVVETSSGRKNATTIAERDSSINAGISSFFGLD 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ ++N G+G SR + I+A V GNL+I G QEVRVN+
Sbjct: 119 NFVGER--SSINAGINTDFEGRGRTSRDSDVTATISARVVDKTMEGNLVIRGYQEVRVNN 176
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E + + ++G+VRP D++A NSV+ D+IA+ARI Y GKG + RP + ++ + P
Sbjct: 177 ETQFIILSGLVRPDDINASNSVNSDRIADARIEYSGKGLLADKQRPGWLSRAVQAIWP 234
>gi|253990124|ref|YP_003041480.1| flagellar basal body L-ring protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781574|emb|CAQ84737.1| flagellar l-ring protein precursor (basal body l-ring protein)
[Photorhabdus asymbiotica]
Length = 250
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + L GC + + + +
Sbjct: 24 NKWRCSIALAVLSLTGCA----------------YIPQKPLVEGATTAAPSATTAPVPNG 67
Query: 62 SLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++++ + LF+D R N+GD LT+ ++ + A ++ SRN +
Sbjct: 68 AIFQVVQPIYYGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKTSFSATLT 127
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L+ +G GKG + I V +L NGNL + G +++
Sbjct: 128 PRFLKGLIGGDKTDLDMEGENTFGGKGGANANNTFRGTITVTVDQLLANGNLHVVGEKQI 187
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+N + +G+V P+ ++A+N+VS +++A+ARI Y G G E + N+
Sbjct: 188 AINQGTEFIRFSGVVNPRTINANNTVSSNQVADARIEYVGNGYINEAQNMGWLQRFFLNV 247
Query: 236 SP 237
+P
Sbjct: 248 AP 249
>gi|327393474|dbj|BAK10896.1| flagellar L-ring protein precursor FlgH [Pantoea ananatis AJ13355]
Length = 234
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 91/240 (37%), Gaps = 24/240 (10%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++V L GC +P+ +P + S+++
Sbjct: 10 WLVASLLLTLNGCALVPR--------TPLVQGATTAQPLPSAPPVV--------NGSIFQ 53
Query: 66 D------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ LF+D R N+GD LT+ ++ + A + + SRN S ++ +
Sbjct: 54 GVAPLNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSTSNASRNGSGSLGITAVPTGL 113
Query: 120 GQQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
N G +GKG S I V +L NGNL + G +++ +
Sbjct: 114 AGLAGASGEKANFAAGGKNDFAGKGGASANNTFTGTITVTVDQVLSNGNLHVVGEKQIEI 173
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + +G+V P+ + A N+V +A+ARI Y G G E + N+SP
Sbjct: 174 NQGTEFIRFSGVVNPRTISASNAVLSTAVADARIEYVGNGYINEAQNMGWLQRFFLNISP 233
>gi|302185579|ref|ZP_07262252.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
syringae 642]
Length = 237
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + S++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G ++ G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARSTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|113969609|ref|YP_733402.1| flagellar basal body L-ring protein [Shewanella sp. MR-4]
gi|123130593|sp|Q0HKS2|FLGH_SHESM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|113884293|gb|ABI38345.1| flagellar L-ring protein [Shewanella sp. MR-4]
Length = 224
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 5/208 (2%)
Query: 32 SPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRI 90
+ D+ P + S+++DS A +L+ D RA VGDI+T+ ++
Sbjct: 19 TSKKPIADDPFYAPVYP--EAPPTKIAATGSIYQDSQAASLYSDIRAHKVGDIITIVLKE 76
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
QA + + L + +L Y + + ++ L
Sbjct: 77 ATQAKKSAGNQIKKGSDLSLD-PIYAGGSNVSIGGVPLDLRYKDSMNTKRESDADQSNSL 135
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
+ I+A V +L NGNL++ G + + +N+ + VTGIVR QD+ N++ ++A AR
Sbjct: 136 DGSISANVMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQDIKPDNTIDSTRMANAR 195
Query: 211 ISYGGKGRTTELLRPPIGHQLIEN-LSP 237
I Y G G + + Q + P
Sbjct: 196 IQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|289627767|ref|ZP_06460721.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651642|ref|ZP_06482985.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298487852|ref|ZP_07005892.1| Flagellar L-ring protein flgH [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157577|gb|EFH98657.1| Flagellar L-ring protein flgH [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866426|gb|EGH01135.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 237
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + +++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMTKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYTGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|284920902|emb|CBG33965.1| flagellar L-ring protein [Escherichia coli 042]
Length = 232
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|195940719|ref|ZP_03086101.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
EC4024]
Length = 232
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I+ + L GC S+ P+ P G + S ++
Sbjct: 11 ILTVLAVTLSGCAWIPSK--------PLVQGA--TTAQPVPGPAPVVNGSIFQTAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R NVGD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNVGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
+L GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADLEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGTNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|242238972|ref|YP_002987153.1| flagellar L-ring protein [Dickeya dadantii Ech703]
gi|242131029|gb|ACS85331.1| flagellar L-ring protein [Dickeya dadantii Ech703]
Length = 228
Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 12/238 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKK 59
M S +++ + L GC P + ++ + P + + + S +
Sbjct: 1 MAGRSVLLVSAAIALAGCA-----------YMPHKNLVEGDTTAQPAPAVMYATNGSIFQ 49
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + LF+D R NVGDILT+ ++ + A + SR+ S ++ +
Sbjct: 50 TVQPMNYGYQPLFEDRRPRNVGDILTITLQENVSASKSSTASASRDGSATSTVTTAPRML 109
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+L+ G +GKG + + I V +L NGNL + G +++ +N
Sbjct: 110 QGLFGNQRADLDAAGTNDFTGKGGATASNTFTGTITVTVREVLSNGNLKVVGEKQIAINQ 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV ++A+ARI Y GKG E + N++P
Sbjct: 170 GAEYIRFSGVVNPRTITGTNSVVSTQVADARIEYVGKGYINEAQEMGWLQRFFLNVAP 227
>gi|330953728|gb|EGH53988.1| flagellar basal body L-ring protein [Pseudomonas syringae Cit 7]
Length = 237
Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + +++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMTKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|77165835|ref|YP_344360.1| flagellar L-ring protein [Nitrosococcus oceani ATCC 19707]
gi|110816532|sp|Q3J8L6|FLGH_NITOC RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|76884149|gb|ABA58830.1| Flagellar L-ring protein [Nitrosococcus oceani ATCC 19707]
Length = 234
Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 28/249 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ + GC + + P + +
Sbjct: 1 MNIKKIVLGIAGFFITGCAAQLPP--PDPSFAATRP--------------VATPPPQPNN 44
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-- 117
+++ + +LF D RA +GD++TV + A + T R+ S
Sbjct: 45 GAIYHAGYEISLFTDYRARQIGDVITVVLEERTDAEKGSDTAIDRDTSYSLTNPTLLGSG 104
Query: 118 --------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
L + + GA SG G S+ +LN I V +L NGNL+I
Sbjct: 105 VQFNTPNWLPLASNQDNSLEMAVKAKGAFSGGGDSSQNNRLNGHITVTVAEVLPNGNLVI 164
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G + V +N + ++GIV +D+ N+VS K+A+AR++Y G G T E R
Sbjct: 165 RGEKVVTINHGNEYIKISGIVNRRDIKPDNTVSSLKLADARLAYVGDGATHEANRMGWLS 224
Query: 230 QLIEN-LSP 237
+ + P
Sbjct: 225 RFFFSRFMP 233
>gi|66046703|ref|YP_236544.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
syringae B728a]
gi|75501290|sp|Q4ZQR6|FLGH_PSEU2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|63257410|gb|AAY38506.1| Flagellar L-ring protein [Pseudomonas syringae pv. syringae B728a]
Length = 237
Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + S++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|291617023|ref|YP_003519765.1| FlgH [Pantoea ananatis LMG 20103]
gi|291152053|gb|ADD76637.1| FlgH [Pantoea ananatis LMG 20103]
Length = 236
Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 91/240 (37%), Gaps = 24/240 (10%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++V L GC +P+ +P + S+++
Sbjct: 12 WLVASLLLTLNGCALVPR--------TPLVQGATTAQPLPSAPPVV--------NGSIFQ 55
Query: 66 D------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ LF+D R N+GD LT+ ++ + A + + SRN S ++ +
Sbjct: 56 GVAPLNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSTSNASRNGSGSLGITAVPTGL 115
Query: 120 GQQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
N G +GKG S I V +L NGNL + G +++ +
Sbjct: 116 AGLAGASGEKANFAAGGKNDFAGKGGASANNTFTGTITVTVDQVLSNGNLHVVGEKQIEI 175
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + +G+V P+ + A N+V +A+ARI Y G G E + N+SP
Sbjct: 176 NQGTEFIRFSGVVNPRTISASNAVLSTAVADARIEYVGNGYINEAQNMGWLQRFFLNISP 235
>gi|238751765|ref|ZP_04613253.1| Flagellar L-ring protein [Yersinia rohdei ATCC 43380]
gi|238710036|gb|EEQ02266.1| Flagellar L-ring protein [Yersinia rohdei ATCC 43380]
Length = 238
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSY 61
R+ L LL GC P S +D + + P + S ++
Sbjct: 13 RWVGAPLVAMLLLNGCA-----------YIPHKSLVDGKTSAQPAPASAPLPNGSIFQAA 61
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ LF+D R NVGD LT+ ++ + A + SRN + ++
Sbjct: 62 QPMNYGYQPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGASKFGVATSPRYLDG 121
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 122 LLGNARADMDISGDSTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQIAINQGT 181
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV ++A+ARI Y G G E + N+SP
Sbjct: 182 EFIRFSGVVNPRTISGSNSVISTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 237
>gi|332994159|gb|AEF04214.1| flagellar basal body L-ring protein [Alteromonas sp. SN2]
Length = 214
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 18/228 (7%)
Query: 15 LFGCHSSISEI--TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAAL 71
+ GC S+ P +P+ + + SL+R +L
Sbjct: 1 MAGCASTNQPPVQANDPSFAPVVPDY--------------PREKIVEDGSLFRSYMANSL 46
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
+ D A VGDI+T+ + + A T S++ ++ G + L
Sbjct: 47 YSDMTARRVGDIITITLSENTNASKSAGTSTSKDTTVDLDTITGLGGQPLNIGGQSVQLG 106
Query: 132 YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
G + +++ L+ I+ V +L N NL+I G + + +N + +TGI+R
Sbjct: 107 VSSSNEFEGDAATNQSNSLSGNISVTVVEVLPNDNLVIRGEKWLTLNHGDEYIRLTGIIR 166
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI-ENLSPL 238
D+ N V KIA ARI Y G G + + PL
Sbjct: 167 LSDISPENEVLSTKIANARIQYSGTGSFASAQEKGWLTKFFTSSWWPL 214
>gi|167626158|ref|YP_001676452.1| flagellar basal body L-ring protein [Shewanella halifaxensis
HAW-EB4]
gi|167356180|gb|ABZ78793.1| flagellar L-ring protein [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ + LL GC + I E P + + + S ++ S++R
Sbjct: 10 IGLTLLLSGCVAHIPEPDTAP------------GKPEWAPPEIDYSLPDAENGSVYRPGF 57
Query: 69 A-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
LFKD RA GDILTV + + T S++ + T +
Sbjct: 58 MLTLFKDKRAYREGDILTVALDEKTYSSKRADTKTSKSGGVSID-----GQGTTGTSSIA 112
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
G+ + G + +G GS ++ +L+ I V +L NG L+I G + +R+N L +
Sbjct: 113 GSGEANMGRSFNGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQGDEYLRLL 172
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
G++R D+D N++S +IA+ARI YGG+G ++ R + + PL
Sbjct: 173 GLIRADDIDNDNTISSQRIADARIIYGGQGAISDSNRMGWAARYFNSPWFPL 224
>gi|237653580|ref|YP_002889894.1| flagellar L-ring protein [Thauera sp. MZ1T]
gi|237624827|gb|ACR01517.1| flagellar L-ring protein [Thauera sp. MZ1T]
Length = 225
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 91/232 (39%), Gaps = 16/232 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I + +LL GC + + ++ P + + + ++++
Sbjct: 8 IAVGLLALLSGCAA-------------IQTTPPSAVHQPMSVRPEAMATALPGNGAIYQT 54
Query: 67 -SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
LF+D RA +GD +T+++ + A +RN ++ + L
Sbjct: 55 VQARPLFEDRRARRIGDTITINLVERNTAEKSANANATRNGNMSAGIGPINRLPLSGLNG 114
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ L D +GKG+ + N I V + NGNL++SG + V +N +
Sbjct: 115 L--ELEADAESDFNGKGAAAANNVFNGTITVTVIDVYPNGNLLVSGEKMVAINQGNEFIR 172
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G++ P V N+V ++A+ARI Y G G E + + P
Sbjct: 173 FSGVINPNTVTTANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIMP 224
>gi|254433426|ref|ZP_05046934.1| flagellar L-ring protein FlgH [Nitrosococcus oceani AFC27]
gi|207089759|gb|EDZ67030.1| flagellar L-ring protein FlgH [Nitrosococcus oceani AFC27]
Length = 255
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 28/249 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ + GC + + P + +
Sbjct: 22 MNIKKIVLGIAGFFITGCAAQLPP--PDPSFAATRP--------------VATPPPQPNN 65
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-- 117
+++ + +LF D RA +GD++TV + A + T R+ S
Sbjct: 66 GAIYHAGYEISLFTDYRARQIGDVITVVLEERTDAEKGSDTAIDRDTSYSLTNPTLLGSG 125
Query: 118 --------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
L + + GA SG G S+ +LN I V +L NGNL+I
Sbjct: 126 VQFNTPNWLPLASNQDNSLEMAVKAKGAFSGGGDSSQNNRLNGHITVTVAEVLPNGNLVI 185
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G + V +N + ++GIV +D+ N+VS K+A+AR++Y G G T E R
Sbjct: 186 RGEKVVTINHGNEYIKISGIVNRRDIKPDNTVSSLKLADARLAYVGDGATHEANRMGWLS 245
Query: 230 QLIEN-LSP 237
+ + P
Sbjct: 246 RFFFSRFMP 254
>gi|296102905|ref|YP_003613051.1| lagellar L-ring protein precursor FlgH [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057364|gb|ADF62102.1| lagellar L-ring protein precursor FlgH [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295096222|emb|CBK85312.1| Flagellar basal body L-ring protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 235
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I+ + L GC S+ P+ P G + S ++
Sbjct: 14 ILTVLAVTLSGCAWIPSK--------PLVQGA--TTAQPVPGPAPVVNGSIFQTAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R NVGD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNVGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGTNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|161503732|ref|YP_001570844.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865079|gb|ABX21702.1| hypothetical protein SARI_01817 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 235
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC S+ P+ P G + S
Sbjct: 4 MQKYALHAYPLMALVVATLTGCAWIPSK--------PLVQGA--TTAQPIPGPVPVANGS 53
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 54 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 113
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 114 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 174 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 233
Query: 237 PL 238
P+
Sbjct: 234 PM 235
>gi|330899407|gb|EGH30826.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330943211|gb|EGH45618.1| flagellar basal body L-ring protein [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330975979|gb|EGH76045.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 237
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + S+N++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKNSNNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|323136550|ref|ZP_08071631.1| flagellar L-ring protein [Methylocystis sp. ATCC 49242]
gi|322397867|gb|EFY00388.1| flagellar L-ring protein [Methylocystis sp. ATCC 49242]
Length = 242
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 11/230 (4%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
GC + + T P M+P+GS L+ ++ ++ ++ LF D
Sbjct: 15 TGCATDPRDFTREPHMTPVGSGLNFHDDQI---PVGALQNAVLGPGMRIDENRVNLFHDI 71
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL----- 130
RA+NVGD++TV I ++D+A+ N T RSR + K + L N
Sbjct: 72 RAMNVGDVVTVVIEMNDRAILGNSTDRSREAKIKSKWTFLLDLVPMLGGPTNSQTKQTGA 131
Query: 131 ---NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+ D + G+G+I+R+E++ +AA+VTA+L NGNL++ GSQE+RVN E+R L++
Sbjct: 132 WQNDIDSSTETQGQGTINRSEQIRFTLAAVVTAVLPNGNLVLHGSQEIRVNQELRVLSIG 191
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
G+ RP+D++ NS++YDKIAEAR+SYGG+GR TE+ +P G QL + P
Sbjct: 192 GVARPRDINKDNSINYDKIAEARVSYGGRGRLTEVQQPAWGQQLYDTFVP 241
>gi|325923277|ref|ZP_08184950.1| flagellar basal body L-ring protein [Xanthomonas gardneri ATCC
19865]
gi|325546204|gb|EGD17385.1| flagellar basal body L-ring protein [Xanthomonas gardneri ATCC
19865]
Length = 230
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ L S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LALACSALLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ + A T S+ +++ +
Sbjct: 57 GPGLNLYGDRRARDVGDLLTVNLVENTTASSTANTSISKADTVDMSTPTLLGVPLTVNGT 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 DVLRNSTSGDRSFDGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADISPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|320179220|gb|EFW54178.1| Flagellar L-ring protein FlgH [Shigella boydii ATCC 9905]
Length = 232
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|117926377|ref|YP_866994.1| flagellar L-ring protein [Magnetococcus sp. MC-1]
gi|117610133|gb|ABK45588.1| flagellar L-ring protein [Magnetococcus sp. MC-1]
Length = 232
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 22/242 (9%)
Query: 1 MYRYSFIVLCYSS-LLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + +V + LL GC + S+ PQ +
Sbjct: 3 MNVQTMVVGVLALGLLSGCGMTRSSQRPPAPQ---------------AIIQAQPAEMLNP 47
Query: 59 KSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW LF D++A VGD++TV++ A + T R L G F
Sbjct: 48 NKGSLWNSGGRNTLFADAKARFVGDLITVNVSESSSAKKNAMTELKREADSEVALGGLFG 107
Query: 118 LF----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
L ++ + + G+G+ SR I VT +L NGNL I G +
Sbjct: 108 LTEALQKGGLSKLVDSNSTTSNQNHKGEGTTSRDSTFTATITCQVTEVLSNGNLRIEGRR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
++ VN E + + ++G++RP+D+ NSV+ +IA+ARI Y G+G + +P Q
Sbjct: 168 DITVNHENQFIILSGVIRPEDISNTNSVNSAQIADARIDYSGEGVLDDQQQPSWLQQFFT 227
Query: 234 NL 235
Sbjct: 228 TF 229
>gi|308273546|emb|CBX30148.1| hypothetical protein N47_D29570 [uncultured Desulfobacterium sp.]
Length = 240
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 18/247 (7%)
Query: 1 MYRYSFIVLCYSSLL-FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + LC +L GC + I + E + K
Sbjct: 1 MIPKNIAALCIIIVLISGCSAGSQYIKQAAK--------TEVKSTAGDQAPYAYQPPEKS 52
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF-- 116
SLW +S + LF D RA VGD++ V I D +A + T +R++S + KL
Sbjct: 53 EGSLWSESEGSFLFPDRRARRVGDLVIVRIVEDPEAELNANTSTNRSSSANAKLEFLGYM 112
Query: 117 ------SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ Q P + + G G+GS R + ++A+V + NGN++IS
Sbjct: 113 KALAQKNPNLAQNPGTDDLITASLGTKFDGQGSSDRDGHVKAYVSAVVLQVFPNGNMLIS 172
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G +EV+VN E + ++GIVR +D+ N VS +AEA+ISY GKG + RP
Sbjct: 173 GRREVKVNSETEYITLSGIVRAEDISTANEVSSAYVAEAKISYSGKGPVADKQRPGWLMG 232
Query: 231 LIENLSP 237
+I+ + P
Sbjct: 233 VIDYVWP 239
>gi|88911317|sp|Q7N5M7|FLGH_PHOLL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 229
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 92/242 (38%), Gaps = 22/242 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + L GC + + + +
Sbjct: 3 NKWRCSIALAVLSLTGCA----------------YIPQKPLVEGATTAAPSVATAPVPNG 46
Query: 62 SLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++++ + LF+D R N+GD LT+ ++ + A ++ SRN +
Sbjct: 47 AIFQVVQPVYYGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKNTFSAALT 106
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L+ + GKG + I V +L NGNL + G +++
Sbjct: 107 PRFLKGLIGGDKTDLDMEAENTFGGKGGANANNTFKGTITVTVDRLLANGNLHVVGEKQI 166
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+N + +G+V P+ ++A+N+VS +++A+ARI Y G G E + N+
Sbjct: 167 AINQGTEFIRFSGVVNPRTINANNTVSSNQVADARIEYVGNGYINEAQNMGWLQRFFLNV 226
Query: 236 SP 237
+P
Sbjct: 227 AP 228
>gi|71736849|ref|YP_275558.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257484943|ref|ZP_05638984.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|110816535|sp|Q48GC5|FLGH_PSE14 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|71557402|gb|AAZ36613.1| flagellar L-ring protein FlgH [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320325097|gb|EFW81166.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329356|gb|EFW85349.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880530|gb|EGH14679.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330986472|gb|EGH84575.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011046|gb|EGH91102.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 237
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRISVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + +++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMTKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|306814072|ref|ZP_07448245.1| flagellar basal body L-ring protein [Escherichia coli NC101]
gi|305852709|gb|EFM53157.1| flagellar basal body L-ring protein [Escherichia coli NC101]
Length = 232
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+VS ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVSSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|220934397|ref|YP_002513296.1| flagellar L-ring protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995707|gb|ACL72309.1| flagellar L-ring protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 229
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 18 CHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDS 75
C S + + P+ S + + + + ++++ S+ LF+D
Sbjct: 25 CASVNGVKPGDSPEFSAVNPPM--------------PVPAEYNNGAIFQASYGTGLFEDY 70
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG 135
+A VGDILTV + QA T S+ +S++ + + + + +G
Sbjct: 71 KARRVGDILTVRLAERTQARKSANTSTSKESSVNMPTPTVLNRTIPEL-----STSIEGS 125
Query: 136 GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDV 195
+ G G +++ +L+ I +V +L NGNL++ G + +R+N + + GIVRP DV
Sbjct: 126 RSFDGAGDSAQSNQLDGSITVMVAEVLPNGNLVVQGEKWIRINQGQEFIRLRGIVRPVDV 185
Query: 196 DAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
A N++ +IA A+++YGG G + P + + + P
Sbjct: 186 RADNTILSTQIANAQVAYGGSGTLADSNSPGWLTRFFNSPVWP 228
>gi|238752864|ref|ZP_04614329.1| Flagellar L-ring protein 1 [Yersinia rohdei ATCC 43380]
gi|238708903|gb|EEQ01156.1| Flagellar L-ring protein 1 [Yersinia rohdei ATCC 43380]
Length = 211
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 22/230 (9%)
Query: 12 SSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA- 69
+L GC + + ++ +P + + + + L++ ++
Sbjct: 1 MLVLSGCETPVLQVHKDDAAFAPPANLVQQTTVK--------------EGGGLFQPAYNW 46
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN 129
+L +D RA VGDILTV + Q+ +T + N + + +
Sbjct: 47 SLLQDRRAYRVGDILTVKLDESTQSSKQAKTNFGKKNEMSLGIPEILGKKLNKLGG---- 102
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+ G G + ++ L I V +L NG L+I G + + +N + VTG+
Sbjct: 103 -SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMRVTGL 161
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
VR DV+ NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 162 VRADDVERDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 211
>gi|255021357|ref|ZP_05293405.1| Flagellar L-ring protein FlgH [Acidithiobacillus caldus ATCC 51756]
gi|254969220|gb|EET26734.1| Flagellar L-ring protein FlgH [Acidithiobacillus caldus ATCC 51756]
Length = 245
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+L L C G + P+ + + + ++ + ++W+D
Sbjct: 21 LLLAVLYLSACA---EMGGGHRNLKPLQP--------LAIPAEPASLNAHPANGAIWQDG 69
Query: 68 HA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL----FGQQ 122
+LF D+RA VGD++TV I+ + A + T + ++SL L+ F +
Sbjct: 70 TNVSLFSDNRANRVGDLITVLIQENSSASNNTNTAINTSDSLSAALTNFFGITPAFGSVA 129
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ ++ G G G+ +++ + A V ++ NGNL+I GS+EV +N
Sbjct: 130 GKAFSPSMGATSGQKYGGTGATTQSNTFTATLEATVVRVMGNGNLVIEGSKEVMLNGGHE 189
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ V G+VR DV N+V +IA+AR+ Y G G R P + +L P
Sbjct: 190 FIRVAGVVRAADVTPQNTVYSTQIADARVEYSGDGTIYSAARMPWLARFFLSLWP 244
>gi|330875987|gb|EGH10136.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 237
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYR-------YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRPGFPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + +++++ L
Sbjct: 46 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMTKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYTGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 SVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|114320060|ref|YP_741743.1| flagellar L-ring protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226454|gb|ABI56253.1| flagellar L-ring protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 224
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 22/240 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ ++ F+ L ++ L GC +P +P L E + +
Sbjct: 5 LIKWLFMALAVTA-LAGCAG-------MPDQAPKPLPLPEIA-----------EPERQNN 45
Query: 61 YSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ LF+D R+ VGD++TV + A N + ++++S
Sbjct: 46 GAIYQAGGEQRLFEDRRSRRVGDVITVLFEENTDASKSNSSSMTKSSSAELPAPTVAG-R 104
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G + + + SG G+ ++ +L + AIVT + NG L+I G +++ +N
Sbjct: 105 GATRGGVPLEFDAQADRSFSGDGAADQSNQLTGTLTAIVTDTMPNGYLVIEGQKKLTLNQ 164
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ ++GIVRP DV A N+VS ++A A+I+Y G G + RP ++ + PL
Sbjct: 165 GAEYVTISGIVRPDDVGADNTVSSLRVANAQIAYTGTGALADSNRPGWLTRVFNSRWWPL 224
>gi|307131606|ref|YP_003883622.1| flagellar L-ring protein flgH [Dickeya dadantii 3937]
gi|306529135|gb|ADM99065.1| Flagellar L-ring protein flgH [Dickeya dadantii 3937]
Length = 240
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 10/235 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R + L GC + P + + S ++
Sbjct: 15 RPRLLAYVMMLTLSGCAYIPHDKV----------VTGPTTAQPAPPLQAIPNGSIFQTGQ 64
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ +F+D R NVGD LT+ ++ + A + SR+ S ++ L
Sbjct: 65 AMNYGYQPMFEDRRPRNVGDTLTIVLQENVSASKSSSANASRDASGSFGMTTTPRLLEGP 124
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
N G +GKG + I V +L NGNL + G +++ VN
Sbjct: 125 LGNNRAAFNATGKDDFTGKGGANANNTFTGTITVTVDQVLTNGNLHVVGEKQIAVNQGTE 184
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V ++A+AR+ Y G G E + N+SP
Sbjct: 185 FIRFSGVVNPRTISGSNTVPSTQVADARMEYVGNGYINETQTMGWLQRFFLNVSP 239
>gi|78047583|ref|YP_363758.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|110816547|sp|Q3BU05|FLGH_XANC5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|78036013|emb|CAJ23704.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 230
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LAIACSALLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 S-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 57 GPSLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMGAPTLLGAPLTVGGL 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 NVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|281178188|dbj|BAI54518.1| flagellar basal-body L-ring protein FlgH [Escherichia coli SE15]
gi|330910893|gb|EGH39403.1| flagellar L-ring protein FlgH [Escherichia coli AA86]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I + L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLALSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|238799110|ref|ZP_04642566.1| Flagellar L-ring protein [Yersinia mollaretii ATCC 43969]
gi|238717057|gb|EEQ08917.1| Flagellar L-ring protein [Yersinia mollaretii ATCC 43969]
Length = 237
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 12/229 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ LL GC P S +D + P + S ++ +
Sbjct: 19 LTAMLLNGCA-----------YIPHKSLVDGTTSAQPAPASAPLPNGSIFQAAQPMNYGY 67
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 68 QPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEGLLGNARA 127
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+++ G GKG + + I V +L NGNL + G +++ +N + +G
Sbjct: 128 DMDISGDNTFGGKGGANANNTFSGTITVTVDRVLANGNLHVVGEKQIAINQGTEFIRFSG 187
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 VVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNISP 236
>gi|311280014|ref|YP_003942245.1| flagellar L-ring protein [Enterobacter cloacae SCF1]
gi|308749209|gb|ADO48961.1| flagellar L-ring protein [Enterobacter cloacae SCF1]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 11/237 (4%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+RY FI + + GC S+ P+ P G + S ++
Sbjct: 7 FRYPFI-VALALTQAGCAWIPSK--------PLVEGA--TTAQPIPGPMPTANGSIYQTA 55
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ LF+D R N+GD LT+ ++ + A + SR+ + S
Sbjct: 56 QPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFSTVPRYLEG 115
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+++ GG +GKG + + + + V +L NGNL + G +++ +N
Sbjct: 116 LFGNARADVDASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGT 175
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 176 EFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|146311249|ref|YP_001176323.1| flagellar basal body L-ring protein [Enterobacter sp. 638]
gi|145318125|gb|ABP60272.1| flagellar L-ring protein [Enterobacter sp. 638]
Length = 235
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
IV + L GC S+ P+ P G + S ++
Sbjct: 14 IVTVLAVTLSGCALIPSK--------PLVQGA--TTAQPIPGPTPVVNGSIFQTAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIQLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG + +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|218700418|ref|YP_002408047.1| flagellar basal body L-ring protein [Escherichia coli IAI39]
gi|226701920|sp|B7NL55|FLGH_ECO7I RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|218370404|emb|CAR18211.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli IAI39]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPAPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|89072312|ref|ZP_01158891.1| flagellar L-ring protein precursor [Photobacterium sp. SKA34]
gi|89051844|gb|EAR57296.1| flagellar L-ring protein precursor [Photobacterium sp. SKA34]
Length = 222
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 18/225 (8%)
Query: 13 SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AAL 71
S + GC I P N F D S K SL+R ++ L
Sbjct: 12 SFVSGCSVREEFIPPEP------------NDAAFAPPDLDYSLPEAKHGSLYRHNYSMTL 59
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
F+D RA VGD+LTV++ Q+ T +++S+ + + +
Sbjct: 60 FQDRRAYRVGDVLTVELDEQTQSSKKANTKFGKSSSIEFAAPTL-----GNKTFDDLSAS 114
Query: 132 YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
G G + ++ KL I V +L NG L+I G + +R+N + +TG+VR
Sbjct: 115 VSGDRGFDGTAASTQGNKLQGAITVTVHKVLPNGVLMIRGEKWIRLNQGDEYIRLTGVVR 174
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
DV+ HN VS +I +ARI+Y G+G + Q +
Sbjct: 175 VDDVNRHNQVSSQRIGDARITYSGRGALADSNAAGWLTQFFTSPW 219
>gi|149191156|ref|ZP_01869414.1| flagellar L-ring protein precursor [Vibrio shilonii AK1]
gi|148834994|gb|EDL51973.1| flagellar L-ring protein precursor [Vibrio shilonii AK1]
Length = 247
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 17/234 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
Y +V + GC E N + + + SL
Sbjct: 27 YIAVVALLVVNMIGCAGRQDEFIP-----------PSPNDEAYAPPELDYQVTRVSKGSL 75
Query: 64 WRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ + A LF+D RA VGDILTV + ++ T +++S
Sbjct: 76 YTGTTAMTLFQDRRAYRVGDILTVMLDEKTESDKSASTQYGKDSSATIAAPTL-----GT 130
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
T G+ D G + ++ L+ I V +L NG L + G + +++N
Sbjct: 131 TTYAEGSAAIDATRDFDGAAASTQGNSLSGSITVTVYDVLPNGVLRVRGEKWLKLNQGDE 190
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG VR D+ A N++S +IA+ARI+Y G+G + Q +
Sbjct: 191 YIRLTGNVRVDDIQADNTLSSQRIADARITYAGRGTFADTNTAGWLTQFFNSPW 244
>gi|331017021|gb|EGH97077.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 237
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYR-------YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + + P +P+
Sbjct: 1 MNRPGFPRFSVLIASLCGITLLSGCVA-PAAKPNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + S++++ L
Sbjct: 46 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMSKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ + Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLSAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 SVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|209773348|gb|ACI84986.1| flagellar basal body L-ring protein FlgH [Escherichia coli]
gi|320643091|gb|EFX12292.1| flagellar basal body L-ring protein [Escherichia coli O157:H- str.
493-89]
gi|320648549|gb|EFX17204.1| flagellar basal body L-ring protein [Escherichia coli O157:H- str.
H 2687]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSASASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|15801196|ref|NP_287213.1| flagellar basal body L-ring protein [Escherichia coli O157:H7
EDL933]
gi|15830711|ref|NP_309484.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
Sakai]
gi|16129042|ref|NP_415597.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K-12 substr. MG1655]
gi|30062615|ref|NP_836786.1| flagellar basal body L-ring protein [Shigella flexneri 2a str.
2457T]
gi|56479816|ref|NP_706997.2| flagellar basal body L-ring protein [Shigella flexneri 2a str. 301]
gi|74311640|ref|YP_310059.1| flagellar basal body L-ring protein [Shigella sonnei Ss046]
gi|89107925|ref|AP_001705.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K-12 substr. W3110]
gi|157155075|ref|YP_001462313.1| flagellar basal body L-ring protein [Escherichia coli E24377A]
gi|157160606|ref|YP_001457924.1| flagellar basal body L-ring protein [Escherichia coli HS]
gi|168747145|ref|ZP_02772167.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4113]
gi|168758628|ref|ZP_02783635.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4401]
gi|168764491|ref|ZP_02789498.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4501]
gi|168767738|ref|ZP_02792745.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4486]
gi|168773924|ref|ZP_02798931.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4196]
gi|168783609|ref|ZP_02808616.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4076]
gi|168790014|ref|ZP_02815021.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. EC869]
gi|168802024|ref|ZP_02827031.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. EC508]
gi|170080730|ref|YP_001730050.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K-12 substr. DH10B]
gi|188495438|ref|ZP_03002708.1| flagellar L-ring protein FlgH [Escherichia coli 53638]
gi|191172379|ref|ZP_03033920.1| flagellar L-ring protein FlgH [Escherichia coli F11]
gi|193064518|ref|ZP_03045598.1| flagellar L-ring protein FlgH [Escherichia coli E22]
gi|193069519|ref|ZP_03050473.1| flagellar L-ring protein FlgH [Escherichia coli E110019]
gi|194438092|ref|ZP_03070185.1| flagellar L-ring protein FlgH [Escherichia coli 101-1]
gi|195935469|ref|ZP_03080851.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
EC4024]
gi|208807280|ref|ZP_03249617.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4206]
gi|208816016|ref|ZP_03257195.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4045]
gi|208822634|ref|ZP_03262953.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4042]
gi|209398398|ref|YP_002269925.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4115]
gi|209918333|ref|YP_002292417.1| flagellar basal body L-ring protein [Escherichia coli SE11]
gi|217328301|ref|ZP_03444383.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
TW14588]
gi|218553657|ref|YP_002386570.1| flagellar basal body L-ring protein [Escherichia coli IAI1]
gi|218557961|ref|YP_002390874.1| flagellar basal body L-ring protein [Escherichia coli S88]
gi|218689032|ref|YP_002397244.1| flagellar basal body L-ring protein [Escherichia coli ED1a]
gi|218694613|ref|YP_002402280.1| flagellar basal body L-ring protein [Escherichia coli 55989]
gi|218704487|ref|YP_002412006.1| flagellar basal body L-ring protein [Escherichia coli UMN026]
gi|238900333|ref|YP_002926129.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli BW2952]
gi|254161185|ref|YP_003044293.1| flagellar basal body L-ring protein [Escherichia coli B str.
REL606]
gi|254792461|ref|YP_003077298.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
TW14359]
gi|256018664|ref|ZP_05432529.1| flagellar basal body L-ring protein [Shigella sp. D9]
gi|256023223|ref|ZP_05437088.1| flagellar basal body L-ring protein [Escherichia sp. 4_1_40B]
gi|260843319|ref|YP_003221097.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O103:H2 str. 12009]
gi|260854562|ref|YP_003228453.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O26:H11 str. 11368]
gi|260867442|ref|YP_003233844.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O111:H- str. 11128]
gi|261227016|ref|ZP_05941297.1| flagellar L-ring protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256250|ref|ZP_05948783.1| flagellar L-ring protein [Escherichia coli O157:H7 str. FRIK966]
gi|291282099|ref|YP_003498917.1| Flagellar L-ring protein precursor [Escherichia coli O55:H7 str.
CB9615]
gi|293404363|ref|ZP_06648357.1| flagellar L-ring protein [Escherichia coli FVEC1412]
gi|293414372|ref|ZP_06657021.1| flagellar L-ring protein FlgH [Escherichia coli B185]
gi|293433369|ref|ZP_06661797.1| flagellar L-ring protein FlgH [Escherichia coli B088]
gi|297516690|ref|ZP_06935076.1| flagellar basal body L-ring protein [Escherichia coli OP50]
gi|298380143|ref|ZP_06989748.1| flagellar L-ring protein [Escherichia coli FVEC1302]
gi|307137714|ref|ZP_07497070.1| flagellar basal body L-ring protein [Escherichia coli H736]
gi|307310143|ref|ZP_07589793.1| flagellar L-ring protein [Escherichia coli W]
gi|309788148|ref|ZP_07682754.1| flagellar L-ring family protein [Shigella dysenteriae 1617]
gi|312968847|ref|ZP_07783054.1| flagellar L-ring family protein [Escherichia coli 2362-75]
gi|312971216|ref|ZP_07785394.1| flagellar L-ring family protein [Escherichia coli 1827-70]
gi|331657141|ref|ZP_08358103.1| flagellar L-ring protein FlgH [Escherichia coli TA206]
gi|331667479|ref|ZP_08368343.1| flagellar L-ring protein FlgH [Escherichia coli TA271]
gi|331682581|ref|ZP_08383200.1| flagellar L-ring protein FlgH [Escherichia coli H299]
gi|62288091|sp|P0A6S0|FLGH_ECOLI RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|62288092|sp|P0A6S1|FLGH_ECO57 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|62288093|sp|P0A6S2|FLGH_SHIFL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|110816543|sp|Q3Z338|FLGH_SHISS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166988327|sp|A7ZKI4|FLGH_ECO24 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166988328|sp|A7ZZ37|FLGH_ECOHS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701918|sp|B7MJ67|FLGH_ECO45 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701919|sp|B5YVU9|FLGH_ECO5E RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701921|sp|B7M955|FLGH_ECO8A RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701922|sp|B1X9J2|FLGH_ECODH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701923|sp|B6I9F5|FLGH_ECOSE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789281|sp|B7LG13|FLGH_ECO55 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789282|sp|B7MTL0|FLGH_ECO81 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|259645994|sp|C4ZS19|FLGH_ECOBW RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|12514620|gb|AAG55825.1|AE005318_2 flagellar biosynthesis, basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Escherichia
coli O157:H7 str. EDL933]
gi|1787319|gb|AAC74163.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K-12 substr. MG1655]
gi|13360921|dbj|BAB34880.1| flagellar basal body L-ring protein FlgH [Escherichia coli O157:H7
str. Sakai]
gi|30040861|gb|AAP16592.1| flagellar basal body L-ring protein FlgH [Shigella flexneri 2a str.
2457T]
gi|56383367|gb|AAN42704.2| flagellar basal body L-ring protein FlgH [Shigella flexneri 2a str.
301]
gi|73855117|gb|AAZ87824.1| flagellar protein for basal-body outer-membrane L ring [Shigella
sonnei Ss046]
gi|85674831|dbj|BAA35888.2| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K12 substr. W3110]
gi|157066286|gb|ABV05541.1| flagellar L-ring protein FlgH [Escherichia coli HS]
gi|157077105|gb|ABV16813.1| flagellar L-ring protein FlgH [Escherichia coli E24377A]
gi|169888565|gb|ACB02272.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli str. K-12 substr. DH10B]
gi|187770494|gb|EDU34338.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4196]
gi|188018204|gb|EDU56326.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4113]
gi|188490637|gb|EDU65740.1| flagellar L-ring protein FlgH [Escherichia coli 53638]
gi|188999115|gb|EDU68101.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4076]
gi|189354588|gb|EDU73007.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4401]
gi|189363176|gb|EDU81595.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4486]
gi|189365530|gb|EDU83946.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4501]
gi|189370490|gb|EDU88906.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. EC869]
gi|189375945|gb|EDU94361.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. EC508]
gi|190907263|gb|EDV66861.1| flagellar L-ring protein FlgH [Escherichia coli F11]
gi|192927770|gb|EDV82384.1| flagellar L-ring protein FlgH [Escherichia coli E22]
gi|192957267|gb|EDV87716.1| flagellar L-ring protein FlgH [Escherichia coli E110019]
gi|194423028|gb|EDX39022.1| flagellar L-ring protein FlgH [Escherichia coli 101-1]
gi|208727081|gb|EDZ76682.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4206]
gi|208732664|gb|EDZ81352.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4045]
gi|208738119|gb|EDZ85802.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4042]
gi|209159798|gb|ACI37231.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC4115]
gi|209773350|gb|ACI84987.1| flagellar basal body L-ring protein FlgH [Escherichia coli]
gi|209773352|gb|ACI84988.1| flagellar basal body L-ring protein FlgH [Escherichia coli]
gi|209773354|gb|ACI84989.1| flagellar basal body L-ring protein FlgH [Escherichia coli]
gi|209773356|gb|ACI84990.1| flagellar basal body L-ring protein FlgH [Escherichia coli]
gi|209911592|dbj|BAG76666.1| flagellar basal-body L-ring protein FlgH [Escherichia coli SE11]
gi|217318728|gb|EEC27154.1| flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
TW14588]
gi|218351345|emb|CAU97051.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli 55989]
gi|218360425|emb|CAQ97979.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli IAI1]
gi|218364730|emb|CAR02420.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli S88]
gi|218426596|emb|CAR07424.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli ED1a]
gi|218431584|emb|CAR12463.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli UMN026]
gi|222032832|emb|CAP75571.1| flagellar L-ring protein [Escherichia coli LF82]
gi|238861116|gb|ACR63114.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli BW2952]
gi|242376883|emb|CAQ31600.1| flagellar L-ring protein FlgH; basal-body outer-membrane L
(lipopolysaccharide layer) ring protein, subunit of
Flagellar Motor Complex and Flagellum [Escherichia coli
BL21(DE3)]
gi|253973086|gb|ACT38757.1| flagellar L-ring protein precursor H [Escherichia coli B str.
REL606]
gi|253977300|gb|ACT42970.1| flagellar L-ring protein precursor H [Escherichia coli BL21(DE3)]
gi|254591861|gb|ACT71222.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli O157:H7 str. TW14359]
gi|257753211|dbj|BAI24713.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O26:H11 str. 11368]
gi|257758466|dbj|BAI29963.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O103:H2 str. 12009]
gi|257763798|dbj|BAI35293.1| flagellar protein FlgH of basal-body outer-membrane L ring
[Escherichia coli O111:H- str. 11128]
gi|290761972|gb|ADD55933.1| Flagellar L-ring protein precursor [Escherichia coli O55:H7 str.
CB9615]
gi|291324188|gb|EFE63610.1| flagellar L-ring protein FlgH [Escherichia coli B088]
gi|291428949|gb|EFF01974.1| flagellar L-ring protein [Escherichia coli FVEC1412]
gi|291434430|gb|EFF07403.1| flagellar L-ring protein FlgH [Escherichia coli B185]
gi|294491179|gb|ADE89935.1| flagellar L-ring protein FlgH [Escherichia coli IHE3034]
gi|298279841|gb|EFI21349.1| flagellar L-ring protein [Escherichia coli FVEC1302]
gi|306909861|gb|EFN40355.1| flagellar L-ring protein [Escherichia coli W]
gi|307627451|gb|ADN71755.1| flagellar basal body L-ring protein [Escherichia coli UM146]
gi|308924000|gb|EFP69501.1| flagellar L-ring family protein [Shigella dysenteriae 1617]
gi|309701351|emb|CBJ00652.1| flagellar L-ring protein [Escherichia coli ETEC H10407]
gi|310336418|gb|EFQ01604.1| flagellar L-ring family protein [Escherichia coli 1827-70]
gi|312286249|gb|EFR14162.1| flagellar L-ring family protein [Escherichia coli 2362-75]
gi|312945641|gb|ADR26468.1| flagellar basal body L-ring protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|313650469|gb|EFS14876.1| flagellar L-ring family protein [Shigella flexneri 2a str. 2457T]
gi|315135711|dbj|BAJ42870.1| flagellar basal body L-ring protein [Escherichia coli DH1]
gi|315618249|gb|EFU98839.1| flagellar L-ring family protein [Escherichia coli 3431]
gi|320189762|gb|EFW64418.1| Flagellar L-ring protein FlgH [Escherichia coli O157:H7 str.
EC1212]
gi|320196439|gb|EFW71062.1| Flagellar L-ring protein FlgH [Escherichia coli WV_060327]
gi|320200975|gb|EFW75559.1| Flagellar L-ring protein FlgH [Escherichia coli EC4100B]
gi|320637530|gb|EFX07330.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
G5101]
gi|320653863|gb|EFX21937.1| flagellar basal body L-ring protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659343|gb|EFX26912.1| flagellar basal body L-ring protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664478|gb|EFX31629.1| flagellar basal body L-ring protein [Escherichia coli O157:H7 str.
LSU-61]
gi|323156886|gb|EFZ43020.1| flagellar L-ring family protein [Escherichia coli EPECa14]
gi|323163704|gb|EFZ49524.1| flagellar L-ring family protein [Escherichia coli E128010]
gi|323165589|gb|EFZ51376.1| flagellar L-ring family protein [Shigella sonnei 53G]
gi|323175234|gb|EFZ60847.1| flagellar L-ring family protein [Escherichia coli LT-68]
gi|323175690|gb|EFZ61284.1| flagellar L-ring family protein [Escherichia coli 1180]
gi|323185798|gb|EFZ71159.1| flagellar L-ring family protein [Escherichia coli 1357]
gi|323190591|gb|EFZ75863.1| flagellar L-ring family protein [Escherichia coli RN587/1]
gi|323379082|gb|ADX51350.1| flagellar L-ring protein [Escherichia coli KO11]
gi|323937819|gb|EGB34083.1| flagellar L-ring protein [Escherichia coli E1520]
gi|323942548|gb|EGB38715.1| flagellar L-ring protein [Escherichia coli E482]
gi|323947619|gb|EGB43623.1| flagellar L-ring protein [Escherichia coli H120]
gi|323953235|gb|EGB49101.1| flagellar L-ring protein [Escherichia coli H252]
gi|323957903|gb|EGB53615.1| flagellar L-ring protein [Escherichia coli H263]
gi|323962678|gb|EGB58256.1| flagellar L-ring protein [Escherichia coli H489]
gi|323967020|gb|EGB62446.1| flagellar L-ring protein [Escherichia coli M863]
gi|323973332|gb|EGB68521.1| flagellar L-ring protein [Escherichia coli TA007]
gi|323976548|gb|EGB71636.1| flagellar L-ring protein [Escherichia coli TW10509]
gi|324117350|gb|EGC11257.1| flagellar L-ring protein [Escherichia coli E1167]
gi|326339301|gb|EGD63115.1| Flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. 1125]
gi|326344738|gb|EGD68486.1| Flagellar L-ring protein FlgH [Escherichia coli O157:H7 str. 1044]
gi|327253478|gb|EGE65116.1| flagellar L-ring family protein [Escherichia coli STEC_7v]
gi|331055389|gb|EGI27398.1| flagellar L-ring protein FlgH [Escherichia coli TA206]
gi|331065064|gb|EGI36959.1| flagellar L-ring protein FlgH [Escherichia coli TA271]
gi|331080212|gb|EGI51391.1| flagellar L-ring protein FlgH [Escherichia coli H299]
gi|332342625|gb|AEE55959.1| flagellar L-ring family protein FlgH [Escherichia coli UMNK88]
gi|332758239|gb|EGJ88562.1| flagellar L-ring family protein [Shigella flexneri 4343-70]
gi|332759652|gb|EGJ89957.1| flagellar L-ring family protein [Shigella flexneri 2747-71]
gi|332761425|gb|EGJ91709.1| flagellar L-ring family protein [Shigella flexneri K-671]
gi|332767687|gb|EGJ97880.1| flagellar L-ring protein [Shigella flexneri 2930-71]
gi|333004889|gb|EGK24409.1| flagellar L-ring family protein [Shigella flexneri VA-6]
gi|333005370|gb|EGK24888.1| flagellar L-ring family protein [Shigella flexneri K-218]
gi|333019475|gb|EGK38758.1| flagellar L-ring family protein [Shigella flexneri K-304]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|28869145|ref|NP_791764.1| flagellar L-ring protein FlgH [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967578|ref|ZP_03395726.1| flagellar L-ring protein FlgH [Pseudomonas syringae pv. tomato T1]
gi|301385717|ref|ZP_07234135.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
tomato Max13]
gi|302060070|ref|ZP_07251611.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
tomato K40]
gi|302134829|ref|ZP_07260819.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|31076678|sp|Q884Z5|FLGH_PSESM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|28852385|gb|AAO55459.1| flagellar L-ring protein FlgH [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927879|gb|EEB61426.1| flagellar L-ring protein FlgH [Pseudomonas syringae pv. tomato T1]
Length = 237
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYR-------YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRPGFPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + S++++ L
Sbjct: 46 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMSKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ + Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLSAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 SVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|330972417|gb|EGH72483.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 237
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + S+N++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKNSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y G ++G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYTGARTTNGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|326628162|gb|EGE34505.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 4 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 53
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 54 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 113
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 114 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 174 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYLNEAQNMGWLQRFFLNLS 233
Query: 237 PL 238
P+
Sbjct: 234 PM 235
>gi|238785494|ref|ZP_04629477.1| Flagellar L-ring protein [Yersinia bercovieri ATCC 43970]
gi|238713596|gb|EEQ05625.1| Flagellar L-ring protein [Yersinia bercovieri ATCC 43970]
Length = 237
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 12/229 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ LL GC P S +D + P + S ++ +
Sbjct: 19 LTAMLLNGCA-----------YIPHKSLVDGTTSAQPAPASAPLPNGSIFQAAQPMNYGY 67
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 68 QPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEGLLGNARA 127
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+++ G GKG + + I V +L NGNL + G +++ +N + +G
Sbjct: 128 DMDISGDNTFGGKGGANANNTFSGTITVTVDRVLANGNLHVVGEKQIAINQGTEFIRFSG 187
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 VVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNISP 236
>gi|170681726|ref|YP_001744101.1| flagellar basal body L-ring protein [Escherichia coli SMS-3-5]
gi|331662485|ref|ZP_08363408.1| flagellar L-ring protein FlgH [Escherichia coli TA143]
gi|170519444|gb|ACB17622.1| flagellar L-ring protein FlgH [Escherichia coli SMS-3-5]
gi|331060907|gb|EGI32871.1| flagellar L-ring protein FlgH [Escherichia coli TA143]
Length = 232
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKSNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|91210231|ref|YP_540217.1| flagellar basal body L-ring protein [Escherichia coli UTI89]
gi|91071805|gb|ABE06686.1| flagellar basal body L-ring protein precursor [Escherichia coli
UTI89]
Length = 237
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 16 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 65
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 66 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 125
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 126 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 185
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 186 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 237
>gi|62179697|ref|YP_216114.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|200389737|ref|ZP_03216348.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357317|ref|ZP_02346782.2| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|62127330|gb|AAX65033.1| flagellar biosynthesis, basal-body outer-membrane L
(lipopolysaccharide layer) ring protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|199602182|gb|EDZ00728.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322411|gb|EDZ10250.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|320086380|emb|CBY96153.1| Flagellar L-ring protein 2 Basal body L-ring protein 2; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322714167|gb|EFZ05738.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129450|gb|ADX16880.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323252628|gb|EGA36466.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 4 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 53
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 54 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 113
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 114 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 174 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 233
Query: 237 PL 238
P+
Sbjct: 234 PM 235
>gi|331646337|ref|ZP_08347440.1| flagellar L-ring protein FlgH [Escherichia coli M605]
gi|331045089|gb|EGI17216.1| flagellar L-ring protein FlgH [Escherichia coli M605]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I + L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLALSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|288549492|ref|ZP_05967237.2| flagellar L-ring protein FlgH [Enterobacter cancerogenus ATCC
35316]
gi|288318180|gb|EFC57118.1| flagellar L-ring protein FlgH [Enterobacter cancerogenus ATCC
35316]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I+ + L GC S+ P+ P G + S ++
Sbjct: 14 ILTVLAVTLSGCAWIPSK--------PLVQGA--TTAQPVPGPAPIVNGSIFQTAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGTNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|23092318|gb|AAN08643.1| FlgH [Aeromonas hydrophila]
Length = 223
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 20/240 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ +++ + L GC S+ + P+ SP+ + + P +
Sbjct: 1 MKAIWMLGLLA--LGGCSSTPNTAKPDDPEFSPVYGESEPVSVRP--------------T 44
Query: 61 YSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ ++ D A VGDI+T+++ A T +++N L +
Sbjct: 45 GAIFQPDQVNCIYSDINAHRVGDIITIELAESTSASKKANTTAAQDNKLSLDQVSLGGVP 104
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
P + + + A G+ ++ L I+ V +L NGNLI+ G + + +N+
Sbjct: 105 VTAGP-YDLSASLGQNSAFKGQAKADQSNSLQGNISVSVAKVLPNGNLIVRGEKWIMLNN 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ +TG++RP+DV + NSVS ++A ARI YGG G PL
Sbjct: 164 GNEYIRITGMIRPEDVTSENSVSSQRVANARIHYGGTGDLANSQEHGWLTSFFNGPWWPL 223
>gi|282599764|ref|ZP_05971783.2| flagellar L-ring protein FlgH [Providencia rustigianii DSM 4541]
gi|282567731|gb|EFB73266.1| flagellar L-ring protein FlgH [Providencia rustigianii DSM 4541]
Length = 254
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 10/233 (4%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ L ++ GC + P + P + + +S
Sbjct: 31 RVVCLAAIVIISGCA----------HIKPRPLVDSQTTATPTAPTAPAPNGAIFQSAQPA 80
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ LF+D R NVGDILT++++ + A ++ +R+ +
Sbjct: 81 YYGYQPLFEDRRPRNVGDILTINLQENVSASKNSSANANRSGKTGFLAAILPGFMQGWLG 140
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
N ++ G +GKG + I V +L NGNL + G + + +N S+
Sbjct: 141 GSNTEIDVKGNSDFTGKGGANANNTFKGTITVTVDQLLANGNLHVVGEKRIAINQGTESI 200
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + A N+VS ++A+ARI Y G G E + N+SP
Sbjct: 201 RFSGVVNPRTIGADNNVSSTQVADARIEYVGDGYINESQTMGWLQRFFLNVSP 253
>gi|191168479|ref|ZP_03030267.1| flagellar L-ring protein FlgH [Escherichia coli B7A]
gi|190901498|gb|EDV61259.1| flagellar L-ring protein FlgH [Escherichia coli B7A]
Length = 232
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + N + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFNGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|332088745|gb|EGI93857.1| flagellar L-ring family protein [Shigella boydii 5216-82]
Length = 232
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNT 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|283850809|ref|ZP_06368095.1| flagellar L-ring protein [Desulfovibrio sp. FW1012B]
gi|283573732|gb|EFC21706.1| flagellar L-ring protein [Desulfovibrio sp. FW1012B]
Length = 241
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 33/255 (12%)
Query: 1 MYR-YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R F+++ L C + + +PQ++P + P
Sbjct: 1 MKRNTLFLLVLAGCSLAACAPASKKAAPMPQVTPTVAKAPPPAENP-------------- 46
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS----- 113
S++ + LF D+RA +GDILT++I ++ +T + S +
Sbjct: 47 -GSVFSQNQPTFLFDDTRARRIGDILTINIVDTSKSDLKAETKNDKTASNVLGVGSYFGN 105
Query: 114 -----------GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
GG + + + ++ + KG R + I + IL
Sbjct: 106 KDLAGNLSGQLGGPNFGMKGLVGSDPMVSTNTAEKFQSKGETKRESAVTAAIGCRIVNIL 165
Query: 163 ENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTEL 222
G + + G+++ RVN+E + + V G+VRP DV N+V ++A+ +I Y G+G +
Sbjct: 166 PGGVMQVEGARQTRVNNENQIIVVRGLVRPIDVGPDNTVPSTQLADCQIEYYGEGDLADR 225
Query: 223 LRPPIGHQLIENLSP 237
+ ++++N+ P
Sbjct: 226 QKSGWLTRILDNVWP 240
>gi|205353082|ref|YP_002226883.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|226701931|sp|B5RBC1|FLGH_SALG2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|205272863|emb|CAR37792.1| Flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
Length = 232
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 1 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 50
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 110
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 111 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 170
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 171 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYLNEAQNMGWLQRFFLNLS 230
Query: 237 PL 238
P+
Sbjct: 231 PM 232
>gi|110641255|ref|YP_668985.1| flagellar basal body L-ring protein [Escherichia coli 536]
gi|110805096|ref|YP_688616.1| flagellar basal body L-ring protein [Shigella flexneri 5 str. 8401]
gi|117623265|ref|YP_852178.1| flagellar basal body L-ring protein [Escherichia coli APEC O1]
gi|170020525|ref|YP_001725479.1| flagellar basal body L-ring protein [Escherichia coli ATCC 8739]
gi|237706935|ref|ZP_04537416.1| flagellar basal body L-ring protein [Escherichia sp. 3_2_53FAA]
gi|253773897|ref|YP_003036728.1| flagellar basal body L-ring protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|300821140|ref|ZP_07101289.1| flagellar L-ring protein FlgH [Escherichia coli MS 119-7]
gi|300899598|ref|ZP_07117837.1| flagellar L-ring protein FlgH [Escherichia coli MS 198-1]
gi|300902470|ref|ZP_07120452.1| flagellar L-ring protein FlgH [Escherichia coli MS 84-1]
gi|300918681|ref|ZP_07135262.1| flagellar L-ring protein FlgH [Escherichia coli MS 115-1]
gi|300922605|ref|ZP_07138705.1| flagellar L-ring protein FlgH [Escherichia coli MS 182-1]
gi|300928369|ref|ZP_07143903.1| flagellar L-ring protein FlgH [Escherichia coli MS 187-1]
gi|300950174|ref|ZP_07164119.1| flagellar L-ring protein FlgH [Escherichia coli MS 116-1]
gi|300954381|ref|ZP_07166835.1| flagellar L-ring protein FlgH [Escherichia coli MS 175-1]
gi|301023266|ref|ZP_07187063.1| flagellar L-ring protein FlgH [Escherichia coli MS 69-1]
gi|301304982|ref|ZP_07211084.1| flagellar L-ring protein FlgH [Escherichia coli MS 124-1]
gi|301328551|ref|ZP_07221612.1| flagellar L-ring protein FlgH [Escherichia coli MS 78-1]
gi|301644991|ref|ZP_07244957.1| flagellar L-ring protein FlgH [Escherichia coli MS 146-1]
gi|331641623|ref|ZP_08342758.1| flagellar L-ring protein FlgH [Escherichia coli H736]
gi|331652132|ref|ZP_08353151.1| flagellar L-ring protein FlgH [Escherichia coli M718]
gi|331676870|ref|ZP_08377566.1| flagellar L-ring protein FlgH [Escherichia coli H591]
gi|332279733|ref|ZP_08392146.1| flagellar basal body L-ring protein [Shigella sp. D9]
gi|110342847|gb|ABG69084.1| flagellar L-ring protein precursor [Escherichia coli 536]
gi|110614644|gb|ABF03311.1| flagellar L-ring protein precursor FlgH [Shigella flexneri 5 str.
8401]
gi|115512389|gb|ABJ00464.1| flagellar basal body L-ring protein precursor [Escherichia coli
APEC O1]
gi|169755453|gb|ACA78152.1| flagellar L-ring protein [Escherichia coli ATCC 8739]
gi|226898145|gb|EEH84404.1| flagellar basal body L-ring protein [Escherichia sp. 3_2_53FAA]
gi|253324941|gb|ACT29543.1| flagellar L-ring protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|260449781|gb|ACX40203.1| flagellar L-ring protein [Escherichia coli DH1]
gi|281600497|gb|ADA73481.1| Flagellar L-ring protein precursor [Shigella flexneri 2002017]
gi|300318617|gb|EFJ68401.1| flagellar L-ring protein FlgH [Escherichia coli MS 175-1]
gi|300356869|gb|EFJ72739.1| flagellar L-ring protein FlgH [Escherichia coli MS 198-1]
gi|300397111|gb|EFJ80649.1| flagellar L-ring protein FlgH [Escherichia coli MS 69-1]
gi|300405502|gb|EFJ89040.1| flagellar L-ring protein FlgH [Escherichia coli MS 84-1]
gi|300414175|gb|EFJ97485.1| flagellar L-ring protein FlgH [Escherichia coli MS 115-1]
gi|300421082|gb|EFK04393.1| flagellar L-ring protein FlgH [Escherichia coli MS 182-1]
gi|300450521|gb|EFK14141.1| flagellar L-ring protein FlgH [Escherichia coli MS 116-1]
gi|300463627|gb|EFK27120.1| flagellar L-ring protein FlgH [Escherichia coli MS 187-1]
gi|300526439|gb|EFK47508.1| flagellar L-ring protein FlgH [Escherichia coli MS 119-7]
gi|300839700|gb|EFK67460.1| flagellar L-ring protein FlgH [Escherichia coli MS 124-1]
gi|300844943|gb|EFK72703.1| flagellar L-ring protein FlgH [Escherichia coli MS 78-1]
gi|301076720|gb|EFK91526.1| flagellar L-ring protein FlgH [Escherichia coli MS 146-1]
gi|315060357|gb|ADT74684.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli W]
gi|315253880|gb|EFU33848.1| flagellar L-ring protein FlgH [Escherichia coli MS 85-1]
gi|315296710|gb|EFU56005.1| flagellar L-ring protein FlgH [Escherichia coli MS 16-3]
gi|324007919|gb|EGB77138.1| flagellar L-ring protein FlgH [Escherichia coli MS 57-2]
gi|324017417|gb|EGB86636.1| flagellar L-ring protein FlgH [Escherichia coli MS 117-3]
gi|331038421|gb|EGI10641.1| flagellar L-ring protein FlgH [Escherichia coli H736]
gi|331050410|gb|EGI22468.1| flagellar L-ring protein FlgH [Escherichia coli M718]
gi|331075559|gb|EGI46857.1| flagellar L-ring protein FlgH [Escherichia coli H591]
gi|332102085|gb|EGJ05431.1| flagellar basal body L-ring protein [Shigella sp. D9]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|300938644|ref|ZP_07153373.1| flagellar L-ring protein FlgH [Escherichia coli MS 21-1]
gi|300456429|gb|EFK19922.1| flagellar L-ring protein FlgH [Escherichia coli MS 21-1]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKSNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|16760056|ref|NP_455673.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16764536|ref|NP_460151.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142173|ref|NP_805515.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413833|ref|YP_150908.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197362756|ref|YP_002142393.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|207857312|ref|YP_002243963.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213051797|ref|ZP_03344675.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213582040|ref|ZP_03363866.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213865502|ref|ZP_03387621.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|238911000|ref|ZP_04654837.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|61224052|sp|P0A1N8|FLGH_SALTY RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|61224053|sp|P0A1N9|FLGH_SALTI RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81360360|sp|Q5PGU6|FLGH_SALPA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|88911319|sp|Q57QH8|FLGH_SALCH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701930|sp|B5QXY5|FLGH_SALEP RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701932|sp|B5BBA9|FLGH_SALPK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|25373428|pir||AE0640 flagellar L-ring protein precursor [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|153973|gb|AAA27068.1| flgH flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|16419697|gb|AAL20110.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502350|emb|CAD08304.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137803|gb|AAO69364.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56128090|gb|AAV77596.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197094233|emb|CAR59738.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|206709115|emb|CAR33448.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261246391|emb|CBG24200.1| Basal body L-ring protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992954|gb|ACY87839.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157721|emb|CBW17213.1| Flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912167|dbj|BAJ36141.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|322616550|gb|EFY13459.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620509|gb|EFY17373.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622503|gb|EFY19348.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629654|gb|EFY26429.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632626|gb|EFY29372.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636879|gb|EFY33582.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641583|gb|EFY38221.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644073|gb|EFY40619.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650027|gb|EFY46445.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653952|gb|EFY50275.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658484|gb|EFY54746.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663342|gb|EFY59544.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670076|gb|EFY66216.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674860|gb|EFY70951.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676670|gb|EFY72737.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682592|gb|EFY78611.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686655|gb|EFY82634.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195769|gb|EFZ80945.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198339|gb|EFZ83443.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204839|gb|EFZ89833.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209180|gb|EFZ94117.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323217860|gb|EGA02575.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222148|gb|EGA06532.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224920|gb|EGA09178.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229662|gb|EGA13785.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232887|gb|EGA16983.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240622|gb|EGA24664.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242936|gb|EGA26957.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250253|gb|EGA34142.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323258844|gb|EGA42497.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261033|gb|EGA44626.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266942|gb|EGA50427.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269983|gb|EGA53432.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623705|gb|EGE30050.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332988071|gb|AEF07054.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 232
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 1 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 50
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 110
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 111 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 170
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G+V P+ + NSV ++A+ARI Y G G E + NLS
Sbjct: 171 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 230
Query: 237 PL 238
P+
Sbjct: 231 PM 232
>gi|162219162|ref|YP_746586.2| flagellar basal body L-ring protein [Nitrosomonas eutropha C91]
Length = 246
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 23/239 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+++ S++ GC + + M + ++ + +++
Sbjct: 22 VLIVMVSMVTGCS-------------MITPAPKVQQPMTIRPPEPLIIPVSQSNGGIYQA 68
Query: 67 S--------HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + LF+D RA +GD + V + A + + R+ + + L
Sbjct: 69 AFNYQGSGRYTPLFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDLSVPSFLGL 128
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ Q + +L GKG S I V IL NGNL++SG +++ +N
Sbjct: 129 PFKSIFQ-DLDLEAKSSNKFDGKGESSSNNNFTGTITVTVIDILPNGNLLVSGEKQIGIN 187
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++G++ P +V +N+VS ++A+ARI Y G G E + ++SP
Sbjct: 188 QGHEFIRLSGVINPINVM-NNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFFLSISP 245
>gi|237799212|ref|ZP_04587673.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022067|gb|EGI02124.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 237
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRLSVPRLSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A VGDI+T+ + A + S+N++ L
Sbjct: 46 MSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMSKNSNNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V +L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G++R D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 SVRGEKWMTLNTGDELVRIAGLIRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|254230137|ref|ZP_04923532.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
gi|262394936|ref|YP_003286790.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
gi|151937330|gb|EDN56193.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
gi|262338530|gb|ACY52325.1| flagellar L-ring protein FlgH [Vibrio sp. Ex25]
Length = 259
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 93/259 (35%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCH------------------------SSISEITGIPQMSPMGS 36
M R + L + + GC S + +
Sbjct: 1 MKRICLLALIAT--MSGCAMLEPIETDEVTQATTVVDAVEGDKSKEESSGIVDTLRGRSD 58
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + K + SL+ H L+ DS+ +GDI+TV + A
Sbjct: 59 PVAGDPAWAPIHPKKKPEHYAAATGSLFSAEHITDLYDDSKPRGIGDIITVTLDETTSAT 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S+ N Q + N + + + + +G S ++ ++ I
Sbjct: 119 KSANADLSKTNEAQMDPLQVGGEELQIGGKYNFSYDLNNSNSFAGDSSAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D+ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 TGVQQDMQEPGFLARFFNV 257
>gi|309798073|ref|ZP_07692448.1| flagellar L-ring protein FlgH [Escherichia coli MS 145-7]
gi|308118356|gb|EFO55618.1| flagellar L-ring protein FlgH [Escherichia coli MS 145-7]
Length = 235
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + N + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFNGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|292487942|ref|YP_003530817.1| flagellar L-ring protein [Erwinia amylovora CFBP1430]
gi|292899161|ref|YP_003538530.1| flagellar L-ring protein [Erwinia amylovora ATCC 49946]
gi|291199009|emb|CBJ46120.1| flagellar L-ring protein [Erwinia amylovora ATCC 49946]
gi|291553364|emb|CBA20409.1| Flagellar L-ring protein precursor [Erwinia amylovora CFBP1430]
gi|312172063|emb|CBX80320.1| Flagellar L-ring protein precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 233
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 88/235 (37%), Gaps = 12/235 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSL 63
++V L GC + P ++ P + S +
Sbjct: 10 RWLVATLLLTLNGCA-----------LVPRKPLVEGSTTAQPLPASPAMVNGSIFQGVMP 58
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ LF+D R N+GD LT+ ++ + A + R+ S L+
Sbjct: 59 MNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANAGRDGSAEFGLTATPRALVGLL 118
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
NL G GKG + I V +L NGNL + G +++ +N
Sbjct: 119 GGDKANLGGSGKNDFEGKGGATAKNTFTGTITVTVNQVLPNGNLNVVGEKQIEINQGTEF 178
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + A NSV ++A+ARI Y G G E + N+SP+
Sbjct: 179 IRFSGVVNPRTISASNSVVSSQVADARIEYVGNGYINEAQTMGWLQRFFLNISPM 233
>gi|308050369|ref|YP_003913935.1| flagellar L-ring protein [Ferrimonas balearica DSM 9799]
gi|307632559|gb|ADN76861.1| flagellar L-ring protein [Ferrimonas balearica DSM 9799]
Length = 228
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 17/222 (7%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSR 76
C S I P +P+ L + S++ D +A L+ D +
Sbjct: 21 CVHPNSPIPDDPYYAPVYPDL--------------PPSQVVTTGSIFNDGYANELYSDIK 66
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
AL VGD++TV + +A +++N + +L+Y
Sbjct: 67 ALKVGDVITVMLSEQTKAKKSASNEITKDNKMQLD-PISAGGGPITVNGQTIDLSYKEKF 125
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
S + ++ L I+ V +L NGNL+I G + + +ND + +TGIVRP+D+
Sbjct: 126 DMSRESDADQSNSLAGSISVNVLQVLANGNLVIRGEKWITINDGDEFIRITGIVRPRDIS 185
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+N++ ++A ARI Y G G + + + L P
Sbjct: 186 PNNTIESTRVANARIQYSGTGTFADSQKSGWLSKFFSGPLWP 227
>gi|215486288|ref|YP_002328719.1| flagellar basal body L-ring protein [Escherichia coli O127:H6 str.
E2348/69]
gi|31076692|sp|Q8CW55|FLGH_ECOL6 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789280|sp|B7UP93|FLGH_ECO27 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|215264360|emb|CAS08717.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli O127:H6 str. E2348/69]
gi|307553081|gb|ADN45856.1| flagellar L-ring protein FlgH [Escherichia coli ABU 83972]
Length = 232
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGVFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|21242724|ref|NP_642306.1| flagellar basal body L-ring protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|31076714|sp|Q8PL26|FLGH_XANAC RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|21108200|gb|AAM36842.1| flagellar L-ring protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 230
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +M+P+ + + + +++
Sbjct: 12 LAIACSALLGGCVAAG-DVRPFAEMAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 57 GPGLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMAAPTLLGAPLTVGGL 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 NVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|330447906|ref|ZP_08311554.1| flagellar L-ring protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492097|dbj|GAA06051.1| flagellar L-ring protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 222
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 18/222 (8%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKD 74
GC I P N F D S K SL+R ++ LF+D
Sbjct: 15 SGCAVREEFIPPEP------------NDAAFAPPDLDYSLPEAKHGSLYRHNYSMTLFQD 62
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGD+LTV + Q+ T +++S+ + + + + G
Sbjct: 63 RRAYRVGDVLTVLLNEQTQSSKKANTKFGKSSSIDFAVPTL-----GNKAFDDLSASVSG 117
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
G + ++ KL I V +L NG L+I G + +R+N + +TG+VR D
Sbjct: 118 DRGFDGAAASTQGNKLQGAITVTVHKVLPNGVLMIRGEKWIRLNQGDEYIRLTGVVRVDD 177
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
V+ HN VS +I +ARI+Y G+G + Q +
Sbjct: 178 VNRHNQVSSQRIGDARITYSGRGALADSNAAGWLTQFFTSPW 219
>gi|26247219|ref|NP_753259.1| flagellar basal body L-ring protein [Escherichia coli CFT073]
gi|26107620|gb|AAN79819.1|AE016759_93 Flagellar L-ring protein precursor [Escherichia coli CFT073]
Length = 237
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 16 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 65
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 66 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGVFGNA 125
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 126 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 185
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 186 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 237
>gi|82777308|ref|YP_403657.1| flagellar basal body L-ring protein [Shigella dysenteriae Sd197]
gi|110816542|sp|Q32ET9|FLGH_SHIDS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81241456|gb|ABB62166.1| basal-body outer-membrane L ring protein [Shigella dysenteriae
Sd197]
Length = 232
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P LG + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVLGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|325927972|ref|ZP_08189193.1| flagellar basal body L-ring protein [Xanthomonas perforans 91-118]
gi|325541657|gb|EGD13178.1| flagellar basal body L-ring protein [Xanthomonas perforans 91-118]
Length = 230
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LAIACSALLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 S-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 57 GPSLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMAAPTLLGAPLTVGGL 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 NVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|325982368|ref|YP_004294770.1| flagellar L-ring protein [Nitrosomonas sp. AL212]
gi|325531887|gb|ADZ26608.1| flagellar L-ring protein [Nitrosomonas sp. AL212]
Length = 238
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
RY F +L ++ + GC ++ S +T P + + + G + +ST
Sbjct: 13 RYLFALLFFT-FVSGCTTTPSTVTHQPN--SLRPAHQSLAVIQPNGSILQALNSTTNGVR 69
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D RA +VGD + V + A + + R+ S+ + +
Sbjct: 70 -----YTPLFEDRRARSVGDTIIVTLNERTNASKSSGSNVDRSGSIDFSVPSLLGIPLGL 124
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ + + G G S I V L NGNL++SG +++ +N
Sbjct: 125 LKKHAT-VEAKSNNSFDGGGESSSKNDFKGTITVTVIEALPNGNLVVSGEKQIGINQGQE 183
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++G+V P V N++S +IA+ARI Y G E + N +P
Sbjct: 184 FIRLSGVVNPIHVM-GNTISSTQIADARIEYRANGYIDEAQTMGWLSRFFLNATP 237
>gi|94263285|ref|ZP_01287101.1| Flagellar L-ring protein [delta proteobacterium MLMS-1]
gi|93456368|gb|EAT06492.1| Flagellar L-ring protein [delta proteobacterium MLMS-1]
Length = 242
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 20/249 (8%)
Query: 1 MYRYSFIVLCYSSLL-----FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R S I+ + GC ++ +++P E F + +
Sbjct: 1 MKRQSLIMPALLIIGLGLNLAGCSTT---GGSSAEVAP-----SERLPERFALPETERPR 52
Query: 56 STKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ +++ L++D RA ++GDI+ V + T R +SL L+
Sbjct: 53 EVAREGTIYNGGQGLDLYRDGRARDIGDIVQVRVVETSSGQKSADTSTDRGSSLSGGLTS 112
Query: 115 GFSLFG------QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
F L + ++ G G SR + I+A + +GNL+
Sbjct: 113 FFGLENWVNERSSKFALTPNAMDAGMSNEFEGSGDTSRDSDVTATISARIVDKTMDGNLV 172
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G QEVRVN+E + + ++G+VRP D+ + N+V ++IA+ARI Y GKG + RP
Sbjct: 173 IRGYQEVRVNNETQFIILSGLVRPDDITSDNAVLSNRIADARIEYSGKGELADKQRPGWL 232
Query: 229 HQLIENLSP 237
+ ++ + P
Sbjct: 233 SRTVDAVWP 241
>gi|197285507|ref|YP_002151379.1| flagellar basal body L-ring protein [Proteus mirabilis HI4320]
gi|194682994|emb|CAR43439.1| flagellar L-ring protein precursor [Proteus mirabilis HI4320]
Length = 247
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 22/239 (9%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
L GC ++ + + S++
Sbjct: 24 RLGTALLVLTLAGCA----------------QIPEKPLVEGHTTAIPTAPTTPAPNGSIF 67
Query: 65 RD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + LF+D R N+GD LT+ ++ + A ++ SRN S
Sbjct: 68 QATQPVYFGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKAGFLASITPRF 127
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ +G GKG + I V +L NGNL + G +++ +N
Sbjct: 128 LEGLLGNSRTDMGMEGNSEFGGKGGANANNTFKGTITVTVDQLLANGNLHVVGEKQIAIN 187
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 QGTEFIRFSGVVNPRTISGSNTVNSTQVADARIEYIGDGYINEAQSMGWLQRFFLNVSP 246
>gi|157373204|ref|YP_001471804.1| flagellar basal body L-ring protein [Shewanella sediminis HAW-EB3]
gi|157315578|gb|ABV34676.1| flagellar L-ring protein [Shewanella sediminis HAW-EB3]
Length = 220
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 95/239 (39%), Gaps = 21/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R+ +I + LL GC ++ E P + + + S K
Sbjct: 1 MRHLWIGMLL--LLSGCAANFPEADTKP------------GQPEWAPPEIDYSLPDAKDG 46
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S +R + LFKD RA GDILTV + + T ++ L
Sbjct: 47 SAYRQGYMLTLFKDKRAFREGDILTVALDEKTYSSKRADTKANKEQDLSIGAQASAG--- 103
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+G + G GS ++ +L+ I V +L NG L+I G + +R+N
Sbjct: 104 --DSSYSGAGDGSLARGFKGSGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQG 161
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
L + G++R D+ N++S +IA+ARI YGG+G + + + PL
Sbjct: 162 DEYLRLLGLIRTDDIGNDNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL 220
>gi|260768779|ref|ZP_05877713.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
gi|260616809|gb|EEX41994.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
Length = 219
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 17/232 (7%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++ S L GC S+ + D+ + P + + SL+
Sbjct: 1 MVLALVSMTLVGCAGRTSDF--------VPPCPDDADFAP---PEINYDVARVSKGSLYT 49
Query: 66 DSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ A LF+D RA VGDILTV + ++ T +N++ +
Sbjct: 50 GNAAMTLFQDRRAYRVGDILTVLLNEKTESDKSATTKYGKNSNASLNVPTL-----GTHV 104
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
N + + G +G + + L+ I V +L NG L + G + +++N +
Sbjct: 105 FDNLSASASGNRDFAGSAASKQGNSLSGSITVTVYQVLPNGVLRVRGEKWLKLNQGDEFI 164
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+TG VR D+ A N++S +IA+ARI+Y G+G + Q +
Sbjct: 165 RLTGNVRASDISADNTLSSQRIADARITYAGRGSFADTNTAGWLTQFFNSPW 216
>gi|283478791|emb|CAY74707.1| Flagellar L-ring protein precursor [Erwinia pyrifoliae DSM 12163]
Length = 245
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 87/235 (37%), Gaps = 12/235 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSL 63
++V L GC + P ++ P + S +
Sbjct: 22 RWLVATLLLTLNGCA-----------LVPRKPLVEGSTTAQPLPASPAMVNGSIFQGVMP 70
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ LF+D R N+GD LT+ ++ + A + R+ S L+
Sbjct: 71 MNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANAGRDGSAEFGLTATPRALVGLL 130
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
L G GKG + I V +L NGNL + G +++ +N
Sbjct: 131 GGDKATLGGSGKNDFEGKGGATAKNTFTGTITVTVNQVLPNGNLNVVGEKQIEINQGTEF 190
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + A NSV ++A+ARI Y G G E + N+SP+
Sbjct: 191 IRFSGVVNPRTISASNSVVSSQVADARIEYVGNGYINEAQTMGWLQRFFLNISPM 245
>gi|227886563|ref|ZP_04004368.1| flagellar basal body L-ring protein [Escherichia coli 83972]
gi|300974383|ref|ZP_07172595.1| flagellar L-ring protein FlgH [Escherichia coli MS 45-1]
gi|227836767|gb|EEJ47233.1| flagellar basal body L-ring protein [Escherichia coli 83972]
gi|300410626|gb|EFJ94164.1| flagellar L-ring protein FlgH [Escherichia coli MS 45-1]
Length = 235
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGVFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 183
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 184 SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|259908809|ref|YP_002649165.1| flagellar basal body L-ring protein [Erwinia pyrifoliae Ep1/96]
gi|224964431|emb|CAX55940.1| Flagellar L-ring protein [Erwinia pyrifoliae Ep1/96]
gi|310767293|gb|ADP12243.1| Flagellar L-ring protein precursor [Erwinia sp. Ejp617]
Length = 233
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 87/235 (37%), Gaps = 12/235 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSL 63
++V L GC + P ++ P + S +
Sbjct: 10 RWLVATLLLTLNGCA-----------LVPRKPLVEGSTTAQPLPASPAMVNGSIFQGVMP 58
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ LF+D R N+GD LT+ ++ + A + R+ S L+
Sbjct: 59 MNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANAGRDGSAEFGLTATPRALVGLL 118
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
L G GKG + I V +L NGNL + G +++ +N
Sbjct: 119 GGDKATLGGSGKNDFEGKGGATAKNTFTGTITVTVNQVLPNGNLNVVGEKQIEINQGTEF 178
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + A NSV ++A+ARI Y G G E + N+SP+
Sbjct: 179 IRFSGVVNPRTISASNSVVSSQVADARIEYVGNGYINEAQTMGWLQRFFLNISPM 233
>gi|237755439|ref|ZP_04584064.1| flagellar L-ring protein FlgH [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692403|gb|EEP61386.1| flagellar L-ring protein FlgH [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 224
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + GC SE +P + + +
Sbjct: 1 MKRLLLLFGVIGFITVGCAKKTSEYGKPFNPNP---------------PEIEQEKVVRTP 45
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ ++ LF DS+A VGDI+T+ + + + T + + +
Sbjct: 46 GSLYTGTYNNLFSDSKAFTVGDIITIRVVENIAGQTASNTNTQEQQKMDLNVPSPKLMGK 105
Query: 121 QQTPQMN-GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + G S +R L I+A VT + NGNL I G + V+VND
Sbjct: 106 DLINKTPIAGITEQNSDTYKGSASTNRKSTLIATISARVTKVYPNGNLFIVGKKVVKVND 165
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++L ++GIV+P D+ NSV +I++ + Y G+ + RP Q ++ + P
Sbjct: 166 DYQTLVISGIVKPTDIMQDNSVDSSRISDMYVEYNGRSYMADSSRPGWLAQFLKRIWP 223
>gi|238794001|ref|ZP_04637619.1| Flagellar L-ring protein [Yersinia intermedia ATCC 29909]
gi|238726633|gb|EEQ18169.1| Flagellar L-ring protein [Yersinia intermedia ATCC 29909]
Length = 237
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 12/229 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ LL GC P S +D + P + S ++ +
Sbjct: 19 LTAMLLNGCA-----------YIPHKSLVDGTTSAQPAPASAPLPNGSIFQAAQPMNYGY 67
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R NVGD LT+ ++ + A + SRN + ++
Sbjct: 68 QPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGASKFGVATSPRYLEGLLGNARA 127
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+++ G GKG + + I V +L NGNL + G +++ +N + +G
Sbjct: 128 DMDISGDNTFGGKGGANANNTFSGTITVTVDRVLANGNLHVVGEKQIAINQGTEFIRFSG 187
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 VVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNISP 236
>gi|92114095|ref|YP_574023.1| flagellar L-ring protein [Chromohalobacter salexigens DSM 3043]
gi|91797185|gb|ABE59324.1| flagellar L-ring protein [Chromohalobacter salexigens DSM 3043]
Length = 224
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 21/233 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ L ++ GC + + +P P+ + + + ++++
Sbjct: 10 LCLLLMLIMSGCA-QLPHESVVPDTGPVSYP---------------EAPLPQPNGAIYQA 53
Query: 67 --SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ LF+D R +GDI+T+ I D A D+ +R S+ L L
Sbjct: 54 RYGYQPLFQDRRPRQIGDIITITINEDVSASKDSSASANREGSMGLDLETIPDLMSFLE- 112
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ L+ G G G S + + A V IL NGNL I G + + +N +
Sbjct: 113 --DNGLDVSGENDFEGSGGASASNTFTGTLTATVVDILPNGNLSIRGEKRIAINQGTEYI 170
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ V N+V ++A+ARI Y G G E +L N++P
Sbjct: 171 RFSGVVDPRSVTTQNTVPSGQVADARIEYVGDGYINEAQHMGWLQRLWLNIAP 223
>gi|294635613|ref|ZP_06714090.1| flagellar L-ring protein FlgH [Edwardsiella tarda ATCC 23685]
gi|291091065|gb|EFE23626.1| flagellar L-ring protein FlgH [Edwardsiella tarda ATCC 23685]
Length = 236
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 22/243 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R+S I L + L GC + + + +
Sbjct: 9 MQRHSGIALLCALALSGCA----------------YIPHDQVVTGPTTATPAPATPPRAN 52
Query: 61 YSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
S+++ + LF+D R N+GDILT+ ++ + A + SRN +
Sbjct: 53 GSIFQGVQPMNYGYQPLFEDRRPRNIGDILTIVLQENVSASKSSSANASRNGGSKFDFAT 112
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
N+ +G +GKG + + I V +L NGNL + G ++
Sbjct: 113 VPRYLEGLFGNARANMEVNGENQFNGKGGANANNTFSGTITVTVADVLSNGNLKVVGEKQ 172
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + +G+V P+ + +NSV ++A+ARI Y G G E + N
Sbjct: 173 IAINQGTEYIRFSGVVNPRTISGNNSVPSTQVADARIEYVGSGYINEAQNMGWMQRFFLN 232
Query: 235 LSP 237
LSP
Sbjct: 233 LSP 235
>gi|303248237|ref|ZP_07334500.1| flagellar L-ring protein [Desulfovibrio fructosovorans JJ]
gi|302490375|gb|EFL50286.1| flagellar L-ring protein [Desulfovibrio fructosovorans JJ]
Length = 240
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F+ L + L C + + T +PQ++P K +
Sbjct: 1 MIRKQFLPLLLIAGLAACAPASKKATPMPQVTPT---------------VAKAPPPAQNP 45
Query: 61 YSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ + LF D+RA +GDILTV+I ++ +T + +S +S F
Sbjct: 46 GSVFSQNQPTFLFDDTRARRIGDILTVNIVDTSKSDLKAETKNDKTSSQQFGVSNYFGNK 105
Query: 120 GQQTP----------------QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILE 163
++ KG R + I + IL
Sbjct: 106 TITGNLPGQLGGPDFGMKGYTGSTPLVSVSNAEKFQSKGETKRESAVTASIGCRIVNILP 165
Query: 164 NGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELL 223
G + + G+++ RVN+E + + V G+VRP DV N+V+ ++A+ +I Y G+G +
Sbjct: 166 GGVMQLEGARQTRVNNENQIIVVKGLVRPIDVGPSNTVASTQLADCQIEYYGEGDLADRQ 225
Query: 224 RPPIGHQLIENLSP 237
+ ++++N+ P
Sbjct: 226 KSGWLARILDNVWP 239
>gi|212637788|ref|YP_002314313.1| flagellar basal body L-ring protein [Shewanella piezotolerans WP3]
gi|212559272|gb|ACJ31726.1| Flagellar L-ring protein [Shewanella piezotolerans WP3]
Length = 224
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 19/234 (8%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + LL GC + E E + + + S K S++R
Sbjct: 8 LGIAMLVLLSGCVAHFPE------------PDTEPGKPEWAPPEIDYSLPDAKDGSVYRP 55
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
LFKD RA GDILTV + + T ++ + L +
Sbjct: 56 GFMLTLFKDKRAFREGDILTVALDEKTYSSKRADTKTNKASGLSID-----GQGTTGSNS 110
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G+ + G + +G GS ++ +L+ I V +L NG L+I G + +R+N L
Sbjct: 111 VAGSGEANMGRSFNGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQGDEYLR 170
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
+ G++R D+ N++S +IA+ARI YGG+G ++ R + + PL
Sbjct: 171 LLGLIRTDDIGNDNTISSQRIADARIIYGGQGAISDSNRMGWASRYFNSPWFPL 224
>gi|315497879|ref|YP_004086683.1| flagellar l-ring protein [Asticcacaulis excentricus CB 48]
gi|315415891|gb|ADU12532.1| flagellar L-ring protein [Asticcacaulis excentricus CB 48]
Length = 242
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 128/228 (56%), Gaps = 10/228 (4%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDS 75
GC S ++E P + PMG +P + + ++ + SLWR A FKD
Sbjct: 18 SGCAS-VNEAVNGPSLQPMGYPAQ---LVPQQQVYAPPASTSASANSLWRTGAKAFFKDQ 73
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN------GN 129
RA +VGDILTV I IDD+A N T R R+ S + F L +
Sbjct: 74 RARHVGDILTVTIDIDDKAQTQNTTSRKRDGSYTGSVPSVFGLESSLGKILPSEYNPSAG 133
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
L+ + SG GS++R+EK++L +AAIVT +L NGNLII GSQEVR N E+R L V+GI
Sbjct: 134 LSNNTAAEFSGSGSVNRSEKISLTVAAIVTGVLPNGNLIIQGSQEVRTNREVRELIVSGI 193
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V PQD+ + N + + ++AEARISYGG+G + + P+ L+E SP
Sbjct: 194 VNPQDISSANIIKHTQLAEARISYGGRGDVSRMQAAPVSQNLMEKFSP 241
>gi|320354344|ref|YP_004195683.1| flagellar L-ring protein [Desulfobulbus propionicus DSM 2032]
gi|320122846|gb|ADW18392.1| flagellar L-ring protein [Desulfobulbus propionicus DSM 2032]
Length = 246
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 3 RYSFIVLCYSSLL-FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + ++L ++L+ GC S+ E+ SP+ L+E + +
Sbjct: 20 RMAMVLLLAATLVTAGCGSTSQEV------SPVTEPLEEP---------VVDDARPQSPG 64
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG- 120
+LW D +A VGDI+TV I + +A + T R++S+ +S F L
Sbjct: 65 TLWNGDEGNWLADVKARRVGDIVTVIIEEEAKASKEATTDTDRSSSISAGISSFFGLEKS 124
Query: 121 ----QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+ + + G SG G +R+E L + V + NGNL I G + V
Sbjct: 125 LEEKNSNLETSALVEASSGNQFSGGGKTTRSENLVATLTTQVVEVYPNGNLKIRGGKSVT 184
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VN+E + + +TGIVR DV A N+V+ I A+ISY GKG ++ +P ++ ++
Sbjct: 185 VNNENQIIYLTGIVRSYDVTADNTVNSGNILNAQISYTGKGAVSDKQKPGWMMRIFDHTW 244
Query: 237 P 237
P
Sbjct: 245 P 245
>gi|238755321|ref|ZP_04616664.1| Flagellar L-ring protein [Yersinia ruckeri ATCC 29473]
gi|238706457|gb|EEP98831.1| Flagellar L-ring protein [Yersinia ruckeri ATCC 29473]
Length = 219
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 12/229 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
LL GC P +D + P + S ++ +
Sbjct: 1 MAMLLLNGCA-----------YIPHKPLVDGTTSAQPAPASAPLPNGSIFQAVQPMNYGY 49
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R NVGD LT+ ++ + A + SRN S ++
Sbjct: 50 QPLFEDRRPRNVGDTLTITLQENVSASKSSSANASRNGSSKFGVATAPRYLEGLLGNARA 109
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+++ G + GKG + + I V +L NGNL + G +++ +N + +G
Sbjct: 110 DMDISGDNSFGGKGGANANNTFSGTITVTVNQVLANGNLHVVGEKQIAINQGTEFIRFSG 169
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 170 VVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQNMGWLQRFFLNVSP 218
>gi|223041237|ref|ZP_03611486.1| flagellar L-ring protein FlgH [Campylobacter rectus RM3267]
gi|222877496|gb|EEF12628.1| flagellar L-ring protein FlgH [Campylobacter rectus RM3267]
Length = 233
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ L GC + +D + + K ++ +
Sbjct: 1 MKKNIYFCAVLTAFLSGC------------LPSADPRIDMKPPVYVEQLPAKQVNNQPNA 48
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH-------RKLS 113
SL+ LF D +A+NV DI+TV I + S+N++++ +
Sbjct: 49 GSLFGRGDNPLFADRKAMNVNDIVTVVISERANQSSSGKHDTSKNSTINLGGGLFSAGSA 108
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+L Q N + +G GS RAE I+A + +LENGN I GS+
Sbjct: 109 PLSTLATQLNKVGNIGFSAGTKNEFTGAGSSVRAEAFTTTISARIIKVLENGNYFIEGSR 168
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N + IA+A+I Y +G R P G +L+E
Sbjct: 169 ELLINGEKQIMQLSGVIRPYDISNANEIDSRYIADAKILYKTEGDLDRATRKPWGTKLME 228
Query: 234 NLSP 237
+ P
Sbjct: 229 AIWP 232
>gi|325916944|ref|ZP_08179188.1| flagellar basal body L-ring protein [Xanthomonas vesicatoria ATCC
35937]
gi|325536847|gb|EGD08599.1| flagellar basal body L-ring protein [Xanthomonas vesicatoria ATCC
35937]
Length = 230
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 FAIACSALLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 S-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ +++ +
Sbjct: 57 GPSLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKADTVDMSTPTLLGVPLTVNGT 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 DVLRNFTNGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIGPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|292489130|ref|YP_003532017.1| flagellar L-ring protein [Erwinia amylovora CFBP1430]
gi|292900249|ref|YP_003539618.1| flagellar L-ring protein [Erwinia amylovora ATCC 49946]
gi|291200097|emb|CBJ47223.1| flagellar L-ring protein [Erwinia amylovora ATCC 49946]
gi|291554564|emb|CBA22175.1| Flagellar L-ring protein precursor [Erwinia amylovora CFBP1430]
Length = 237
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ + LL GC I P + + P S S +S
Sbjct: 13 RRVVAVSAVLLLTGCA----HIMQQPLV------QGPTSATPLQMAPIGASGSLFQSGQA 62
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ +F+D R NVGD LT+ ++ + A + +RN S L S
Sbjct: 63 MNYGYQPMFEDRRPRNVGDTLTILLQENVSASKSSSASANRNGSAGMGLEVVPSSVSGAL 122
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ N G +GKG + I V +L NGNL + G +++ +N
Sbjct: 123 GNGKLDFNAGGQSDFAGKGGAAARNTFTGTITVTVNQLLPNGNLQVVGEKQIAINQGTEF 182
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + +N+VS ++++ARI Y G G E +++ N+SP
Sbjct: 183 IRFSGVVNPRTISGNNTVSSTQVSDARIEYVGNGYINESQNMGWLQRVLLNISP 236
>gi|78358196|ref|YP_389645.1| flagellar basal body L-ring protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|110816529|sp|Q30WJ6|FLGH_DESDG RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|78220601|gb|ABB39950.1| flagellar L-ring protein FlgH [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 234
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 25/247 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
RY+ I + GC ++ + P + P + + +
Sbjct: 1 MRYAVICMLL-LAASGCTAARQAPSPEPGLVP-------------PPVVTTPEEKAENPG 46
Query: 62 SLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS--- 117
SL+ D +A L + D RA VGDI+ ++I + +A T ++ ++ +S F
Sbjct: 47 SLFSDENADLLYADYRARRVGDIVLINIVENSKAENKASTSTNKESTGEYGVSSFFDRSK 106
Query: 118 -------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
L + SG G +R + IAA VT +L G + +
Sbjct: 107 VGIIPGQTLLSGRTGDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPGGLMQVE 166
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
GS+E RVN+E + + V+G+VR DV NSV ++A+ARISY GKG ++ R +
Sbjct: 167 GSRETRVNEETQIVTVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTR 226
Query: 231 LIENLSP 237
L++NL P
Sbjct: 227 LMDNLWP 233
>gi|21231394|ref|NP_637311.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768553|ref|YP_243315.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188991638|ref|YP_001903648.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
campestris str. B100]
gi|31076713|sp|Q8P9B9|FLGH_XANCP RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81305475|sp|Q4UUH8|FLGH_XANC8 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701938|sp|B0RT13|FLGH_XANCB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|21113059|gb|AAM41235.1| flagellar L-ring protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573885|gb|AAY49295.1| flagellar L-ring protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733398|emb|CAP51599.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 230
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LAIACSALLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 S-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ + A T S+ +++ +
Sbjct: 57 GPSLNLYGDRRARDVGDLLTVNLVENTTASSTANTSISKADTVDMSTPTLLGVPLTVNGI 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 DVLRNSTSGDRSFDGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ NSV K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIAPDNSVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|294665576|ref|ZP_06730857.1| flagellar L-ring protein precursor [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604674|gb|EFF48044.1| flagellar L-ring protein precursor [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 230
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ S+LL GC ++ ++ +M+P+ + + + +++
Sbjct: 12 LATACSALLGGCVAAG-DVRPFAEMAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 57 GPGLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMAAPTLLGAPLTVGGL 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 NVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 177 VQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|256830174|ref|YP_003158902.1| flagellar L-ring protein [Desulfomicrobium baculatum DSM 4028]
gi|256579350|gb|ACU90486.1| flagellar L-ring protein [Desulfomicrobium baculatum DSM 4028]
Length = 229
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +++ +L GC ++ ++P + +
Sbjct: 1 MQKRCMMLMLAVLVLSGCRTTSRPPMPAAVVTP---------------PPQERVSEARNP 45
Query: 61 YSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-- 117
SL+ D LF D+RA VGDI+ + + + T R +S++ +S
Sbjct: 46 GSLFDPDGATMLFADARAKRVGDIVLIKVVETTLSKSKASTTADRESSMNLGVSAYLGKD 105
Query: 118 ---LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
L T + +N G G R L +AA VT +L G + + G++E
Sbjct: 106 KLPLIPGATVGPDALVNAGSTSGFEGDGETKRESSLTTTVAARVTRVLGGGLMEVVGARE 165
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
RVN E + + V G+ R +D+DA N++ +AEARI G+G + RP ++++N
Sbjct: 166 TRVNGETQIVLVQGVARDRDIDADNTIMSTSLAEARIELYGEGVLADKQRPGWLARILDN 225
Query: 235 LSP 237
+ P
Sbjct: 226 VWP 228
>gi|227355998|ref|ZP_03840390.1| flagellar L-ring protein precursor [Proteus mirabilis ATCC 29906]
gi|227163986|gb|EEI48888.1| flagellar L-ring protein precursor [Proteus mirabilis ATCC 29906]
Length = 247
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 22/239 (9%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
L GC + + + S++
Sbjct: 24 RLGTALLVLTLAGCAQIPKK----------------PLVEGHTTAIPTAPTTPAPNGSIF 67
Query: 65 RD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + LF+D R N+GD LT+ ++ + A ++ SRN S
Sbjct: 68 QATQPVYFGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKAGFLASITPRF 127
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ +G GKG + I V +L NGNL + G +++ +N
Sbjct: 128 LEGLLGNSRTDMGMEGNSEFGGKGGANANNTFKGTITVTVDQLLANGNLHVVGEKQIAIN 187
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V+ ++A+ARI Y G G E + N+SP
Sbjct: 188 QGTEFIRFSGVVNPRTISGSNTVNSTQVADARIEYIGDGYINEAQSMGWLQRFFLNVSP 246
>gi|88799024|ref|ZP_01114605.1| Flagellar basal body L-ring protein [Reinekea sp. MED297]
gi|88778251|gb|EAR09445.1| Flagellar basal body L-ring protein [Reinekea sp. MED297]
Length = 229
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++ + ++ GC S +I +P SP E +P + + SL+
Sbjct: 7 LLIGLTAVIMTGCGS--MQIANLP--SPPQPGDPEFAPVPSDSLVPPPN----TGGSLYA 58
Query: 66 DSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
D++ +L+ D +A VGDI+TV + Q + + S+ + + P
Sbjct: 59 DAYGMSLYGDKKARRVGDIITVLLDEQTQGSKSSASNTSKTSEATISAPSVGGI----GP 114
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ G + SG+G ++ L+ I V+ +L NG L + G + + +N+ +
Sbjct: 115 IDQLGASIQGDRSFSGRGDADQSNSLSGNITVTVSEVLPNGVLRVRGEKWITLNNGSEFI 174
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ G++RP D++ N+VS K+A+ARISY G G + + + P
Sbjct: 175 RIQGMLRPDDINLDNTVSSQKLADARISYSGAGAIANSSKQGWLSAFFNSPVFP 228
>gi|312173288|emb|CBX81543.1| Flagellar L-ring protein precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 237
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 10/234 (4%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ LL GC I P + + P S S +S
Sbjct: 13 RRVAAVSAVLLLTGCA----HIMQQPLV------QGPTSATPLQMAPIGASGSLFQSGQA 62
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ +F+D R NVGD LT+ ++ + A + +RN S L S
Sbjct: 63 MNYGYQPMFEDRRPRNVGDTLTILLQENVSASKSSSASANRNGSAGMGLEVVPSSVSGAL 122
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ N G +GKG + I V +L NGNL + G +++ +N
Sbjct: 123 GNGKLDFNAGGQSDFAGKGGAAARNTFTGTITVTVNQLLPNGNLQVVGEKQIAINQGTEF 182
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + +N+VS ++++ARI Y G G E +++ N+SP
Sbjct: 183 IRFSGVVNPRTISGNNTVSSTQVSDARIEYVGNGYINESQNMGWLQRVLLNISP 236
>gi|222053734|ref|YP_002536096.1| flagellar L-ring protein [Geobacter sp. FRC-32]
gi|221563023|gb|ACM18995.1| flagellar L-ring protein [Geobacter sp. FRC-32]
Length = 230
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 5/210 (2%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDD 92
P S R P + + T S S+W+DS + +D +A GD LTV I
Sbjct: 20 PACSFQSSEIRTPTFDEQMQQAKPTYTSGSIWQDSSTGITEDLKARRRGDTLTVVITEQA 79
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP-----QMNGNLNYDGGGASSGKGSISRA 147
A TG SR +++ + L T ++ LN G G +R
Sbjct: 80 SASKQATTGTSRGSTISAGIPNLMGLETNITGISNWMDLSNLLNASYDSKYDGSGKTTRE 139
Query: 148 EKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIA 207
E L I A V ++ NGNL+I G + V+VN+E + + +TG VR +D+ + N V+ IA
Sbjct: 140 ENLRATITAKVIDVIGNGNLLIEGKRNVKVNNEDQIIVLTGTVRTRDISSDNVVNSIYIA 199
Query: 208 EARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ARI+Y GKG ++ RP +++ + P
Sbjct: 200 DARINYSGKGVISDRQRPGWLMGILDVIWP 229
>gi|294084415|ref|YP_003551173.1| flagellar L-ring protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663988|gb|ADE39089.1| flagellar L-ring protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 226
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ S V + L GC + + + + P+ + D + +
Sbjct: 2 LNARSLFVALFMLGLGGCSTYVENQASV-EFEPIYETNDFTQMVAIP------------T 48
Query: 61 YSLWRDSHAALFK-DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++ + LF D RA NVGDILTV + A ++ +S L
Sbjct: 49 GGIFEKTKGGLFATDRRARNVGDILTVSLSESFSATKSQTAASAKTDSFGVTLPTALPNI 108
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ L + SG GS +++ L+ ++ V + +NGN+ I G +++ +N+
Sbjct: 109 LT-GGYSDAGLTGGAARSFSGSGSAAQSNSLSGFLSVTVMRVFDNGNMEIKGQKKLNLNN 167
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +TG+VRPQD+ A N V ++IA+A+I+Y G G T + R + + +SP
Sbjct: 168 GDEYVRLTGLVRPQDISASNLVLSNRIADAQITYVGAGETADSARQGWLSKTLRTISP 225
>gi|186896768|ref|YP_001873880.1| flagellar basal body L-ring protein [Yersinia pseudotuberculosis
PB1/+]
gi|186699794|gb|ACC90423.1| flagellar L-ring protein [Yersinia pseudotuberculosis PB1/+]
Length = 212
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 20/230 (8%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA- 69
L GC S P + + +++ + + + L++ ++
Sbjct: 1 MVLALCGCES--------PALL-----VQKDDAEFAPPANLVQPATVTEGGGLFQPAYNW 47
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN 129
+L +D RA +GDILTV + Q+ +T + N + + +
Sbjct: 48 SLLQDRRAYRIGDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGG---- 103
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+ G G + ++ L I V +L NG L+I G + + +N + VTG+
Sbjct: 104 -SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMRVTGL 162
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
VR DV NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 VRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 212
>gi|238762357|ref|ZP_04623328.1| Flagellar L-ring protein 1 [Yersinia kristensenii ATCC 33638]
gi|238699342|gb|EEP92088.1| Flagellar L-ring protein 1 [Yersinia kristensenii ATCC 33638]
Length = 212
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 20/230 (8%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA- 69
L GC + P + + +++ + + K+ L++ ++
Sbjct: 1 MVLALSGCET--------PALL-----VHKDDVAFAPPANLIQPTTVKEGGGLFQPAYNW 47
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN 129
+L +D RA +GDILTV + Q+ +T + N + + +
Sbjct: 48 SLLQDRRAYRIGDILTVKLDESTQSSKQAKTNFGKKNDMSLGIPEILGKKLNKLGG---- 103
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+ G G + ++ L I V +L NG L+I G + + +N + VTG+
Sbjct: 104 -SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMRVTGL 162
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
VR DV+ NSVS +IA ARISY G+G ++ + + L P+
Sbjct: 163 VRADDVERDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 212
>gi|283477479|emb|CAY73395.1| Flagellar L-ring protein precursor [Erwinia pyrifoliae DSM 12163]
Length = 237
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 10/233 (4%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + LL GC I P + + P S S +S
Sbjct: 14 RVAAISAALLLTGCA----HIMQQPLVQ------GPTSATPLQMAPTGASGSLFQSGQAM 63
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ +F+D R NVGD LT+ ++ + A + +RN S L S
Sbjct: 64 NYGYQPMFEDRRPRNVGDTLTILLQENVSASKSSSASANRNGSAGMGLEVVPSSVSGALG 123
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ N +G +GKG + I V +L NGNL + G +++ +N +
Sbjct: 124 NGKLDFNAEGQSDFAGKGGAAARNTFTGTITVTVNQLLPNGNLQVVGEKQIAINQGTEFI 183
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + N+VS ++++ARI Y G G E +++ N+SP
Sbjct: 184 RFSGVVNPRTISGSNTVSSTQVSDARIEYVGNGYINESQNMGWLQRVLLNISP 236
>gi|194432358|ref|ZP_03064645.1| flagellar L-ring protein FlgH [Shigella dysenteriae 1012]
gi|194419245|gb|EDX35327.1| flagellar L-ring protein FlgH [Shigella dysenteriae 1012]
Length = 219
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 10/229 (4%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA 69
L GC S +P+ + P G + S +S +
Sbjct: 1 MLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINYGYQ 50
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN 129
LF+D R N+GD LT+ ++ + A + SR+ + +
Sbjct: 51 PLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARAD 110
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+ GG +GKG + + + + V +L NGNL + G +++ +N + +G+
Sbjct: 111 VEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGV 170
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 171 VNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 219
>gi|23015790|ref|ZP_00055557.1| COG2063: Flagellar basal body L-ring protein [Magnetospirillum
magnetotacticum MS-1]
Length = 263
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 13/236 (5%)
Query: 15 LFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF 72
L C+ + +SE+ PQ SP+ + + P + S + + SLWR A F
Sbjct: 27 LSACNMLTRMSEVGSGPQSSPISNPTQASGYQPVSMPMPQPSAPPQNANSLWRPGARAFF 86
Query: 73 KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP-------- 124
KD RA +VGDILTV + I D A SR S S
Sbjct: 87 KDQRAKDVGDILTVAVSISDSATLTTGLTNSRTGSEKAGSGTTGSSITAVGLESQLAKLL 146
Query: 125 ---QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + A + G+ +R E + + +AA++T +L NGNL+ISG QE RVN E+
Sbjct: 147 PNINLASLADLSSTSAVTNSGNTTRTESITMSMAAVITQVLPNGNLVISGRQEFRVNYEM 206
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R L++ GI+RP+D+ + NSVS +KIAEAR+ YGG+G ++L +P G Q+ + + P
Sbjct: 207 RELSIQGIIRPEDISSSNSVSSEKIAEARVYYGGRGMVSDLTQPRYGQQIFDIIFP 262
>gi|330889079|gb|EGH21740.1| flagellar basal body L-ring protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 237
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 30/251 (11%)
Query: 1 MYRY-------SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M R LC +LL GC + ++ P +P+
Sbjct: 1 MNRISVPRFSVLIASLCGITLLSGCVAPTAK-PNDPYYAPVLP--------------RTP 45
Query: 54 SDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + ++++ L+ D +A +GDI+T+ + A + +++++ L
Sbjct: 46 MSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMTKDSTNSIGL 105
Query: 113 SGGFSLFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ F ++ N Y+G + G G +++ L + V L NG L
Sbjct: 106 TSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADFLPNGIL 165
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G + + +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P
Sbjct: 166 AVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGW 225
Query: 228 GHQLIENLSPL 238
+ LSPL
Sbjct: 226 FDRFF--LSPL 234
>gi|259907637|ref|YP_002647993.1| Flagellar L-ring protein, FlgH [Erwinia pyrifoliae Ep1/96]
gi|224963259|emb|CAX54743.1| Flagellar L-ring protein, FlgH [Erwinia pyrifoliae Ep1/96]
gi|310764857|gb|ADP09807.1| Flagellar L-ring protein, FlgH [Erwinia sp. Ejp617]
Length = 245
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 10/233 (4%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + LL GC I P + + P S S +S
Sbjct: 22 RVAAISAALLLTGCA----HIMQQPLV------QGPTSATPLQMAPTGASGSLFQSGQAM 71
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ +F+D R NVGD LT+ ++ + A + +RN S L S
Sbjct: 72 NYGYQPMFEDRRPRNVGDTLTILLQENVSASKSSSASANRNGSAGMGLEVVPSSVSGALG 131
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ N +G +GKG + I V +L NGNL + G +++ +N +
Sbjct: 132 NGKLDFNAEGQSDFAGKGGAAARNTFTGTITVTVNQLLPNGNLQVVGEKQIAINQGTEFI 191
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + N+VS ++++ARI Y G G E +++ N+SP
Sbjct: 192 RFSGVVNPRTISGSNTVSSTQVSDARIEYVGNGYINESQNMGWLQRVLLNISP 244
>gi|302037630|ref|YP_003797952.1| flagellar L-ring protein FlgH [Candidatus Nitrospira defluvii]
gi|300605694|emb|CBK42027.1| Flagellar L-ring protein FlgH [Candidatus Nitrospira defluvii]
Length = 238
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R+ + L +++ GC +S S +M+ + S
Sbjct: 15 RFIWFGLALCAMV-GCSASPSTKQQKVEMAKLPPPKTM--------------------GS 53
Query: 63 LWR--DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG------ 114
LW+ + A L++D RA+ +GDI+T+ I + T R++++ + G
Sbjct: 54 LWQEENGRAYLYEDLRAMRIGDIITILIVEKHKGSKSADTNAERDSTISNGIGGTGMGYL 113
Query: 115 -GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + ++ GKG+ +R + L I+AIVT +L NG+L + G +
Sbjct: 114 GIPGIRLGGEAKRGFGVDATAKSKFGGKGATNREDTLTGTISAIVTEVLPNGDLRVEGRR 173
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
EV VN E + + + GIVR DV+ N+V IA+A+I Y G G ++ RP ++++
Sbjct: 174 EVTVNSERQIMTIGGIVRRVDVNTKNTVQSSAIADAKIEYSGLGVVDDVQRPGWLVRILD 233
Query: 234 NLSP 237
+ P
Sbjct: 234 WVYP 237
>gi|270262398|ref|ZP_06190669.1| flagellar L-ring protein [Serratia odorifera 4Rx13]
gi|270043082|gb|EFA16175.1| flagellar L-ring protein [Serratia odorifera 4Rx13]
Length = 233
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 12/235 (5%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYS 62
++ L GC P +D P + S ++
Sbjct: 9 KRWLAAMAMLTLSGCA-----------YIPHKPLVDGATTAQPAPAGAPVPNGSIFQTVQ 57
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R N+GD LT+ ++ + A + SRN + ++
Sbjct: 58 PMNYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRNGASKFGVATSPRYLDGL 117
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+++ G GKG + + I V +L NGNL + G +++ +N
Sbjct: 118 LGNARADMDISGDSTFGGKGGANANNTFSGTITVTVNQVLVNGNLHVVGEKQIAINQGTE 177
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV+ ++A+ARI Y G G E + N+SP
Sbjct: 178 FIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 232
>gi|91794992|ref|YP_564643.1| flagellar basal body L-ring protein [Shewanella denitrificans
OS217]
gi|91716994|gb|ABE56920.1| flagellar L-ring protein [Shewanella denitrificans OS217]
Length = 219
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKD 74
GC + + E P + + S K SL+R + LFKD
Sbjct: 12 SGCAAHLPEAETKPD------------TKDWAPPEVDYSLPDAKDGSLYRPGYMLTLFKD 59
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA GDILTV + + T ++ + LSG +T N
Sbjct: 60 KRAYREGDILTVALDEKTYSSKKADTKTNKQQGMSLGLSGSAGSEDVKTNG-----NASL 114
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
SG GS ++ +L+ I V+ +L NG L+I G + +R+N L + G++R D
Sbjct: 115 NRGFSGMGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQGDEYLRLLGLIRADD 174
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
+D N++S +IA+ARI YGG+G + + + PL
Sbjct: 175 IDNTNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL 219
>gi|289666051|ref|ZP_06487632.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 230
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 99/229 (43%), Gaps = 16/229 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LAIACSTLLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 SHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 57 GPGLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMSAPTLLGAPLTVGGL 116
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ +G + +GKG+ +++ ++ + V L NGNL+I G + +R+ +
Sbjct: 117 NVLENSTNGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQ 176
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
V GIVR D+ N+V ++A+ARI+YGG+G + + +
Sbjct: 177 VQGIVRAADIAPDNTVPSSRVADARIAYGGRGAIAQSNAMGWLSRFFNS 225
>gi|71906394|ref|YP_283981.1| flagellar L-ring protein [Dechloromonas aromatica RCB]
gi|110816528|sp|Q47I20|FLGH_DECAR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|71846015|gb|AAZ45511.1| Flagellar L-ring protein [Dechloromonas aromatica RCB]
Length = 219
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 21/238 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R I L + GC + N P + +
Sbjct: 1 MKRLVLISLVLA---AGCSTVPP----------------TNVHQPMTARPSPRFEMANGN 41
Query: 61 YSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S+++ S LF+D RA VGD +TV I A + ++N+ L +F
Sbjct: 42 GSIYQAASSRPLFEDRRARFVGDTITVKITESTTASTKSNNKVDQSNAQKYGLGASTGMF 101
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G+ P +++ A SGKG + + V ++ NGNL++SG ++V +
Sbjct: 102 GRVLPGA-MDMSASSSTAFSGKGEAANNNIFTGNMTVTVIDVMPNGNLLVSGEKQVAIGS 160
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
E + ++G+V P VDA N V KIA+ARI Y G+ ++ + N+ P
Sbjct: 161 EQEFVRISGVVNPSFVDAFNVVDSSKIADARIEYKSSGQVSDGQVMGWLARFFLNVMP 218
>gi|197104379|ref|YP_002129756.1| flagellar L-ring protein FlgH [Phenylobacterium zucineum HLK1]
gi|196477799|gb|ACG77327.1| flagellar L-ring protein FlgH [Phenylobacterium zucineum HLK1]
Length = 254
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 14/249 (5%)
Query: 2 YRYSFIVLCYSSLL----FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS- 56
R + LL C + ++E P+++P+G R + +
Sbjct: 6 MRIRLTAIAAPLLLGASLAACST-VTEAVRGPELAPVGYPAALVPREQNVLPLASAREPL 64
Query: 57 --TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ SLWR A F D RA VGDILTV I IDD A N T SR++
Sbjct: 65 PHPASANSLWRAGARAFFVDQRAGRVGDILTVQIDIDDSAKTINSTTSSRSSGTTMGFPH 124
Query: 115 GFSLFGQQTPQMNGN------LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
L + G ++ +++G G+++RAEK++L IAA+VT +L NGN+
Sbjct: 125 LLGLESSLGRILPGEFDPANAVDVGSKTSNTGAGAVNRAEKISLTIAAVVTGVLPNGNMT 184
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G+QEVR N +IR L V GIVRP+D+ A N++ + +IAEARISYGG+G + + + P G
Sbjct: 185 IQGTQEVRTNTDIRQLTVAGIVRPEDISASNTIRHTQIAEARISYGGRGDISRVQKTPAG 244
Query: 229 HQLIENLSP 237
LIE SP
Sbjct: 245 QSLIERFSP 253
>gi|91225876|ref|ZP_01260845.1| flagellar L-ring protein precursor H [Vibrio alginolyticus 12G01]
gi|269965421|ref|ZP_06179540.1| flagellar L-ring protein precursor [Vibrio alginolyticus 40B]
gi|91189526|gb|EAS75802.1| flagellar L-ring protein precursor H [Vibrio alginolyticus 12G01]
gi|269829900|gb|EEZ84130.1| flagellar L-ring protein precursor [Vibrio alginolyticus 40B]
Length = 259
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 97/259 (37%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGC-------------HSSISEITGIPQMSPMGSSL--------D 39
M R + L + + GC +++ + + S + D
Sbjct: 1 MKRICLLALIAT--MSGCAMLEPIETDEVTQATTVVDAVEGDKSKEESSGIVDTLRGRSD 58
Query: 40 ENNRMPFLGIDFKNSDS---TKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
P + + SL+ H L+ DS+ +GDI+TV + A
Sbjct: 59 PVAGDPAWAPIHPKNKPEHYAAATGSLFSAEHITDLYDDSKPRGIGDIITVTLDETTSAT 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S+ N Q + N + + + + +G S ++ ++ I
Sbjct: 119 KSANADLSKTNEAQMDPLQVGGEELQIGGKYNFSYDLNNSNSFAGDSSAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D++ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDINFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 TGLQQDMQEPGFLARFFNV 257
>gi|94267696|ref|ZP_01290965.1| Flagellar L-ring protein [delta proteobacterium MLMS-1]
gi|93451898|gb|EAT02629.1| Flagellar L-ring protein [delta proteobacterium MLMS-1]
Length = 242
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 20/249 (8%)
Query: 1 MYRYSFIVLCYSSLL-----FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R S I+ + GC ++ +++P E F + +
Sbjct: 1 MKRQSLIMPALLIIGLGLNLAGCSTT---GGSSAEVAP-----SERLPERFALPETERPR 52
Query: 56 STKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ +++ L++D RA ++GDI+ V + T R +SL L+
Sbjct: 53 EVAREGTIYNGGQGLDLYRDGRARDIGDIVQVRVVETSSGQKSADTSTDRGSSLSGGLTS 112
Query: 115 GFSLFG------QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
F L + ++ G G SR + I+A + +GNL+
Sbjct: 113 FFGLENWVNERSSKFALTPNAMDARMNNEFEGGGDTSRDSDVTATISARIVDKTMDGNLV 172
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G QEVRVN+E + + ++G+VRP D+ + N+V ++IA+ARI Y GKG + RP
Sbjct: 173 IRGYQEVRVNNETQFIILSGLVRPDDITSDNAVLSNRIADARIEYSGKGELADKQRPGWL 232
Query: 229 HQLIENLSP 237
+ ++ + P
Sbjct: 233 SRTVDAVWP 241
>gi|114777907|ref|ZP_01452821.1| hypothetical protein SPV1_05779 [Mariprofundus ferrooxydans PV-1]
gi|114551694|gb|EAU54246.1| hypothetical protein SPV1_05779 [Mariprofundus ferrooxydans PV-1]
Length = 231
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 2 YRYSFIVLCYS-SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + +LC + +L GC + ++ D + S+ T S
Sbjct: 3 IRTAICLLCIAPVILGGCMPRVDKVA------------DAQQKQVVNQALATPSEDTSSS 50
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG---FS 117
SLW A L DS+A VGD++TV + A + +S+ ++ L+
Sbjct: 51 GSLWAGGGAGLISDSKASRVGDLVTVLVSESASATRSLGSKQSKKSARDTGLTANIKYGG 110
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G +G++ + G GS + ++ L + ++VT + NGN+ I G +++ +
Sbjct: 111 ALGNADVNPSGSIGMTNSKSFDGSGSTNSSDTLTASVTSVVTTVYPNGNMRIIGKRQLVI 170
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E + + +G++RP D+ N+++ K+A+A ISYGG G + + ++N+ P
Sbjct: 171 NHEPQEITFSGVIRPVDIAPDNTITSAKVAQADISYGGTGSLADTAHEGWLSKTLDNIWP 230
>gi|269138585|ref|YP_003295285.1| flagellar basal body L-ring protein [Edwardsiella tarda EIB202]
gi|267984245|gb|ACY84074.1| flagellar basal body L-ring protein [Edwardsiella tarda EIB202]
gi|304558595|gb|ADM41259.1| Flagellar L-ring protein FlgH [Edwardsiella tarda FL6-60]
Length = 228
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 95/243 (39%), Gaps = 22/243 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S + L + L GC + + + +
Sbjct: 1 MQKHSGVALLCALALSGCA----------------YIPHDRVVTGPTTATPAPATPPRPN 44
Query: 61 YSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
S+++ + LF+D R N+GDILT+ ++ + A + SRN + +
Sbjct: 45 GSIFQGVQPMNYGYQPLFEDRRPRNIGDILTIVLQENVSASKSSSANASRNGTSKFDFAT 104
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
N+ +G +GKG + + I V +L NGNL + G ++
Sbjct: 105 VPRYLEGLFGNARANMEANGDNQFNGKGGANANNTFSGTITVTVDDVLSNGNLKVVGEKQ 164
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + +G+V P+ + +NSV ++A+ARI Y G G E + N
Sbjct: 165 IAINQGTEYIRFSGVVNPRTISGNNSVPSTQVADARIEYVGSGYINEAQNMGWMQRFFLN 224
Query: 235 LSP 237
LSP
Sbjct: 225 LSP 227
>gi|156973590|ref|YP_001444497.1| flagellar basal body L-ring protein [Vibrio harveyi ATCC BAA-1116]
gi|156525184|gb|ABU70270.1| hypothetical protein VIBHAR_01293 [Vibrio harveyi ATCC BAA-1116]
Length = 260
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 96/259 (37%), Gaps = 26/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCH------------------------SSISEITGIPQMSPMGS 36
M + +L + + GC S I M
Sbjct: 1 MMKRI-CLLALITTMSGCAMLEPIETDEVSQATTVVDAVEGDKSKEESNGIIDTMRGRTD 59
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + K + SL+ H L+ DS+ +GDI+TV + +A
Sbjct: 60 PVAGDPAWAPIHPKQKPEHYAAATGSLFSTEHITDLYDDSKPRGIGDIITVTLDETTRAT 119
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ S+ N + + + N + + + +G S ++ ++ I
Sbjct: 120 KSAKADLSKTNDAKMEPLSVGGQELKIGGKYNFSYDLNNTNTFAGDSSAKQSNSISGYIT 179
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D++ N+++ ++++ ARI Y G
Sbjct: 180 VEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDINFDNTIASNRVSNARIQYSG 239
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 240 TGSPQDMQEPGFLARFFNV 258
>gi|120554036|ref|YP_958387.1| flagellar L-ring protein [Marinobacter aquaeolei VT8]
gi|120323885|gb|ABM18200.1| flagellar L-ring protein [Marinobacter aquaeolei VT8]
Length = 230
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 22/235 (9%)
Query: 5 SFIVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ L LL GC S I P+ +P+ + S S
Sbjct: 12 TLATLVVLILLQGCTAMSRPRAIPDDPEFAPVRP--------------QAMMQRDRASGS 57
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+++ S + D+ ALNVGD+LTV ++ +A + T ++N +
Sbjct: 58 IYQVSRNYNFYGDTVALNVGDVLTVTLQESTRASKNADTRIIKDNEIKLPEPNILGKSNF 117
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + + ++ L I VT +L NG L I G + + + +
Sbjct: 118 GIGT-----SLNNERDFKTRADADQSNSLAGSITVSVTEVLPNGVLRIRGEKWLSLTNGE 172
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG+VRP+D+ NSV+ ++IA+ARI+YGG G + + + +
Sbjct: 173 EYIRLTGLVRPRDIQPDNSVASNRIADARIAYGGTGDFDQANQMGWLARFFNSEW 227
>gi|313672188|ref|YP_004050299.1| flagellar l-ring protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312938944|gb|ADR18136.1| flagellar L-ring protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 244
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 22/246 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +++ + GC S + +++ + + K + +
Sbjct: 10 IKMVSLLITSIVIFSGCASKVE------------TNVPTADYKKEIEEYHKRTAPKAPTA 57
Query: 62 SLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL- 118
SLW D + +ALF D + +GDI+ V I A N T S+ +S L+ L
Sbjct: 58 SLWTDIGNSSALFLDYKGRTIGDIVIVKIVESSSATNSNSTSASKTSSYDMGLTNLLGLP 117
Query: 119 -------FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
F ++ + + +G+G +++++ +AA V +L +GNL+I G
Sbjct: 118 TNLGVKNFLGTGNPLDPTVKESTKNSFTGQGKKQKSDQVKATMAARVVDVLPSGNLVIEG 177
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+E+ V+ E + + V GI+R +D+DA N V IA+A+ISY GKG ++ + +
Sbjct: 178 QREIIVDQEKQVITVKGIIRQKDIDADNQVLSTAIADAQISYSGKGVISDSNKKGWLSNI 237
Query: 232 IENLSP 237
I+ + P
Sbjct: 238 IDWVWP 243
>gi|126175143|ref|YP_001051292.1| flagellar basal body L-ring protein [Shewanella baltica OS155]
gi|125998348|gb|ABN62423.1| flagellar L-ring protein [Shewanella baltica OS155]
Length = 224
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 17/221 (7%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRA 77
+ + P +P+ + S+++DS A+ L+ D RA
Sbjct: 18 STQKKPLADDPFYAPVYPE--------------APPTKIAATGSIYQDSQASSLYSDIRA 63
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
VGDI+T+ ++ QA + + + + +L Y
Sbjct: 64 HKVGDIITIVLKESTQAKKSAGNQIKKGSDMSLD-PIFAGGSNISVGGVPLDLRYKDSMN 122
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ + ++ L+ I+A V +L NG+L+I G + + +N+ + VTG+VR QD+
Sbjct: 123 TKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWISINNGDEFIRVTGLVRSQDIKP 182
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
N++ ++A ARI Y G G + + Q + P
Sbjct: 183 DNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|315180482|gb|ADT87396.1| flagellar L-ring protein precursor H [Vibrio furnissii NCTC 11218]
Length = 234
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
RY + L S L GC S+ + S D+ + P + + S
Sbjct: 14 RYVVLALV-SMTLVGCAGRTSDF--------VPPSPDDADFAP---PEINYDVARVSKGS 61
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
L+ + A LF+D RA VGDILTV + ++ T +N++ +
Sbjct: 62 LYTGNAAMTLFQDRRAYRVGDILTVLLNEKTESDKSATTKYGKNSNASLNVPTL-----G 116
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
N + + G +G + + L+ I V +L NG L + G + +++N
Sbjct: 117 THVFDNLSASASGNRDFAGSAASKQGNSLSGSITVTVYQVLPNGVLRVRGEKWLKLNQGD 176
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG VR D+ A N++S +IA+ARI+Y G+G + Q +
Sbjct: 177 EFIRLTGNVRASDISADNTLSSQRIADARITYAGRGSFADTNTAGWLTQFFNSPW 231
>gi|37679150|ref|NP_933759.1| flagellar basal body L-ring protein [Vibrio vulnificus YJ016]
gi|320157106|ref|YP_004189485.1| flagellar L-ring protein FlgH [Vibrio vulnificus MO6-24/O]
gi|61213555|sp|Q7MMV1|FLGH_VIBVY RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|37197892|dbj|BAC93730.1| flagellar basal body L-ring protein FlgH [Vibrio vulnificus YJ016]
gi|319932418|gb|ADV87282.1| flagellar L-ring protein FlgH [Vibrio vulnificus MO6-24/O]
Length = 259
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGC-------------HSSISEITGIPQMSPMGSSL--------D 39
M R S I L L+ GC +++ + + S + D
Sbjct: 1 MKRISLIALVT--LMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSD 58
Query: 40 ENNRMPFLGIDFKNSDS---TKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
P ++ SL+ +H + L+ DS+ VGDI+TV + A
Sbjct: 59 PVAGDPAWAPIHPKQQPEHYAAETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNAS 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S++N + + N + N +G S ++ ++ I
Sbjct: 119 KSANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNNFTGDASAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D+ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 TGTQQDMQEPGFLARFFNV 257
>gi|315931885|gb|EFV10840.1| flagellar L-ring family protein [Campylobacter jejuni subsp. jejuni
327]
Length = 232
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSKLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFKTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|194365677|ref|YP_002028287.1| flagellar basal body L-ring protein [Stenotrophomonas maltophilia
R551-3]
gi|226701934|sp|B4SIL5|FLGH_STRM5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|194348481|gb|ACF51604.1| flagellar L-ring protein [Stenotrophomonas maltophilia R551-3]
Length = 230
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 39 DENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFD 97
P I + T + +++ L+ D RA +VGD+LT+ + + A
Sbjct: 31 PYPTMAPIQPIMPPQAQPT--AGAIYAAGPTLQLYSDRRARDVGDLLTISLLENTTAQTS 88
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
T ++ ++L F + + + G +GKG+ +++ +L +
Sbjct: 89 ANTATNKESNLSLGTPSIFGAPVTLGGKDILSASAKGARDFTGKGNSAQSNRLQGNVTVT 148
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V L NGNL++ G + +R+N + V GIVRP D+ N++ ++AEARI YGG+G
Sbjct: 149 VIQRLPNGNLVVQGQKNLRLNQGDELVQVQGIVRPGDISQDNTIPSSRVAEARIVYGGRG 208
Query: 218 RTTELLRPPIGHQLIEN 234
+ + +
Sbjct: 209 PVAQSNAMGWLSRFFNS 225
>gi|121612803|ref|YP_001000383.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005328|ref|ZP_02271086.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|283956097|ref|ZP_06373584.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni 1336]
gi|166214819|sp|A1VZ42|FLGH_CAMJJ RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|87249515|gb|EAQ72475.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
81-176]
gi|283792417|gb|EFC31199.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni 1336]
Length = 232
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNKYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|294624041|ref|ZP_06702804.1| flagellar L-ring protein precursor [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601660|gb|EFF45634.1| flagellar L-ring protein precursor [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 230
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R F C S+LL GC ++ ++ +M P+ + + + +
Sbjct: 9 RLCFATAC-SALLGGCVAAG-DVRPFAEMRPIVPVV--------------APVAQPTAGA 52
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
++ L+ D RA +VGD+LTV++ A T S+ ++
Sbjct: 53 IYAAGPGLNLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMAAPTLLGAPLT 112
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ G + +GKG+ +++ ++ + V L NGNL+I G + +R+
Sbjct: 113 VGGLNVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGD 172
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ V GIVR D+ N+V K+A+ARI+YGG+G + + + LSP
Sbjct: 173 ELVQVQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 229
>gi|85859198|ref|YP_461400.1| flagellar L-ring protein [Syntrophus aciditrophicus SB]
gi|85722289|gb|ABC77232.1| flagellar L-ring protein [Syntrophus aciditrophicus SB]
Length = 238
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA--LFK 73
GC + P + LD R ++ S+W A+ LF
Sbjct: 26 TGCATK-------PDFTAGEQPLDLTVR----------PEALPVRGSIWPGESASNMLFA 68
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN---- 129
D +A + DI+T+ I Q T SR++ + + L +
Sbjct: 69 DKKARYINDIVTILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSRNVNMGSKI 128
Query: 130 -LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+ G G+ +R +L + A V +L+NGNL+I G +++ +N+E + L ++G
Sbjct: 129 KIGGSSSSTLKGTGNTTRGGQLKGTVTARVVRVLDNGNLVIEGRRQLTINEEDQYLIISG 188
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
I+RP+D+ N + IA+ARI Y GKG + +RP ++++ + P
Sbjct: 189 IIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWP 237
>gi|157961174|ref|YP_001501208.1| flagellar basal body L-ring protein [Shewanella pealeana ATCC
700345]
gi|157846174|gb|ABV86673.1| flagellar L-ring protein [Shewanella pealeana ATCC 700345]
Length = 217
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 18/231 (7%)
Query: 10 CYSSLLFGC-HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ + GC ++ I P +P+ + S+++DS
Sbjct: 1 MLMAAISGCNSTNGKPIADDPYYAPVYPE--------------APPTKIAATGSMYQDSQ 46
Query: 69 AA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
A+ L+ D +AL VGDI+TV + QA S+ L
Sbjct: 47 ASSLYSDIKALKVGDIITVLLMEQTQAKKSANNEISKGTDLSLD-PIYAGGGNVTIGGNP 105
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+L Y + + ++ L+ I+A V +L NGNL+I G + + +N+ + +T
Sbjct: 106 IDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRIT 165
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE-NLSP 237
GIVR QD+ N++ ++A ARI Y G G E+ + + P
Sbjct: 166 GIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWP 216
>gi|86153207|ref|ZP_01071411.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85842933|gb|EAQ60144.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 232
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL + GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFVFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNKYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|159045794|ref|YP_001534588.1| flagellar basal body L-ring protein [Dinoroseobacter shibae DFL 12]
gi|157913554|gb|ABV94987.1| flagellar basal body L-ring protein [Dinoroseobacter shibae DFL 12]
Length = 242
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + +L C I+++ P + S + + + D +
Sbjct: 1 MRIFVPFVACLVVLSAC-GRIADVGQAPDFTASSSGSEYQAMISAPIASDRTIDRAPERA 59
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW + +L D RA GDILTV I IDD+A N + RSR+ S + F L +
Sbjct: 60 SLWSGTRNSLLGDRRAGQNGDILTVVIEIDDRAEISNSSERSRSGSETLAIDDFFGLPQR 119
Query: 122 QTPQMNGNLNYDGGGASSGKGSIS------RAEKLNLLIAAIVTAILENGNLIISGSQEV 175
P++ + S GS S R EKL L +AA V ++ NG I G+QEV
Sbjct: 120 IDPRLPEGASLGSAVGVSSNGSSSGDGSVSRREKLTLRVAATVVGVMPNGVFEIQGTQEV 179
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
RVN E+R L VTG VRP+D+ N ++YDKIA ARISY G+G+ T++ +P G Q+ + +
Sbjct: 180 RVNFELRELIVTGFVRPEDISRQNEITYDKIASARISYAGRGQITDVQQPRYGQQIADII 239
Query: 236 SP 237
P
Sbjct: 240 LP 241
>gi|160876200|ref|YP_001555516.1| flagellar basal body L-ring protein [Shewanella baltica OS195]
gi|217972601|ref|YP_002357352.1| flagellar basal body L-ring protein [Shewanella baltica OS223]
gi|304409975|ref|ZP_07391594.1| flagellar L-ring protein [Shewanella baltica OS183]
gi|307302312|ref|ZP_07582070.1| flagellar L-ring protein [Shewanella baltica BA175]
gi|189044482|sp|A9KWR9|FLGH_SHEB9 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789284|sp|B8E9X5|FLGH_SHEB2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|160861722|gb|ABX50256.1| flagellar L-ring protein [Shewanella baltica OS195]
gi|217497736|gb|ACK45929.1| flagellar L-ring protein [Shewanella baltica OS223]
gi|304351384|gb|EFM15783.1| flagellar L-ring protein [Shewanella baltica OS183]
gi|306914350|gb|EFN44771.1| flagellar L-ring protein [Shewanella baltica BA175]
gi|315268390|gb|ADT95243.1| flagellar L-ring protein [Shewanella baltica OS678]
Length = 224
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 17/221 (7%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRA 77
+ + P +P+ + S+++DS A+ L+ D RA
Sbjct: 18 STQKKPLADDPFYAPVYPE--------------APPTKIAATGSIYQDSQASSLYSDIRA 63
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
VGDI+T+ ++ QA + + + + +L Y
Sbjct: 64 HKVGDIITIVLKESTQAKKSAGNQIKKGSDMSLD-PIFAGGSNVSIGGVPIDLRYKDSMN 122
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ + ++ L+ I+A V +L NG+L+I G + + +N+ + VTG+VR QD+
Sbjct: 123 TKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWISINNGDEFIRVTGLVRSQDIKP 182
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
N++ ++A ARI Y G G + + Q + P
Sbjct: 183 DNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|188534167|ref|YP_001907964.1| flagellar basal body L-ring protein [Erwinia tasmaniensis Et1/99]
gi|188029209|emb|CAO97081.1| Flagellar L-ring protein [Erwinia tasmaniensis Et1/99]
Length = 233
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 88/235 (37%), Gaps = 12/235 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSL 63
++V L GC + P ++ P + S +
Sbjct: 10 RWLVATLLLTLNGCA-----------LVPRKPLVEGSTTAQPLPASPALVNGSIFQGVMP 58
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ LF+D R N+GD LT+ ++ + A + R+ S L+
Sbjct: 59 MNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANAGRDGSAEFGLTATPRALVGLL 118
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
L G SGKG + I V +L NGNL + G +++ +N
Sbjct: 119 GGDKSTLGGSGKNDFSGKGGATANNTFTGTITVTVNQVLPNGNLNVIGEKQIEINQGTEF 178
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + A NSV ++A+ARI Y G G E + N+SP+
Sbjct: 179 IRFSGVVNPRTISASNSVVSTQVADARIEYVGNGYINEAQNMGWLQRFFLNISPM 233
>gi|255322201|ref|ZP_05363347.1| flagellar L-ring protein FlgH [Campylobacter showae RM3277]
gi|255300574|gb|EET79845.1| flagellar L-ring protein FlgH [Campylobacter showae RM3277]
Length = 233
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 19/244 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ L GC + +D + + K ++ +
Sbjct: 1 MRKNIYFCALAAAFLSGC------------LPSADPRIDMKPPVYVEQLPAKQVNNQPNA 48
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH-------RKLS 113
SL+ LF D +A+NV DI+TV I + S+N+++ +
Sbjct: 49 GSLFGRGDNPLFADRKAMNVNDIVTVVISERANQSSSGKHDTSKNSTISLGGGIFTAGSA 108
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+L Q + + +G GS RAE I+A + +LENGN I GS+
Sbjct: 109 PLSTLATQLNKAGDIGFSAGNKNEFTGAGSSVRAEAFTTTISARIIKVLENGNYFIEGSR 168
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N + IA+A+I Y +G R P G +L+E
Sbjct: 169 ELLINGEKQIMQLSGVIRPYDISNANEIDSRYIADAKILYKTEGDVDRATRKPWGTKLME 228
Query: 234 NLSP 237
+ P
Sbjct: 229 AIWP 232
>gi|148980299|ref|ZP_01815986.1| flagellar L-ring protein precursor H [Vibrionales bacterium SWAT-3]
gi|145961318|gb|EDK26628.1| flagellar L-ring protein precursor H [Vibrionales bacterium SWAT-3]
Length = 240
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 17/222 (7%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKD 74
GC + N + + + SL+ + LF+D
Sbjct: 32 AGCAGRQDDFIP-----------PSPNDEAYAPPELDYQVTRVSKGSLYTGTTSMTLFQD 80
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGDILTV + ++ T +++S + + + + D
Sbjct: 81 RRAYRVGDILTVLLDEKTESDKSASTQYGKDSSANITAPTL-----GNKTFEDVSASVDA 135
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
G + + L+ I V +L NG L + G + +++N + +TG VR D
Sbjct: 136 TRDFDGAAASKQGNSLSGSITVTVYNVLPNGVLRVRGEKWLKLNQGDEYIRLTGNVRVDD 195
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ A N++S +IA+ARI+Y G+G + Q +
Sbjct: 196 IQADNTLSSQRIADARITYAGRGSFADTNTAGWLTQFFNSPW 237
>gi|119384849|ref|YP_915905.1| flagellar basal body L-ring protein [Paracoccus denitrificans
PD1222]
gi|119374616|gb|ABL70209.1| flagellar L-ring protein [Paracoccus denitrificans PD1222]
Length = 250
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 7/229 (3%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L C +S+I P M+ S ++ + SLW S AL D
Sbjct: 22 LAAC-GRVSQIGQAPGMTEPESGVEFQAMTSSGHGVQDLPYRPDSAASLWAVSQNALVAD 80
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA GDILTV I IDD+A N +GRSR+++ + ++ L + + + D
Sbjct: 81 RRASQRGDILTVVIEIDDRAEIQNSSGRSRSSADNVGIASMMGLPQRIDEILPEGASMDK 140
Query: 135 ------GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+ G G+ISR +KL L +AA V L NG L I G+QEVRVN E+R L V G
Sbjct: 141 LAEAKASSSYKGSGNISRRDKLTLRVAATVVDRLPNGVLRIQGTQEVRVNYEVRELTVNG 200
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
VRP D+ N ++YD+IA ARISYGG+G+ +++ +P G QL + + P
Sbjct: 201 FVRPSDIGRRNEIAYDRIAGARISYGGRGQISDVQQPRYGQQLADIVLP 249
>gi|254522805|ref|ZP_05134860.1| flagellar L-ring protein FlgH [Stenotrophomonas sp. SKA14]
gi|219720396|gb|EED38921.1| flagellar L-ring protein FlgH [Stenotrophomonas sp. SKA14]
Length = 230
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDD 92
+ + + + +++ L+ D RA +VGD+LT+ + +
Sbjct: 24 VIAGDVRPYAAMAPIQPIMPPQAAPTAGAIYAAGPTLQLYSDRRARDVGDLLTITLLENT 83
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
A T ++ ++L+ + + + G +GKG+ +++ +L
Sbjct: 84 TAQTSANTATNKESNLNLGTPSILGAPVTLGGKDILSASATGKRDFTGKGNSAQSNRLQG 143
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
+ V L NGNL++ G + +R+N + V GIVRP D+ N++ ++AEARI
Sbjct: 144 SVTVTVVQRLPNGNLVVQGQKNLRLNQGDELVQVQGIVRPGDISQDNTIPSSRVAEARIV 203
Query: 213 YGGKGRTTELLRPPIGHQLIEN 234
YGG+G + + +
Sbjct: 204 YGGRGPVAQSNAMGWLSRFFNS 225
>gi|296445181|ref|ZP_06887141.1| flagellar L-ring protein [Methylosinus trichosporium OB3b]
gi|296257355|gb|EFH04422.1| flagellar L-ring protein [Methylosinus trichosporium OB3b]
Length = 240
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 136/227 (59%), Gaps = 9/227 (3%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC + +I P MSP+GS L+ + G D + ++ L++D R
Sbjct: 16 GCATDPRDIGREPHMSPVGSGLNTVDDQLPTGSI---RDGALGPHMRLDENRINLYRDVR 72
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP------QMNGNL 130
A++ GD++TV+I +DD+AV N T RSR++ + + S F + +
Sbjct: 73 AMSAGDVVTVNISMDDKAVLGNSTDRSRDSKVKSEWSFLFDFLAGGSGATEHKWNGTISN 132
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ ++ G+GSI+R+E++ L IAA+VTA+L NGNL++ GSQE+RVN E+R L + GI
Sbjct: 133 DLQSSSSTQGQGSINRSEQIRLSIAAVVTAVLPNGNLVLRGSQEIRVNYELRVLTIAGIA 192
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
RP+D+ N++SYDKIAEAR+SYGG+GR +E+ +P G Q+ + +P
Sbjct: 193 RPRDIAKDNTISYDKIAEARVSYGGRGRLSEVQQPAWGQQVYDIFAP 239
>gi|296103608|ref|YP_003613754.1| Flagellar L-ring protein, FlgH [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058067|gb|ADF62805.1| Flagellar L-ring protein, FlgH [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 228
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 79/198 (39%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P S ++ + +F+D R NVGD LT+ ++ + A +
Sbjct: 30 PTTATPLPMAPAATGGSLFQAGQAMNYGYQPMFEDRRPRNVGDTLTILLQENVSASKSSS 89
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN S L + + +G +GKG + I V
Sbjct: 90 ASANRNGSAGMGLIAVPTKLNGWLGDGKADFEAEGKNDFAGKGGAAARNTFTGTITVTVK 149
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G
Sbjct: 150 ELLPNGNLGVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYI 209
Query: 220 TELLRPPIGHQLIENLSP 237
E +L NLSP
Sbjct: 210 NEAQNMGWLQRLFLNLSP 227
>gi|320173531|gb|EFW48727.1| Flagellar L-ring protein FlgH [Shigella dysenteriae CDC 74-1112]
gi|320186974|gb|EFW61687.1| Flagellar L-ring protein FlgH [Shigella flexneri CDC 796-83]
Length = 232
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++ +ARI Y G G E + NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|57236990|ref|YP_178791.1| flagellar basal body L-ring protein [Campylobacter jejuni RM1221]
gi|157414975|ref|YP_001482231.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|218562326|ref|YP_002344105.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|315124190|ref|YP_004066194.1| flagellar L-ring protein precursor [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|14548049|sp|Q9PPM0|FLGH_CAMJE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81353802|sp|Q5HV94|FLGH_CAMJR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|172047100|sp|A8FLB7|FLGH_CAMJ8 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|57165794|gb|AAW34573.1| flagellar L-ring protein FlgH [Campylobacter jejuni RM1221]
gi|112360032|emb|CAL34824.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|157385939|gb|ABV52254.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni 81116]
gi|307747612|gb|ADN90882.1| Flagellar L-ring protein [Campylobacter jejuni subsp. jejuni M1]
gi|315017912|gb|ADT66005.1| flagellar L-ring protein precursor [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315058150|gb|ADT72479.1| Flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
S3]
gi|315926801|gb|EFV06175.1| flagellar L-ring family protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 232
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|260597448|ref|YP_003210019.1| flagellar basal body L-ring protein [Cronobacter turicensis z3032]
gi|260216625|emb|CBA29923.1| Flagellar L-ring protein [Cronobacter turicensis z3032]
Length = 232
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I + + L GC S +P+ + + + S+++
Sbjct: 11 IAIALALTLSGCAWVPS--------TPLVQGATTAQPA--------PAPAPVVNGSIFQS 54
Query: 67 ------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ LF+D R NVGD LT++++ + A + SR+ + L
Sbjct: 55 VQQINYGYQPLFEDRRPRNVGDTLTIELQENVSASKSSSANASRDGKTNFGLDTVPRYLQ 114
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+++ GG +GKG + + + + V +L NGNL + G +++ +N
Sbjct: 115 GLFGNARADISASGGNTFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQG 174
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 175 TEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|333008283|gb|EGK27757.1| flagellar L-ring family protein [Shigella flexneri K-272]
gi|333019773|gb|EGK39045.1| flagellar L-ring family protein [Shigella flexneri K-227]
Length = 232
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V + + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 181 SGVVNSRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
>gi|224584316|ref|YP_002638114.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224468843|gb|ACN46673.1| flagellar L-ring protein precursor [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 221
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ + L GC ++ P+ P G + S +S
Sbjct: 1 MALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGSIFQSAQPINYG 50
Query: 68 HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
+ LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 YQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSR 110
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
++ GG + +GKG + + + + V +L NGNL + G +++ +N + +
Sbjct: 111 ADMEASGGNSFNGKGGANASNTFSGTLTVTVVQVLANGNLHVVGEKQIAINQGTEFIRFS 170
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
G+V P+ + NSV ++A+ARI Y G G E + NLSP+
Sbjct: 171 GVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 221
>gi|153001469|ref|YP_001367150.1| flagellar basal body L-ring protein [Shewanella baltica OS185]
gi|166214827|sp|A6WQJ8|FLGH_SHEB8 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|151366087|gb|ABS09087.1| flagellar L-ring protein [Shewanella baltica OS185]
Length = 224
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 17/221 (7%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRA 77
+ + P +P+ + S+++DS A+ L+ D RA
Sbjct: 18 STQKKPLADDPFYAPVYPE--------------APPTKIAATGSIYQDSQASSLYSDIRA 63
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
VGDI+T+ ++ QA + + + + +L Y
Sbjct: 64 HKVGDIITIVLKESTQAKKSAGNQIKKGSDMSLD-PIFAGGSNISVGGVPIDLRYKDSMN 122
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ + ++ L+ I+A V +L NG+L+I G + + +N+ + VTG+VR QD+
Sbjct: 123 TKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWISINNGDEFIRVTGLVRSQDIKP 182
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
N++ ++A ARI Y G G + + Q + P
Sbjct: 183 DNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|296135670|ref|YP_003642912.1| flagellar L-ring protein [Thiomonas intermedia K12]
gi|295795792|gb|ADG30582.1| flagellar L-ring protein [Thiomonas intermedia K12]
Length = 237
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 14/221 (6%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSR 76
C ++ ++ + P+ + + + ++W+ +LF+DSR
Sbjct: 29 CATAPQHLSSD-SLKPLPIPAEPESMNAHTP-----------NGAIWQPGTNVSLFEDSR 76
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGD++TV I+ + A T ++++ + LS F + ++
Sbjct: 77 AHRVGDLITVLIQENANATKSTNTTVNKSDDVSAGLSSFFGKPFTVGG-YSPSMGLTSST 135
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
G G+ S++ + A V ++ NGN+ ISG +EV +N + V G+VR DV
Sbjct: 136 KFGGNGATSQSNTFTTTLQATVVQVMSNGNMQISGQKEVMLNGGHEYIRVAGVVRAADVS 195
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N+V +IA AR+ Y G G + P +L P
Sbjct: 196 PQNTVLSTQIANARVEYSGTGDVYAAAKVPWLASFFLSLWP 236
>gi|301029706|ref|ZP_07192760.1| flagellar L-ring protein FlgH [Escherichia coli MS 196-1]
gi|299877394|gb|EFI85605.1| flagellar L-ring protein FlgH [Escherichia coli MS 196-1]
gi|332092936|gb|EGI98004.1| flagellar L-ring family protein [Shigella dysenteriae 155-74]
Length = 217
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 10/227 (4%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
L GC S +P+ + P G + S +S + L
Sbjct: 1 MLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINYGYQPL 50
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
F+D R N+GD LT+ ++ + A + SR+ + ++
Sbjct: 51 FEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVE 110
Query: 132 YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
GG +GKG + + + + V +L NGNL + G +++ +N + +G+V
Sbjct: 111 ASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVN 170
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 171 PRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 217
>gi|332162898|ref|YP_004299475.1| Lateral flagellar L-ring protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604255|emb|CBY25753.1| flagellar L-ring protein FlgH [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667128|gb|ADZ43772.1| Lateral flagellar L-ring protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863348|emb|CBX73471.1| flagellar L-ring protein 2 [Yersinia enterocolitica W22703]
Length = 221
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
++ DS KK L++ ++ +L +D RA +GDILTV + Q+ +T +
Sbjct: 32 APPVNQTQVDSVKKGGGLFQPAYNWSLLQDRRAYRIGDILTVKLDESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
N + + + + G G + ++ L I V +L N
Sbjct: 92 KNDMSLGIPEVLGKKLNKFGG-----SISGKRDFDGSATSAQQNMLRGSITVAVHQVLPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L+I G + + +N + VTG+VR DV+ NSVS +IA ARISY G+G ++
Sbjct: 147 GVLVIRGEKWLTLNQGDEYMRVTGLVRADDVERDNSVSSQRIANARISYAGRGALSDANS 206
Query: 225 PPIGHQLIEN-LSPL 238
+ + L P+
Sbjct: 207 AGWLTRFFNHPLFPI 221
>gi|296157453|ref|ZP_06840288.1| flagellar L-ring protein [Burkholderia sp. Ch1-1]
gi|295892225|gb|EFG72008.1| flagellar L-ring protein [Burkholderia sp. Ch1-1]
Length = 232
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 21/235 (8%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + L + L GC + P + S S++
Sbjct: 16 ALVQLTLLAALGGCG-----------LVPKQPITQQPMTALPPMPPQAQSP-----GSIF 59
Query: 65 RDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R NVGDILT+ I+ + A + +R+ + + + L G
Sbjct: 60 NPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGLF 119
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
NL+ G SG G + + N I VT +L NGNL++SG +++ +N
Sbjct: 120 GK---TNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPNGNLMVSGEKQMLINQGDE 176
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P + N+V ++A+A+I Y KG E + N+SP
Sbjct: 177 FVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSP 231
>gi|89075498|ref|ZP_01161909.1| flagellar L-ring protein precursor [Photobacterium sp. SKA34]
gi|89048770|gb|EAR54341.1| flagellar L-ring protein precursor [Photobacterium sp. SKA34]
Length = 261
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 27/262 (10%)
Query: 1 MYR--YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSS--------------------L 38
M R ++ S L GC S+ ++ G +
Sbjct: 1 MNRQWMKRSLILLSLALTGCVSTPPDVAGSDIEKATTNVDAVEGKEKESKGLIDRIRKRE 60
Query: 39 DENNRMPFLGIDFKNSDSTK---KSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQA 94
D P + SL+ S L+ D++ +GDI+T+ + A
Sbjct: 61 DPEAGDPAWNPVRPQDKPEHYATATGSLFNQSQVQDLYDDTKPRGIGDIVTILLEEKTAA 120
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ ++ L+ K + + +G S ++ + I
Sbjct: 121 KKSASSDLDKSTDLNMK-PIELGGKPVTIRDYSLSYGMSNNNTFAGSTSADQSNSIKGSI 179
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
+ V +L NGNL + G + + +N + V+G +RP D+ N+++ +I+ ARI Y
Sbjct: 180 SVEVVEVLNNGNLAVRGEKWLMLNTGEEYIRVSGHIRPDDISQDNTIASTRISNARIQYS 239
Query: 215 GKGRTTELLRPPIGHQLIENLS 236
G G ++ +
Sbjct: 240 GTGDRQDIQEQNWLSRFFNVAF 261
>gi|89068733|ref|ZP_01156119.1| flagellar L-ring protein precursor [Oceanicola granulosus HTCC2516]
gi|89045696|gb|EAR51758.1| flagellar L-ring protein precursor [Oceanicola granulosus HTCC2516]
Length = 250
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 17 GCHSSI----SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF 72
GC S+ ++ + ++P + +S SLW F
Sbjct: 16 GCASAPAFNREPAVSNLDLTRQTMPEVASVQVPLPVPQPVPVPTRAESASLWAPGARGFF 75
Query: 73 KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG---- 128
D RA VGDILT+DI IDD+A N + R R+ + + G
Sbjct: 76 GDQRATAVGDILTIDIEIDDEASLANASSRERDGEGSVAMPTALGYENHLANVIPGISQD 135
Query: 129 -----NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ +SG G+I R E + L +AA+V +L NGN++++G QEV+VNDE+R
Sbjct: 136 ELSDPLIGLRSETNASGSGTIRRNESIKLKVAAMVIQLLPNGNMVVAGRQEVKVNDELRE 195
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L V GI+RPQD+ +N+V YDKIAEARISYGG+G + G +++ + P
Sbjct: 196 LRVAGIIRPQDIQMNNTVPYDKIAEARISYGGEGSLSRTQTRGYGEDVMDIVLP 249
>gi|156934437|ref|YP_001438353.1| flagellar basal body L-ring protein [Cronobacter sakazakii ATCC
BAA-894]
gi|156532691|gb|ABU77517.1| hypothetical protein ESA_02268 [Cronobacter sakazakii ATCC BAA-894]
Length = 235
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 22/238 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I + + L GC S +P+ + + + S+++
Sbjct: 14 IAIALALTLSGCAWVPS--------TPLVQGATTAQPA--------PAPAPVVNGSIFQS 57
Query: 67 ------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ LF+D R NVGD LT++++ + A + SR+ L
Sbjct: 58 VQQINYGYQPLFEDRRPRNVGDTLTIELQENVSASKSSSANASRDGKTSFGLDTVPRYLQ 117
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+++ GG +GKG + + + + V +L NGNL + G +++ +N
Sbjct: 118 GLFGNARADVSASGGNTFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQG 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 178 TEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 235
>gi|153834476|ref|ZP_01987143.1| flagellar L-ring protein FlgH [Vibrio harveyi HY01]
gi|269961602|ref|ZP_06175964.1| flagellar L-ring protein precursor [Vibrio harveyi 1DA3]
gi|148869172|gb|EDL68204.1| flagellar L-ring protein FlgH [Vibrio harveyi HY01]
gi|269833643|gb|EEZ87740.1| flagellar L-ring protein precursor [Vibrio harveyi 1DA3]
Length = 259
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 95/259 (36%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCH------------------------SSISEITGIPQMSPMGS 36
M R + L + + GC S I +
Sbjct: 1 MKRICLLALITT--MSGCAMLEPIETDEVSQATTVVDAVEGDKSKEESSGIIDTLRGRTD 58
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + K + SL+ H L+ DS+ +GDI+TV + +A
Sbjct: 59 PVAGDPAWAPIHPKQKPEHYAAATGSLFSTEHITDLYDDSKPRGIGDIITVTLDETTRAT 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S+ N + Q + N + + + +G S ++ ++ I
Sbjct: 119 KSANADLSKTNDAKMEPLSVGGQELQIGGKYNFSYDLNNTNTFAGDSSAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D++ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDINFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 TGSPQDMQEPGFLARFFNV 257
>gi|27363702|ref|NP_759230.1| flagellar basal body L-ring protein [Vibrio vulnificus CMCP6]
gi|31076699|sp|Q8DFJ1|FLGH_VIBVU RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|27359818|gb|AAO08757.1| Flagellar L-ring protein flgH [Vibrio vulnificus CMCP6]
Length = 259
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGC-------------HSSISEITGIPQMSPMGSSL--------D 39
M R S I L ++ GC +++ + + S + D
Sbjct: 1 MKRISLIALVT--IMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSD 58
Query: 40 ENNRMPFLGIDFKNSDS---TKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
P ++ SL+ +H + L+ DS+ VGDI+TV + A
Sbjct: 59 PVAGDPAWAPIHPKQQPEHYAAETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNAS 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S++N + + N + N +G S ++ ++ I
Sbjct: 119 KSANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNNFTGDASAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D+ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 TGTQQDMQEPGFLARFFNV 257
>gi|108868295|sp|Q2LT21|FLGH_SYNAS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 232
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA--LFK 73
GC + P + LD R ++ S+W A+ LF
Sbjct: 20 TGCATK-------PDFTAGEQPLDLTVR----------PEALPVRGSIWPGESASNMLFA 62
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN---- 129
D +A + DI+T+ I Q T SR++ + + L +
Sbjct: 63 DKKARYINDIVTILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSRNVNMGSKI 122
Query: 130 -LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+ G G+ +R +L + A V +L+NGNL+I G +++ +N+E + L ++G
Sbjct: 123 KIGGSSSSTLKGTGNTTRGGQLKGTVTARVVRVLDNGNLVIEGRRQLTINEEDQYLIISG 182
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
I+RP+D+ N + IA+ARI Y GKG + +RP ++++ + P
Sbjct: 183 IIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWP 231
>gi|120598235|ref|YP_962809.1| flagellar basal body L-ring protein [Shewanella sp. W3-18-1]
gi|146293687|ref|YP_001184111.1| flagellar basal body L-ring protein [Shewanella putrefaciens CN-32]
gi|120558328|gb|ABM24255.1| flagellar L-ring protein [Shewanella sp. W3-18-1]
gi|145565377|gb|ABP76312.1| flagellar L-ring protein [Shewanella putrefaciens CN-32]
gi|319427086|gb|ADV55160.1| flagellar L-ring protein [Shewanella putrefaciens 200]
Length = 224
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 32 SPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRI 90
+ D+ P + S+++DS A +L+ D RA VGDI+T+ ++
Sbjct: 19 TQKKPIADDPFYAPVYP--EAPPTKIAATGSIYQDSQAASLYSDIRAHKVGDIITIVLKE 76
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
QA + + + + + +L Y + + ++ L
Sbjct: 77 ATQAKKSAGNQIKKGSDMSLD-PIYAAGSNISVAGVPLDLRYKDSMNTKRESDADQSNSL 135
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
+ I+A + +L NGNL++ G + + +N+ + VTGIVR QD+ N++ ++A AR
Sbjct: 136 DGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQDIKPDNTIDSTRMANAR 195
Query: 211 ISYGGKGRTTELLRPPIGHQLIEN-LSP 237
I Y G G + + Q + P
Sbjct: 196 IQYSGTGTFADAQKVGWLSQFFMSDWWP 223
>gi|319944132|ref|ZP_08018410.1| flagellar L-ring protein FlgH [Lautropia mirabilis ATCC 51599]
gi|319742626|gb|EFV95035.1| flagellar L-ring protein FlgH [Lautropia mirabilis ATCC 51599]
Length = 253
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 92/233 (39%), Gaps = 13/233 (5%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+++ L GC + + +D + + + S+++
Sbjct: 33 LLVLSMLALAGCSTVMPPRAR----------IDTPMVDHNRLASMRAVPQREANGSIFQA 82
Query: 67 S-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+F+D RA GD+LT+ I A + + R K + + +
Sbjct: 83 GATRNMFEDRRARQPGDMLTILIEERLVAKHSSNSTIDRKGGGSAKFGALPFVKADKLGK 142
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ L+ + GKG+ + I V +L NGNL++SG ++V +N + +L
Sbjct: 143 L--GLDASTSNSFEGKGAAGNENQFAGTITVTVVDVLPNGNLVVSGEKQVGINQGVETLK 200
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
G+V P + N+VS ++A+AR+ G G ++ + ++ P+
Sbjct: 201 FAGVVDPLTIMPGNTVSSTQVADARMQVRGAGDIDKVQTTGWLTRFFLSVMPI 253
>gi|28897556|ref|NP_797161.1| flagellar basal body L-ring protein [Vibrio parahaemolyticus RIMD
2210633]
gi|153839681|ref|ZP_01992348.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
gi|260364614|ref|ZP_05777216.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus K5030]
gi|260878281|ref|ZP_05890636.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AN-5034]
gi|260898111|ref|ZP_05906607.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus Peru-466]
gi|260901957|ref|ZP_05910352.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ4037]
gi|14548053|sp|Q9X9J5|FLGH1_VIBPA RecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body
L-ring protein 1; Flags: Precursor
gi|5361011|gb|AAD42918.1|U12817_12 polar flagellar FlgH homolog [Vibrio parahaemolyticus]
gi|28805768|dbj|BAC59045.1| flagellar L-ring protein precursor FlgH [Vibrio parahaemolyticus
RIMD 2210633]
gi|149746791|gb|EDM57779.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
gi|308086115|gb|EFO35810.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus Peru-466]
gi|308090111|gb|EFO39806.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AN-5034]
gi|308106777|gb|EFO44317.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ4037]
gi|308115099|gb|EFO52639.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus K5030]
gi|328473450|gb|EGF44298.1| flagellar basal body L-ring protein [Vibrio parahaemolyticus 10329]
Length = 259
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 27/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCH------------------------SSISEITGIPQMSPMGS 36
M R + L + + GC S + +
Sbjct: 1 MKRICLLALITT--MSGCAMLEPIETDEVTQATTVVDAVEGDKSKDESSGIVDTLRGRND 58
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + K + SL+ H L+ DS+ +GDI+TV + A
Sbjct: 59 PVAGDPAWAPIHPKQKPEHYAAATGSLFSPEHITDLYDDSKPRGIGDIITVTLDETTSAT 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S+ N + + N + + + +G S ++ ++ I
Sbjct: 119 KSANADLSKTNEAQMDPLQVGGEELKVGGKYNFSYDLNNTNTFAGDSSAKQSNSISGYIT 178
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D++ N+++ ++++ ARI Y G
Sbjct: 179 VEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDINFDNTIASNRVSNARIQYSG 238
Query: 216 KGRTTELLRPPIGHQLIEN 234
G + ++ P +
Sbjct: 239 TGLSQDMQEPGFLARFFNV 257
>gi|91785631|ref|YP_560837.1| flagellar basal body L-ring protein [Burkholderia xenovorans LB400]
gi|91689585|gb|ABE32785.1| Flagellar L-ring protein [Burkholderia xenovorans LB400]
Length = 234
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 21/235 (8%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + L + L GC + P + S S++
Sbjct: 18 ALVQLTLLAALGGCG-----------LVPKQPITQQPMTALPPMPPQAQSP-----GSIF 61
Query: 65 RDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R NVGDILT+ I+ + A + +R+ + + + L G
Sbjct: 62 NPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGLF 121
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
NL+ G SG G + + N I VT +L NGNL++SG +++ +N
Sbjct: 122 GK---TNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPNGNLMVSGEKQMLINQGDE 178
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P + N+V ++A+A+I Y KG E + N+SP
Sbjct: 179 FVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSP 233
>gi|86151632|ref|ZP_01069846.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
260.94]
gi|88596875|ref|ZP_01100111.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
84-25]
gi|148926655|ref|ZP_01810336.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni CG8486]
gi|85841261|gb|EAQ58509.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
260.94]
gi|88190564|gb|EAQ94537.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
84-25]
gi|145845174|gb|EDK22269.1| putative flagellar L-ring protein precursor [Campylobacter jejuni
subsp. jejuni CG8486]
gi|284925943|gb|ADC28295.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
jejuni IA3902]
Length = 232
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNIESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|153951340|ref|YP_001398367.1| flagellar basal body L-ring protein [Campylobacter jejuni subsp.
doylei 269.97]
gi|166214818|sp|A7H4D7|FLGH_CAMJD RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|152938786|gb|ABS43527.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. doylei
269.97]
Length = 232
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVIIQESTTQSTQANKATSRTNTSNLDGGTLTGSSG 107
Query: 121 QQTPQM-------NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVASALDKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|323171067|gb|EFZ56716.1| flagellar L-ring family protein [Escherichia coli LT-68]
Length = 221
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 92/239 (38%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ LL GC S + + ++
Sbjct: 1 MKNYLWLVAQLPLLSGCESQAILVKKDDAYF-------------APPKTEAPPPADGRAG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
++ + +L D RA VGDILTV + Q+ +T ++N++ F
Sbjct: 48 GVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGKSNTVDIGAPTIFG--- 104
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + + D G + + L I V A+ NG L I G + + +N
Sbjct: 105 --HTKDKLSGSIDANRDFDGSATSQQQNSLRREITVSVHAVQPNGILEIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ ++G+VR D+ NSVS +IA+ARISY G+G ++ +L + L P+
Sbjct: 163 DEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFPI 221
>gi|157371204|ref|YP_001479193.1| flagellar basal body L-ring protein [Serratia proteamaculans 568]
gi|157322968|gb|ABV42065.1| flagellar L-ring protein [Serratia proteamaculans 568]
Length = 233
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 12/235 (5%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYS 62
++ L GC P +D P + S ++
Sbjct: 9 KRWLAAMVMLTLGGCA-----------YIPHKPLVDGTTTAQPAPAGAPVPNGSIFQTVQ 57
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R NVGD LT+ ++ + A + SRN + ++
Sbjct: 58 PMNYGYQPLFEDRRPRNVGDTLTIALQENVSASKSSSANASRNGASKFGVATAPRYLDGL 117
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
++ G GKG + N I V +L NGNL + G +++ +N
Sbjct: 118 LGNARADMEMSGDSTFGGKGGANANNTFNGTITVTVNQVLVNGNLHVVGEKQIAINQGTE 177
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + NSV+ ++A+ARI Y G G E + N+SP
Sbjct: 178 FIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNVSP 232
>gi|86149820|ref|ZP_01068049.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839638|gb|EAQ56898.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 232
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL + GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFVFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNIESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGSSG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 VVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|330445351|ref|ZP_08309003.1| flagellar L-ring protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489542|dbj|GAA03500.1| flagellar L-ring protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 261
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 90/262 (34%), Gaps = 27/262 (10%)
Query: 1 MYRYSF--IVLCYSSLLFGCHSSISEITGIPQMSPMGSS--------------------L 38
M R ++ S +L GC S+ ++ G +
Sbjct: 1 MNRQWMKGSLVVLSLVLTGCMSTPPDVAGSDIEKATTNVDAVEGKEKESKGLIDMIRKRE 60
Query: 39 DENNRMPFLGIDFKNSDSTK---KSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQA 94
D P + SL+ L+ D++ +GDI+T+ + A
Sbjct: 61 DPEAGDPAWNPVRPQDKPEHYATATGSLFNQVQVQDLYDDTKPRGIGDIVTILLEEKTAA 120
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ ++ L+ K N + +G S ++ + I
Sbjct: 121 KKSASSDLDKSTDLNMK-PIELGGKPVTIRDYNLSYGMSNNNTFAGSTSADQSNSIKGSI 179
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
+ V +L NGNL+I G + + +N + V+G +RP D+ N+++ +I+ ARI Y
Sbjct: 180 SVEVVEVLNNGNLVIRGEKWLTLNTGDEYIRVSGHIRPDDISQDNTIASTRISNARIQYS 239
Query: 215 GKGRTTELLRPPIGHQLIENLS 236
G G ++ +
Sbjct: 240 GTGDRQDVQDQNWLSRFFNVAF 261
>gi|163784420|ref|ZP_02179304.1| hypothetical protein HG1285_04703 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880311|gb|EDP73931.1| hypothetical protein HG1285_04703 [Hydrogenivirga sp. 128-5-R1-1]
Length = 232
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 18/232 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+VL L C P + + + SL+
Sbjct: 17 LVLFAIFLFVSCAEKKE------TYKPFNP----------KPPEIVDENIKTPPGSLYT- 59
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF D +AL VGD +T+ I + Q+ ++ +L+ L L +
Sbjct: 60 GYDNLFSDDKALRVGDTITIKITENISGQGSAQSDAKKDTNLNYDLPSPTWLGKNLVKKT 119
Query: 127 N-GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + G GS R KL I A V + NGNL + G + +R+ND+ + L
Sbjct: 120 PIAGMTAKSSDSFKGSGSTKRQAKLIATITARVVKVYPNGNLFVVGKKIIRINDDTQILK 179
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
++GIV+P + NSV +I++ + Y GKG + RP + + + P
Sbjct: 180 ISGIVKPTYIQQDNSVDSSRISDMYVEYNGKGYIADHQRPGWLARFLAKIWP 231
>gi|157959899|ref|YP_001499933.1| flagellar basal body L-ring protein [Shewanella pealeana ATCC
700345]
gi|157844899|gb|ABV85398.1| flagellar L-ring protein [Shewanella pealeana ATCC 700345]
Length = 224
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ LL GC S I E+ P + + + S K S++R
Sbjct: 10 IGLVLLLSGCISHIPELDTKP------------GKPEWAPPEIDYSLPDAKDGSVYRPGF 57
Query: 69 A-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
LFKD RA GDILTV + + T ++N L +
Sbjct: 58 MLTLFKDKRAFREGDILTVALDEKTYSSKSADTKTNKNTGLSLD-----GQGTTGNNSIA 112
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
G+ + G + SG GS ++ +L+ I V +L NG L+I G + +R+N L +
Sbjct: 113 GSGEANLGSSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQGDEYLRLL 172
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS-PL 238
G++R D+ N++S +IA+ARI YGG+G T+ R + + PL
Sbjct: 173 GLIRTDDIGNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL 224
>gi|163802600|ref|ZP_02196492.1| flagellar L-ring protein precursor [Vibrio sp. AND4]
gi|159173683|gb|EDP58502.1| flagellar L-ring protein precursor [Vibrio sp. AND4]
Length = 259
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 95/272 (34%), Gaps = 53/272 (19%)
Query: 1 MYRYSFIVLCYSSLLFGCH-------------------------------------SSIS 23
M R + L + + GC
Sbjct: 1 MKRICLLALITT--MSGCAMLKPIETDEVSQATTVVDAVEGDKSKDESSGIIDTLRGRTD 58
Query: 24 EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGD 82
+ G P SP+ + + SL+ H L+ DS+ VGD
Sbjct: 59 PVAGDPAWSPIHPKQKPEHYA-------------AATGSLFSADHITDLYDDSKPRGVGD 105
Query: 83 ILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKG 142
I+TV + +A S+ N + Q + N + + + +G
Sbjct: 106 IITVTLDETTRATKSANADLSKTNDAKMEPLSVGGQELQIGGKYNFSYDLNNTNTFAGDS 165
Query: 143 SISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVS 202
S ++ ++ I V +L NGNL+I G + + +N + ++G +RP D++ N+++
Sbjct: 166 SAKQSNSISGYITVEVIEVLANGNLVIRGEKWMTLNTGDEYIRLSGTIRPDDINFDNTIA 225
Query: 203 YDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
++++ ARI Y G G ++ P +
Sbjct: 226 SNRVSNARIQYSGTGLPQDMQEPGFLARFFNV 257
>gi|311694364|gb|ADP97237.1| flagellar basal body L-ring protein [marine bacterium HP15]
Length = 233
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 23/226 (10%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFK 73
GC S + P+ +P+ S S+++ S +
Sbjct: 27 GCTAMSRPRAVPDDPEFAPVRP--------------QAMMQRDSASGSIYQVSRNYNFYG 72
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYD 133
D+ ALNVGD+LTV+++ A + +T +++N +++
Sbjct: 73 DTVALNVGDVLTVNLQESTSASKNAETSITKDNETTLPNPTILGKDNFGINT-----SFN 127
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
G ++ L I VT +L NG L I G + + + + + +TG+VRPQ
Sbjct: 128 HERDFQGAAEADQSNSLAGSITVTVTEVLPNGVLRIRGEKWLSLTNGDEYIRLTGLVRPQ 187
Query: 194 DVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
D+ N+V+ ++IA+AR +YGG G + + + + PL
Sbjct: 188 DIQPDNTVASNRIADARFAYGGTGDFDQANQMGWLARFFNSEWWPL 233
>gi|194444848|ref|YP_002040434.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451511|ref|YP_002045179.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469566|ref|ZP_03075550.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194734750|ref|YP_002114179.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195874175|ref|ZP_03080178.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197248047|ref|YP_002146863.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197265095|ref|ZP_03165169.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197300930|ref|ZP_03166241.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|198244937|ref|YP_002215957.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|204930741|ref|ZP_03221614.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205358037|ref|ZP_02575136.2| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205358793|ref|ZP_02659164.2| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205359396|ref|ZP_02669711.2| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205360098|ref|ZP_03224515.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205360746|ref|ZP_02686000.2| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|213424683|ref|ZP_03357448.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|194403511|gb|ACF63733.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409815|gb|ACF70034.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194455930|gb|EDX44769.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194710252|gb|ACF89473.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195630338|gb|EDX48964.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211750|gb|ACH49147.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243350|gb|EDY25970.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289795|gb|EDY29156.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939453|gb|ACH76786.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204320200|gb|EDZ05404.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205328053|gb|EDZ14817.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205331927|gb|EDZ18691.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205336407|gb|EDZ23171.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205340986|gb|EDZ27750.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205347398|gb|EDZ34029.1| flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|321223798|gb|EFX48861.1| Flagellar L-ring protein FlgH [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 221
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ + L GC ++ P+ P G + S +S
Sbjct: 1 MALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGSIFQSAQPINYG 50
Query: 68 HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
+ LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 YQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSR 110
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
++ GG + +GKG + + + + V +L NGNL + G +++ +N + +
Sbjct: 111 ADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRFS 170
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
G+V P+ + NSV ++A+ARI Y G G E + NLSP+
Sbjct: 171 GVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 221
>gi|303328378|ref|ZP_07358816.1| flagellar L-ring protein FlgH [Desulfovibrio sp. 3_1_syn3]
gi|302861708|gb|EFL84644.1| flagellar L-ring protein FlgH [Desulfovibrio sp. 3_1_syn3]
Length = 239
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 23/249 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS-PMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + + + L C + P + P+ + + +
Sbjct: 1 MKTQLIVPVLGLAFLL-CAACGGGAHKRPALQHPVTPPQE----------YRQETSGPNN 49
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS- 117
SL+ S LF DSRA VGDI+ V + + +A +T +++ S +++ F
Sbjct: 50 PGSLFAASEEDTLFADSRARRVGDIVVVKLVENTKAQNKAETTANKDGSNDYQVAAMFGK 109
Query: 118 ---------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
G Q LN S G R + +AA V +L G L
Sbjct: 110 SKTGFVPLVGIGPQARVGTPVLNTSSVSDLSATGKTKRENYVTTSMAARVLRVLPGGLLQ 169
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G++E+RVN+E + V G++R +DVDA NSV +IA+A I Y G+G + +P
Sbjct: 170 IEGAREIRVNEETEYMVVRGMIRAKDVDAENSVYSTQIADASIEYYGRGVLADKQKPGWF 229
Query: 229 HQLIENLSP 237
+L++N+ P
Sbjct: 230 TRLMDNIWP 238
>gi|319898641|ref|YP_004158734.1| flagellar L-ring protein precursor (Basal body L-ring protein)
[Bartonella clarridgeiae 73]
gi|319402605|emb|CBI76150.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Bartonella clarridgeiae 73]
Length = 210
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 131/216 (60%), Gaps = 7/216 (3%)
Query: 22 ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVG 81
+ + P SP+ ++L + S+S SL+R S + ++D RA+ G
Sbjct: 1 MKDFNSAPNFSPVRANLGYASGNAVSVYPPAPSESQY---SLYRSSANSFYRDPRAMKPG 57
Query: 82 DILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK 141
D+LTV I I+D+A F+N++ R++ + G+S + G++ + S G
Sbjct: 58 DVLTVQIFINDRASFNNKSDLKRDSGSKYTIGAGYSFM----NKFAGSIEGESSSQSKGD 113
Query: 142 GSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSV 201
I R E + L IAAIVT +L NGNL+I+GSQEVRVN+E+R LN+ G+VRP+D+ +N +
Sbjct: 114 AKIERQENIRLSIAAIVTDVLPNGNLVINGSQEVRVNNELRVLNIAGLVRPRDISGNNMI 173
Query: 202 SYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
YDKIAEARISYGG+GR +E+ +PP G QL+ ++P
Sbjct: 174 DYDKIAEARISYGGRGRMSEIQQPPYGQQLLNQIAP 209
>gi|310816833|ref|YP_003964797.1| flagellar L-ring protein FlgH [Ketogulonicigenium vulgare Y25]
gi|308755568|gb|ADO43497.1| flagellar L-ring protein FlgH [Ketogulonicigenium vulgare Y25]
Length = 240
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 122/243 (50%), Gaps = 10/243 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S ++ C + L C + PQ++P S + +
Sbjct: 1 MLRPSLLLACAMT-LSACGGGTPLVGQ-PQLTPSLMSDEHLAMVSSDMPMSL--GPLNTG 56
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF- 119
SLW + +L D RA+ GDILTV I I+D+A F N +G+SR S + L
Sbjct: 57 ASLWSGTRNSLLGDRRAMQRGDILTVVISINDRAEFSNSSGQSRTASQDMSVGALLGLPE 116
Query: 120 -----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+N + D +G GS+SR E+L L +AA V L NG L I GSQE
Sbjct: 117 RAAEVLHGGATLNPGIQLDSSSNFNGTGSVSRNERLTLRVAATVIGTLPNGALEIIGSQE 176
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN+EIR L VTG VR D++ N VSYD+IA ARISYGG+G + P G Q+I+
Sbjct: 177 IRVNNEIRELTVTGFVRTADINRQNEVSYDRIASARISYGGRGPISVAQSPRYGQQIIDR 236
Query: 235 LSP 237
++P
Sbjct: 237 IAP 239
>gi|329888228|ref|ZP_08266826.1| flagellar L-ring family protein [Brevundimonas diminuta ATCC 11568]
gi|328846784|gb|EGF96346.1| flagellar L-ring family protein [Brevundimonas diminuta ATCC 11568]
Length = 240
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 122/220 (55%), Gaps = 10/220 (4%)
Query: 24 EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDI 83
E P+++P+G + ++ + SLWR + F D RA VGDI
Sbjct: 24 EAVKGPELAPIGYPAALVPVEQAYLPEP----TSASANSLWRTGARSFFGDQRARRVGDI 79
Query: 84 LTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG------GGA 137
LTV I I+D+A N T R+R NS ++ F L G +
Sbjct: 80 LTVAIDINDRAQTQNTTQRNRTNSASGGVTNFFGLENSLGRAFPGGFDPANMIGTEGAVN 139
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
++G GS++R+E++NL +AA+VTA++ NGNL+I G QEVR N E+R L V GIVRP+D+D+
Sbjct: 140 ANGSGSVNRSERVNLTVAAVVTAVMPNGNLVIQGRQEVRTNREVRELTVAGIVRPEDIDS 199
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N++ + +IAEARISYGG+G + + P L+E SP
Sbjct: 200 ANTIRHSQIAEARISYGGRGDISRMQATPAAQSLVERFSP 239
>gi|254463113|ref|ZP_05076529.1| flagellar L-ring protein FlgH [Rhodobacterales bacterium HTCC2083]
gi|206679702|gb|EDZ44189.1| flagellar L-ring protein FlgH [Rhodobacteraceae bacterium HTCC2083]
Length = 202
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
+ S SLWR +L D RAL GDI+TV I IDD+A N T R
Sbjct: 1 MIYQGLPQSVERGSVVDGSSLWRRDRMSLLGDRRALQQGDIMTVVIEIDDKAEISNTTSR 60
Query: 103 SRNNSLHRKLSGGFSLFGQQTPQMNGN------LNYDGGGASSGKGSISRAEKLNLLIAA 156
SR+ S + + + Q ++ + +S G GS+ R EKL L IAA
Sbjct: 61 SRDGSDSMNIPNLVGIPQKLAKQWPDGASPTNAIDLNSNSSSKGDGSVRRKEKLTLRIAA 120
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
+ +L NG L I G+QEVRVN E+R L V G VRP+D+ N ++YDKIA ARISYGG+
Sbjct: 121 TIIQVLPNGVLAIEGTQEVRVNFELRELLVNGYVRPEDISRQNEITYDKIASARISYGGR 180
Query: 217 GRTTELLRPPIGHQLIENLSP 237
G+ +++ +P G Q++E + P
Sbjct: 181 GQISDVQQPRYGRQVLEAILP 201
>gi|146281774|ref|YP_001171927.1| flagellar basal body L-ring protein [Pseudomonas stutzeri A1501]
gi|166214825|sp|A4VJD4|FLGH_PSEU5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|145569979|gb|ABP79085.1| flagellar L-ring protein precursor FlgH [Pseudomonas stutzeri
A1501]
Length = 231
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 23/245 (9%)
Query: 1 MYRYSFIV-LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R +V L + L GC + + P +P+ + +
Sbjct: 1 MSRLLIVVSLSSAFALAGCVA-PAPKPNDPYYAPVLP--------------RTPLPAAQN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S ++++ L+ D +A VGDI+T+ + QA + + S+++S + L F
Sbjct: 46 SGAIYQAGFETYLYDDRKAYRVGDIITITLAERTQASKNASSSISKDSSANIGLGSLFGG 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
M+ YD +SG G ++ L+ I V+ +L NG L + G +
Sbjct: 106 AVSMANPLTGNSMSLGAEYDASRDTSGSGQAGQSNSLSGSITVTVSEVLPNGILAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P +
Sbjct: 166 WMTLNTGDELVRIAGLVRQDDIATDNTVSSTRIADARITYSGTGAFADASQPGWLDRFFM 225
Query: 234 N-LSP 237
+ L P
Sbjct: 226 SPLWP 230
>gi|254496890|ref|ZP_05109738.1| flagelle L-ring protein [Legionella drancourtii LLAP12]
gi|254353909|gb|EET12596.1| flagelle L-ring protein [Legionella drancourtii LLAP12]
Length = 224
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 19/234 (8%)
Query: 1 MYRYSFIVLCYSSL-LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M ++F+V+ +S L L GC + + G + P ++
Sbjct: 1 MRLFNFLVVGFSVLVLGGCDAINPPVQG-----------KNPDYAPTYPAAPDPKQLRRE 49
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S +++ A LF+ +RA + GDILTV + + A + + +N+S S F
Sbjct: 50 SGAIYHPETALPLFETARARHEGDILTVYLLENTNASKNATLQQMKNDSNVMTNSATFG- 108
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ N+N + +G + +L I+ V +L NGNL++ G + V++N
Sbjct: 109 -----DTYSMNINLNNQRQFNGSAQAVQNNQLAGSISVTVAKVLSNGNLVVQGEKWVKIN 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ ++GIVRPQD+ A NS + D++A ARISYGG G+ + +
Sbjct: 164 QGEEYVRLSGIVRPQDIKADNSTTSDRVANARISYGGTGQVNNTNAQGWLARFM 217
>gi|257095356|ref|YP_003168997.1| flagellar L-ring protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047880|gb|ACV37068.1| flagellar L-ring protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 229
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRID 91
P + P + + S + S+++ LF+D RA VGD +TV I +
Sbjct: 26 PPTNVHQPMTARPQYRPE-TLAASLAATGSIYQAGASRTLFEDRRARYVGDTITVTITEN 84
Query: 92 DQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
A + T S+ S+ G+ G L + +SGKG +
Sbjct: 85 TSAATKSNTAVSKTGSISAAAGPIVGFPGKSFQG--GELKANSSNVASGKGDAAANNVFT 142
Query: 152 LLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARI 211
I V +L NGNL++SG ++V + + ++G+V P V+A N+V+ +IA+ARI
Sbjct: 143 GTITVTVIEVLPNGNLLVSGEKQVAIGHGQEYIRLSGVVNPYFVNAANTVASSQIADARI 202
Query: 212 SYGGKGRTTELLRPPIGHQLIENLSP 237
Y G +E + P
Sbjct: 203 EYKESGTISEAQVMGWLARFFLTFLP 228
>gi|293395586|ref|ZP_06639869.1| flagellar L-ring protein FlgH [Serratia odorifera DSM 4582]
gi|291421905|gb|EFE95151.1| flagellar L-ring protein FlgH [Serratia odorifera DSM 4582]
Length = 219
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 12/229 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ GC P +D + P + S +S +
Sbjct: 1 MLMLTIGGCA-----------YIPHKPLVDGSTSAQPAPASAPMPNGSIFQSVQPMNYGY 49
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R N+GD LT+ ++ + A + SRN S ++
Sbjct: 50 QPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRNGSSKFGVATAPRYLDGLFGNARA 109
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
++ G GKG + N I V +L NGNL + G +++ +N + +G
Sbjct: 110 DMEMSGDNTFGGKGGANANNTFNGTITVTVNQVLANGNLHVVGEKQIAINQGTEFIRFSG 169
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+V P+ + +NSV+ ++A+ARI Y G G E + NLSP
Sbjct: 170 VVNPRTISGNNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNLSP 218
>gi|49205095|dbj|BAC75959.2| flagellar L-ring protein FlgH [Pseudomonas syringae pv. tabaci]
Length = 222
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 23/233 (9%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAA 70
+LL GC + ++ P +P+ + + ++++
Sbjct: 4 ITLLSGCVAPTAK-PNDPYYAPVLP--------------RTPMSAAANNGAIYQAGFEQN 48
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ-----QTPQ 125
L+ D +A +GDI+T+ + A + +++++ L+ F
Sbjct: 49 LYGDRKAFRIGDIITITLSERMAASKAATSAMTKDSTNSIGLTSLFGSGLTTNNPIGGND 108
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
++ N Y+G + G G +++ L + V +L NG L + G + + +N +
Sbjct: 109 LSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGILAVRGEKWMTLNTGDELVR 168
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ G+VR D+ N+VS +IA+ARI+Y G G + +P + LSPL
Sbjct: 169 IAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFF--LSPL 219
>gi|163750567|ref|ZP_02157805.1| flagellar L-ring protein FlgH [Shewanella benthica KT99]
gi|161329722|gb|EDQ00711.1| flagellar L-ring protein FlgH [Shewanella benthica KT99]
Length = 228
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 19/225 (8%)
Query: 17 GCHSS--ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFK 73
GC S+ I P SP+ + S+++DS A+ L+
Sbjct: 18 GCTSTSGQKPIPDDPYYSPVYPE--------------APPTKIAATGSMYQDSQASSLYS 63
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYD 133
D +AL VGDI+TV + QA + +L +L Y
Sbjct: 64 DIKALKVGDIITVILMEATQAKKSASNEIKKGTNLTLD-PIYAGGGNITIGGQALDLRYK 122
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
+ + ++ L I+A V +L NGNL+I G + + +N+ + +TG+VR Q
Sbjct: 123 DSMNTKRESDADQSNSLTGSISANVMQVLNNGNLVIRGEKWISINNGNEFIRITGVVRSQ 182
Query: 194 DVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
D+ N++ ++A ARI Y G G ++ + + P
Sbjct: 183 DIRPDNTIDSTRVANARIQYSGTGTFADVQQVGWLSSFFMSGWWP 227
>gi|82544455|ref|YP_408402.1| flagellar basal body L-ring protein [Shigella boydii Sb227]
gi|110816541|sp|Q31ZD4|FLGH_SHIBS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|81245866|gb|ABB66574.1| basal-body outer-membrane L (lipopolysaccharide layer) ring protein
[Shigella boydii Sb227]
gi|332094025|gb|EGI99077.1| flagellar L-ring family protein [Shigella boydii 3594-74]
Length = 232
Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 10/232 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 11 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 60
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 61 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 120
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
++ GG +GKG + + + + V +L NGNL + G +++ +N +
Sbjct: 121 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF 180
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + N+V ++ +ARI Y G G E NLSP+
Sbjct: 181 SGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQNMGWLQHFFLNLSPM 232
>gi|315638552|ref|ZP_07893728.1| flagellar L-ring protein FlgH [Campylobacter upsaliensis JV21]
gi|315481396|gb|EFU72024.1| flagellar L-ring protein FlgH [Campylobacter upsaliensis JV21]
Length = 232
Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +L ++ GC + + P++S + E ++ +
Sbjct: 1 MKKVFVYMLPFAFF--GCSAVVD-----PEISMKPPTYVEE------LAPKQSHNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVIIQESTTQSTQANKTTSRTNNANLGGGALVGSTG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G G+ SR E N I+ V IL NGN I GS+
Sbjct: 108 AVNQVLNKVNSYSNIGFQTNSTNNYTGTGTQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G + IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKFIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AVWP 231
>gi|149188069|ref|ZP_01866364.1| flagellar L-ring protein precursor H [Vibrio shilonii AK1]
gi|148838057|gb|EDL54999.1| flagellar L-ring protein precursor H [Vibrio shilonii AK1]
Length = 257
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 94/259 (36%), Gaps = 29/259 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCH---------------SSISEITGIPQMSP---------MGS 36
M + + + ++L GC +++ + G S
Sbjct: 1 MKK--LLCVSLLAVLSGCAQFGQEESVDDVSNSTTTVDAVEGDKTQSSGIVDTLRGRTDP 58
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
D+ P K + SL+ + + DS+ +GDI+TV++ +A
Sbjct: 59 VADDPAWAPIH-PKNKPEHYAAATGSLFNTHYARDWYDDSKPRGIGDIITVELNEATKAA 117
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S+ N + + G S +++ L+ I
Sbjct: 118 KSADADLSKANDSSMD-PLFVGGRPVTVNDYDFSYELKNDNNFKGNASANQSNSLSGSIT 176
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL+I G + + +N + ++G +RP D++ N+++ ++I+ ARI Y G
Sbjct: 177 VEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIEFDNTIASNRISNARIQYSG 236
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 237 TGTQQDMQEPGFLARFFNV 255
>gi|222823644|ref|YP_002575218.1| flagellar L-ring protein FlgH [Campylobacter lari RM2100]
gi|222538866|gb|ACM63967.1| flagellar L-ring protein FlgH [Campylobacter lari RM2100]
Length = 233
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 17/243 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++FGC +++ P ++ + E +N+++
Sbjct: 1 MKFKNVNFYLLPFVMFGCSATVD-----PHINMKPPAYVEE------LAPKQNNNTQSNP 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV IR + S+NN+++ + G
Sbjct: 50 GSLFGKGDNPLFSDKKAMNVNDLVTVVIRENATQNSQGSKATSKNNNVNLGGGQVTTGAG 109
Query: 121 QQTPQM------NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ N G GS +R+E I+A V +L NGN I GS+E
Sbjct: 110 LSKARDFINDYTNIGYTTASTSQYQGTGSQTRSENFQTTISARVIKVLSNGNYFIEGSRE 169
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N E + + ++G++RP D+ N + IA+A+I Y +G + R P G + +E
Sbjct: 170 LLINGEKQIIQLSGVIRPYDISQDNMIDSKYIADAKILYKTEGDIDKSTRKPWGTKFMET 229
Query: 235 LSP 237
+ P
Sbjct: 230 IWP 232
>gi|220903673|ref|YP_002478985.1| flagellar basal body L-ring protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867972|gb|ACL48307.1| flagellar L-ring protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 239
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQA 94
+L + P N SL+ S LF DSRA VGDI+ V + + +A
Sbjct: 28 PALQQPVVDPQEYRQEANGPD--NPGSLFAASEQDTLFSDSRARRVGDIVVVKLVENTKA 85
Query: 95 VFDNQTGRSRNNSLHRKLSGGFS----------LFGQQTPQMNGNLNYDGGGASSGKGSI 144
+T ++ + ++ G L SG G
Sbjct: 86 QNKAETTANKKGANDYQVGALMGQGSHGFIPFLGLGPTNRVGTPALTTSSTSDLSGTGKT 145
Query: 145 SRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYD 204
R + +AA V +L G L I G++E+RVN+E + V G+VR +DV A NSV
Sbjct: 146 KRENYVTTSLAARVIRVLPGGLLQIEGAREIRVNEETEYMVVRGMVRAKDVSADNSVLST 205
Query: 205 KIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+IA+A I Y G+G + +P +L++N+ P
Sbjct: 206 QIADASIEYYGRGVLADKQKPGWFTRLMDNIWP 238
>gi|110816539|sp|Q46PF8|FLGH_RALEJ RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 229
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 20/238 (8%)
Query: 3 RYSFIVLCYSSLLFG-CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + + + L G C + P + + +
Sbjct: 8 RVLYCLAGLALLASGGCA-----------LMPREPLVQLPTTARAEPRPMGPA-----TG 51
Query: 62 SLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ S+A LF+D R NVGDILT+ I + A ++ T SR S
Sbjct: 52 SIFASSYAGNPLFEDRRPRNVGDILTIVITENVNATKNSGTNASRTGSTSMAFDAVPKAL 111
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ N + +G A G S A N I V +L NGNL++SG +++ +N
Sbjct: 112 AGLFSS-SSNASINGANALKASGGASAANTFNGTITVTVLEVLANGNLVVSGEKQLAINQ 170
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N V ++A+ARI Y KG E + N+SP
Sbjct: 171 GAEFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVSP 228
>gi|331007442|ref|ZP_08330619.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC1989]
gi|330418749|gb|EGG93238.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC1989]
Length = 236
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 24/242 (9%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
FI++ L C + S++ ++ + + SL+
Sbjct: 9 FFIIIVSVLPLAAC---------------IPSAIKPDDPKYAPVLPEPKPVPKPTNGSLF 53
Query: 65 RD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
++ +LF ++ +GDI+T+ + + + G + + + G ++ G+
Sbjct: 54 QEYQGMSLFGNTNNHRIGDIITITLDEETISSKSTGVGIDKTSDVSLLEGGNSTILGRDN 113
Query: 124 -------PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+ L+ + SG S ++ L I+ V IL NGNLI+ G + +
Sbjct: 114 TKNIPIVGDVTIPLSSSQDRSFSGDASADQSNSLQGNISVTVVDILANGNLIVRGEKWMT 173
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-L 235
+N + V+G++R +DV N VS K+A ARISY G G + + + + +
Sbjct: 174 LNRGEEYIRVSGMLRKEDVSLDNVVSSTKLANARISYSGTGDLADSQKMGWLGRFFNSVI 233
Query: 236 SP 237
P
Sbjct: 234 WP 235
>gi|149911699|ref|ZP_01900307.1| Flagellar basal body L-ring protein [Moritella sp. PE36]
gi|149805229|gb|EDM65246.1| Flagellar basal body L-ring protein [Moritella sp. PE36]
Length = 251
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 21/254 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS---------------EITGIPQMSPMGSSLDENNRMP 45
M + F + + L GC S + E P D + P
Sbjct: 1 MRNFIFALFVFMQ-LVGCASLVKVKENVVAKNEDATKTEDAKEPADVAETPQQDSPDYAP 59
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ N K + SL+ + +F D +A VGDI+TV + A + +
Sbjct: 60 I--VPDNNPVQAKVTGSLFNPQYNNNIFSDIKARRVGDIITVMLTESTSAKKQASSNLGK 117
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+NS + + + SG GS ++ L I+ V +L N
Sbjct: 118 DNSFELD-PVNLGGEDVVIGGYTIEGSLNQKSSFSGNGSADQSNSLKGNISVTVVRVLPN 176
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
NL+I G + + +N+ + +TG++RPQDVDA N V IA ARI YG E
Sbjct: 177 NNLVIRGEKWLMLNNGSEYIRLTGLLRPQDVDADNKVDSSLIANARIQYGAVDDLGEAQV 236
Query: 225 PPIGHQLIENL-SP 237
+ + + P
Sbjct: 237 QGWATKFLNSSKWP 250
>gi|291334317|gb|ADD93978.1| flagellar L ring protein FlgH [uncultured marine bacterium
MedDCM-OCT-S09-C247]
Length = 225
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
MY+Y + LL C + + + + + P + + D +
Sbjct: 1 MYKY---LAPLIFLLAACDTYVEDKRSV-------------DFEPIYLPETEQEDESSDL 44
Query: 61 YSLWRDSHAALFK-DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ + +LF ++RA +GDILTV QA +R++ L
Sbjct: 45 GTIYQQNKGSLFAMEARAHRIGDILTVSFTESFQATKSQNAASTRSSENSLTLPTVMKKL 104
Query: 120 GQQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ G L G SG GS +++ L LI+ V + NGNL I G +++ +
Sbjct: 105 PVIGKGIPEAGELASSGESKFSGSGSSNQSNSLTGLISVHVVRVFTNGNLEILGQKKLTL 164
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N+ + V+GIVRP+D+ + N V D+IA A I+Y G G T R +++E ++P
Sbjct: 165 NNGDEYIRVSGIVRPRDISSDNIVQSDRIANADINYIGAGDTARSGRKGWYTKMLETITP 224
Query: 238 L 238
L
Sbjct: 225 L 225
>gi|57242591|ref|ZP_00370528.1| flagellar L-ring protein FlgH [Campylobacter upsaliensis RM3195]
gi|57016520|gb|EAL53304.1| flagellar L-ring protein FlgH [Campylobacter upsaliensis RM3195]
Length = 232
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +L ++ GC + + P++S + E ++ +
Sbjct: 1 MKKVFVYMLPFAFF--GCSAVVD-----PEISMKPPTYVEE------LAPKQSHNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D +A+NV D++TV I+ SR N+ + G
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVIIQESTTQSTQANKTTSRTNNANLGGGALVGSTG 107
Query: 121 QQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+N + +G G+ SR E N I+ V IL NGN I GS+
Sbjct: 108 AVNQVLNRVNSYSNIGFQTNSTNNYTGTGTQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G + IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKFIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AVWP 231
>gi|293408370|ref|ZP_06652209.1| flagellar L-ring protein FlgH [Escherichia coli B354]
gi|291471548|gb|EFF14031.1| flagellar L-ring protein FlgH [Escherichia coli B354]
Length = 221
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 92/239 (38%), Gaps = 20/239 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ LL GC S + + ++
Sbjct: 1 MKNYLWLVALFPLLSGCESQAILVKKDDAYF-------------APPTTEAPPPADGRAG 47
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
++ + +L D RA VGDILTV + Q+ +T ++N++ F
Sbjct: 48 GVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGKSNTVDIGAPTIFG--- 104
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + + D G + + L I V A+ NG L I G + + +N
Sbjct: 105 --HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPNGILEIRGEKWLTLNQG 162
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
+ ++G+VR D+ NSVS +IA+ARISY G+G ++ +L + L P+
Sbjct: 163 DEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFPI 221
>gi|114307378|gb|ABI58621.1| flagellar L-ring protein [Nitrosomonas eutropha C91]
Length = 212
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 10/212 (4%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--------HAALFKDSRALNVGDILT 85
+ + M + ++ + +++ + + LF+D RA +GD +
Sbjct: 2 ITPAPKVQQPMTIRPPEPLIIPVSQSNGGIYQAAFNYQGSGRYTPLFEDRRARGIGDTII 61
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
V + A + + R+ + + L + Q + +L GKG S
Sbjct: 62 VMLNEKTNASKKSGSNAQRDGGIDLSVPSFLGLPFKSIFQ-DLDLEAKSSNKFDGKGESS 120
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDK 205
I V IL NGNL++SG +++ +N + ++G++ P +V +N+VS +
Sbjct: 121 SNNNFTGTITVTVIDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINVM-NNTVSSVQ 179
Query: 206 IAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+A+ARI Y G G E + ++SP
Sbjct: 180 VADARIEYRGTGYLDEAQTMGWLSRFFLSISP 211
>gi|268679671|ref|YP_003304102.1| flagellar L-ring protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617702|gb|ACZ12067.1| flagellar L-ring protein [Sulfurospirillum deleyianum DSM 6946]
Length = 237
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R L + ++ GC + + P++S + N +
Sbjct: 1 MRVFTCSLVTAFIVLGCSNHPA----SPEISMKPPVYVDE------IPSRVNENIASNPG 50
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ LF D +A++V DI+T+ I + S+ +S +
Sbjct: 51 SLFGQGDNPLFADLKAMHVNDIVTITITEQTVQTSSGKKALSKESSSDLNAGVIAGVPFG 110
Query: 122 Q----------TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
T N N + +G GS SR E I+A + +L NGN I G
Sbjct: 111 GVVGNVADKIATKSANLGFNAGSTNSFTGTGSTSRNESFTTTISARIIKVLNNGNYFIEG 170
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
S+E+ +N E + + V+G++RP D+D +N++ IA+A+I Y +G + P G +
Sbjct: 171 SRELLINGEKQLIQVSGVIRPYDIDQYNNIDSKYIADAKILYKTEGDIDQTTTKPWGSKF 230
Query: 232 IENLSP 237
+E + P
Sbjct: 231 METIWP 236
>gi|73539453|ref|YP_299820.1| flagellar basal body L-ring protein [Ralstonia eutropha JMP134]
gi|72122790|gb|AAZ64976.1| Flagellar L-ring protein [Ralstonia eutropha JMP134]
Length = 232
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 20/238 (8%)
Query: 3 RYSFIVLCYSSLLFG-CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + + + L G C + P + + +
Sbjct: 11 RVLYCLAGLALLASGGCA-----------LMPREPLVQLPTTARAEPRPMGPA-----TG 54
Query: 62 SLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ S+A LF+D R NVGDILT+ I + A ++ T SR S
Sbjct: 55 SIFASSYAGNPLFEDRRPRNVGDILTIVITENVNATKNSGTNASRTGSTSMAFDAVPKAL 114
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ N + +G A G S A N I V +L NGNL++SG +++ +N
Sbjct: 115 AGLFSS-SSNASINGANALKASGGASAANTFNGTITVTVLEVLANGNLVVSGEKQLAINQ 173
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N V ++A+ARI Y KG E + N+SP
Sbjct: 174 GAEFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVSP 231
>gi|239817162|ref|YP_002946072.1| flagellar L-ring protein [Variovorax paradoxus S110]
gi|239803739|gb|ACS20806.1| flagellar L-ring protein [Variovorax paradoxus S110]
Length = 227
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 18/231 (7%)
Query: 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS- 67
+ + L GC E M+ D S + + ++++D
Sbjct: 12 VAVTVLASGCAQVPREPLVHQPMT--------------ARADNMASMPRRANGAIFQDGP 57
Query: 68 -HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ALF+D R NVGDILT+ I A ++ SR SL +G L G
Sbjct: 58 GGSALFEDRRPRNVGDILTIVISERVNASKNSGASASRTGSLAADFAGIPKLLGSLLDGQ 117
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
+ L+ + G + N +I V ++ NGNL++SG +++ +N +
Sbjct: 118 DAKLSGGNKLDAKGGANA--NNTFNGVITVTVVDVMRNGNLLVSGEKQMGINQGTEYIRF 175
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ V +N+V +A+ARI Y KG E + N+ P
Sbjct: 176 SGVVNPRTVSGNNTVPSTLVADARIEYTAKGYIDEAQHMGWMQRFFLNVMP 226
>gi|238782795|ref|ZP_04626824.1| Flagellar L-ring protein [Yersinia bercovieri ATCC 43970]
gi|238716218|gb|EEQ08201.1| Flagellar L-ring protein [Yersinia bercovieri ATCC 43970]
Length = 260
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + L GC I P + + P + S ++
Sbjct: 37 FLSPIVLTLFLTGCS----YIPHQPLVGGV------TTASPASPTMTTVNGSIFQTGQAM 86
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ +F+D R NVGD LT+ ++ + A + +R S + ++
Sbjct: 87 SYGYQPMFEDRRPRNVGDTLTIVLQENVSASKSSSASANRGGSTGISVDAVPNMLSGLLG 146
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
N G SGKG + + I V +LENGNL + G +++ +N +
Sbjct: 147 GDRANTAISGSSDFSGKGGAAARNTFSGTITVTVQQLLENGNLRVVGEKQIAINQGTEFI 206
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+G+V P+ + + N+V ++++ARI Y G G E + +L N+SP+
Sbjct: 207 RFSGVVNPRTISSSNTVISTQVSDARIEYVGNGYINEAQQMGWLQRLFLNISPI 260
>gi|188592120|ref|YP_001796718.1| flagellar basal body l-ring protein [Cupriavidus taiwanensis LMG
19424]
gi|226701916|sp|B2AI82|FLGH_CUPTR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|170938494|emb|CAP63481.1| FlgH: Flagellar L-ring protein ; signal peptide [Cupriavidus
taiwanensis LMG 19424]
Length = 229
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 19/233 (8%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ GC + P + + S S+++
Sbjct: 13 LAGVAMLAASGCA-----------LMPREPLVQMPTTARAEPRPIGPA-----SGSIFQS 56
Query: 67 SHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
S+A LF+D R NVGDILT+ I + A ++ T SR + G
Sbjct: 57 SYAGNPLFEDRRPRNVGDILTILITENVNASKNSGTNTSRTGNAALAFDSVPRALGGLFG 116
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ N N +G G S A N I V +L NGNL++SG +++ +N +
Sbjct: 117 T-SQNANINGANTMKASGGASAANTFNGTITVTVLEVLANGNLVVSGEKQMAINQGAEFI 175
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P+ + N+V ++A+ARI Y KG E + N+SP
Sbjct: 176 RFSGVVNPRTITGDNAVLSTQVADARIEYTAKGVIDEAQNMGWLQRFFLNVSP 228
>gi|254516992|ref|ZP_05129050.1| flagellar L-ring protein FlgH [gamma proteobacterium NOR5-3]
gi|219674497|gb|EED30865.1| flagellar L-ring protein FlgH [gamma proteobacterium NOR5-3]
Length = 231
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQA 94
S + P + S + + SL+ + LF+D RA +GDI++V + A
Sbjct: 27 SPPEYVKIEPIEYPEVTVS-TAPITGSLYASNRSMFLFEDVRAHEIGDIVSVVLVESTSA 85
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQ-QTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
T S++ S+ + + A +GS +++ +LN
Sbjct: 86 TKSADTDVSKDGSVSIVEPTILGAPVTINNGRYSLGTELSSSSAFESEGSSNQSNRLNGS 145
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
IA V+ +L NGNL I G + +++N + + GIVRP+D+ N++ +A+ARISY
Sbjct: 146 IAVQVSKVLPNGNLEIQGEKWIKINQGDEYIRLRGIVRPEDLSPTNTIPSTLVADARISY 205
Query: 214 GGKGRTTELLRPPIGHQLIENLSPL 238
GG G E P + SPL
Sbjct: 206 GGTGILNESNTPGWLTRFFM--SPL 228
>gi|254508442|ref|ZP_05120562.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus 16]
gi|219548652|gb|EED25657.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus 16]
Length = 260
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRAL 78
+ G P +P+ + ++ SL+ + ++L+ DS+
Sbjct: 56 GRNDPVAGDPAWAPIHPKHKREHYA-------------AETGSLFNSASTSSLYDDSKPR 102
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
VGDI+TV + +A S+ N + + N + + +
Sbjct: 103 GVGDIITVTLDEKTKAAKSANADMSKKNDSSMEPLFVGGQELKVGGDYNFSYDLNNTNTF 162
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G S +++ L+ I V +L NGNL+I G + + +N + ++G +RP D+
Sbjct: 163 AGDASANQSNSLSGSITVEVIEVLGNGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFD 222
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N+++ ++++ ARI Y G G ++ P +
Sbjct: 223 NTIASNRVSNARIQYSGTGTQQDMQEPGFLARFFNV 258
>gi|158422254|ref|YP_001523546.1| flagellar L-ring protein precursor [Azorhizobium caulinodans ORS
571]
gi|189044478|sp|A8IPJ4|FLGH_AZOC5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|158329143|dbj|BAF86628.1| flagellar L-ring protein precursor [Azorhizobium caulinodans ORS
571]
Length = 239
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 136/226 (60%), Gaps = 8/226 (3%)
Query: 18 CHSSI-SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
C ++ + P ++P+G L E RMP + + T + S + + ++++ R
Sbjct: 17 CQTNSYDSLAYGPTLTPVGQGL-EAGRMPVPQPFQQAKERTFR--SAYNLNSQSMYRALR 73
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG----QQTPQMNGNLNY 132
A VGD++ + I IDD+A DN T RSR ++ + +L G + +GNL
Sbjct: 74 AAAVGDVIRITIDIDDKAQLDNNTNRSRKSASDVGFASALNLSGFQSGSTSGSASGNLGL 133
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
G ++ GKG I R+EKL L +AA+VT ++ NGNL+I+GSQE+ VN E+R L + GIV P
Sbjct: 134 TGDTSTDGKGKIDRSEKLRLSLAAVVTEVMPNGNLVINGSQEILVNYEVRVLTLGGIVNP 193
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
DV ++N+V+YDK+AEARISY G+GR ++ +P G +L + ++P+
Sbjct: 194 LDVTSNNTVAYDKVAEARISYAGRGRLNDVQQPAWGQRLFDAVNPM 239
>gi|300114796|ref|YP_003761371.1| flagellar l-ring protein [Nitrosococcus watsonii C-113]
gi|299540733|gb|ADJ29050.1| flagellar L-ring protein [Nitrosococcus watsonii C-113]
Length = 234
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 28/249 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R ++ L+ GC + + P + + +
Sbjct: 1 MNRKKAMLAMAGMLITGCAAQLPP--PDPSFAATRPVV--------------APPPQPSN 44
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS-- 117
+++ + +LF D RA VGD+LT+ + + T RN S
Sbjct: 45 GAIYHPGYEISLFTDFRAQRVGDVLTIVLEERTTGEKGSDTAIDRNTSYSLTNPTLLGSG 104
Query: 118 --------LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + + GA SG G S+ +L+ I V +L NGNL++
Sbjct: 105 VQFNTPNWVPLASNQNNSLEMAVKSKGAFSGSGDSSQNNRLSGHITVTVAEVLPNGNLVV 164
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G + + +N + ++GIV + ++ N+VS +A+ARI+Y G G T E R
Sbjct: 165 RGEKVITINHGNEYIKISGIVNRRYINPDNTVSSLNLADARIAYVGDGATQEANRMGWLS 224
Query: 230 QLIEN-LSP 237
+ + P
Sbjct: 225 RFFFSRFMP 233
>gi|304321135|ref|YP_003854778.1| flagellar L-ring protein precursor [Parvularcula bermudensis
HTCC2503]
gi|303300037|gb|ADM09636.1| flagellar L-ring protein precursor [Parvularcula bermudensis
HTCC2503]
Length = 231
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/243 (30%), Positives = 124/243 (51%), Gaps = 19/243 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R SF + + + C ++ ++ +P D P ++
Sbjct: 1 MTRSSFPLFIAALAVSACTTTNDQLPYAEIPTPEPIVADLPALAP-------------RN 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SLW +LF + RA NVGDILTV + +D+QA N R+R N ++ F +
Sbjct: 48 ASLWNQEPQSLFGNRRARNVGDILTVIVSVDEQAEIQNSLARNRTNQEDFSVNALFGIDQ 107
Query: 121 QQTPQMNGNLNYDGG------GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
Q Q+ G+ + ++G GSI+R E++ L +AA V L NG+L++ GSQ
Sbjct: 108 QFQDQLPGDATFSPAVGVTRQATAAGDGSITRQERITLRLAAQVIEQLPNGHLVVVGSQR 167
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN E+R L + G+VRP+D+ N++++DKIA A I Y G+G+ + P G ++++
Sbjct: 168 IRVNQEVRDLRLQGVVRPEDITRDNTITHDKIAAADIVYTGQGQISRTTNPKPGSRVLDF 227
Query: 235 LSP 237
+ P
Sbjct: 228 IVP 230
>gi|85058014|ref|YP_453716.1| flagellar basal body L-ring protein [Sodalis glossinidius str.
'morsitans']
gi|84778534|dbj|BAE73311.1| flagellar L-ring protein precursor FlgH [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 10/230 (4%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ + LL GC + P P + + S +
Sbjct: 33 IALATLLLGGCAAPP----------PRPLVAGATTAAPAAPMPIAVNGSVFQPGQAMNYG 82
Query: 68 HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
+ LF+D R N+GD LT+ ++ + A + + R + ++ S+
Sbjct: 83 YQPLFEDRRPRNIGDTLTIMLQENVSASKSSSSNADRKGNADLGINALPSMLNGLIGGDR 142
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+ + +GKG + + I V +L NGNL + G +++ +N + +
Sbjct: 143 LATDIESSNGFNGKGGAAAKNTFSGTITVTVIDVLTNGNLRVVGEKQIAINQGTEFIRFS 202
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
GIV P+ +D +N V +++ARI Y G G E + + N P
Sbjct: 203 GIVNPRTIDGNNQVVSTLVSDARIEYVGDGYINEAQQMGWLQRFFLNYFP 252
>gi|300024602|ref|YP_003757213.1| flagellar L-ring protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526423|gb|ADJ24892.1| flagellar L-ring protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 246
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 133/220 (60%), Gaps = 5/220 (2%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNV 80
+ E++ P MSP+GS L K + S WRDS A LF+D+RA
Sbjct: 28 QLKEVSREPVMSPVGSGLLPERLPHVQLPVTK--AAYTSGNSTWRDSGADLFRDARAFKN 85
Query: 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS---GGFSLFGQQTPQMNGNLNYDGGGA 137
GD++TV ++I DQA N R R++S+ S + + N N D +
Sbjct: 86 GDVVTVKVQIKDQATLGNTLNRKRDSSVGLTSSLDYDLGFGGAGGSGSGSLNGNLDRTTS 145
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ KG I+R+E +NLL+AA+V+ +L NGNL+ISG+QEVRVN E+R L+V GI+RP+D+
Sbjct: 146 TDSKGGITRSENINLLVAAVVSEVLPNGNLVISGTQEVRVNFEVRVLSVAGIIRPRDIST 205
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N +SYDKIAEAR+SYGG+GR E+ +P G Q+++ ++P
Sbjct: 206 DNQISYDKIAEARVSYGGRGRVMEVQQPAYGQQILDIIAP 245
>gi|157165376|ref|YP_001466900.1| flagellar basal body L-ring protein [Campylobacter concisus 13826]
gi|112800285|gb|EAT97629.1| flagellar L-ring protein FlgH [Campylobacter concisus 13826]
Length = 235
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 18/243 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
Y+ ++V GC + P ++ E + +
Sbjct: 3 YKKIWLVTFAGIFYTGCT-----PSADPHINMKPPVYVEQ------LPSKDSGSGQSNAG 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH-------RKLSG 114
SL+ LF D +A+NV DI+T+ I + + ++++++ +
Sbjct: 52 SLFGKGDNPLFSDRKAMNVNDIVTIVISENASQISSGSKSTNKDSTISLGGGVFTAGAAP 111
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ + GG +G G+ +R+EK I+A + IL NGN I GS+E
Sbjct: 112 LSTVADNLNKYGDIGFKAGGGNKFTGSGTSNRSEKFTATISARIIKILNNGNYFIEGSRE 171
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N E + + V+G++RP D+ +N + IA+A+I Y +G + + P G +L+E
Sbjct: 172 LLINGEKQIMQVSGVIRPYDISQNNEIDSKYIADAKILYKTEGELDKSTKKPWGTRLMEA 231
Query: 235 LSP 237
+ P
Sbjct: 232 IWP 234
>gi|59712478|ref|YP_205254.1| flagellar basal body L-ring protein [Vibrio fischeri ES114]
gi|197334935|ref|YP_002156697.1| flagellar L-ring protein FlgH [Vibrio fischeri MJ11]
gi|75353594|sp|Q5E3N0|FLGH_VIBF1 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|226701937|sp|B5FGS5|FLGH_VIBFM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|59480579|gb|AAW86366.1| flagellar basal body L ring protein FlgH [Vibrio fischeri ES114]
gi|197316425|gb|ACH65872.1| flagellar L-ring protein FlgH [Vibrio fischeri MJ11]
Length = 263
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 14/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSHAALFKDSRAL 78
I G P +P+ + + SL+ D ++ D++
Sbjct: 59 GRNDPIAGDPAWAPIHPKEKPEHYA-------------AATGSLFNVDHAQDMYDDTKPR 105
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + + +A S++N Q Q N +
Sbjct: 106 GLGDIVTVMLAENTKAAKSADAELSKSNDSSMDPLQVGGQELQMGGQYNFSYELSNDNNF 165
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G S +++ L+ I V +L NGNL+I G + + +N + ++G +RP D++
Sbjct: 166 TGNTSANQSNSLSGSITVEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDINFD 225
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N++ +I+ ARI Y G G ++ P +
Sbjct: 226 NTIDSTRISNARIQYSGTGDQQDMQEPGFLARFFNV 261
>gi|293409445|ref|ZP_06653021.1| flagellar L-ring protein FlgH [Escherichia coli B354]
gi|291469913|gb|EFF12397.1| flagellar L-ring protein FlgH [Escherichia coli B354]
Length = 232
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 83/199 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ P G + S +S + LF+D R N+GD LT+ ++ + A +
Sbjct: 34 ATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSS 93
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
SR+ + ++ GG +GKG + + + + V
Sbjct: 94 ANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVD 153
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G
Sbjct: 154 QVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYI 213
Query: 220 TELLRPPIGHQLIENLSPL 238
E + NLSP+
Sbjct: 214 NEAQNMGWLQRFFLNLSPM 232
>gi|34558388|ref|NP_908203.1| flagellar basal body L-ring protein [Wolinella succinogenes DSM
1740]
gi|34484107|emb|CAE11103.1| FLAGELLAR L-RING PROTEIN FLGH [Wolinella succinogenes]
Length = 238
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 24/249 (9%)
Query: 1 MYRYS--FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R S +V ++L GC PQ+S E + +S
Sbjct: 1 MRRMSGFLLVTLVAALYSGCS------VADPQISFKPPEYVEE------MPAREVEESFG 48
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG-FS 117
+ SL+ LF D RA+ + D++TV I A + S +S F
Sbjct: 49 NAGSLFGQGDNPLFADRRAMKLNDLVTVIINETASASSSGKKDLSETSSSTMNGPSVTFG 108
Query: 118 LFGQQTPQMNGNLNY---------DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
Q LN + +G G+ R E ++A + ++ENGN
Sbjct: 109 GPSQSIGNAVNKLNNFTSFGLSTGNNNSTFAGSGTQQRQESFTTTVSARIIKVMENGNYF 168
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G +E+ +N E + + +TG++RP D+ +N+++ IA+A+I Y +G + G
Sbjct: 169 IEGGREILINGEKQIMRLTGVIRPYDIGRNNTINSRYIADAKIMYETQGEIKKSTEKGWG 228
Query: 229 HQLIENLSP 237
+++E++ P
Sbjct: 229 TKVLESVWP 237
>gi|294339840|emb|CAZ88203.1| putative Flagellar L-ring protein precursor (Basal body L-ring
protein) FlgH [Thiomonas sp. 3As]
Length = 237
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ + ++ ++ + ++W+ +LF+DSRA VGD++TV I+ + A T ++
Sbjct: 45 PIPAEPESMNAHTPNGAIWQPGTNVSLFEDSRAHRVGDLITVLIQENANATKSTNTTVNK 104
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
++ + LS F + ++ G G+ S++ + A V ++ N
Sbjct: 105 SDDVSAGLSSFFGKPFTVGG-YSPSMGLTSSTKFGGNGATSQSNTFTTTLQATVVQVMSN 163
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
GN+ ISG +EV +N + V G+VR DV N+V +IA AR+ Y G G +
Sbjct: 164 GNMQISGQKEVMLNGGHEYIRVAGVVRAADVSPQNTVLSTQIANARVEYSGTGDVYAAAK 223
Query: 225 PPIGHQLIENLSP 237
P +L P
Sbjct: 224 VPWLASFFLSLWP 236
>gi|304397207|ref|ZP_07379086.1| flagellar L-ring protein [Pantoea sp. aB]
gi|304355356|gb|EFM19724.1| flagellar L-ring protein [Pantoea sp. aB]
Length = 236
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 24/241 (9%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++V L GC +P+ MP + S+++
Sbjct: 12 WLVASLLLTLNGCALVPR--------TPLVEGATTAQPMPSAPPVV--------NGSIFQ 55
Query: 66 D------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ LF+D R N+GD LT+ ++ + A + SR+ S ++G +
Sbjct: 56 GVAPLNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSASASRDGSNSLGITGVPTGL 115
Query: 120 GQQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
NL+ +G +GKG S I V +L NGNL + G +++ +
Sbjct: 116 AGLVGAGGEKANLSAEGKNDFAGKGGASANNTFTGTITVTVDQVLSNGNLHVVGEKQIAI 175
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + +G+V P+ + A N+V +A+ARI Y G G E + N+SP
Sbjct: 176 NQGTEFIRFSGVVNPRTISASNAVLSTAVADARIEYVGNGYINEAQTMGWFQRFFLNISP 235
Query: 238 L 238
+
Sbjct: 236 M 236
>gi|283953947|ref|ZP_06371476.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
414]
gi|283794552|gb|EFC33292.1| flagellar L-ring protein FlgH [Campylobacter jejuni subsp. jejuni
414]
Length = 232
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVESAP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG------ 114
SL+ LF D +A+NV D++TV I+ SR N+ +
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGTLTGSSG 107
Query: 115 -GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + N + +G GS SR E N I+ V IL NGN I GS+
Sbjct: 108 LVANALNKVNAYSNIGFQTNSTNNYTGTGSQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|331672599|ref|ZP_08373388.1| flagellar L-ring protein FlgH [Escherichia coli TA280]
gi|331070242|gb|EGI41608.1| flagellar L-ring protein FlgH [Escherichia coli TA280]
Length = 235
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 83/199 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ P G + S +S + LF+D R N+GD LT+ ++ + A +
Sbjct: 37 ATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSS 96
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
SR+ + ++ GG +GKG + + + + V
Sbjct: 97 ANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVD 156
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G
Sbjct: 157 QVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYI 216
Query: 220 TELLRPPIGHQLIENLSPL 238
E + NLSP+
Sbjct: 217 NEAQNMGWLQRFFLNLSPM 235
>gi|154174210|ref|YP_001408222.1| flagellar basal body L-ring protein [Campylobacter curvus 525.92]
gi|153793061|gb|EAT99529.2| flagellar L-ring protein FlgH [Campylobacter curvus 525.92]
Length = 235
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 19/245 (7%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M +Y + L GC + P ++ E ++
Sbjct: 1 MKFKYCLSFATATILYTGCT-----PSADPHINMKPPVYVEQ------LPAKESGSGQSN 49
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH-------RKL 112
+ SL+ LF D +A+NV DI+TV I SR+++
Sbjct: 50 AGSLFGRGENPLFSDRKAMNVNDIVTVVISETATQSSTGSKKSSRDSTTSLGGGVFTAGA 109
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ ++ Q + G G G+ SR E+ I+A + IL NGN I GS
Sbjct: 110 APLSTVANQLNKYSDIGFKAGGENKFEGSGTTSRNERFTATISARIIKILNNGNYFIEGS 169
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+E+ VN E + + V+G++RP D+ +N + IA+A+I Y +G + + P G +L+
Sbjct: 170 REILVNGEKQVIQVSGVIRPYDISQNNQIDSKYIADAKILYKTEGDVDKSTKKPWGTRLM 229
Query: 233 ENLSP 237
E + P
Sbjct: 230 EAIWP 234
>gi|209695759|ref|YP_002263689.1| flagellar basal body L-ring protein [Aliivibrio salmonicida
LFI1238]
gi|226701910|sp|B6EJG2|FLGH_ALISL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|208009712|emb|CAQ80016.1| flagellar L-ring protein 1 precursor (basal body L-ring protein 1)
[Aliivibrio salmonicida LFI1238]
Length = 261
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 14/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSHAALFKDSRAL 78
I+G P +P+ + + SL+ D ++ D++
Sbjct: 57 GRSEPISGDPAWAPIHPKEKPEHYA-------------AATGSLFNVDHAQDMYDDTKPR 103
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + + +A S+ N Q Q N +
Sbjct: 104 GLGDIVTVMLAENTKAAKSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSNDNKF 163
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G S +++ L+ I V +L NGNL+I G + + +N + ++G +RP D+
Sbjct: 164 TGNTSANQSNSLSGSITVEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFD 223
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N+++ +I+ ARI Y G G ++ P +
Sbjct: 224 NTIASTRISNARIQYSGTGDQQDMQEPGFLARFFNV 259
>gi|325295401|ref|YP_004281915.1| Flagellar L-ring protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065849|gb|ADY73856.1| Flagellar L-ring protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 233
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 20/237 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
I+ S LF C SS ++ + + L SL
Sbjct: 13 LQVIIAFTSIFLFSCGSSGKKV----------------SVVKPLPPPPVEEAKPTSPGSL 56
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRI--DDQAVFDNQTGRSRNNSLHRKLSGGFSL-FG 120
+ + LF D++A VGDI+TV I +Q+G+ ++ F
Sbjct: 57 FS-GYDNLFADTKARRVGDIVTVKIYEVLTGYGSTQSQSGKKSTFDINVNNPTLFGKKIP 115
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
T N + SG+G+ R KL I+A V + NGNL I G + V++ND+
Sbjct: 116 NGTKDPLLNFSTKPSIDFSGQGTTKRDAKLIATISARVVKVYPNGNLYIVGEKIVKINDD 175
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ L ++GIV+P D+ NSV KIA + Y GKG + +P + + + P
Sbjct: 176 TQILKISGIVKPTDIAPDNSVPSSKIANMYVEYNGKGYIADNQKPGWLARFLIKIWP 232
>gi|238028846|ref|YP_002913077.1| flagellar basal body L-ring protein [Burkholderia glumae BGR1]
gi|237878040|gb|ACR30373.1| Flagellar L-ring protein [Burkholderia glumae BGR1]
Length = 224
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 25 PRQPITQQPMTAVPPVPPSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENVNAT 84
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R ++ K+ L G L+ G + G S A I
Sbjct: 85 KSSGANANRGSATDFKVPTAGFLGGLFGK---AKLSASGDNKFTATGGASAANTFTGTIT 141
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 142 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADARIEYSS 201
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 202 KGYINETETMGWLQRFFLNVAP 223
>gi|146277705|ref|YP_001167864.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555946|gb|ABP70559.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17025]
Length = 222
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ S LF D R
Sbjct: 19 CSTYVEDRASE-------------AWAPVYPVEEPARLDSLPTGGIYSASARGLFVSDRR 65
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+T+D A SR+N L +L +G L+
Sbjct: 66 AARVGDIVTIDFAEKFSASKSQTATGSRSNDYALDLPDALTL-----GLDDGALDNSTSQ 120
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
+ +G+G+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 121 SFAGRGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 180
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N VS D+IA A I Y G G T + +P + + +SPL
Sbjct: 181 PDNVVSSDRIAHAEIKYVGAGDTADTAKPGWLRRGLSVVSPL 222
>gi|327254557|gb|EGE66173.1| flagellar L-ring family protein [Escherichia coli STEC_7v]
Length = 221
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ L+ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGLFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+NS+ F + N + + D G + + L I V A+ N
Sbjct: 92 SNSVDITAPTVFG-----HTKNNLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|332704821|ref|ZP_08424909.1| Flagellar L-ring protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554970|gb|EGJ52014.1| Flagellar L-ring protein [Desulfovibrio africanus str. Walvis Bay]
Length = 235
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 24/243 (9%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ ++ S L C T +P ++ S SL
Sbjct: 7 LAVFLVAASLPLVACAPGKKTPTAMPVLT---------------QPVPPPPVSQNNPGSL 51
Query: 64 WRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ +L F+D RA VGDI+ V I T +++S ++ F
Sbjct: 52 FDAGQNSLLFEDDRARRVGDIVLVRIVETSSGSHTADTTSDKDSSYQAGVTNYFGRSKVG 111
Query: 123 TPQMN--------GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+N + + S G SR L + A V +L +G L + G+++
Sbjct: 112 IAGINFPGTVGTDPMIGTNTTSKFSASGETSRESDLTAAVGARVIRVLPDGLLQVEGARQ 171
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+R+NDE + L V G+VR +D+ NS+S ++A A + Y G+G + RP ++++N
Sbjct: 172 MRINDETQILVVRGLVRSRDIGPDNSISSSQMANAEVEYYGQGVLADKQRPGWIARILDN 231
Query: 235 LSP 237
+ P
Sbjct: 232 IWP 234
>gi|46203816|ref|ZP_00050943.2| COG2063: Flagellar basal body L-ring protein [Magnetospirillum
magnetotacticum MS-1]
Length = 191
Score = 188 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 47 LGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
+ F +S W + AAL++D RA +VGD++TV I I+D+A FDN + R R+
Sbjct: 1 MPTSFGALGPRHSYHSTWSPASAALYQDPRAHDVGDVITVSISINDKAQFDNASDRQRSQ 60
Query: 107 SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
G+ + G + + G + G+GSI R E L+L +AA+VT +L NGN
Sbjct: 61 KSSLGFDFGYGVSGLKD-TATADTGIRSGTETKGQGSIDRKESLSLSVAAVVTEVLPNGN 119
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
++ISGSQEVRVN+E+R L V GIVRP+D+ N++ YDKIAEARISYGG+GR T++ P
Sbjct: 120 VVISGSQEVRVNNEVRVLEVAGIVRPRDISRKNTIDYDKIAEARISYGGRGRLTDVQGPT 179
Query: 227 IGHQLIENLSP 237
+G Q+ E L+P
Sbjct: 180 LGQQVFETLAP 190
>gi|116694222|ref|YP_728433.1| flagellar basal body L-ring protein [Ralstonia eutropha H16]
gi|113528721|emb|CAJ95068.1| flagellar basal body L-ring protein [Ralstonia eutropha H16]
Length = 234
Score = 188 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 21/237 (8%)
Query: 5 SFIVLCYSSLLF--GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ + L ++L GC + P + + S S
Sbjct: 14 ALVCLAGVAMLASGGCA-----------LMPREPLVQLPTTARAEPRPMGPA-----SGS 57
Query: 63 LWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+++ S+A LF+D R NVGDILT+ I + A ++ T SR +
Sbjct: 58 IYQSSYAGNPLFEDRRPRNVGDILTILITENVNASKNSGTNTSRTGNTALAFDAVPRALS 117
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ N + +G G S A N I V +L NGNL++SG +++ +N
Sbjct: 118 GLFNS-SSNASINGANTMKASGGASAANTFNGTITVTVLEVLTNGNLVVSGEKQMAINQG 176
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+V ++A+ARI Y KG E + N+SP
Sbjct: 177 AEFIRFSGVVNPRTITGDNAVLSTQVADARIEYTAKGVIDEAQNMGWLQRFFLNVSP 233
>gi|307546965|ref|YP_003899444.1| flagellar basal body L-ring protein [Halomonas elongata DSM 2581]
gi|307218989|emb|CBV44259.1| flagellar basal body L-ring protein [Halomonas elongata DSM 2581]
Length = 241
Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 5/190 (2%)
Query: 50 DFKNSDSTKKSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
D + + S+++ + LF+D R VGD+LT+ + A + ++ RN S
Sbjct: 54 DIPDRQRPIPNGSIYQAHRGYQPLFEDRRPRQVGDVLTIVLDEQVSASKNARSNADRNGS 113
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ +G +G G I V +L NGNL
Sbjct: 114 ASLAFDQLPDALDTL---AEYGFDIEGESDFAGGGGAQANNSFTGTITVSVIEVLNNGNL 170
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
+ G +++ +N + G+V P+ + N+V +A+ARI Y G G E
Sbjct: 171 RVRGEKQIAINQGTEFIRFGGVVNPRSITGKNTVPSTSVADARIEYVGDGYINEAQHMGW 230
Query: 228 GHQLIENLSP 237
+ N+SP
Sbjct: 231 LQRFFLNISP 240
>gi|298529924|ref|ZP_07017326.1| flagellar L-ring protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509298|gb|EFI33202.1| flagellar L-ring protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 233
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 21/245 (8%)
Query: 1 MYRYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M Y I++ + L C + + T +P P
Sbjct: 1 MKSYKLIIIVAMAFFLGACAPAQKKSTPMPSYGPEQYPDPGAVTEADSP----------- 49
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK------L 112
SL++ + LF D+RA NVGDI+TV I A T R++++
Sbjct: 50 --SLFQPNRTQFLFGDNRARNVGDIVTVHIEESSDAESRANTEYDRDSTMDLSSMPISAA 107
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+G +M G G+ SR + ++A V +L+ G + + G+
Sbjct: 108 TGAIFPGAGTPGEMQQQFQSQSDRDFEGDGTTSRGSDVQASVSARVVEVLDGGVMHVEGA 167
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
++++VN+E + + V G+VR +DVD++NSVS ++A+A+I G+G + RP +++
Sbjct: 168 RQIKVNNETQIIAVRGLVRSRDVDSNNSVSSTQLADAQIEMYGEGILADQQRPGWLTRVL 227
Query: 233 ENLSP 237
+ P
Sbjct: 228 GRVWP 232
>gi|218679634|ref|ZP_03527531.1| flagellar basal body L-ring protein [Rhizobium etli CIAT 894]
Length = 176
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 109/177 (61%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW DS AALFKD+RALNVGDILTVDI+I+D+A FDN+T RSR NS +FG
Sbjct: 1 SLWSDSQAALFKDARALNVGDILTVDIQINDKASFDNETNRSRTNSSGMNWDVNAQIFG- 59
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
TPQ +L Y ++ GKG I R +K+ LL+AA+VT ILENGNL+ISGSQEVR+N E+
Sbjct: 60 WTPQSKTDLTYGSDTSTDGKGKIERTDKITLLVAAVVTGILENGNLVISGSQEVRLNQEL 119
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
R LNV GIVRPQDV++ N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 120 RILNVAGIVRPQDVNSDNQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 176
>gi|57167699|ref|ZP_00366839.1| flagellar L-ring protein FlgH [Campylobacter coli RM2228]
gi|57020821|gb|EAL57485.1| flagellar L-ring protein FlgH [Campylobacter coli RM2228]
Length = 232
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVETSP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF---- 116
SL+ LF D +A+NV D++TV I+ SR N+ +
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGGSG 107
Query: 117 ---SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + N + G G+ SR E N I+ V IL NGN I GS+
Sbjct: 108 LLGTAIDKVNAYSNIGFQTNSTNNYQGTGTQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSRYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|317047694|ref|YP_004115342.1| flagellar L-ring protein [Pantoea sp. At-9b]
gi|316949311|gb|ADU68786.1| flagellar L-ring protein [Pantoea sp. At-9b]
Length = 236
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 24/241 (9%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
++V L GC +P+ P + S+++
Sbjct: 12 WLVALSLLTLNGCALIPR--------TPLVQGSTTAEPTPSAPPVV--------NGSIFQ 55
Query: 66 D------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ LF+D R N+GD LT+ ++ + A + SR+ S L+ +
Sbjct: 56 GVAPLNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRDGSGSFGLTTVPTGL 115
Query: 120 GQQTPQMNG--NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
L+ +G +GKG + I V +L NGNL + G +++ +
Sbjct: 116 NGLVGASGEKVGLDGEGKNDFTGKGGATANNTFTGTITVTVNQVLSNGNLRVVGEKQIEI 175
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + +G+V P+ + A N+V +A+ARI Y G G E + N+SP
Sbjct: 176 NQGTEFIRFSGVVNPRTISASNAVLSTAVADARIEYVGNGYINEAQTMGWFQRFFLNVSP 235
Query: 238 L 238
+
Sbjct: 236 M 236
>gi|332284022|ref|YP_004415933.1| flagellar L-ring protein [Pusillimonas sp. T7-7]
gi|330427975|gb|AEC19309.1| flagellar L-ring protein [Pusillimonas sp. T7-7]
Length = 227
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 20/241 (8%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ R+S + LC +++ GC +
Sbjct: 2 LKRFSRLFLCCAIAVISGCA--------------LVPPEPIVTGPLTAPPPAPPPAEALA 47
Query: 60 SYSLWRD---SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ ++++ + LF+D R NVGDI+TV I+ A + QT R+ + ++
Sbjct: 48 NGAIYQPSAYGNYPLFEDRRPRNVGDIVTVIIQEKTNAAKNVQTQTDRSGNADFGVTLAP 107
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+ + ++ A+ G GS + + V +L NGNL I+G +++
Sbjct: 108 DFMPSDFAKQSFEMSGG--NAAKGTGSTRADNTFSGTLTTTVIGVLPNGNLQIAGDKQMA 165
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +G++ P+ + N+V ++A+ARI + KG E+ + N+S
Sbjct: 166 INRGSEHIRFSGVIDPRSITGSNTVLSTQVADARIEFRSKGVMDEVQTMGWLQRFFLNIS 225
Query: 237 P 237
P
Sbjct: 226 P 226
>gi|94312672|ref|YP_585881.1| flagellar basal body L-ring protein [Cupriavidus metallidurans
CH34]
gi|93356524|gb|ABF10612.1| flagellar basal body L-ring protein [Cupriavidus metallidurans
CH34]
Length = 237
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 87/234 (37%), Gaps = 20/234 (8%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
IV + GC M P + + S++
Sbjct: 20 IVGLAALASGGCA-----------MMPKEPLVQLPTTARAESRPVSAP-----TGSIFAS 63
Query: 67 SHA---ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
S+A LF+D R NVGDILT+ I + A ++ + SR + +
Sbjct: 64 SYAAGNPLFEDRRPRNVGDILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALAGLF 123
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ N + G G S N I V +L NGNL++SG +++ +N
Sbjct: 124 SSAS-NADIGGTNTLKASGGSSANNTFNGTITVTVLEVLPNGNLVVSGEKQMAINQGAEF 182
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N V ++A+ARI Y KG E + N+ P
Sbjct: 183 IRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLP 236
>gi|218703528|ref|YP_002411047.1| flagellar basal body L-ring protein [Escherichia coli UMN026]
gi|293403358|ref|ZP_06647449.1| flgH [Escherichia coli FVEC1412]
gi|298378969|ref|ZP_06988850.1| flgH [Escherichia coli FVEC1302]
gi|59889783|emb|CAH19139.1| Lateral flagellar L-ring protein (FlgH-like) [Escherichia coli]
gi|218430625|emb|CAR11491.1| Flagellar L-ring protein 2 precursor (Basal body L-ring protein 2)
(FlgH-like) [Escherichia coli UMN026]
gi|284920047|emb|CBG33104.1| lateral flagellar L-ring protein (FlgH-like) [Escherichia coli 042]
gi|291429211|gb|EFF02231.1| flgH [Escherichia coli FVEC1412]
gi|298280082|gb|EFI21586.1| flgH [Escherichia coli FVEC1302]
Length = 221
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
NN++ F + + + D G + + L I V A+ N
Sbjct: 92 NNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|88911318|sp|Q8XSW9|FLGH_RALSO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 229
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 89/243 (36%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M L +SLL M + + P + +++
Sbjct: 1 MRILRLAALGTASLLAAACG-------------MLPPPEPIVQGPTTARPPMPVMAPRQN 47
Query: 61 YSLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
++++ +F+D RA VGD +T+ I + A R+ S +
Sbjct: 48 GAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSKTTSVPT 107
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + ++ KG+ I V +L NGNL++SG ++
Sbjct: 108 FAGMNPGVLSLL--GVSASDANKFDSKGANGATNNFTATITVTVVEVLSNGNLVVSGEKQ 165
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ V S+ +G+V P V+ N+V ++A+AR+ Y G G E + + +
Sbjct: 166 MAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFLS 225
Query: 235 LSP 237
+SP
Sbjct: 226 VSP 228
>gi|90579912|ref|ZP_01235720.1| flagellar L-ring protein precursor [Vibrio angustum S14]
gi|90438797|gb|EAS63980.1| flagellar L-ring protein precursor [Vibrio angustum S14]
Length = 261
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALN 79
+ G P +P+ + + SL+ S L+ D++
Sbjct: 59 RVDPEAGDPAWNPVRPQDKPEHYA-------------TATGSLFNQSQVQDLYDDTKPRG 105
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
+GDI+T+ + A + ++ L+ K + + +
Sbjct: 106 IGDIVTILLEEKTAAKKSASSDLDKSTDLNMK-PIELGGKPVTIRDYSLSYGMSNNNTFA 164
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
G S ++ + I+ V +L NGNL++ G + + +N + V+G +RP D+ N
Sbjct: 165 GSTSADQSNSIKGSISVEVVEVLNNGNLVVRGEKWLMLNTGEEYIRVSGHIRPDDISQDN 224
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+++ +I+ ARI Y G G ++ +
Sbjct: 225 TIASTRISNARIQYSGTGDRQDIQEQNWLSRFFNVAF 261
>gi|305433205|ref|ZP_07402361.1| flagellar L-ring protein FlgH [Campylobacter coli JV20]
gi|304443906|gb|EFM36563.1| flagellar L-ring protein FlgH [Campylobacter coli JV20]
Length = 232
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F VL ++ GC +++ PQ+S + E ++++
Sbjct: 1 MKKVLFYVLPFAFF--GCSATVD-----PQISMKPPAYVEE------LAPKQSNNVETSP 47
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF---- 116
SL+ LF D +A+NV D++TV I+ SR N+ +
Sbjct: 48 GSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTGGSG 107
Query: 117 ---SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + N + G G+ SR E N I+ V IL NGN I GS+
Sbjct: 108 LLGTAIDKVNAYSNIGFQTNSANNYQGTGTQSRNESFNTTISTRVIKILSNGNYFIEGSR 167
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N E + + ++G++RP D+ N++ IA+A+I Y +G R P G ++IE
Sbjct: 168 ELLINGEKQIIQLSGVIRPYDIGQDNTIDSRYIADAKILYKTEGEVDRSTRKPWGSKVIE 227
Query: 234 NLSP 237
+ P
Sbjct: 228 AIWP 231
>gi|118574273|sp|Q7M7T1|FLGH_WOLSU RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 235
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+V ++L GC PQ+S E + +S +
Sbjct: 1 MSGFLLVTLVAALYSGCS------VADPQISFKPPEYVEE------MPAREVEESFGNAG 48
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG-FSLFG 120
SL+ LF D RA+ + D++TV I A + S +S F
Sbjct: 49 SLFGQGDNPLFADRRAMKLNDLVTVIINETASASSSGKKDLSETSSSTMNGPSVTFGGPS 108
Query: 121 QQTPQMNGNLNY---------DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
Q LN + +G G+ R E ++A + ++ENGN I G
Sbjct: 109 QSIGNAVNKLNNFTSFGLSTGNNNSTFAGSGTQQRQESFTTTVSARIIKVMENGNYFIEG 168
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+E+ +N E + + +TG++RP D+ +N+++ IA+A+I Y +G + G ++
Sbjct: 169 GREILINGEKQIMRLTGVIRPYDIGRNNTINSRYIADAKIMYETQGEIKKSTEKGWGTKV 228
Query: 232 IENLSP 237
+E++ P
Sbjct: 229 LESVWP 234
>gi|299068735|emb|CBJ39974.1| flagellar protein of basal-body outer-membrane L ring [Ralstonia
solanacearum CMR15]
Length = 244
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 24/243 (9%)
Query: 3 RYSFIVLC--YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + S C M + + P + +++
Sbjct: 17 RILRLAVLGTASLFAAACG--------------MLPPPEPIVQGPTTARPPMPVMAPRQN 62
Query: 61 YSLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
++++ +F+D RA VGD +T+ I + A R+ S+ +
Sbjct: 63 GAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSMTASVPT 122
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + ++ KG+ I V +L NGNL++SG ++
Sbjct: 123 FAGMNPGVLSLL--GVSASDANKFDSKGANGATNNFTATITVTVVEVLSNGNLVVSGEKQ 180
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ V S+ +G+V P V+ N+V ++A+AR+ Y G G E + + +
Sbjct: 181 MAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFLS 240
Query: 235 LSP 237
+SP
Sbjct: 241 VSP 243
>gi|256020231|ref|ZP_05434096.1| flagellar basal body L-ring protein [Shigella sp. D9]
gi|301645416|ref|ZP_07245357.1| flagellar L-ring protein FlgH [Escherichia coli MS 146-1]
gi|307136861|ref|ZP_07496217.1| flagellar basal body L-ring protein [Escherichia coli H736]
gi|331640716|ref|ZP_08341863.1| flagellar L-ring protein FlgH [Escherichia coli H736]
gi|331666549|ref|ZP_08367423.1| flagellar L-ring protein FlgH [Escherichia coli TA271]
gi|332281393|ref|ZP_08393806.1| lateral flagellar L-ring protein [Shigella sp. D9]
gi|301076300|gb|EFK91106.1| flagellar L-ring protein FlgH [Escherichia coli MS 146-1]
gi|315616824|gb|EFU97441.1| flagellar L-ring family protein [Escherichia coli 3431]
gi|323181550|gb|EFZ66970.1| flagellar L-ring family protein [Escherichia coli 1357]
gi|323191541|gb|EFZ76802.1| flagellar L-ring family protein [Escherichia coli RN587/1]
gi|331040090|gb|EGI12298.1| flagellar L-ring protein FlgH [Escherichia coli H736]
gi|331065773|gb|EGI37657.1| flagellar L-ring protein FlgH [Escherichia coli TA271]
gi|332103745|gb|EGJ07091.1| lateral flagellar L-ring protein [Shigella sp. D9]
Length = 221
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 92 SNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|221069319|ref|ZP_03545424.1| flagellar L-ring protein [Comamonas testosteroni KF-1]
gi|220714342|gb|EED69710.1| flagellar L-ring protein [Comamonas testosteroni KF-1]
Length = 235
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 15/235 (6%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
L + L+ GC + +D + P + + + + SL+
Sbjct: 12 LCALAGALLVSGCVTLNP-----------PPPVDMPSTAP-PVLQPREQTAQNPTGSLFN 59
Query: 66 DS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
S + +F+D RA VGD +TV I A + R N L ++ L G
Sbjct: 60 ASRYRPMFEDQRARMVGDSVTVQIVERVSASQSTDSKVGRANELSTGITSLPLLRGGAEK 119
Query: 125 QMNGNLNYDGGG--ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ L G G+ S IA V +L NG+L+I+G +++ VN +
Sbjct: 120 TVADALTLGAESKNDFKGSGATSSNNTFTGSIATTVVDVLPNGHLVIAGEKQIGVNHNVD 179
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L TG V P+ + ++V+ ++A R+ +G+ E + N+ P
Sbjct: 180 VLRFTGTVDPRSLRPGSTVASTQVANLRVESRSRGQAGEAQSIGWLSRFFLNVMP 234
>gi|118474322|ref|YP_891989.1| flagellar basal body L-ring protein [Campylobacter fetus subsp.
fetus 82-40]
gi|118413548|gb|ABK81968.1| flagellar L-ring protein FlgH [Campylobacter fetus subsp. fetus
82-40]
Length = 234
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 19/244 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +I++ GC + P +S + E +N
Sbjct: 1 MKKKYILVFILPFFAGCAT-----GANPDISMEPPAYVEQ------LPSKENGIGVSSPG 49
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ LF D +A+NV DI+TV I+ ++++ +
Sbjct: 50 SLFGRGDNPLFSDRKAMNVNDIVTVVIQETANQTSKADKTTKKDSTTSLSGGTFTTPSNS 109
Query: 122 QTPQMNGNLN--------YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ ++N G SG G+ +R E N ++A + IL NGN I GS+
Sbjct: 110 ALSGIANDINKISGIGFSAGGANNYSGSGTSTRNETFNTTVSARIIKILNNGNYFIEGSK 169
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
E+ +N+E + + ++G++RP D+ +N + I++A+I Y +G P G +++E
Sbjct: 170 EILINNEKQIMQISGVIRPYDISQNNQIESRYISDAKILYKTEGDLQRATSKPWGTKVLE 229
Query: 234 NLSP 237
+ P
Sbjct: 230 TIWP 233
>gi|58582199|ref|YP_201215.1| flagellar basal body L-ring protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84624091|ref|YP_451463.1| flagellar basal body L-ring protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|75435189|sp|Q5GZP1|FLGH_XANOR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|110816548|sp|Q2P2N8|FLGH_XANOM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|58426793|gb|AAW75830.1| flagellar L-ring protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368031|dbj|BAE69189.1| flagellar L-ring protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 230
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 22/244 (9%)
Query: 1 MYRYSFIVLCYS-----SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R + LL GC ++ ++ M+P+ + +
Sbjct: 1 MSRPPLLSSACLAATCSLLLGGCVAAG-DVRPYAAMAPIVPVVAPTVQ------------ 47
Query: 56 STKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ +++ L+ D RA +VGD+LT+ + A T S+ ++
Sbjct: 48 --PTAGAIYAAGPGLNLYGDRRARDVGDLLTITLIESTTASSSANTSTSKKDATTMASPT 105
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
G A GKG+ +++ ++ + V L NGNL++ G +
Sbjct: 106 LLGAPLTVAGLDVLQNTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVVQGQKN 165
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+R+N + V GIVR D+ N++ K+AEARI+YGG+G + + +
Sbjct: 166 LRLNQGDELVQVQGIVRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNS 225
Query: 235 -LSP 237
LSP
Sbjct: 226 RLSP 229
>gi|90411008|ref|ZP_01219022.1| flagellar L-ring protein precursor [Photobacterium profundum 3TCK]
gi|90328221|gb|EAS44532.1| flagellar L-ring protein precursor [Photobacterium profundum 3TCK]
Length = 256
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 26/257 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG------------ 48
M + + LL GC + + + E + G
Sbjct: 1 MKK--VLAGIVILLLNGCAMDPDLVPSDIEKATTTVDAVEGSTEQDSGLIDMLRRREDPQ 58
Query: 49 ----------IDFKNSDSTKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
K + SL+ L+ D++ +GDI+TV + QA
Sbjct: 59 AGDPAWNSIRPQAKPEHYATATGSLFSSVQAQDLYDDTKPRGIGDIVTVMLEEKTQAKKS 118
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ ++ L + + SG S ++ + I+
Sbjct: 119 ASSDLDKSTDLSMD-PLVLGGKPLTIGDRDLSYEVANANKFSGTTSADQSNSIKGSISVE 177
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL++ G + + +N + V+G +RP D+ N++ +I ARI Y G G
Sbjct: 178 VIDVLANGNLMVRGEKWLTLNTGDEYIRVSGTIRPDDISQENTIESTRITNARIQYSGTG 237
Query: 218 RTTELLRPPIGHQLIEN 234
++
Sbjct: 238 DRQDVQEQGWLANFFNV 254
>gi|119899024|ref|YP_934237.1| flagellar L-ring protein [Azoarcus sp. BH72]
gi|166214814|sp|A1K945|FLGH_AZOSB RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|119671437|emb|CAL95350.1| flagellar L-ring protein precursor [Azoarcus sp. BH72]
Length = 225
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 16/225 (7%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKD 74
GC S + S+ P + + + S+++ S LF+D
Sbjct: 13 SGCAS-------------IYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFED 59
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL--NY 132
RA NVGDI+T+++ + A +R +++ +S L +
Sbjct: 60 RRARNVGDIITINLVERNTAQKSANASATRGSAITGGISLTAPNIASLANAKLNGLQADV 119
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
SG+G+ + N I+ V + NGNL++SG + V +N + +G++ P
Sbjct: 120 GLDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEKMVAINQGNEFIRFSGVINP 179
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V A N+V ++A+ARI Y G G E + ++P
Sbjct: 180 TTVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAP 224
>gi|261253611|ref|ZP_05946184.1| flagellar L-ring protein FlgH [Vibrio orientalis CIP 102891]
gi|260937002|gb|EEX92991.1| flagellar L-ring protein FlgH [Vibrio orientalis CIP 102891]
Length = 260
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 15/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRAL 78
++G P SP+ + ++ SL+ A+ L+ DS+
Sbjct: 57 GRNDPVSGDPAWSPIHPKHQPEHYA-------------AETGSLFNSGRASSLYDDSKPR 103
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + A + S+NN N + N +
Sbjct: 104 GIGDIITVTLDESTNASKSSDADLSKNNDATMD-PLEVGGQQLNIGDYNFSYNLSNDNSF 162
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
SG + +++ L+ I V +L NGNL+I G + + +N + ++G +RP D+D
Sbjct: 163 SGSAAANQSNSLSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDYQ 222
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N+++ +I+ ARI Y G G ++ P +
Sbjct: 223 NTIASTRISNARIQYSGTGTQQDMQEPGFLARFFNV 258
>gi|152990361|ref|YP_001356083.1| flagellar L-ring protein FlgH [Nitratiruptor sp. SB155-2]
gi|151422222|dbj|BAF69726.1| flagellar L-ring protein FlgH [Nitratiruptor sp. SB155-2]
Length = 206
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + + SL+ + LF D +A VGD++T++I +
Sbjct: 4 APKAPMKPKILSEKEVMQTPKPQVPGSLYS-GYDNLFSDMKAYEVGDVVTININENLSGK 62
Query: 96 FDNQTGRSRNNSLHRKLSG-GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ SR+NS+ + +L+ + SG+G R+ KL I
Sbjct: 63 GQSDVQTSRSNSVGLGVPTPKIKGRSVVQGDELLSLDGSSQNSFSGQGGTKRSAKLIAKI 122
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
A V + NGNL I G + +++N + + L + GIV P+D+ NS+ +I++ + Y
Sbjct: 123 TARVVKVYPNGNLYIVGKKYLKINSDTQYLKIAGIVNPKDISPDNSIDSSRISDMYVEYN 182
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
G+G T+ P + + + P
Sbjct: 183 GQGFVTDGQEPGWLAKFVMKIWP 205
>gi|300899453|ref|ZP_07117702.1| flagellar L-ring protein FlgH [Escherichia coli MS 198-1]
gi|300356959|gb|EFJ72829.1| flagellar L-ring protein FlgH [Escherichia coli MS 198-1]
Length = 253
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 64 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 123
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
NN++ F + + + D G + + L I V A+ N
Sbjct: 124 NNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 178
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 179 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 238
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 239 AGWLTRLFNHPLFPI 253
>gi|325529017|gb|EGD06030.1| flagellar basal body L-ring protein [Burkholderia sp. TJI49]
Length = 229
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFD 97
E + S + S++ + LF+D R NVGDILT+ I + A
Sbjct: 32 EPIIQQPMTAQPPMPVSMQAPGSIFNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKS 91
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ +R + + L G + NL+ G + G S A N I
Sbjct: 92 SGANTNRQGNTDFNVPTAGFLGGLFSK---ANLSASGDNKFAATGGASAANTFNGTITVT 148
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y KG
Sbjct: 149 VTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGSNSVYSTQVADARIEYSAKG 208
Query: 218 RTTELLRPPIGHQLIENLSP 237
E + N++P
Sbjct: 209 YINEAETMGWLQRFFLNIAP 228
>gi|329898286|ref|ZP_08272369.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC3088]
gi|328920851|gb|EGG28294.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC3088]
Length = 226
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 21/242 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+Y +++L SL+ GC S S + + +P+ + + +
Sbjct: 1 MKY-WMLLAGLSLIVGCASKPS-LERYNEFAPIRP--------------LQPVVTGPATG 44
Query: 62 SLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR----KLSGGF 116
S+ + +LF+ R VGDI+T+ + QA + R + + S F
Sbjct: 45 SILNNRSGLSLFEGQREWYVGDIVTIVLSETTQASRNTNLSTERVSENNVLGTRGPSELF 104
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G + S G GS ++ L +I A+VT +L NGNL++ G +++
Sbjct: 105 PQTGFIGKALPYLKRDGATVKSEGGGSTAQNASLEGVITAMVTEVLPNGNLVVQGEKQLS 164
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ + + V GIVR D+ NSV ++A A+I+Y G G +P ++
Sbjct: 165 MTEGSEFIQVRGIVRSTDIQMDNSVLSQRLANAQIAYKGTGDLATSTQPGWLTSMLFKFW 224
Query: 237 PL 238
PL
Sbjct: 225 PL 226
>gi|323976266|gb|EGB71359.1| flagellar L-ring protein [Escherichia coli TW10509]
Length = 221
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+NS+ F + N + + D G + + L I V A+ N
Sbjct: 92 SNSVDITAPTVFG-----HTKNNLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|226944495|ref|YP_002799568.1| flagellar L-ring protein [Azotobacter vinelandii DJ]
gi|226719422|gb|ACO78593.1| Flagellar L-ring protein [Azotobacter vinelandii DJ]
Length = 232
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDS--HAALFKDSRALNVGDILTVDIRIDDQAV 95
L + + ++ + + S+++ + LF+D R +GDILT+ + A
Sbjct: 33 LPRTSVVKDQPLEVPQMPLRQANGSIFQVGHIYQPLFEDRRPRMIGDILTIVLNEQVSAS 92
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
++ + +R++ + S + G SG G I
Sbjct: 93 KNSASNANRSSGMSLGFSTTSDKPEKVGEF---GAEASGDNDFSGSGGSRANNSFTGTIT 149
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V ++ NGNL + G +++ +N + +G+V P+ + N+VS ++ ARI Y G
Sbjct: 150 VTVQQVMPNGNLRVVGEKQIAINQGTEYIRFSGLVNPRTITVQNTVSSTLVSMARIEYVG 209
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
G E + N+SP
Sbjct: 210 DGYINEAQHMGWLQRFFLNVSP 231
>gi|331671807|ref|ZP_08372603.1| flagellar L-ring protein FlgH [Escherichia coli TA280]
gi|331070796|gb|EGI42155.1| flagellar L-ring protein FlgH [Escherichia coli TA280]
Length = 246
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 57 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 116
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 117 SNTVDIGAPAIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 171
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 172 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 231
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 232 AGWLTRLFNHPLFPI 246
>gi|264676573|ref|YP_003276479.1| flagellar L-ring protein [Comamonas testosteroni CNB-2]
gi|299531283|ref|ZP_07044693.1| flagellar L-ring protein [Comamonas testosteroni S44]
gi|262207085|gb|ACY31183.1| flagellar L-ring protein [Comamonas testosteroni CNB-2]
gi|298720690|gb|EFI61637.1| flagellar L-ring protein [Comamonas testosteroni S44]
Length = 235
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 15/235 (6%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
L + L+ GC + +D + P + + + + SL+
Sbjct: 12 LCALAGALLVSGCVTLNP-----------PPPVDMPSTAP-PVLQPREQTAQAPTGSLFN 59
Query: 66 DS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
S + +F+D RA VGD +TV I A + R N L ++ L G
Sbjct: 60 ASRYRPMFEDQRARMVGDSVTVQIVERVSASQSTDSKVGRANELSTGITSLPLLRGGAEK 119
Query: 125 QMNGNLNYDGGG--ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ L G G+ S IA V +L NG+L+I+G +++ VN +
Sbjct: 120 TVADALTLGAESKNDFKGSGATSSNNTFTGSIATTVVDVLPNGHLVIAGEKQIGVNHNVD 179
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L TG V P+ + ++V+ ++A R+ +G+ E + N+ P
Sbjct: 180 VLRFTGTVDPRSLRPGSTVASTQVANLRVESRSRGQAGEAQSIGWLSRFFLNVMP 234
>gi|187926951|ref|YP_001893296.1| flagellar L-ring protein [Ralstonia pickettii 12J]
gi|241665280|ref|YP_002983639.1| flagellar L-ring protein [Ralstonia pickettii 12D]
gi|187728705|gb|ACD29869.1| flagellar L-ring protein [Ralstonia pickettii 12J]
gi|240867307|gb|ACS64967.1| flagellar L-ring protein [Ralstonia pickettii 12D]
Length = 247
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 91/237 (38%), Gaps = 11/237 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + + L C +P +P+ R P + + + + +
Sbjct: 21 MVRLAVLGT-AALLATAC-------GMLPPPAPIVQG-PTTARPPMPVMAPRQNGAIYQE 71
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ +F+D RA VGD +T+ I + A +R S+ + +
Sbjct: 72 VASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVNRTGSMSASVPTFAGMNA 131
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ ++ KG+ I V +L NGNL++SG +++ V
Sbjct: 132 GVLSLL--GVSASDANKFDSKGANGAQNNFTATITVTVVEVLSNGNLVVSGEKQMAVGQG 189
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
S+ +G+V P V+ N+V ++A+AR+ Y G G E + + +SP
Sbjct: 190 TESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAESQQMGWLSRFFLTVSP 246
>gi|126668561|ref|ZP_01739515.1| Flagellar basal body L-ring protein [Marinobacter sp. ELB17]
gi|126626966|gb|EAZ97609.1| Flagellar basal body L-ring protein [Marinobacter sp. ELB17]
Length = 233
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFK 73
GC S + P+ +P+ + ++ S+++ S +
Sbjct: 27 GCTAMSRPRAMPDDPEYAPVRA--------------QAMMQRDLETGSIYQISRNYNFYG 72
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYD 133
D+ ALNVGD+LTV + +A + +T S+++ + Q+ +
Sbjct: 73 DTVALNVGDVLTVTLSESTRASKNAETSISKDSDISLTEPNILG-----RNQLGLATAIE 127
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
G ++ L I VT +L NG L I G + + + + + +TG+VRPQ
Sbjct: 128 QQRDFEGAAEADQSNSLAGSITVTVTEVLPNGVLRIRGEKWLSLTNGEEYIRLTGLVRPQ 187
Query: 194 DVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
D+ N+++ ++IA+ARI+YGG G + + + + PL
Sbjct: 188 DIKPDNTLASNRIADARIAYGGTGDFDQANQMGWMGRFFNSEWWPL 233
>gi|213648929|ref|ZP_03378982.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 211
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 82/199 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P G + S +S + LF+D R N+GD LT+ ++ + A +
Sbjct: 13 ATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSS 72
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
SR+ ++ GG + +GKG + + + + V
Sbjct: 73 ANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVD 132
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + NSV ++A+ARI Y G G
Sbjct: 133 QVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYI 192
Query: 220 TELLRPPIGHQLIENLSPL 238
E + NLSP+
Sbjct: 193 NEAQNMGWLQRFFLNLSPM 211
>gi|332558505|ref|ZP_08412827.1| FlgH [Rhodobacter sphaeroides WS8N]
gi|332276217|gb|EGJ21532.1| FlgH [Rhodobacter sphaeroides WS8N]
Length = 222
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ + LF D R
Sbjct: 19 CSTYVEDRASE-------------AWAPVYPVEEAERLDSLPTGGIYSSTSRGLFVSDRR 65
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+TVD A SR + L +L +G L+
Sbjct: 66 AARVGDIVTVDFDEKFSASKSQSASGSRKSDYAIDLPDALTL-----GLDDGVLDNSTDQ 120
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
SGKG+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 121 GFSGKGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 180
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N V+ D+IA A I Y G G T + +P + + +SPL
Sbjct: 181 PDNVVTSDRIAHAEIKYIGAGDTADTAKPGWLRRGLSVVSPL 222
>gi|126462481|ref|YP_001043595.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104145|gb|ABN76823.1| flagellar L-ring protein [Rhodobacter sphaeroides ATCC 17029]
Length = 222
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ + LF D R
Sbjct: 19 CSTYVEDRASE-------------AWAPVYPVEEAERLDSLPTGGIYSSTSRGLFVSDRR 65
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+TVD A SR + L +L +G L+
Sbjct: 66 AARVGDIVTVDFDEKFSASKSQSASGSRKSDYAIDLPDALTL-----GLDDGVLDNSTDQ 120
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
SGKG+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 121 GFSGKGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 180
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N V+ D+IA A I Y G G T + +P + + +SPL
Sbjct: 181 PDNVVTSDRIAHAEIKYIGAGDTADTAKPGWLRRGLSVVSPL 222
>gi|300936129|ref|ZP_07151068.1| flagellar L-ring protein FlgH [Escherichia coli MS 21-1]
gi|300458707|gb|EFK22200.1| flagellar L-ring protein FlgH [Escherichia coli MS 21-1]
Length = 246
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 57 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 116
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 117 SNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 171
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 172 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 231
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 232 AGWLTRLFNHPLFPI 246
>gi|161614596|ref|YP_001588561.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363960|gb|ABX67728.1| hypothetical protein SPAB_02346 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 202
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 82/199 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P G + S +S + LF+D R N+GD LT+ ++ + A +
Sbjct: 4 ATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSS 63
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
SR+ ++ GG + +GKG + + + + V
Sbjct: 64 ANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVD 123
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + NSV ++A+ARI Y G G
Sbjct: 124 QVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYI 183
Query: 220 TELLRPPIGHQLIENLSPL 238
E + NLSP+
Sbjct: 184 NEAQNMGWLQRFFLNLSPM 202
>gi|170021357|ref|YP_001726311.1| flagellar basal body L-ring protein [Escherichia coli ATCC 8739]
gi|169756285|gb|ACA78984.1| flagellar L-ring protein [Escherichia coli ATCC 8739]
Length = 221
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 92 SNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLARLFNHPLFPI 221
>gi|17548569|ref|NP_521909.1| flagellar L-ring protein precursor [Ralstonia solanacearum GMI1000]
gi|17430817|emb|CAD17499.1| probable flagellar l-ring protein precursor (basal body l-ring
protein) [Ralstonia solanacearum GMI1000]
Length = 244
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 21/240 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
L +SLL M + + P + +++ ++
Sbjct: 19 LRLAALGTASLLAAACG-------------MLPPPEPIVQGPTTARPPMPVMAPRQNGAI 65
Query: 64 WR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
++ +F+D RA VGD +T+ I + A R+ S +
Sbjct: 66 YQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSKTTSVPTFAG 125
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ + ++ KG+ I V +L NGNL++SG +++ V
Sbjct: 126 MNPGVLSLL--GVSASDANKFDSKGANGATNNFTATITVTVVEVLSNGNLVVSGEKQMAV 183
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
S+ +G+V P V+ N+V ++A+AR+ Y G G E + + ++SP
Sbjct: 184 GQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFLSVSP 243
>gi|167822322|ref|ZP_02453793.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 9]
Length = 211
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 21/229 (9%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-- 68
+ L GC E + + + S++ +
Sbjct: 1 AALALAGCA----------------QIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAG 44
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+D R NVGDILT+ I + A + +R + + L G
Sbjct: 45 RPLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNK---A 101
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
NL+ G + G S A N I VT +L NGNL++SG +++ +N + +G
Sbjct: 102 NLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSG 161
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
IV P + NSV ++A+ARI Y KG E + N++P
Sbjct: 162 IVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAP 210
>gi|167585197|ref|ZP_02377585.1| flagellar basal body L-ring protein [Burkholderia ubonensis Bu]
Length = 229
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + S + S++ + LF+D R NVGDILT+ I + A
Sbjct: 30 PREPIIQQPMSAQPPIPPSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 89
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + + L G NL+ GG + G S A N I
Sbjct: 90 KSSGANTNRAGNTNFDVPTAGFLGGLFAK---ANLSAAGGNKFTATGGASAANTFNGTIT 146
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNLI+SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 147 VTVTNVLPNGNLIVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVFSTQVADAKIEYSA 206
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N+SP
Sbjct: 207 KGYINEAETMGWLQRFFLNISP 228
>gi|207728349|ref|YP_002256743.1| flagellar l-ring protein precursor [Ralstonia solanacearum MolK2]
gi|206591595|emb|CAQ57207.1| flagellar l-ring protein precursor (basal body l-ring protein)
[Ralstonia solanacearum MolK2]
Length = 229
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 23/244 (9%)
Query: 1 MYRYSFIVLCYSSLLF-GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M VL +SLL C M + + P + ++
Sbjct: 1 MRIVRLAVLGTASLLATACG--------------MLPPPEPIVQGPTTARPPMPVMAPRQ 46
Query: 60 SYSLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ ++++ +F+D RA VGD +T+ I + A R+ S +
Sbjct: 47 NGAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSKTTSVP 106
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ + ++ KG+ I V +L NGNL++SG +
Sbjct: 107 TFAGMNPGVLSLL--GVSASDANKFDSKGANGAQNNFTATITVTVVEVLSNGNLVVSGEK 164
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
++ V S+ +G+V P V+ N+V ++A+AR+ Y G G E + +
Sbjct: 165 QMAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFL 224
Query: 234 NLSP 237
++SP
Sbjct: 225 SVSP 228
>gi|78485809|ref|YP_391734.1| flagellar L-ring protein [Thiomicrospira crunogena XCL-2]
gi|110816544|sp|Q31FL3|FLGH_THICR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|78364095|gb|ABB42060.1| Flagellar L-ring protein FlgH [Thiomicrospira crunogena XCL-2]
Length = 250
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 25/247 (10%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ V+ S +L GC ++ + ++ + P + K+ S
Sbjct: 18 KLILGVMVSSIVLSGCSATPERM-------------EKFSYEPNY-PMNIPKKTVPKNGS 63
Query: 63 LWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG------- 114
L++ A LF DSRA VGDI+T+++ + A ++ ++N + L+G
Sbjct: 64 LYQSGDAITLFDDSRAHKVGDIITINLAENFDAKKKDEAKYDKSNQQNFGLNGQAAVGSN 123
Query: 115 ---GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+ Y G+ +GK + + L+ IA V ++ NGNL+I G
Sbjct: 124 ASVFGGNVSVPGLGSGIGIGYGSDGSFAGKSDVKQKSSLSGSIAVTVVQVISNGNLVIRG 183
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+ + +++ + GIVRPQD+ N++ +K+A+ R+ Y G + + RP Q
Sbjct: 184 EKWITIHEGEEVIRFAGIVRPQDIRPDNTIDSEKVADVRLIYKDTGISGDTNRPGAMTQW 243
Query: 232 IENLSPL 238
+ PL
Sbjct: 244 LHKYWPL 250
>gi|218708807|ref|YP_002416428.1| flagellar basal body L-ring protein [Vibrio splendidus LGP32]
gi|254789287|sp|B7VKM5|FLGH_VIBSL RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|218321826|emb|CAV17797.1| Flagellar L-ring protein precursor [Vibrio splendidus LGP32]
Length = 258
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALN 79
I G P +P+ + + + SL+ +H +++ DS+
Sbjct: 56 RTDPIAGDPAWAPINPKKKQEHYA-------------AATGSLFNANHIGSMYDDSKPRG 102
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
+GDI+TV + + +A S++N + + + N + + +
Sbjct: 103 IGDIITVALDENTRATKKANADMSKSNDASME-PLAVGGENLELGKYNFSYDLSNTNTFA 161
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
G S +++ ++ I V +L NGNL++ G + + +N + ++G +RP D+D N
Sbjct: 162 GDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFEN 221
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+++ ++++ ARI Y G G ++ P +
Sbjct: 222 TIASNRVSNARIQYSGTGVQKDMQEPGFLARFFNV 256
>gi|323495374|ref|ZP_08100451.1| flagellar basal body L-ring protein [Vibrio brasiliensis LMG 20546]
gi|323310297|gb|EGA63484.1| flagellar basal body L-ring protein [Vibrio brasiliensis LMG 20546]
Length = 259
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 31/261 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ--------------------------MSPM 34
M R I L +++ GC + + P +
Sbjct: 1 MNR--LIALFALTVVSGC-TMLEPPVETPDVVQGTTTVDAVEGDKSDADSTGIIDTLRGR 57
Query: 35 GSSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQ 93
+ + + + ++ SL+ ++L+ DS+ +GDI+TV + +
Sbjct: 58 NDPVAGDPAWAPIHPTHRPEHYAAETGSLFNVAQTSSLYDDSKPRGIGDIITVTLDESTK 117
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A + S+NN N + N + SG + +++ ++
Sbjct: 118 AAKSSDADLSKNNDASMD-PLEVGGQQLNVGDYNFSYNLSNDNSFSGSAAANQSNSISGS 176
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
I V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y
Sbjct: 177 ITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDYDNTIASNRISNARIQY 236
Query: 214 GGKGRTTELLRPPIGHQLIEN 234
G G ++ P +
Sbjct: 237 SGTGTQQDMQEPGFLARFFNV 257
>gi|312882656|ref|ZP_07742393.1| flagellar basal body L-ring protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369617|gb|EFP97132.1| flagellar basal body L-ring protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 259
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 31/261 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP--------------------------M 34
M R V+ + ++L GC S + P +
Sbjct: 1 MKR--LFVIFFVTILSGC-SFLPPPIDTPDIEAGTTTIDAVEGDKLDENSSGILDTLRGR 57
Query: 35 GSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQ 93
+ ++ + K ++ SL+ S ++L+ DS+ +GDI+TV + +
Sbjct: 58 SDPIPDDPSWAPIHPKHKPQHYAAETGSLFNTVSASSLYDDSKPRGIGDIITVTLNESTK 117
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A + S+NN+ + N + + +G + +++ L+
Sbjct: 118 AAKSSDADLSKNNAASMDPLSVGGQELS-IGEYNFSYELSNDNSFTGSAAANQSNSLSGS 176
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
I V +L NGNL+I G + + +N + ++G +R D+ + N+++ ++I+ ARI Y
Sbjct: 177 ITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRSDDITSDNTIASNRISNARIQY 236
Query: 214 GGKGRTTELLRPPIGHQLIEN 234
G G ++ P +
Sbjct: 237 SGTGNQQDMQEPGFLARFFNV 257
>gi|187925758|ref|YP_001897400.1| flagellar basal body L-ring protein [Burkholderia phytofirmans
PsJN]
gi|187716952|gb|ACD18176.1| flagellar L-ring protein [Burkholderia phytofirmans PsJN]
Length = 233
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + L + L GC + P + S S++
Sbjct: 17 ALVQLTLLAALGGCG-----------LVPKQPITQQPMTALPPMPPSAQSP-----GSIY 60
Query: 65 RDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R NVGDILT+ I+ + A + G +R+ + + + L G
Sbjct: 61 NPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGAGVNRSGNTNFDVPTAGFLGGLF 120
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
NL+ +G + G + + + +I VT +L NGNL++SG +++ +N
Sbjct: 121 GKV---NLSANGANKFAATGGANASNTFSGVITVTVTGVLPNGNLMVSGEKQMLINQGNE 177
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P + N+V ++A+A+I Y KG E + N+SP
Sbjct: 178 FVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYIDESENMGFLQRFFLNVSP 232
>gi|146305253|ref|YP_001185718.1| flagellar basal body L-ring protein [Pseudomonas mendocina ymp]
gi|145573454|gb|ABP82986.1| flagellar L-ring protein [Pseudomonas mendocina ymp]
Length = 220
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 20/225 (8%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKD 74
GC S + M D ++ P S S L+R ++ +L D
Sbjct: 14 GGCAS----------FNEMLPDEDSSHYEPLAL---DYSQPPTTSGGLFRSGYSGSLVGD 60
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA+ VGDILTV + Q+ T +++ + + Q + +
Sbjct: 61 KRAVRVGDILTVVLDESTQSSKSAGTSFGKSSGVSVGIPTVLGKQYDQL-----ESSAEA 115
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
G S+ L IA V +L NG L+I G + +R+N + + G+VR D
Sbjct: 116 ERDFKGSARSSQQNTLRGSIAVTVHQVLPNGTLLIKGEKALRLNQGDEYIRLVGLVRVDD 175
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
++ N VS +A ARISY G+G + + + + PL
Sbjct: 176 INRSNQVSSQNVANARISYAGRGVLNDSNSAGWLTRFFTHPIFPL 220
>gi|86146152|ref|ZP_01064478.1| flagellar L-ring protein precursor [Vibrio sp. MED222]
gi|85836099|gb|EAQ54231.1| flagellar L-ring protein precursor [Vibrio sp. MED222]
Length = 258
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 28/259 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCH------------------------SSISEITGIPQMSPMGS 36
M R + L + GC S+ I +
Sbjct: 1 MKR--IVCLALFLSMTGCAPLAPIETPAQENATTVVDAVEGDKSAQESSGIIDTLRDRTD 58
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + + K + SL+ +H +++ DS+ +GDI+TV + + +A
Sbjct: 59 PIAGDPAWAPINPKKKQEHYAAATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRAT 118
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
S++N + + + N + + +G S +++ ++ I
Sbjct: 119 KKANADMSKSNDASME-PLAVGGENLELGKYNFSYDLSNTNTFAGDASANQSNSISGYIT 177
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL++ G + + +N + ++G +RP D+D N+++ ++++ ARI Y G
Sbjct: 178 VEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSG 237
Query: 216 KGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 238 TGVQKDMQEPGFLARFFNV 256
>gi|253688969|ref|YP_003018159.1| flagellar L-ring protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755547|gb|ACT13623.1| flagellar L-ring protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 239
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 82/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R N+GD LT+ ++ + A +
Sbjct: 41 PTTAQPASPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNIGDTLTIVLQENVSASKSSS 100
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN S ++ L+ G +GKG + + I V
Sbjct: 101 ANAARNGSSTFGVTTTPRYLEGPLGNNRAALDATGTNDFTGKGGANANNTFSGTITVTVG 160
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 161 QVLANGNLQVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 220
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 221 NEAQNMGWLQRFFLNVSP 238
>gi|54308100|ref|YP_129120.1| flagellar basal body L-ring protein [Photobacterium profundum SS9]
gi|81615376|sp|Q6LTQ7|FLGH_PHOPR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|46912526|emb|CAG19318.1| putative flagellar L-ring protein FlgH [Photobacterium profundum
SS9]
Length = 256
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 81/257 (31%), Gaps = 26/257 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSL-------------------DEN 41
M + + LL GC + + D
Sbjct: 1 MKK--VLAGIVILLLNGCAMDPDLAPSDIEKATTTVDAVEGSTEQDSGLIDMLRRREDPQ 58
Query: 42 NRMPFLGIDFKNSDSTK---KSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P + + SL+ L+ D++ +GDI+TV + QA
Sbjct: 59 AGDPAWNPIRPQAKPEHYATATGSLFSSIQAQDLYDDTKPRGIGDIVTVMLEEKTQAKKS 118
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ ++ L + + SG S ++ + I+
Sbjct: 119 ASSDLDKSTDLSMD-PLVLGGKPLTIGDRDLSYEVANANKFSGTTSADQSNSIKGSISVE 177
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + V+G +RP D+ N++ +I ARI Y G G
Sbjct: 178 VIDVLANGNLMIRGEKWLTLNTGDEYIRVSGTIRPDDISQENTIESTRITNARIQYSGTG 237
Query: 218 RTTELLRPPIGHQLIEN 234
++
Sbjct: 238 NRQDVQEQGWLANFFNV 254
>gi|186477700|ref|YP_001859170.1| flagellar basal body L-ring protein [Burkholderia phymatum STM815]
gi|184194159|gb|ACC72124.1| flagellar L-ring protein [Burkholderia phymatum STM815]
Length = 236
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + S + S++ + LF+D R NVGDILT+ I + A
Sbjct: 37 PKQPITQQPMTAVPPAPPSLQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVISENINAT 96
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +RN + L G NL+ G G + + + I
Sbjct: 97 KSSGANTNRNGETKFGVPTAGFLGGLFGKV---NLDATGANTFKATGGANASNTFSGTIT 153
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V + NGNL++SG +++ +N + +G+V P + + N+V ++A+A+I Y
Sbjct: 154 VTVIGVQPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISSLNAVYSTQVADAKIEYSA 213
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 214 KGYIDESQNMSWLQRFFLNVAP 235
>gi|224419002|ref|ZP_03657008.1| flagellar basal body L-ring protein [Helicobacter canadensis MIT
98-5491]
gi|253827948|ref|ZP_04870833.1| flagellar L-ring protein precursor [Helicobacter canadensis MIT
98-5491]
gi|313142515|ref|ZP_07804708.1| flagellar L-ring protein [Helicobacter canadensis MIT 98-5491]
gi|253511354|gb|EES90013.1| flagellar L-ring protein precursor [Helicobacter canadensis MIT
98-5491]
gi|313131546|gb|EFR49163.1| flagellar L-ring protein [Helicobacter canadensis MIT 98-5491]
Length = 244
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ Y L GC ++ PQ+S + E + D+ S++
Sbjct: 15 LAFIYGFLFNGCATT------DPQISFKPPAYVEE------LPPKEEEDNFGNPGSIFGR 62
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS--------- 117
LF D RA+ + D++TV I QA + N+S
Sbjct: 63 GDNLLFSDRRAMQLNDLVTVIINQTAQASSSANKNLNENSSGTFGGPSLSYAGSSSSIGS 122
Query: 118 -LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
+ G G + +G G+ +R E IAA + +L+NGN I GS+EV
Sbjct: 123 IVNGINNATGFGINLGNNTSTYAGTGTQNRQETFTTTIAARIIKVLQNGNYFIEGSREVL 182
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N E + ++++G+VRP D+ +N++ IA+A+I Y +G + G +LIE++
Sbjct: 183 INGEKQIIHLSGVVRPTDIARNNTIESQYIADAKIMYDTQGELKKSTEKGWGTKLIESVW 242
Query: 237 P 237
P
Sbjct: 243 P 243
>gi|221639492|ref|YP_002525754.1| Flagellar L-ring protein [Rhodobacter sphaeroides KD131]
gi|221160273|gb|ACM01253.1| Flagellar L-ring protein precursor [Rhodobacter sphaeroides KD131]
Length = 218
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ + LF D R
Sbjct: 15 CSTYVEDRASE-------------AWAPVYPVEEAGRLDSLPTGGIYSSTSRGLFVSDRR 61
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+TVD A SR + L +L +G L+
Sbjct: 62 AARVGDIVTVDFDEKFSASKSQSASGSRKSDYAIDLPDALTL-----GLDDGVLDNSTDQ 116
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
SGKG+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 117 GFSGKGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 176
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N V+ D+IA A I Y G G T + +P + + +SPL
Sbjct: 177 PDNVVTSDRIAHAEIKYIGAGDTADTAKPGWLRRGLSVVSPL 218
>gi|323178491|gb|EFZ64069.1| flagellar L-ring family protein [Escherichia coli 1180]
Length = 221
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ FS + + + D G + + L I V A+ N
Sbjct: 92 SNTVDIGAPTIFS-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|319790432|ref|YP_004152065.1| flagellar L-ring protein [Thermovibrio ammonificans HB-1]
gi|317114934|gb|ADU97424.1| flagellar L-ring protein [Thermovibrio ammonificans HB-1]
Length = 231
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 19/236 (8%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + SL+ C S + + SL+
Sbjct: 11 VLVGIVILSLVGSCGSD-RNKGSLVAF--------------PAAPPPEIPQPKPSPGSLF 55
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL--SGGFSLFGQQ 122
++ LF D +A VGD++T+ + + Q S+ +S + + F
Sbjct: 56 T-GYSNLFSDPKAHKVGDVVTITVYENLSGSGSVQNDTSKKSSYNLSVSKPILFGRPFPG 114
Query: 123 TPQMNG-NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + + +GKGS SR+ KL I+A V + NG+L I G + V++ND+
Sbjct: 115 RSKDPLVGFSTAPSKSFAGKGSTSRSAKLIATISARVVKVYPNGDLYIVGKKVVKINDDE 174
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L ++GIVRP+D+ N+V KIA+ + Y GKG + RP + + + P
Sbjct: 175 EVLRISGIVRPEDIGPDNTVPSSKIADMYVEYNGKGYFNQESRPGWLARFLAKIWP 230
>gi|167717663|ref|ZP_02400899.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
DM98]
Length = 210
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--A 69
+ L GC E + + + S++ +
Sbjct: 1 ALALAGCA----------------QIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGR 44
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGN 129
LF+D R NVGDILT+ I + A + +R + + L G N
Sbjct: 45 PLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNK---AN 101
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
L+ G + G S A N I VT +L NGNL++SG +++ +N + +GI
Sbjct: 102 LSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGI 161
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V P + NSV ++A+ARI Y KG E + N++P
Sbjct: 162 VNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAP 209
>gi|300696916|ref|YP_003747577.1| flagellar protein of basal-body outer-membrane L ring [Ralstonia
solanacearum CFBP2957]
gi|299073640|emb|CBJ53160.1| flagellar protein of basal-body outer-membrane L ring [Ralstonia
solanacearum CFBP2957]
Length = 244
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 24/243 (9%)
Query: 3 RYSFIVLC--YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + S L C M + + P + +++
Sbjct: 17 RIVRLAVLGTASLLAAACG--------------MLPPPEPIVQGPTTARPPMPVMAPRQN 62
Query: 61 YSLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
++++ +F+D RA VGD +T+ I + A R+ S +
Sbjct: 63 GAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSKTTSVPT 122
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + ++ KG+ I V +L NGNL++SG ++
Sbjct: 123 FAGMNPGVLSLL--GVSASDANKFDSKGANGAQNNFTATITVTVVEVLSNGNLVVSGEKQ 180
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ V S+ +G+V P V+ N+V ++A+AR+ Y G G E + + +
Sbjct: 181 MAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFLS 240
Query: 235 LSP 237
+SP
Sbjct: 241 VSP 243
>gi|77463649|ref|YP_353153.1| flagellar L-ring protein [Rhodobacter sphaeroides 2.4.1]
gi|77388067|gb|ABA79252.1| Flagellar L-ring protein [Rhodobacter sphaeroides 2.4.1]
Length = 222
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ + LF D R
Sbjct: 19 CSTYVEDRASE-------------AWAPVYPVEEAGRLDSLPTGGIYSSASRGLFVSDRR 65
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+TVD A SR + L +L +G L+
Sbjct: 66 AARVGDIVTVDFDEKFSASKSQSASGSRKSDYAIDLPDALTL-----GLDDGVLDNSTDQ 120
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
SGKG+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 121 GFSGKGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 180
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N V+ D+IA A I Y G G T + +P + + +SPL
Sbjct: 181 PDNVVTSDRIAHAEIKYIGAGDTADTAKPGWLRRGLSVVSPL 222
>gi|124268251|ref|YP_001022255.1| flagellar basal-body L-ring protein [Methylibium petroleiphilum
PM1]
gi|124261026|gb|ABM96020.1| flagellar basal-body L-ring protein [Methylibium petroleiphilum
PM1]
Length = 224
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 18/235 (7%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
L LLFGC + M+P D + +P + + +++
Sbjct: 7 RVAALAPLVLLFGCQA----------MAPKVDIADTSPVLPQAVV-----APPVNNGAIF 51
Query: 65 R-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ S+ LF+D RA VGD +TV I A + + +N S++ +S
Sbjct: 52 QGASYRPLFEDHRARLVGDTITVQIVEKVAASQQSTSSIDKNGSVNGSISALPFFAPNSF 111
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ + A GKG+ + A + I A V +L NG+L+ISG +++ VN +
Sbjct: 112 KRASA--TGSNEQAFEGKGTTASANTFSGTITATVINVLPNGHLVISGEKQIGVNQHVDV 169
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
L +G V P+ + NSV+ +IA RI G+G E + N+ PL
Sbjct: 170 LRFSGQVDPRAIQPGNSVASAQIANVRIEQRGRGAQAEAQGIGWLGRFFLNVLPL 224
>gi|83747651|ref|ZP_00944687.1| FlgH [Ralstonia solanacearum UW551]
gi|207739734|ref|YP_002258127.1| flagellar l-ring protein precursor [Ralstonia solanacearum IPO1609]
gi|83725703|gb|EAP72845.1| FlgH [Ralstonia solanacearum UW551]
gi|206593116|emb|CAQ60022.1| flagellar l-ring protein precursor (basal body l-ring protein)
[Ralstonia solanacearum IPO1609]
Length = 244
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 24/243 (9%)
Query: 3 RYSFIVLC--YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
R + + S L C M + + P + +++
Sbjct: 17 RIVRLAVLGTASLLATACG--------------MLPPPEPIVQGPTTARPPMPVMAPRQN 62
Query: 61 YSLWR------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
++++ +F+D RA VGD +T+ I + A R+ S +
Sbjct: 63 GAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITENTAASKQTSGSVDRSGSKTTSVPT 122
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + ++ KG+ I V +L NGNL++SG ++
Sbjct: 123 FAGMNPGVLSLL--GVSASDANKFDSKGANGAQNNFTATITVTVVEVLSNGNLVVSGEKQ 180
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ V S+ +G+V P V+ N+V ++A+AR+ Y G G E + + +
Sbjct: 181 MAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADARMEYRGTGYVAEAQQMGWLSRFFLS 240
Query: 235 LSP 237
+SP
Sbjct: 241 VSP 243
>gi|221199742|ref|ZP_03572785.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD2M]
gi|221208653|ref|ZP_03581653.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD2]
gi|221215574|ref|ZP_03588537.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD1]
gi|221164562|gb|EED97045.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD1]
gi|221171464|gb|EEE03911.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD2]
gi|221179981|gb|EEE12385.1| flagellar L-ring protein FlgH [Burkholderia multivorans CGD2M]
Length = 229
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PREPIVQQPMTAQPPLPVSMQAPGSIFNPGYAGRPLFEDQRPRNIGDILTIVIAENINAT 89
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G + NL+ G + G S A N I
Sbjct: 90 KSSGANTNRQGNTDFNVPTAGFLGGLFSK---ANLSAAGTNKFAATGGASAANTFNGTIT 146
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 147 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGSNSVYSTQVADARIEYSA 206
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 207 KGYINEAETMGWLQRFFLNIAP 228
>gi|161526183|ref|YP_001581195.1| flagellar basal body L-ring protein [Burkholderia multivorans ATCC
17616]
gi|189349101|ref|YP_001944729.1| flagellar basal body L-ring protein [Burkholderia multivorans ATCC
17616]
gi|226701915|sp|A9ABN1|FLGH_BURM1 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|160343612|gb|ABX16698.1| flagellar L-ring protein [Burkholderia multivorans ATCC 17616]
gi|189333123|dbj|BAG42193.1| flagellar L-ring protein precursor [Burkholderia multivorans ATCC
17616]
Length = 229
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PREPIVQQPMTAQPPLPVSMQAPGSIFNPGYAGRPLFEDQRPRNIGDILTIVIAENINAT 89
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G + NL+ G + G S A N I
Sbjct: 90 KSSGANTNRQGNTDFNVPTAGFLGGLFSK---ANLSAAGTNKFAATGGASAANTFNGTIT 146
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 147 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGSNSVYSTQVADARIEYSA 206
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 207 KGYINEAETMGWLQRFFLNIAP 228
>gi|254251194|ref|ZP_04944512.1| hypothetical protein BDAG_00370 [Burkholderia dolosa AUO158]
gi|124893803|gb|EAY67683.1| hypothetical protein BDAG_00370 [Burkholderia dolosa AUO158]
Length = 238
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 39 PREPIIQQPMTAQPPLPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIVIAENINAT 98
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 99 KSSGANTNRQGNTDFNVPTAGFLGGLFAK---ANLSATGNNKFAATGGASAANTFNGTIT 155
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 156 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGSNSVYSTQVADARIEYSA 215
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 216 KGYINEAETMGWLQRFFLNIAP 237
>gi|227328341|ref|ZP_03832365.1| flagellar basal body L-ring protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 237
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 83/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R N+GD LT+ ++ + A +
Sbjct: 39 PTTAQPGSPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNIGDTLTIVLQENVSASKSSS 98
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN + ++ +LN G +G+G + + I V
Sbjct: 99 ANAARNGASTFGVTTVPRYLEGPLGNNRASLNATGTNDFTGQGGANANNTFSGTITVTVG 158
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 159 QVLANGNLQVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 218
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 219 NEAQNMGWLQRFFLNVSP 236
>gi|330719498|gb|EGG98114.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC2047]
Length = 188
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 3/187 (1%)
Query: 54 SDSTKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ ++++ + F D +A +VGDILT+++ A +T + + + +
Sbjct: 1 MPAPSSQGAIYQPTQRVSYFVDRKARHVGDILTINLVERTTASKKAETEIADSTAHNLAT 60
Query: 113 SGG-FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
F+ + + N G + +G ++ L+ I VT +L NG L + G
Sbjct: 61 PTLPFTDYTDKLKDYGLATNVAGDNSFTGDAESDQSNSLSGNITVTVTDVLPNGVLRVRG 120
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+ + +N + ++G+VR D+ N V K+A+ARI+Y G G P +
Sbjct: 121 EKWMTLNTGDEYIRISGMVRLDDIAPDNVVPSTKLADARITYSGTGTFANSNEPGWFSKF 180
Query: 232 IE-NLSP 237
+ P
Sbjct: 181 FFGQVWP 187
>gi|260866416|ref|YP_003232818.1| putative lateral flagellar protein of basal-body outer-membrane L
ring [Escherichia coli O111:H- str. 11128]
gi|257762772|dbj|BAI34267.1| predicted lateral flagellar protein of basal-body outer-membrane L
ring [Escherichia coli O111:H- str. 11128]
Length = 246
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 57 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 116
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ FS + + + D G + + L I V A+ N
Sbjct: 117 SNTVDIGAPTIFS-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 171
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 172 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 231
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 232 AGWLTRLFNHPLFPI 246
>gi|167813805|ref|ZP_02445485.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 91]
Length = 209
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 87/227 (38%), Gaps = 21/227 (9%)
Query: 13 SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AA 70
L GC E + + + S++ +
Sbjct: 1 LALAGCA----------------QIPREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRP 44
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
LF+D R NVGDILT+ I + A + +R + + L G NL
Sbjct: 45 LFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANL 101
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ G + G S A N I VT +L NGNL++SG +++ +N + +GIV
Sbjct: 102 SAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIV 161
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P + NSV ++A+ARI Y KG E + N++P
Sbjct: 162 NPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAP 208
>gi|94495408|ref|ZP_01301988.1| flagellar L-ring protein precursor [Sphingomonas sp. SKA58]
gi|94424796|gb|EAT09817.1| flagellar L-ring protein precursor [Sphingomonas sp. SKA58]
Length = 226
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
E R F + + S+++ + L +RA VGDI+T+ + QA
Sbjct: 29 EVEREYFAPTVIAQPAAPAANGSIFQTSVGYTPLTSGARATTVGDIITIVLVERTQASKS 88
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
N SR+ S L +P ++ G +GKG+ +++ L+ I
Sbjct: 89 NSADTSRSGSFGLTPPSTGVLSKLFSPS---DVAMGGNNGFTGKGAATQSNALSGEITVT 145
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
+ + NG +++ G + + +N + ++G+VR D+ N ++ ++A+A+I Y GKG
Sbjct: 146 IAQVYPNGTMLVKGEKALTLNRGDEFIQISGLVRQADISPDNRIASTRVADAKIIYKGKG 205
Query: 218 RTTELLRPPIGHQLIENLSP 237
R + +SP
Sbjct: 206 EIANASRQGWLQRFFSAISP 225
>gi|300693341|ref|YP_003749314.1| flagellar protein of basal-body outer-membrane l ring [Ralstonia
solanacearum PSI07]
gi|299075378|emb|CBJ34673.1| flagellar protein of basal-body outer-membrane L ring [Ralstonia
solanacearum PSI07]
Length = 244
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 8/210 (3%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR------DSHAALFKDSRALNVGDILTVD 87
M + + P + +++ ++++ +F+D RA VGD +T+
Sbjct: 36 MLPPPEPIVQGPTSARPPMPVMAQRQNGAIYQEVASGSGGFRGMFEDRRAHMVGDTITIV 95
Query: 88 IRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRA 147
I + A R+ S + + + ++ KG+
Sbjct: 96 ITENTAASKQTSGTVDRSGSKTTSVPTFAGMNPGVLSLL--GVSASDANKFDSKGANGAQ 153
Query: 148 EKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIA 207
I V +L NGNL++SG +++ V S+ +G+V P V+ N+V ++A
Sbjct: 154 NNFTATITVTVVEVLSNGNLVVSGEKQMAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVA 213
Query: 208 EARISYGGKGRTTELLRPPIGHQLIENLSP 237
+AR+ Y G G E + + +SP
Sbjct: 214 DARMEYRGTGYVAEAQQMGWLSRFFLTVSP 243
>gi|126452858|ref|YP_001064567.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
1106a]
gi|242316923|ref|ZP_04815939.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1106b]
gi|126226500|gb|ABN90040.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1106a]
gi|242140162|gb|EES26564.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1106b]
Length = 240
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 41 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 100
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 101 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 157
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 158 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 217
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 218 KGYINEAETMGWLQRFFLNIAP 239
>gi|30248325|ref|NP_840395.1| flagellar basal body L-ring protein [Nitrosomonas europaea ATCC
19718]
gi|30138211|emb|CAD84219.1| Flagellar L-ring protein [Nitrosomonas europaea ATCC 19718]
Length = 264
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+++ ++ GC + + M D ++ S +++
Sbjct: 41 VLIVMICVVSGCA--------------ITPTPKVQQPMSVRPPDLPVIPPSQTSGGIYQA 86
Query: 67 --------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ LF+D RA ++GD + V + A + R + + L
Sbjct: 87 VFDYQGRGRYIPLFEDRRARSIGDTIIVALNEKTNASKKTGSNAQRAGEIGLSVPSFLGL 146
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ Q + +L GKG S IA V IL NGNL++SG +++ +N
Sbjct: 147 PFKSIFQ-DLDLEATSSNKFDGKGESSSNNNFTGTIAVTVLDILPNGNLLVSGEKQIGIN 205
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++G V +N+VS ++A+ARI Y G G E+ + ++SP
Sbjct: 206 QGHEFIRLSG-VINPINIINNTVSSIQVADARIEYRGNGYLDEVQTMGWLSRFFLSISP 263
>gi|227112524|ref|ZP_03826180.1| flagellar basal body L-ring protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 237
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 82/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R NVGD LT+ ++ + A +
Sbjct: 39 PTTAQPGSPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNVGDTLTIVLQENVSASKSSS 98
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN S + +LN G +G+G + + I V
Sbjct: 99 ANAARNGSSTFGATVVPRYLDGPLGNNRASLNATGTNDFTGQGGANANNTFSGTITVTVG 158
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 159 QVLANGNLQVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 218
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 219 NEAQNMGWLQRFFLNVSP 236
>gi|83944160|ref|ZP_00956616.1| Flagellar L-ring protein flgH [Sulfitobacter sp. EE-36]
gi|83955140|ref|ZP_00963796.1| flagellar L-ring protein precursor [Sulfitobacter sp. NAS-14.1]
gi|83840469|gb|EAP79642.1| flagellar L-ring protein precursor [Sulfitobacter sp. NAS-14.1]
gi|83845027|gb|EAP82908.1| Flagellar L-ring protein flgH [Sulfitobacter sp. EE-36]
Length = 245
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Query: 24 EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDI 83
+SP +P SLW +S LF+D RA +VGD+
Sbjct: 33 PTVSDLTLSPDHMGEVNRVSIPMPLPKAPEQPKRADQASLWSNSTPRLFQDRRAGDVGDL 92
Query: 84 LTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGS 143
+TV I IDD+A N TGRSR++S + + + +S G+GS
Sbjct: 93 VTVLIDIDDRAQLQNATGRSRSSSTGVDDPDILNF--DTSTDSGQLIGLSSSSSSEGEGS 150
Query: 144 ISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSY 203
I R E + L +AA+V L NGN +I+G QEV+VN+E+R L + GI+R D++ N++ Y
Sbjct: 151 IRRNETIRLRVAALVIQTLPNGNFVIAGRQEVKVNNELRELRIAGIIRQSDINVGNTIDY 210
Query: 204 DKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
DKIAEARI+YGG+G+ + + G +E P
Sbjct: 211 DKIAEARITYGGRGQISTVQTARYGQDALEVFLP 244
>gi|323697474|ref|ZP_08109386.1| flagellar L-ring protein [Desulfovibrio sp. ND132]
gi|323457406|gb|EGB13271.1| flagellar L-ring protein [Desulfovibrio desulfuricans ND132]
Length = 231
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 25/246 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M RY +V+ L GC +P ++P ++ D
Sbjct: 1 MRRYFLMVMAAILLASGCARKYENE-PMPVLTP---------------PAYEEQDPASNP 44
Query: 61 YSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS------ 113
SL+ + + L+ D+RA VGDI+ V + ++T ++N + +S
Sbjct: 45 GSLYDTNRSEFLYDDNRASRVGDIVLVQVAETATTKIKSETTADKSNDVDTSVSAMPTTG 104
Query: 114 --GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
G L + + + SG G + +A + L L + G
Sbjct: 105 IVGNVPLAETLGAKAGVGILANQSSKFSGTGETKQESNFEATVATRIVRRLPGNILQVEG 164
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
++ +RVN+E + L V G++R +D+ + N++ +AEA+I G+G + +P ++
Sbjct: 165 ARRIRVNNETQFLVVRGLIRERDISSSNTIPSTSLAEAQIEIYGQGVLADKQKPGWLSRI 224
Query: 232 IENLSP 237
++N+ P
Sbjct: 225 LDNVFP 230
>gi|283784087|ref|YP_003363952.1| lateral flagellar L-ring protein [Citrobacter rodentium ICC168]
gi|282947541|emb|CBG87094.1| lateral flagellar L-ring protein [Citrobacter rodentium ICC168]
Length = 221
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++ + +L D RA VGDILTV + Q+ +T +NN++ F
Sbjct: 46 AGGVFETGYNWSLTADRRAYRVGDILTVLLEESTQSSKQAKTNFGKNNTVDIGAPTFFG- 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ N + + D G + + L I V ++ NG L I G + + +N
Sbjct: 105 ----HTKKNLSGSIDANRDFDGSATSQQQNSLRGEITVSVHSVQPNGILEIRGEKWLTLN 160
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ ++G+VR D+ NSVS +IA+ARISY G+G ++ +L + L P
Sbjct: 161 QGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFP 220
Query: 238 L 238
+
Sbjct: 221 I 221
>gi|300716221|ref|YP_003741024.1| flagellar L-ring protein [Erwinia billingiae Eb661]
gi|299062057|emb|CAX59173.1| Flagellar L-ring protein [Erwinia billingiae Eb661]
Length = 232
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 7/206 (3%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRD------SHAALFKDSRALNVGDILTVDIRID 91
+ + S+++ + LF+D R N+GD LT+ ++ +
Sbjct: 27 PRTPLVEGSTTAQPLPASPPVVNGSIFQGLMPMNYGYQPLFEDRRPRNIGDTLTITLQEN 86
Query: 92 DQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
A + R+ S L+ SL G N++ G +GKG +
Sbjct: 87 VSASKSSTASAGRDGSTTLGLTVPSSLTGLLGGD-KTNIDASGKNDFAGKGGATANNTFT 145
Query: 152 LLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARI 211
I V +L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI
Sbjct: 146 GTITVTVNQVLPNGNLKVVGEKQIEINQGTEFIRFSGVVNPRTISGSNAVVSTQVADARI 205
Query: 212 SYGGKGRTTELLRPPIGHQLIENLSP 237
Y G G E + NLSP
Sbjct: 206 EYVGNGYINEAQTMGWLQRFFLNLSP 231
>gi|170694395|ref|ZP_02885549.1| flagellar L-ring protein [Burkholderia graminis C4D1M]
gi|170140818|gb|EDT08992.1| flagellar L-ring protein [Burkholderia graminis C4D1M]
Length = 232
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 21/235 (8%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + L + L GC + P + S S++
Sbjct: 16 ALVQLTLLAALGGCG-----------LVPKQPITQQPMTAMPPMPPQAQSP-----GSIY 59
Query: 65 RDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ LF+D R NVGDILT+ I+ + A + G +RN + + L G
Sbjct: 60 NPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGAGVNRNGTTSFDVPTAGFLGGLF 119
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
NL+ G + G + + N I VT +L NGNL++SG +++ +N
Sbjct: 120 GK---ANLSASGANKFTSTGGANASNTFNGTITVTVTGVLPNGNLMVSGEKQMLINQGNE 176
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P + N+V ++A+A+I Y KG E + N+SP
Sbjct: 177 FVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYVDEAENMGWLQRFFLNVSP 231
>gi|15616949|ref|NP_240162.1| flagellar basal body L-ring protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681702|ref|YP_002468088.1| flagellar L-ring protein precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682257|ref|YP_002468641.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471398|ref|ZP_05635397.1| flagellar basal body L-ring protein [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386810|sp|P57425|FLGH_BUCAI RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789278|sp|B8D9C9|FLGH_BUCA5 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789279|sp|B8D7N1|FLGH_BUCAT RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|25373418|pir||H84969 flagellar L-ring protein precursor [imported] - Buchnera sp.
(strain APS)
gi|10039014|dbj|BAB13048.1| flagellar L-ring protein precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621990|gb|ACL30146.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624545|gb|ACL30700.1| flagellar L-ring protein precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086080|gb|ADP66162.1| flagellar basal body L-ring protein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086652|gb|ADP66733.1| flagellar basal body L-ring protein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087238|gb|ADP67318.1| flagellar basal body L-ring protein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 238
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 26/246 (10%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ ++ + + C S + P+ + N + S
Sbjct: 9 KKYYLTAIFLLTIQSCASV--------EYKPLVTGATTA--------IAPNIWPKVVNGS 52
Query: 63 LWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
L+++ + LF+D R N+GD +TV ++ + A + + SR+ S + L
Sbjct: 53 LFQEKIPINYGYQPLFEDHRPHNIGDTITVVLQENISASNSSISNMSRDGSANFGLKIAP 112
Query: 117 SLFGQQTP----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+L+ G SGKGS S K LI V +L NGNL + G
Sbjct: 113 GQLNNILGVNFQDNTTSLDSFGRNNFSGKGSNSANNKFTGLITVTVKRVLPNGNLKVIGE 172
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
++V +N + +G++ P +++ +N +S +IA+ARI Y G ++ + +L+
Sbjct: 173 KQVSINKGTEFIRFSGVINPTNINKNNFISSTQIADARIEYLSHGGLDDVQKMGWLQKLL 232
Query: 233 ENLSPL 238
+SP+
Sbjct: 233 LKISPI 238
>gi|239907790|ref|YP_002954531.1| flagellar L-ring protein [Desulfovibrio magneticus RS-1]
gi|239797656|dbj|BAH76645.1| flagellar L-ring protein [Desulfovibrio magneticus RS-1]
Length = 241
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 33/255 (12%)
Query: 1 MYRYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R I L ++ + GC + + PQM+P + P
Sbjct: 1 MRRTPLIPLALIAAAVVGCAPATKQAAPAPQMTPPVAKAPPPADNP-------------- 46
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS----- 113
S++ S LF D+RA +GDILTV+I ++ +T R S +
Sbjct: 47 -GSIYSQSQPTFLFDDTRARRIGDILTVNIVDTSKSDLKAETKNDRTASNELGVQNYFSN 105
Query: 114 -----------GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
GG + + + + KG R + I A + IL
Sbjct: 106 KNVAGNLSGQLGGPNFGMNGLIGSDPIVKTNTAQKFQSKGETKRESAVTASIGARIVNIL 165
Query: 163 ENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTEL 222
G + + G+++ RVNDE + + + G+VRP D+ +N+V +A+ +I Y G+G +
Sbjct: 166 PGGVMQVEGARQTRVNDENQIIVIKGLVRPIDIGPNNTVLSTMLADCQIEYYGEGDLADR 225
Query: 223 LRPPIGHQLIENLSP 237
+ ++++N+ P
Sbjct: 226 QKSGWLTRILDNVWP 240
>gi|148976397|ref|ZP_01813103.1| flagellar L-ring protein precursor H [Vibrionales bacterium SWAT-3]
gi|145964220|gb|EDK29476.1| flagellar L-ring protein precursor H [Vibrionales bacterium SWAT-3]
Length = 258
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRAL 78
I G P +P+ + + SL+ +H +++ DS+
Sbjct: 55 GRTDPIAGDPAWAPINPKQKPEHYA-------------AATGSLFNVNHIGSMYDDSKPR 101
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + + +A S++N + + N + +
Sbjct: 102 GIGDIITVALDENTRATKKANADMSKSNDASMEPLAVGGQELT-IDKYNFSYDLSNTNTF 160
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G S +++ ++ I V +L NGNL++ G + + +N + ++G +RP D+D
Sbjct: 161 AGDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFD 220
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N+++ ++++ ARI Y G G ++ P +
Sbjct: 221 NTIASNRVSNARIQYSGTGVQQDMQEPGFLARFFNV 256
>gi|300817267|ref|ZP_07097485.1| flagellar L-ring protein FlgH [Escherichia coli MS 107-1]
gi|300530243|gb|EFK51305.1| flagellar L-ring protein FlgH [Escherichia coli MS 107-1]
Length = 221
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 92 SNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+ R D+ NSVS +IA+ARISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLARADDIQNDNSVSSQRIADARISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|153840133|ref|ZP_01992800.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
gi|149746241|gb|EDM57331.1| flagellar L-ring protein FlgH [Vibrio parahaemolyticus AQ3810]
Length = 186
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 52 KNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
K + SL+ H L+ DS+ +GDI+TV + A S+ N
Sbjct: 1 KPEHYAAATGSLFSPEHITDLYDDSKPRGIGDIITVTLDETTSATKSANADLSKTNEAQM 60
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + N + + + +G S ++ ++ I V +L NGNL+I
Sbjct: 61 DPLQVGGEELKVGGKYNFSYDLNNTNTFAGDSSAKQSNSISGYITVEVIEVLANGNLVIR 120
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G + + +N + ++G +RP D++ N+++ ++++ ARI Y G G + ++ P +
Sbjct: 121 GEKWMTLNTGDEYIRLSGTIRPDDINFDNTIASNRVSNARIQYSGTGLSQDMQEPGFLAR 180
Query: 231 LIEN 234
Sbjct: 181 FFNV 184
>gi|149908756|ref|ZP_01897417.1| flagellar L-ring protein precursor [Moritella sp. PE36]
gi|149808298|gb|EDM68237.1| flagellar L-ring protein precursor [Moritella sp. PE36]
Length = 229
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 12/237 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L +LL GC + + E + ++ +T
Sbjct: 1 MLAKWLVKLSVCALLGGCADNAYNVLEA------KPGEAEWSPTITTKPIVRSDTTTLGD 54
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL +S +F+D RA VGDILTV + Q+ +G +N+ + S F
Sbjct: 55 GSLLANSSLLNMFQDRRAYKVGDILTVILEEQTQSSKRANSGIKKNSKGGGNYTSNLSSF 114
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G+ + + +G G+ S+ L+ I V IL G L I G + +++N
Sbjct: 115 -----DATGSFSLGSDRSFNGGGTSSQQNALSGAITVTVAEILPTGALRIRGEKWIKLNQ 169
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ +TG+VR D+D N +S ++A+A I+Y G+G E + + I +
Sbjct: 170 GDEYIRLTGLVRVDDIDKSNRISSRRLADANITYAGRGELAESNQQGWFTRFINSKW 226
>gi|195953749|ref|YP_002122039.1| flagellar L-ring protein [Hydrogenobaculum sp. Y04AAS1]
gi|195933361|gb|ACG58061.1| flagellar L-ring protein [Hydrogenobaculum sp. Y04AAS1]
Length = 224
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 26/241 (10%)
Query: 2 YRYSFIVL---CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
++ F+ S LL C S+ + +P +P +
Sbjct: 4 KKFVFLAFNVTMLSLLLNSCASTPHHLKYLPYSTPSQN-------------------LNY 44
Query: 59 KSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
SL+ A L+ D RA VGD++ + + AV R+++ + +S F
Sbjct: 45 VKGSLYVPDSPMANLYSDQRAFAVGDLVHILVSESVNAVESISNQTQRSSTFNDAVSSFF 104
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
L + + + + G S ++ I A V + NGNL+I G + +
Sbjct: 105 GLPSSTLRNLGVGASSNNQQKAQGTES--QSGVFTTTITAYVKRVYPNGNLLIEGHKIIY 162
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N+ R + + GIVRPQD+D ++V IA I Y G G +P + + +
Sbjct: 163 LNNVERVITLRGIVRPQDIDNTDTVPSQDIANLEILYQGHGYLVNGSQPGWLARFLAKIL 222
Query: 237 P 237
P
Sbjct: 223 P 223
>gi|330818582|ref|YP_004362287.1| flagellar L-ring protein FlgH [Burkholderia gladioli BSR3]
gi|327370975|gb|AEA62331.1| flagellar L-ring protein FlgH [Burkholderia gladioli BSR3]
Length = 232
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
+ P + + S++ + LF+D R N+GDILT+ I + A
Sbjct: 33 PHQPITQQPMTAVPPVPPQ-MQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENVNA 91
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R S + L G NL+ G + G + A + I
Sbjct: 92 TKTSGANANRGGSTDFNVPTAGFLGGLFNK---ANLSASGSNKFTATGGATAANTFSGTI 148
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 149 TVTVTNVLPNGNLMVSGEKQMLINQGNEFVRFSGVVNPNSISGANSVYSTQVADARIEYS 208
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 209 AKGYINEAETMGWLQRFFLNVAP 231
>gi|294140188|ref|YP_003556166.1| flagellar L-ring protein FlgH [Shewanella violacea DSS12]
gi|293326657|dbj|BAJ01388.1| flagellar L-ring protein FlgH [Shewanella violacea DSS12]
Length = 228
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 5/208 (2%)
Query: 32 SPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRI 90
S D+ P + + S+++ S A+ L+ D +AL VGDI+TV +
Sbjct: 23 SAHKPIPDDPYYAPVYP--EAPATKIVATGSMYQASQASSLYSDIKALKVGDIITVILME 80
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
QA + L +L Y + + ++ L
Sbjct: 81 QTQAKKSASNEIKKGTDLTLD-PIYVGSGNISISGQALDLRYKDSMNTKRESDADQSNSL 139
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
+ I+A V +L NGNL+I G + + +N+ + +TG+VR QD+ N++ ++A AR
Sbjct: 140 SGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRLTGLVRSQDIRPDNTIDSTRVANAR 199
Query: 211 ISYGGKGRTTELLRPPIGHQLIE-NLSP 237
I Y G G ++ + + P
Sbjct: 200 IQYSGTGTFADVQKVGWLSSFFMGSWWP 227
>gi|260772277|ref|ZP_05881193.1| flagellar L-ring protein FlgH [Vibrio metschnikovii CIP 69.14]
gi|260611416|gb|EEX36619.1| flagellar L-ring protein FlgH [Vibrio metschnikovii CIP 69.14]
Length = 260
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 90/260 (34%), Gaps = 28/260 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEI----------------------TGIPQMSPMGSSL 38
M + L + +LL GC + + + + +
Sbjct: 1 MMKRIL-SLAFVALLSGCSLLPAPLETADVVQGTTVVDAVEGDRSSDGSTGLLDTLRNRN 59
Query: 39 DENNRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQA 94
D P + ++ SL+ +L+ D++ +GDI+TV + + +A
Sbjct: 60 DPVAGDPAWAPIHPKAKPEHYAAETGSLFNLARAVSLYSDAKPRGIGDIITVTLNENTKA 119
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
++NN N + SG ++ L I
Sbjct: 120 TKSADAKLTKNNDASMDPLSVGGQELT-IGDYNFSYALKNNNQFSGSAQANQNNNLQGSI 178
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
V +L NGNL++ G + + +N + ++G VRP D+ N+++ ++I+ RI Y
Sbjct: 179 TVEVIDVLSNGNLVVRGEKWLMLNTGDEYIRLSGTVRPDDIGYDNTIASNRISNTRIQYS 238
Query: 215 GKGRTTELLRPPIGHQLIEN 234
G ++ P +
Sbjct: 239 STGSNQDMQEPGFLARFFNV 258
>gi|171059409|ref|YP_001791758.1| flagellar L-ring protein [Leptothrix cholodnii SP-6]
gi|170776854|gb|ACB34993.1| flagellar L-ring protein [Leptothrix cholodnii SP-6]
Length = 233
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 25/248 (10%)
Query: 1 MYRYSF---------IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDF 51
M R +++ ++LL C + P + +D P
Sbjct: 1 MNRLVTRIGRSARLALLVGSAALLGAC-----------NLMPTVAKVD--VAEPTSARPV 47
Query: 52 KNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ S+++ + LF+D RA VGD LTV I A + + ++ S+
Sbjct: 48 AVVTPGVSNGSIFQAGAYRPLFEDHRARLVGDTLTVQIVEKVSASAKSTSTVEKSGSVDA 107
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
L+ ++ + +GKG + + + I V +L NG+L+I+
Sbjct: 108 SLTALPYQGVAALGKL--GVGGSSTNKFAGKGGTENSNEFSGTITTTVIEVLPNGHLLIA 165
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G +++ VND L +G V P+ + NSV+ +IA R+ G+G + + +
Sbjct: 166 GEKQIGVNDNADVLRFSGQVDPRSIQPGNSVASAQIANVRVEQRGRGGGADAQKIGWLGR 225
Query: 231 LIENLSPL 238
NL P+
Sbjct: 226 FFLNLLPI 233
>gi|88911316|sp|Q82XG6|FLGH_NITEU RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 234
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+++ ++ GC + + M D ++ S +++
Sbjct: 11 VLIVMICVVSGCA--------------ITPTPKVQQPMSVRPPDLPVIPPSQTSGGIYQA 56
Query: 67 --------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ LF+D RA ++GD + V + A + R + + L
Sbjct: 57 VFDYQGRGRYIPLFEDRRARSIGDTIIVALNEKTNASKKTGSNAQRAGEIGLSVPSFLGL 116
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ Q + +L GKG S IA V IL NGNL++SG +++ +N
Sbjct: 117 PFKSIFQ-DLDLEATSSNKFDGKGESSSNNNFTGTIAVTVLDILPNGNLLVSGEKQIGIN 175
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++G V +N+VS ++A+ARI Y G G E+ + ++SP
Sbjct: 176 QGHEFIRLSG-VINPINIINNTVSSIQVADARIEYRGNGYLDEVQTMGWLSRFFLSISP 233
>gi|115311514|sp|Q6D6H3|FLGH_ERWCT RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
Length = 237
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 82/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R N+GD LT+ ++ + A +
Sbjct: 39 PTTAQPGSPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNIGDTLTIVLQENVSASKSSS 98
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN S ++ L+ G SGKG + + I V
Sbjct: 99 ANAARNGSSTFGVATTPRYLEGPLGNNRAALDATGTNDFSGKGGANANNTFSGTITVTVG 158
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 159 QVLANGNLNVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 218
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 219 NEAQNMGWLQRFFLNVSP 236
>gi|187478188|ref|YP_786212.1| flagellar basal body L-ring protein [Bordetella avium 197N]
gi|115422774|emb|CAJ49302.1| flagellar L-ring protein [Bordetella avium 197N]
Length = 229
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 18/236 (7%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ L GC + + + + + S++
Sbjct: 8 RLMSGLLLILSAGCA--------------LIPPEPVVIGPTTAAPPMPAAPAGRPNGSIY 53
Query: 65 RD---SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ + LF+D R NVGDI+TV + A T SR+ ++
Sbjct: 54 QPTAYGNYPLFEDRRPRNVGDIVTVMLEEKTNAAKGVATNTSRSGGAKLGVAAAPKFMDG 113
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ + G + G G+ S I V +L NGNL I+G +++ +N
Sbjct: 114 VVNN-KLDTDITGDNTAKGTGNSSANNSFTGSITTTVVGVLPNGNLQIAGEKQIAINRGS 172
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++G+V P+ + NSVS ++A+ARI Y KG E+ + SP
Sbjct: 173 EYVRLSGVVDPRSITGTNSVSSTRVADARIEYRSKGVMDEVQTMGWLQRFFLIASP 228
>gi|53717917|ref|YP_106903.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
K96243]
gi|126440336|ref|YP_001057325.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 668]
gi|237810464|ref|YP_002894915.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei MSHR346]
gi|254182137|ref|ZP_04888734.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1655]
gi|81380628|sp|Q63YB2|FLGH_BURPS RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|52208331|emb|CAH34264.1| flagellar L-ring protein precursor [Burkholderia pseudomallei
K96243]
gi|126219829|gb|ABN83335.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 668]
gi|184212675|gb|EDU09718.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1655]
gi|237503889|gb|ACQ96207.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 41 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 100
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 101 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 157
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 158 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 217
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 218 KGYINEAETMGWLQRFFLNIAP 239
>gi|121599856|ref|YP_994294.1| flagellar basal body L-ring protein [Burkholderia mallei SAVP1]
gi|162210053|ref|YP_331882.2| flagellar basal body L-ring protein [Burkholderia pseudomallei
1710b]
gi|167001540|ref|ZP_02267335.1| flagellar L-ring protein FlgH [Burkholderia mallei PRL-20]
gi|217424924|ref|ZP_03456420.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 576]
gi|226199862|ref|ZP_03795413.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei Pakistan
9]
gi|254175119|ref|ZP_04881780.1| flagellar L-ring protein FlgH [Burkholderia mallei ATCC 10399]
gi|254196301|ref|ZP_04902725.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei S13]
gi|254259034|ref|ZP_04950088.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1710a]
gi|254295817|ref|ZP_04963274.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 406e]
gi|254359735|ref|ZP_04976006.1| flagellar L-ring protein FlgH [Burkholderia mallei 2002721280]
gi|121228666|gb|ABM51184.1| flagellar L-ring protein FlgH [Burkholderia mallei SAVP1]
gi|148028949|gb|EDK86881.1| flagellar L-ring protein FlgH [Burkholderia mallei 2002721280]
gi|157805743|gb|EDO82913.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 406e]
gi|160696164|gb|EDP86134.1| flagellar L-ring protein FlgH [Burkholderia mallei ATCC 10399]
gi|169653044|gb|EDS85737.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei S13]
gi|217391944|gb|EEC31970.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 576]
gi|225928213|gb|EEH24249.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei Pakistan
9]
gi|243062741|gb|EES44927.1| flagellar L-ring protein FlgH [Burkholderia mallei PRL-20]
gi|254217723|gb|EET07107.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1710a]
Length = 240
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 41 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 100
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 101 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 157
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 158 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 217
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 218 KGYINEAETMGWLQRFFLNIAP 239
>gi|124385970|ref|YP_001028057.1| flagellar basal body L-ring protein [Burkholderia mallei NCTC
10229]
gi|126448432|ref|YP_001082864.1| flagellar basal body L-ring protein [Burkholderia mallei NCTC
10247]
gi|124293990|gb|ABN03259.1| flagellar L-ring protein FlgH [Burkholderia mallei NCTC 10229]
gi|126241302|gb|ABO04395.1| flagellar L-ring protein FlgH [Burkholderia mallei NCTC 10247]
Length = 238
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 39 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 98
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 99 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 155
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 156 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 215
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 216 KGYINEAETMGWLQRFFLNIAP 237
>gi|283834452|ref|ZP_06354193.1| flagellar L-ring protein FlgH [Citrobacter youngae ATCC 29220]
gi|291069999|gb|EFE08108.1| flagellar L-ring protein FlgH [Citrobacter youngae ATCC 29220]
Length = 248
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 59 APPKTEAPPTADGRAGGVFETGYNWSLTADRRAYRVGDILTVMLEESTQSSKQAKTNFGK 118
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
NN++ F + N + + D +G + + L I V ++ N
Sbjct: 119 NNTVDIGAPTLFG-----HTKDNLSASVDANRDFNGTATSQQQNSLRGEITVSVHSVQSN 173
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY G+G ++
Sbjct: 174 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANA 233
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 234 AGWLTRLFNHPLFPI 248
>gi|50120642|ref|YP_049809.1| flagellar basal body L-ring protein [Pectobacterium atrosepticum
SCRI1043]
gi|49611168|emb|CAG74614.1| flagellar L-ring protein [Pectobacterium atrosepticum SCRI1043]
Length = 239
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 82/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R N+GD LT+ ++ + A +
Sbjct: 41 PTTAQPGSPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNIGDTLTIVLQENVSASKSSS 100
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN S ++ L+ G SGKG + + I V
Sbjct: 101 ANAARNGSSTFGVATTPRYLEGPLGNNRAALDATGTNDFSGKGGANANNTFSGTITVTVG 160
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 161 QVLANGNLNVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 220
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 221 NEAQNMGWLQRFFLNVSP 238
>gi|134283676|ref|ZP_01770375.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 305]
gi|134245085|gb|EBA45180.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 305]
Length = 232
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 33 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 92
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 93 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 149
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 150 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 209
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 210 KGYINEAETMGWLQRFFLNIAP 231
>gi|144224|gb|AAA23035.1| basal body L-ring protein precursor [Caulobacter vibrioides]
Length = 242
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 8/225 (3%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRA 77
S++ E P ++P+G + + L F D RA
Sbjct: 19 CSTVKEAVKGPDLAPVGYPAPLAPMQQQYVSAREPAPQRF--GQLAVAGRGPAFFNDQRA 76
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNY----- 132
VGDI+TV I IDD A T SR ++ + + + G +
Sbjct: 77 SRVGDIVTVMIDIDDSARTKKPTNSSRTANMKAGVRHLLGMESSLGKFLPGGFDPASALE 136
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
++ SR+EK++L IAA+V+ +L NGN++I G+QEVR N E+R L V GIVRP
Sbjct: 137 TNSTTTNAGSGGSRSEKISLTIAAVVSQLLPNGNMVIQGTQEVRTNAELRQLTVAGIVRP 196
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+D+ + N++ + +IAEARISYGG+G + + + P G L+E SP
Sbjct: 197 EDISSANTIRHTQIAEARISYGGRGDISRVQKTPAGQSLVEKFSP 241
>gi|83718865|ref|YP_440804.1| flagellar basal body L-ring protein [Burkholderia thailandensis
E264]
gi|257140545|ref|ZP_05588807.1| flagellar basal body L-ring protein [Burkholderia thailandensis
E264]
gi|83652690|gb|ABC36753.1| flagellar L-ring protein FlgH [Burkholderia thailandensis E264]
Length = 240
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 41 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 100
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 101 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 157
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 158 VTVTNVLPNGNLVVSGQKQMLINQGNEFVRFSGVVNPNTISGQNSVYSTQVADARIEYSA 217
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 218 KGYINEAETMGWLQRFFLNIAP 239
>gi|315125987|ref|YP_004067990.1| lateral flagellar L-ring protein, LfgH [Pseudoalteromonas sp.
SM9913]
gi|315014501|gb|ADT67839.1| lateral flagellar L-ring protein, LfgH [Pseudoalteromonas sp.
SM9913]
Length = 240
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 12/229 (5%)
Query: 15 LFGCHSSISEITGI------PQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ GC ++ S+ + ++ ++ ++ + + D ++ SL++D++
Sbjct: 14 VAGCSNTPSKTQMVECEVVYGEVKCPQNTTQKSVQDYEISQDAYAQGLNQQDGSLFQDNY 73
Query: 69 A-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
+L+ D RA VGDILTV + Q+ + ++ L + +
Sbjct: 74 MFSLYADKRAYRVGDILTVVLNERTQSSKSADSSLDKSTDLDVSVPV-----AGALNVAD 128
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
NL G+ S S+ L+ I V +L NG+L+I G +++++N + +
Sbjct: 129 FNLGIGSSAKFDGESSASQQNFLSGAITVRVNHVLSNGSLVIKGRKQIKLNQGDEYIEIE 188
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
G+VRP D+D N VS +IAEA+ISY GKG + RP L
Sbjct: 189 GLVRPGDIDVSNRVSSLRIAEAQISYTGKGTLADANRPGWFTTLFTRFL 237
>gi|224825167|ref|ZP_03698273.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
gi|224602838|gb|EEG09015.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
Length = 227
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 21/242 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ + L GC + P + +
Sbjct: 1 MKAIFGVMAMLAVALSGCAV----------------PEPPIVQQPMSARPQPAPQALPGN 44
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S+++ + +F D VGD LTV I QT R +SL + G L
Sbjct: 45 GSIFQAGSYQPIFADRVPARVGDTLTVTIEEKTTTAASEQTTGKRTSSLSNSMGAGLQLP 104
Query: 120 GQQT----PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+L+ DG S GKG+ + I V +L NGNL++SG ++V
Sbjct: 105 FVPDYLEKKLAGASLSADGSATSGGKGTNQASSSFVSSITVTVIDVLANGNLMVSGEKQV 164
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
R+N + + ++G+V P+D+ N+VS K+A+ARI KG P + +
Sbjct: 165 RLNGDTEYIRLSGVVNPRDIKTGNTVSSTKVADARIEQQSKGNNRSFAEPGWLTKFFMTV 224
Query: 236 SP 237
P
Sbjct: 225 LP 226
>gi|84388094|ref|ZP_00990990.1| flagellar L-ring protein precursor [Vibrio splendidus 12B01]
gi|84377161|gb|EAP94031.1| flagellar L-ring protein precursor [Vibrio splendidus 12B01]
Length = 258
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRAL 78
+ G P +P+ + + SL+ +H +++ DS+
Sbjct: 55 GRTDPVAGDPAWAPINPKEKPEHYA-------------AATGSLFNVNHIGSMYDDSKPR 101
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + + +A S++N + + N + +
Sbjct: 102 GIGDIITVALDENTRATKKANADMSKSNDASMEPLAVGGQELT-IDKYNFSYDLSNTNTF 160
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G S +++ ++ I V +L NGNL++ G + + +N + ++G +RP D+D
Sbjct: 161 AGDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFE 220
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
N+++ ++++ ARI Y G G ++ P +
Sbjct: 221 NTIASNRVSNARIQYSGTGVQKDMQEPGFLARFFNV 256
>gi|261821156|ref|YP_003259262.1| flagellar basal body L-ring protein [Pectobacterium wasabiae
WPP163]
gi|261605169|gb|ACX87655.1| flagellar L-ring protein [Pectobacterium wasabiae WPP163]
Length = 237
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 83/198 (41%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
P + + S ++ + +F+D R N+GD LT+ ++ + A +
Sbjct: 39 PTTAQPGSPVLAGPNGSIFQTVQPMNYGYQPMFEDRRPRNIGDTLTIVLQENVSASKSSS 98
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVT 159
+RN + ++ +LN G +G+G + + I V
Sbjct: 99 ANAARNGASTFGVTATPRYLEGPLGNNRASLNATGTNDFTGQGGANANNTFSGTITVTVG 158
Query: 160 AILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT 219
+L NGNL + G +++ +N + +G+V P+ + +NSV ++A+ARI Y G G
Sbjct: 159 QVLANGNLNVVGEKQIAINQGTEFIRFSGVVNPRTISGNNSVPSTQVADARIEYVGNGYI 218
Query: 220 TELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 219 NEAQNMGWLQRFFLNVSP 236
>gi|327478812|gb|AEA82122.1| flagellar basal body L-ring protein [Pseudomonas stutzeri DSM 4166]
Length = 222
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 7/203 (3%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVF 96
L + + + ++ S L+R + +L D RA+ VGDILT+ + Q+
Sbjct: 25 LPDEDSSEYEPLELDYSLPPTTGGGLFRSGYGGSLVSDKRAVRVGDILTIVLDESTQSSK 84
Query: 97 DNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
T + +S+ + + SG S+ L IA
Sbjct: 85 SAGTSFGKQSSIGVGVPTVLGKTYP-----DVETAASAERDFSGSAKSSQQNTLRGSIAV 139
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V +L NG L++ G + +R+N + + G+VR D++ N VS +A ARISY G+
Sbjct: 140 TVHRVLPNGTLLVKGEKALRLNQGDEYIRLAGLVRMDDINRFNQVSSQNVANARISYAGR 199
Query: 217 GRTTELLRPPIGHQLIEN-LSPL 238
G + + + L PL
Sbjct: 200 GVLNDSNSAGWLTRFFAHPLFPL 222
>gi|254511221|ref|ZP_05123288.1| flagellar L-ring protein FlgH [Rhodobacteraceae bacterium KLH11]
gi|221534932|gb|EEE37920.1| flagellar L-ring protein FlgH [Rhodobacteraceae bacterium KLH11]
Length = 174
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 104/173 (60%), Gaps = 6/173 (3%)
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT------P 124
+ D RA+ GDILTV I +D++A N T RSR S + F L +
Sbjct: 1 MLGDQRAMKKGDILTVVIELDEKAEISNDTNRSRAGSESLAVPDLFGLPQRAGERLPEGA 60
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
++ ++ D S GKGS+ R EKL L +AA V +L NG L ISGSQE+RVN E+R L
Sbjct: 61 SLDEAVSIDSASVSKGKGSVKRKEKLTLRVAATVVDVLPNGVLSISGSQELRVNFELREL 120
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V G VRPQD+ N ++YDKIA AR+SYGG+G+ T++ +P G Q+++ L P
Sbjct: 121 LVAGYVRPQDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQILDTLLP 173
>gi|167892414|ref|ZP_02479816.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
7894]
Length = 213
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 14 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 73
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 74 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 130
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 131 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 190
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 191 KGYINEAETMGWLQRFFLNIAP 212
>gi|319787118|ref|YP_004146593.1| flagellar L-ring protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465630|gb|ADV27362.1| flagellar L-ring protein [Pseudoxanthomonas suwonensis 11-1]
Length = 229
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDD 92
+ + + + + +++ +L+ D A +VGD+LT+++
Sbjct: 23 VAAGDVRPYPPMAPVVPVMPVQAAPTAGAIYAGGQGLSLYGDRIARDVGDLLTINLVEST 82
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
A T S+++ L ++ F + + + +G G+G S++ +L
Sbjct: 83 TAQTSATTQVSKDSELSTGVTSLFGGPVTYKGRDILSASANGERDFDGQGKSSQSNRLQG 142
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
+ V L NGNL++ G + +R+N + + GIVRPQD+ N+V ++ EARI
Sbjct: 143 SVTVSVIQRLPNGNLVVQGQKNLRLNQGDELVQIQGIVRPQDISRDNTVPSSRVGEARIV 202
Query: 213 YGGKGRTTELLRPPIGHQLIEN-LSP 237
YGG+G + + + + P
Sbjct: 203 YGGRGAIAQANAMGWLGRFFNSRIYP 228
>gi|167568426|ref|ZP_02361300.1| flagellar basal body L-ring protein [Burkholderia oklahomensis
C6786]
Length = 216
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + + S++ + LF+D R N+GDILT+ I + A
Sbjct: 17 PREPITQQPMSVMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIVIAENINAT 76
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 77 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 133
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 134 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 193
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 194 KGYINEAETMGWLQRFFLNIAP 215
>gi|167561207|ref|ZP_02354123.1| flagellar basal body L-ring protein [Burkholderia oklahomensis
EO147]
Length = 212
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + + S++ + LF+D R N+GDILT+ I + A
Sbjct: 13 PREPITQQPMSVMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIVIAENINAT 72
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 73 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 129
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 130 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 189
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 190 KGYINEAETMGWLQRFFLNIAP 211
>gi|107023950|ref|YP_622277.1| flagellar basal body L-ring protein [Burkholderia cenocepacia AU
1054]
gi|116691037|ref|YP_836660.1| flagellar basal body L-ring protein [Burkholderia cenocepacia
HI2424]
gi|170734371|ref|YP_001766318.1| flagellar basal body L-ring protein [Burkholderia cenocepacia
MC0-3]
gi|123071887|sp|Q1BSV1|FLGH_BURCA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|166214816|sp|A0KB90|FLGH_BURCH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|105894139|gb|ABF77304.1| flagellar L-ring protein [Burkholderia cenocepacia AU 1054]
gi|116649126|gb|ABK09767.1| flagellar L-ring protein [Burkholderia cenocepacia HI2424]
gi|169817613|gb|ACA92196.1| flagellar L-ring protein [Burkholderia cenocepacia MC0-3]
Length = 229
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G NL+ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFNVPTAGFLGGLFAK---ANLSATGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 206 SKGYINEAETMGWLQRFFLNIAP 228
>gi|15606795|ref|NP_214175.1| flagellar L-ring protein FlgH [Aquifex aeolicus VF5]
gi|6225345|sp|O67609|FLGH_AQUAE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|2984027|gb|AAC07570.1| flagellar L-ring protein FlgH [Aquifex aeolicus VF5]
Length = 216
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 84/233 (36%), Gaps = 20/233 (8%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW- 64
+ + C + + P ++ R SL+
Sbjct: 2 LYLFFALIFIISCSTKVESKKKYTYSFPKTYKEEKPTR-----------------GSLFK 44
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
A L+ RA VGD++ + + A+ T R+ S +S F +
Sbjct: 45 SPQSAYLYGSVRASEVGDVIYIRVIESINAIESVSTNVGRSTSFSNAISSFFGVHPATLK 104
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ G ++ L +A V + NG +++ + + VN R
Sbjct: 105 NLGAGGKSSFAS--KGGSKFQQSGVLTTTLAGRVVKVFPNGTMLVEAKKYIEVNGVKREF 162
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ GIVRP+D+D++N+V+ DKIA+ I + G+G P ++ L P
Sbjct: 163 LLRGIVRPEDIDSNNTVTSDKIADMEIFFEGRGYIVRGGEPGWLAKIFAILFP 215
>gi|170682469|ref|YP_001742376.1| flagellar basal body L-ring protein [Escherichia coli SMS-3-5]
gi|188494218|ref|ZP_03001488.1| flagellar L-ring protein FlgH [Escherichia coli 53638]
gi|306813300|ref|ZP_07447493.1| flagellar basal body L-ring protein [Escherichia coli NC101]
gi|170520187|gb|ACB18365.1| lateral flagellar L-ring protein LfgH [Escherichia coli SMS-3-5]
gi|188489417|gb|EDU64520.1| flagellar L-ring protein FlgH [Escherichia coli 53638]
gi|305854063|gb|EFM54502.1| flagellar basal body L-ring protein [Escherichia coli NC101]
Length = 221
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++ + +L D RA VGDILTV + Q+ +T ++N++ F
Sbjct: 46 AGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGKSNTVDIGAPTIFG- 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D G + + L I V A+ NG L I G + + +N
Sbjct: 105 ----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPNGILEIRGEKWLTLN 160
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ ++G+VR D+ NSVS +IA+ARISY G+G ++ +L + L P
Sbjct: 161 QGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFP 220
Query: 238 L 238
+
Sbjct: 221 I 221
>gi|166712059|ref|ZP_02243266.1| flagellar basal body L-ring protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 212
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 17/226 (7%)
Query: 14 LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALF 72
+L GC ++ ++ M+P+ + + + +++ L+
Sbjct: 1 MLGGCVAAG-DVRPYAAMAPIVPVVAPTVQ--------------PTAGAIYAAGPGLNLY 45
Query: 73 KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNY 132
D RA +VGD+LT+ + A T S+ ++
Sbjct: 46 GDRRARDVGDLLTITLIESTTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQNTL 105
Query: 133 DGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
G A GKG+ +++ ++ + V L NGNL++ G + +R+N + V GIVR
Sbjct: 106 KGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVVQGQKNLRLNQGDELVQVQGIVRA 165
Query: 193 QDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
D+ N++ K+AEARI+YGG+G + + + LSP
Sbjct: 166 ADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSP 211
>gi|171321841|ref|ZP_02910742.1| flagellar L-ring protein [Burkholderia ambifaria MEX-5]
gi|171092879|gb|EDT38131.1| flagellar L-ring protein [Burkholderia ambifaria MEX-5]
Length = 229
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G NL+ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFSVPTAAFLGGLFAK---ANLSAAGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT++L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTSVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 206 SKGYINEAETMGWLQRFFLNIAP 228
>gi|78067834|ref|YP_370603.1| flagellar basal body L-ring protein [Burkholderia sp. 383]
gi|110816526|sp|Q39C57|FLGH_BURS3 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|77968579|gb|ABB09959.1| Flagellar L-ring protein [Burkholderia sp. 383]
Length = 230
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R NVGDILT+ I + A
Sbjct: 31 PRDPIIQQPMTA-QPPTPMSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIMIAENINA 89
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G NL+ G + G S A N I
Sbjct: 90 TKSSGANTNRQGNTDFNVPTAGFLGGLFAK---ANLSATGNNKFAATGGASAANTFNGTI 146
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 147 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 206
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 207 AKGYINEAETMGWLQRFFLNIAP 229
>gi|197122911|ref|YP_002134862.1| flagellar L-ring protein [Anaeromyxobacter sp. K]
gi|226701912|sp|B4UG41|FLGH_ANASK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|196172760|gb|ACG73733.1| flagellar L-ring protein [Anaeromyxobacter sp. K]
Length = 229
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 7/204 (3%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA--LFKDSRALNVGDILTVDIRIDDQ 93
+ R + + S WR+ AA L+ D+RAL V D++ V I
Sbjct: 30 AGHVPKRRDYAVPDAAGQEAQAASAGSTWREGRAASMLYTDARALRVNDLVVVRIEEIAD 89
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A T +R + L+ + + L G GS +R E+L
Sbjct: 90 AKRSADTDLTRRSELNASIEAFLTSL-----DAPYALKGGATTGFKGLGSTARTERLTAT 144
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+ A+V +L NGNL I G + V VN E + ++G+VRP D+D N V +A+A I +
Sbjct: 145 VPAVVRKVLPNGNLFIEGHRVVLVNAEEQHFYISGVVRPIDIDQENGVKSSMVADAEIEF 204
Query: 214 GGKGRTTELLRPPIGHQLIENLSP 237
G+G ++ R +L+ P
Sbjct: 205 TGRGVLSDNQRQGWLSRLLGWFWP 228
>gi|53724568|ref|YP_104801.1| flagellar basal body L-ring protein [Burkholderia mallei ATCC
23344]
gi|67641541|ref|ZP_00440318.1| flagellar L-ring protein FlgH [Burkholderia mallei GB8 horse 4]
gi|254207233|ref|ZP_04913584.1| flagellar L-ring protein FlgH [Burkholderia mallei JHU]
gi|81603729|sp|Q62ES7|FLGH_BURMA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|110816525|sp|Q3JX21|FLGH_BURP1 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|52427991|gb|AAU48584.1| flagellar L-ring protein FlgH [Burkholderia mallei ATCC 23344]
gi|76580178|gb|ABA49653.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1710b]
gi|147752775|gb|EDK59841.1| flagellar L-ring protein FlgH [Burkholderia mallei JHU]
gi|238522492|gb|EEP85936.1| flagellar L-ring protein FlgH [Burkholderia mallei GB8 horse 4]
Length = 222
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 23 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 82
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 83 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 139
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 140 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 199
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 200 KGYINEAETMGWLQRFFLNIAP 221
>gi|167835115|ref|ZP_02461998.1| flagellar basal body L-ring protein [Burkholderia thailandensis
MSMB43]
Length = 209
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 21/227 (9%)
Query: 13 SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AA 70
+ L GC E + + + S++ +
Sbjct: 1 AALAGCA----------------QIPREPITQQPMSAPPPMPPAMQAPGSIYNPGYAGRP 44
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
LF+D R NVGDILT+ I + A + +R + + L G NL
Sbjct: 45 LFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANL 101
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ G + G S A N I VT +L NGNL++SG +++ +N + +G+V
Sbjct: 102 SAQGANKFASTGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVV 161
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P + NSV ++A+A+I Y KG E + N++P
Sbjct: 162 NPNTISGQNSVYSTQVADAKIEYSAKGYINEAETMGWLQRFFLNIAP 208
>gi|323158100|gb|EFZ44199.1| flagellar L-ring family protein [Escherichia coli EPECa14]
Length = 221
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 32 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 91
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ FS + + + D G + + L I V A+ N
Sbjct: 92 SNTVDIGAPTIFS-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 146
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+A ISY G+G ++
Sbjct: 147 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADACISYAGRGALSDANA 206
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 207 AGWLTRLFNHPLFPI 221
>gi|309779450|ref|ZP_07674211.1| flagellar L-ring protein FlgH [Ralstonia sp. 5_7_47FAA]
gi|308921691|gb|EFP67327.1| flagellar L-ring protein FlgH [Ralstonia sp. 5_7_47FAA]
Length = 232
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 86/227 (37%), Gaps = 10/227 (4%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA 70
+ L C +P +P+ R P + + S + + +
Sbjct: 15 AALLATAC-------GMLPPPAPIVQG-PTTARPPMPVMAPRQSGAIYQEVASGSGGFRG 66
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
+F+D RA VGD +T+ I + A +R SL + + + +
Sbjct: 67 MFEDRRAHMVGDTITIVITENTAASKQTSGSVNRTGSLTASVPTFAGMNPGVLSLL--GV 124
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ KG+ I V +L NGNL++SG ++ V S+ +G+V
Sbjct: 125 SASDANKFDSKGANGAQNNFTATITVTVVEVLSNGNLVVSGEKQTAVGQGTESVKFSGVV 184
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P V+ N+V ++A+AR+ Y G G E + + +SP
Sbjct: 185 NPTTVNNQNTVLSTQVADARMEYRGTGYVAESQQMGWLSRFFLTVSP 231
>gi|224373239|ref|YP_002607611.1| flagellar L-ring protein FlgH [Nautilia profundicola AmH]
gi|223589417|gb|ACM93153.1| flagellar L-ring protein FlgH [Nautilia profundicola AmH]
Length = 237
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +Y GC S + P ++ E N
Sbjct: 1 MKKYIIFGSLLVLFFTGCASHSMD----PTINMKPPKYVEQ------MPSQDNDFPQNNP 50
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS-----LHRKLSGG 115
SL+ + LF D++A+ V DI+TV I + + S N+ +SGG
Sbjct: 51 GSLFTNG-DNLFSDTKAMKVNDIVTVIITEEVKQSTQASKKLSETNADNGGLFDATVSGG 109
Query: 116 FSLFGQQTPQMNGNLNYDG-----GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
S+ G+ L+ + + G G+ R E I+A + +L+NGN I
Sbjct: 110 VSINGKDHTFGKTGLSLNFPSMNSNRSFQGSGTQQRNETFQTTISARIVKVLKNGNYFIM 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++E+ V+ + + + ++G++RPQD+ A N++ IA+A+I+Y +G +
Sbjct: 170 GTREIYVDGQKQLIQISGVIRPQDIAADNTIDSKYIADAKIAYKTEGDIKRYTEQNWFAK 229
Query: 231 LIENLSP 237
++P
Sbjct: 230 FWSAIAP 236
>gi|115353115|ref|YP_774954.1| flagellar basal body L-ring protein [Burkholderia ambifaria AMMD]
gi|123128059|sp|Q0BB53|FLGH_BURCM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|115283103|gb|ABI88620.1| flagellar L-ring protein [Burkholderia ambifaria AMMD]
Length = 229
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G N++ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFSVPTAGFLGGLFAK---ANMSAAGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 206 SKGYINEAETMGWLQRFFLNIAP 228
>gi|134297195|ref|YP_001120930.1| flagellar basal body L-ring protein [Burkholderia vietnamiensis G4]
gi|166214817|sp|A4JIJ2|FLGH_BURVG RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|134140352|gb|ABO56095.1| flagellar L-ring protein [Burkholderia vietnamiensis G4]
Length = 229
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--HAALFKDSRALNVGDILTVDIRIDDQA 94
D + P + + S++ LF+D R NVGDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPIAMQAPGSIFNPGFAGRPLFEDQRPRNVGDILTIVIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G NL+ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFNVPTAAFLGGLFAK---ANLSATGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADARIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + NL+P
Sbjct: 206 AKGYINEAETMGWLQRFFLNLAP 228
>gi|213026918|ref|ZP_03341365.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 187
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 59 KSYSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ S+++ + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 2 ANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGF 61
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
++ GG + +GKG + + + + V +L NGNL + G
Sbjct: 62 DTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGE 121
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+++ +N + +G+V P+ + NSV ++A+ARI Y G G E +
Sbjct: 122 KQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFF 181
Query: 233 ENLSPL 238
NLSP+
Sbjct: 182 LNLSPM 187
>gi|269103187|ref|ZP_06155884.1| flagellar L-ring protein FlgH [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163085|gb|EEZ41581.1| flagellar L-ring protein FlgH [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 259
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 24/242 (9%)
Query: 18 CHSSISEITGIPQ----------------------MSPMGSSLDENNRMPFLGIDFKNSD 55
C S+ + + + + +
Sbjct: 19 CASTPDVPQSDIEKGTTTVDAVEGDQSESKGLIDKLRHREDPVAGDPAWGPVRPPVPAEH 78
Query: 56 STKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ SL+ +H L+ D+R ++GDI+T+ + A + ++ ++ K
Sbjct: 79 YVAATGSLFNQTHVQDLYDDTRPHSIGDIVTILLEEKTAAKKSATSELDKSADMNMK-PI 137
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
+ + ++ SG + ++ + I+ V IL NGNL+I G +
Sbjct: 138 ALGGKPVTIHDYSLSYDFSNDNTFSGSSTADQSNSIKGSISVEVIDILANGNLVIRGEKW 197
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + V+G +RP D+ N++ +I+ ARI Y G G ++ +
Sbjct: 198 LTLNSGDEFIRVSGHIRPDDISQDNTIPSTRISNARIQYSGTGDRQDVQDQNWLSRFFNV 257
Query: 235 LS 236
Sbjct: 258 AF 259
>gi|172061969|ref|YP_001809621.1| flagellar basal body L-ring protein [Burkholderia ambifaria MC40-6]
gi|226701913|sp|B1YPA0|FLGH_BURA4 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|171994486|gb|ACB65405.1| flagellar L-ring protein [Burkholderia ambifaria MC40-6]
Length = 229
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R NVGDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G N++ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFSVPTAGFLGGLFAK---ANMSAAGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + NL+P
Sbjct: 206 SKGYINEAETMGWLQRFFLNLAP 228
>gi|332187866|ref|ZP_08389599.1| flagellar L-ring family protein [Sphingomonas sp. S17]
gi|332012027|gb|EGI54099.1| flagellar L-ring family protein [Sphingomonas sp. S17]
Length = 231
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 15/233 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR- 65
+VL + L Q S G + + + S+++
Sbjct: 11 LVLALAVLATA----------PAQASLFGKKKPAEDFTTTRPLPVAAQPVAPANGSIFQA 60
Query: 66 -DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
D +AAL++ RA VGD LT+ + A + L L
Sbjct: 61 ADGYAALYEGWRARRVGDPLTIVLVERTAASKSANSKLGSKGDLGINPPTTGPLGSLL-- 118
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ ++ G +G G+ ++ L+ I+ V + NG +++ G + V +N +
Sbjct: 119 -KSTDIGMGGSRNFNGSGAADQSNSLSGEISVTVAQVFPNGTMLVQGQKRVTLNRGDEFI 177
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ G+VR DV N V ++A+A+I+Y GKG R + + +SP
Sbjct: 178 QIKGLVRMADVGIDNRVPSTRVADAQIAYTGKGDVARASRQGWLSRFFQAVSP 230
>gi|317492425|ref|ZP_07950854.1| flagellar L-ring protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919764|gb|EFV41094.1| flagellar L-ring protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 6/184 (3%)
Query: 60 SYSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ S+++ + LF+D R NVGD LT+ ++ + A + SRN +++
Sbjct: 66 NGSIFQSVQPMNYGYQPLFEDRRPRNVGDTLTISLQENVSASKSSSANASRNGKSSFEVA 125
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++N G GKG + N I V +L NGNL + G +
Sbjct: 126 TAPRYLEGLLGNARADMNMSGDNEFGGKGGANANNTFNGTITVTVAEVLANGNLKVVGEK 185
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
++ +N + +G+V P+ + NSV ++A+ARI Y G G E +
Sbjct: 186 QIAINQGTEFIRFSGVVNPRTISGSNSVVSTQVADARIEYVGSGYINEAQNMGWLQRFFL 245
Query: 234 NLSP 237
NLSP
Sbjct: 246 NLSP 249
>gi|323498417|ref|ZP_08103413.1| flagellar basal body L-ring protein [Vibrio sinaloensis DSM 21326]
gi|323316490|gb|EGA69505.1| flagellar basal body L-ring protein [Vibrio sinaloensis DSM 21326]
Length = 260
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 12/215 (5%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALN 79
+ G P +P+ + G F S S+ L+ DS+
Sbjct: 56 GRNDPVAGDPAWAPIHPKHKPEHYAAETGSLFSASQSSS------------LYDDSKPRG 103
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
+GDI+TV + + +A S+ N + + N + + + +
Sbjct: 104 IGDIITVTLDENTKAAKSANADMSKTNDSSMEPLFVGGQELKVGGDYNFSYDLNNTNTFA 163
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
G S +++ L+ I V +L NGNL+I G + + +N + ++G +RP D+ N
Sbjct: 164 GDASANQSNSLSGSITVEVIEVLGNGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDN 223
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+++ ++++ ARI Y G G ++ P +
Sbjct: 224 TIASNRVSNARIRYSGTGNQQDMQEPGFLARFFNV 258
>gi|167579491|ref|ZP_02372365.1| flagellar basal body L-ring protein [Burkholderia thailandensis
TXDOH]
Length = 220
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 21 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 80
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 81 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 137
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 138 VTVTNVLPNGNLVVSGQKQMLINQGNEFVRFSGVVNPNTISGQNSVYSTQVADARIEYSA 197
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 198 KGYINEAETMGWLQRFFLNIAP 219
>gi|260853469|ref|YP_003227360.1| putative lateral flagellar protein of basal-body outer-membrane L
ring [Escherichia coli O26:H11 str. 11368]
gi|257752118|dbj|BAI23620.1| predicted lateral flagellar protein of basal-body outer-membrane L
ring [Escherichia coli O26:H11 str. 11368]
Length = 246
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 57 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 116
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ FS + + + D G + + L I V A+ N
Sbjct: 117 SNTVDIGAPTIFS-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 171
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+A ISY G+G ++
Sbjct: 172 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADACISYAGRGALSDANA 231
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 232 AGWLTRLFNHPLFPI 246
>gi|149927801|ref|ZP_01916052.1| Flagellar L-ring protein [Limnobacter sp. MED105]
gi|149823423|gb|EDM82654.1| Flagellar L-ring protein [Limnobacter sp. MED105]
Length = 201
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 57 TKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ SL+ + + LF+D RA +GD LT+ I A N SR++S +
Sbjct: 20 AAPTGSLYSPATYRPLFEDQRARFLGDTLTIQIIEQINAAQTNSMSASRSDSASIDVPLI 79
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
FG + + + SG+GS A L I V ++L NGNL + G +++
Sbjct: 80 QGFFGSRDLRAING-SASSDKDFSGEGSSRAANTLTGSITVTVASVLPNGNLQVVGEKQI 138
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
N E+ L +G+V P + N V K+A+ARI Y GKG + +
Sbjct: 139 GTNREVEYLKFSGVVNPITILPGNVVPSTKVADARIEYRGKGALDSATAMGWLSRFFLTV 198
Query: 236 SP 237
P
Sbjct: 199 LP 200
>gi|170703099|ref|ZP_02893919.1| flagellar L-ring protein [Burkholderia ambifaria IOP40-10]
gi|170131996|gb|EDT00504.1| flagellar L-ring protein [Burkholderia ambifaria IOP40-10]
Length = 229
Score = 181 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ + LF+D R N+GDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G N++ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFSVPTAGFLGGLFAK---ANMSAAGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + NL+P
Sbjct: 206 SKGYINEAETMGWLQRFFLNLAP 228
>gi|167900911|ref|ZP_02488116.1| flagellar basal body L-ring protein [Burkholderia pseudomallei NCTC
13177]
Length = 198
Score = 181 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFD 97
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 1 EPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKS 60
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ +R + + L G NL+ G + G S A N I
Sbjct: 61 SGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTITVT 117
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y KG
Sbjct: 118 VTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKG 177
Query: 218 RTTELLRPPIGHQLIENLSP 237
E + N++P
Sbjct: 178 YINEAETMGWLQRFFLNIAP 197
>gi|119947174|ref|YP_944854.1| flagellar basal body L-ring protein [Psychromonas ingrahamii 37]
gi|119865778|gb|ABM05255.1| flagellar L-ring protein [Psychromonas ingrahamii 37]
Length = 232
Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVF 96
N F S ++ SL++ + + +LF D RA +VGDIL V + + +
Sbjct: 35 PPAPNDAAFAPPLLDYSQPKTRNGSLFKPTQSFSLFTDIRAYDVGDILMVYLNEETSSKK 94
Query: 97 DNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
T +++S S N + + G SG S S+ KL+ I
Sbjct: 95 AAGTEFGKSSSAEISAPTFGSSVLD-----NYSASVAGERDFSGSASSSQGNKLSGSITV 149
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V +L NG L I G + + +N + +TG VR +D+++ N++ +IA+ARI+Y GK
Sbjct: 150 TVYEVLPNGVLHIRGEKWITLNQGDEFIRLTGNVRVEDINSDNAIGSQRIADARITYSGK 209
Query: 217 GRTTELLRPPIGHQLIENLS 236
G + Q +
Sbjct: 210 GALADSNAAGWLMQFFTSPW 229
>gi|206558971|ref|YP_002229731.1| flagellar basal body L-ring protein [Burkholderia cenocepacia
J2315]
gi|226701914|sp|B4E8L3|FLGH_BURCJ RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|198035008|emb|CAR50880.1| flagellar L-ring protein precursor (basal body L-ring protein)
[Burkholderia cenocepacia J2315]
Length = 229
Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--HAALFKDSRALNVGDILTVDIRIDDQA 94
D + P S + S++ LF+D R N+GDILT+ I + A
Sbjct: 30 PRDPIIQQPMTA-QPPMPMSMQAPGSIYNPGFAGRPLFEDQRPRNIGDILTIMIAENINA 88
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ +R + + L G NL+ G + G S A N I
Sbjct: 89 TKSSGANTNRQGNTDFNVPTAGFLGGLFAK---ANLSATGANKFAATGGASAANTFNGTI 145
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+A+I Y
Sbjct: 146 TVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYS 205
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 206 SKGYINEAETMGWLQRFFLNIAP 228
>gi|14548030|sp|P58205|FLGH_RHOSH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|11095161|gb|AAG29750.1|AF205139_2 flagellar L-ring protein [Rhodobacter sphaeroides]
Length = 222
Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 19/222 (8%)
Query: 18 CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALF-KDSR 76
C + + + P ++ + + ++ + LF D R
Sbjct: 19 CSTYVEDRASE-------------AWAPVYPVEEAERLDSLPTGGIYSSTSRGLFVSDRR 65
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
A VGDI+TVD A SR + L +L +G L+
Sbjct: 66 AARVGDIVTVDFDEKFSASKSQSASGSRKSDYAIDLPDALTL-----GLDDGVLDNSTDQ 120
Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
SGKG+ S++ L ++ VT +L GNL I G + + +N+ + + G+VRP+D+
Sbjct: 121 GFSGKGAASQSNSLRGRMSVSVTRVLPGGNLEIMGQKLLTLNNGNEYVRLKGVVRPEDIG 180
Query: 197 AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
N V+ D+IA A I Y G G T + + + +SPL
Sbjct: 181 PDNVVTSDRIAHAEIKYIGAGDTADTANAGWLRRGLSVVSPL 222
>gi|167917167|ref|ZP_02504258.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
BCC215]
Length = 201
Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 2 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 61
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 62 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 118
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 119 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 178
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 179 KGYINEAETMGWLQRFFLNIAP 200
>gi|331645421|ref|ZP_08346525.1| flagellar L-ring protein FlgH [Escherichia coli M605]
gi|331045583|gb|EGI17709.1| flagellar L-ring protein FlgH [Escherichia coli M605]
Length = 246
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 60 SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++ + +L D RA VGDILTV + Q+ +T ++N++ F
Sbjct: 71 AGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGKSNTVDIGAPTIFG- 129
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + + D G + + L I V A+ NG L I G + + +N
Sbjct: 130 ----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPNGILEIRGEKWLTLN 185
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSP 237
+ ++G+VR D+ NSVS +IA+ARISY G+G ++ +L + L P
Sbjct: 186 QGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFP 245
Query: 238 L 238
+
Sbjct: 246 I 246
>gi|167736706|ref|ZP_02409480.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 14]
Length = 179
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 59 KSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S++ + LF+D R NVGDILT+ I + A + +R + +
Sbjct: 1 APGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTSFDVPTAG 60
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
L G NL+ G + G S A N I VT +L NGNL++SG +++
Sbjct: 61 FLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQML 117
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + +GIV P + NSV ++A+ARI Y KG E + N++
Sbjct: 118 INQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIA 177
Query: 237 P 237
P
Sbjct: 178 P 178
>gi|167843912|ref|ZP_02469420.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
B7210]
gi|167909131|ref|ZP_02496222.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 112]
Length = 203
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 4 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 63
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 64 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 120
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +GIV P + NSV ++A+ARI Y
Sbjct: 121 VTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGIVNPNTISGQNSVYSTQVADARIEYSA 180
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 181 KGYINEAETMGWLQRFFLNIAP 202
>gi|220917703|ref|YP_002493007.1| flagellar L-ring protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|254789276|sp|B8JD92|FLGH_ANAD2 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|219955557|gb|ACL65941.1| flagellar L-ring protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 229
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA--LFKDSRALNVGDILTVDIRIDDQ 93
+ R + + S WR+ AA L+ D+RAL D++ V I
Sbjct: 30 AGHVPKRRDYAVPDAAGQEAQVASAGSTWREGRAASMLYTDARALRENDLVVVRIEEIAD 89
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A T +R + L+ + + L G GS +R E+L
Sbjct: 90 AKRSADTDLTRRSELNASIEAFLTSL-----DTPYALKGGATTGFKGLGSTARTERLTAT 144
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+ A+V +L NGNL I G + V VN E + ++G+VRP D+D N V +A+A I +
Sbjct: 145 VPAVVRKVLPNGNLFIEGHRVVLVNAEEQHFYISGVVRPIDIDQENGVKSSMVADAEIEF 204
Query: 214 GGKGRTTELLRPPIGHQLIENLSP 237
G+G ++ R +L+ P
Sbjct: 205 TGRGVLSDNQRQGWLSRLLGWFWP 228
>gi|322832567|ref|YP_004212594.1| flagellar L-ring protein [Rahnella sp. Y9602]
gi|321167768|gb|ADW73467.1| flagellar L-ring protein [Rahnella sp. Y9602]
Length = 243
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 59 KSYSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ S+++ + LF+D R NVGD LT+ ++ + A + SRN +
Sbjct: 58 PNGSIFQSVQPMNYGYQPLFEDRRPRNVGDTLTIVLQENVSASKSSSANASRNGATSFGA 117
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ +L+ G +GKG + + + V +L NGNL + G
Sbjct: 118 ATAPRYLEGLFGNARADLDMTGANTFAGKGGAAANNTFSGTLTVTVGEVLANGNLKVVGE 177
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+++ +N + +G+V P+ + N+V ++A+ARI Y G G E +
Sbjct: 178 KQIEINQGTEFIRFSGVVNPRTISGSNAVISTQVADARIEYVGNGYINEAQNMGWLQRFF 237
Query: 233 ENLSPL 238
NLSPL
Sbjct: 238 LNLSPL 243
>gi|307731360|ref|YP_003908584.1| flagellar L-ring protein [Burkholderia sp. CCGE1003]
gi|307585895|gb|ADN59293.1| flagellar L-ring protein [Burkholderia sp. CCGE1003]
Length = 232
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ + + S++ + LF+D R NVGDILT+ I+ + A
Sbjct: 35 QPITQQPMTAMPPMPPQAQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKS 94
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ +RN + + L G NL+ +G + G + + N I
Sbjct: 95 SGANVNRNGTTSFDVPTAGFLGGLFGK---ANLSANGANKFTAAGGANASNTFNGTITVT 151
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
VT +L NGNL++SG +++ +N + +G+V P + N+V ++A+A+I Y KG
Sbjct: 152 VTGVLPNGNLMVSGEKQMLINQGNEFVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKG 211
Query: 218 RTTELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 212 YVDEAQNLGWLQRFFLNVSP 231
>gi|167617588|ref|ZP_02386219.1| flagellar basal body L-ring protein [Burkholderia thailandensis
Bt4]
Length = 202
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAV 95
E + + + S++ + LF+D R NVGDILT+ I + A
Sbjct: 3 PREPITQQPMSAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINAT 62
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R + + L G NL+ G + G S A N I
Sbjct: 63 KSSGANTNRQGNTSFDVPTAGFLGGLFNK---ANLSAQGANKFAATGGASAANTFNGTIT 119
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
VT +L NGNL++SG +++ +N + +G+V P + NSV ++A+ARI Y
Sbjct: 120 VTVTNVLPNGNLVVSGQKQMLINQGNEFVRFSGVVNPNTISGQNSVYSTQVADARIEYSA 179
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E + N++P
Sbjct: 180 KGYINEAETMGWLQRFFLNIAP 201
>gi|242278486|ref|YP_002990615.1| flagellar basal body L-ring protein [Desulfovibrio salexigens DSM
2638]
gi|242121380|gb|ACS79076.1| flagellar L-ring protein [Desulfovibrio salexigens DSM 2638]
Length = 232
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 24/246 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + ++ GC P+ + M +
Sbjct: 1 MKKTTLATMLLLAICAGCS-------------PVKQAPTPMPVMTPPAQY--EPEPMNNP 45
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ S LF D+RA +GDI+ V + + + + + N ++ +
Sbjct: 46 GSLFAASDSEYLFDDNRARRIGDIVVVTVSETSKGKHTSDSKAEKKNDTSLAVTNFSAGL 105
Query: 120 GQ--------QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+ S G L +A V IL + + G
Sbjct: 106 ATAVDPFNMKGGAGDTPLIGSATSNKFSSTGETKNESTLTASVACRVVRILPGNVMQVEG 165
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+++VR+NDE + L V G++R +D+ N+V+ + +A+A I G+G + RP ++
Sbjct: 166 ARQVRINDETQVLVVRGLLRHRDIGPSNTVASNYLADAHIEVYGRGILADKQRPGWLSRI 225
Query: 232 IENLSP 237
++N+ P
Sbjct: 226 LDNVWP 231
>gi|160896076|ref|YP_001561658.1| flagellar L-ring protein [Delftia acidovorans SPH-1]
gi|160361660|gb|ABX33273.1| flagellar L-ring protein [Delftia acidovorans SPH-1]
Length = 235
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 15/233 (6%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD- 66
L +++L GC + +D + P + + + SL+
Sbjct: 14 CLALAAVLSGCTTLND-----------PPPVDMPSTAPPVLPQPAPVAGSP-TGSLFNAA 61
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
S+ F++ RA VGD++TV I A + +G R+N +S G +
Sbjct: 62 SYRPGFENRRARLVGDLVTVQIVERVTASQKSDSGLKRSNKTTAGISALPLFSGNALANL 121
Query: 127 NG--NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
N+ ++ +G GS S I+ V +L NG+L+I+G +++ VN + L
Sbjct: 122 KDRSNIGFNNNNDYTGSGSTSSDNTFTGAISTTVVDVLPNGHLVIAGEKQIGVNHNVDVL 181
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
TG V P+ + + V+ ++A R+ +G+ E + N+ P
Sbjct: 182 RFTGTVDPRTMQPGSLVASTQVANVRVESRSRGQAGEAQSIGWLSRFFLNVMP 234
>gi|224825780|ref|ZP_03698884.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
gi|224602004|gb|EEG08183.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
Length = 215
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 7/198 (3%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDN 98
R F S + ++ A +L DSRA VGD LTV + QA
Sbjct: 21 PPPRAEFEPPLPPKSAARGVGGGVYTAGGAWSLVTDSRAYRVGDALTVVLEETTQASKKA 80
Query: 99 QTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIV 158
+ + + + + +N + D G S ++ L+ ++ IV
Sbjct: 81 GALLDKKSGASIQPTIL------GSKTINTKVGIDADRTFDGSSSSTQQNALSGALSVIV 134
Query: 159 TAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGR 218
+L NG L++ G +++ +N L + G VR D+D N VS +IA ARI+Y G+G
Sbjct: 135 HQVLPNGLLLVKGEKQLTLNQGEEYLQLAGYVRVDDIDTDNRVSSQRIANARIAYSGRGV 194
Query: 219 TTELLRPPIGHQLIENLS 236
++ P + +
Sbjct: 195 LSDANAPGWLTRFFTSPW 212
>gi|307313516|ref|ZP_07593137.1| flagellar L-ring protein [Escherichia coli W]
gi|306906684|gb|EFN37195.1| flagellar L-ring protein [Escherichia coli W]
gi|315059545|gb|ADT73872.1| flagellar protein of basal-body outer-membrane L ring [Escherichia
coli W]
gi|323379896|gb|ADX52164.1| flagellar L-ring protein [Escherichia coli KO11]
Length = 247
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ ++ ++ + +L D RA VGDILTV + Q+ +T +
Sbjct: 58 APPKTEAPPPADGRAGGVFETGYNWSLTADRRAYRVGDILTVILEESTQSSKQAKTNFGK 117
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+N++ F + + + D G + + L I V A+ N
Sbjct: 118 SNTVDIGAPTIFG-----HTKDKLSGSIDANRDFDGSATSQQQNSLRGEITVSVHAVQPN 172
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G L I G + + +N + ++G+VR D+ NSVS +IA+ARISY +G ++
Sbjct: 173 GILEIRGEKWLTLNQGDEYIRLSGLVRADDIQNDNSVSSQRIADARISYAVRGALSDANA 232
Query: 225 PPIGHQLIEN-LSPL 238
+L + L P+
Sbjct: 233 AGWLTRLFNHPLFPI 247
>gi|78776932|ref|YP_393247.1| flagellar basal body L-ring protein [Sulfurimonas denitrificans DSM
1251]
gi|110816546|sp|Q30SL9|FLGH_SULDN RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|78497472|gb|ABB44012.1| Flagellar L-ring protein [Sulfurimonas denitrificans DSM 1251]
Length = 240
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 22/249 (8%)
Query: 1 MYR---YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R F+ + L GC +++S+ P + +++
Sbjct: 1 MIRNFLLFFMPIYAILFLSGCTANLSD--PEIDFEPPAYVEE--------MPSKEDNKDF 50
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S++ LF D +A++V DI+TV I + Q+ S ++SL+ S
Sbjct: 51 TSVGSVFGQGENPLFSDHKAMHVNDIVTVIISENTQSSNSGSKQISESDSLNLGGGAFTS 110
Query: 118 LF---------GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
+ N A G+GS ++ ++A + +L+NGN
Sbjct: 111 AGTNSAVNSAVSKLNGIANLGFGSTSDSAYKGQGSATKDASFTTTVSARIVKVLQNGNYF 170
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
ISG +E+ V+++ + + + G++RP D+D N ++ +++EA+I Y +G G
Sbjct: 171 ISGKREILVDNQKQIIQIGGVIRPYDIDQGNRINSSQMSEAKILYKTQGDVERATDRGWG 230
Query: 229 HQLIENLSP 237
++I+++ P
Sbjct: 231 TKIIQSVWP 239
>gi|289679020|ref|ZP_06499910.1| flagellar basal body L-ring protein [Pseudomonas syringae pv.
syringae FF5]
Length = 185
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 61 YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ L+ D +A +GDI+T+ + A + S+N++ L+ F
Sbjct: 1 GAIYQAGFEQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKNSNNSIGLTSLFGSG 60
Query: 120 GQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ N Y+G + G G +++ L + V +L NG L + G +
Sbjct: 61 LTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGILAVRGEKW 120
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + + G+VR D+ N+VS +IA+ARI+Y G G + +P +
Sbjct: 121 MTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFF-- 178
Query: 235 LSPL 238
LSPL
Sbjct: 179 LSPL 182
>gi|317153842|ref|YP_004121890.1| flagellar L-ring protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944093|gb|ADU63144.1| flagellar L-ring protein [Desulfovibrio aespoeensis Aspo-2]
Length = 236
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 1 MYRYSFIVLCYSSLLF-----GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M RY I + L GC + E+ +P ++P ++ +
Sbjct: 1 MRRYFLIAVAAVMLASLVLTAGCANKYEEM-PMPVLTP---------------PVYEEQN 44
Query: 56 STKKSYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS- 113
SL+ + + L+ D+RA VGDI+ V + + + ++T R+NS +S
Sbjct: 45 PAANPGSLFDSNRSEFLYDDNRASRVGDIVLVQVAEESNSRIKSETKAKRDNSNTLSVSA 104
Query: 114 -------GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
G L G ++ +L+ G + + ++A + L
Sbjct: 105 MPETGLIGNLPLAGTLGAKVGTSLDTSTVSDLKSNGETKQESEFEAIVATRIVRKLPGNL 164
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
L + G++ +RVN+E + L V G++R +D+ + N++ +AEA+I G+G + RP
Sbjct: 165 LQVEGARRIRVNNETQFLVVRGLIRQRDISSSNTIPSTSLAEAQIEIFGQGVLADKQRPG 224
Query: 227 IGHQLIENLSP 237
++I+N+ P
Sbjct: 225 WLSRIIDNIYP 235
>gi|74317649|ref|YP_315389.1| flagellar L-ring protein FlgH [Thiobacillus denitrificans ATCC
25259]
gi|110816545|sp|Q3SIE4|FLGH_THIDA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|74057144|gb|AAZ97584.1| flagellar L-ring protein precursor FlgH [Thiobacillus denitrificans
ATCC 25259]
Length = 222
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
Query: 35 GSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQ 93
G++ P + + ++++ + + LF+D RA +VGD+LT+ I +
Sbjct: 20 GTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFEDRRARHVGDVLTIVINERTR 79
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A + + S+ +++ + G L + + +N + + ++ + +
Sbjct: 80 AGKEASSSASKTSAVDASVGGVAKLPLKMFQGL--GINAEASAEYEDESALDSSNTFSGN 137
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+ V +L NGNL+++G +++ ++ + ++G+V+P + A N+VS K+A+ARI Y
Sbjct: 138 VTVTVIEVLPNGNLVVAGEKQIGLDKGTEYIRLSGVVQPDTIQAGNTVSSAKVADARIEY 197
Query: 214 GGKGRTTELLRPPIGHQLIENLSPL 238
+ + + + PL
Sbjct: 198 RSSAKFDKAEVMNWLGRFFLSFIPL 222
>gi|323527710|ref|YP_004229863.1| flagellar L-ring protein [Burkholderia sp. CCGE1001]
gi|323384712|gb|ADX56803.1| flagellar L-ring protein [Burkholderia sp. CCGE1001]
Length = 232
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ + + S++ + LF+D R NVGDILT+ I+ + A
Sbjct: 35 QPITQQPMTAMPPMPPQAQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKS 94
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ G +R+ + + L G NL+ G + G + + N I
Sbjct: 95 SGAGVNRSGNTSFDVPTAGFLGGLFGK---ANLSASGANKFASTGGANASNTFNGTITVT 151
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
VT +L NGNL++SG +++ +N + +G+V P + N+V ++A+A+I Y KG
Sbjct: 152 VTGVLPNGNLMVSGEKQMLINQGNEFVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKG 211
Query: 218 RTTELLRPPIGHQLIENLSP 237
E + N+SP
Sbjct: 212 YVDEAENMGWLQRFFLNVSP 231
>gi|84514830|ref|ZP_01002193.1| Flagellar L-ring protein [Loktanella vestfoldensis SKA53]
gi|84510989|gb|EAQ07443.1| Flagellar L-ring protein [Loktanella vestfoldensis SKA53]
Length = 215
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ + + S+L GC + + + Q P+ N S +
Sbjct: 1 MFIFRVLTPFALSILAGCSTYVEDEASA-QFQPVLPDSTYN--------------SGPSN 45
Query: 61 YSLWRDSHAALFK-DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ + LF + RA VGD+LTV + QA ++++ L S
Sbjct: 46 GSIYHPGVSGLFAVEQRASKVGDVLTVALNESFQATKSQTATADKSDTTTANLPRFIS-- 103
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + +G G+ ++ L+ V + NGNL I G +++ +N
Sbjct: 104 -------PNDPEFGMTQSFAGSGAAEQSNTFTGLVTVSVVRVFPNGNLQILGQKKLTLNS 156
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+ V+GIVR D+ N VS +++A A I+Y G G + + + + + +L
Sbjct: 157 GDEYVRVSGIVRRSDISPANIVSSNRLANAEITYTGAGDIADTAKRGLFSRAVSSL 212
>gi|330501140|ref|YP_004378009.1| flagellar basal body L-ring protein [Pseudomonas mendocina NK-01]
gi|328915426|gb|AEB56257.1| flagellar basal body L-ring protein [Pseudomonas mendocina NK-01]
Length = 223
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 86/225 (38%), Gaps = 20/225 (8%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKD 74
GC S + M D ++ P S L+R ++ +L D
Sbjct: 17 GGCAS----------FNEMLPDEDSSHYEPLAL---DYSVPPTTGGGLFRSGYSGSLIGD 63
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA+ VGDILTV + Q+ T + + + + +
Sbjct: 64 KRAVRVGDILTVVLDESTQSSKSAGTSFGKTANAAIGIPTVLGKTYDRL-----ESSASA 118
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
+G S+ L IA V +L NG L+I G + +R+N + + G+VR D
Sbjct: 119 ERDFNGSARSSQQNTLRGSIAVTVHQVLPNGTLLIKGEKALRLNQGDEYIRLVGLVRMDD 178
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238
++ N VS +A ARISY G+G + + + L PL
Sbjct: 179 INRANQVSSQNVANARISYAGRGVLNDSNSAGWLTRFFTSPLFPL 223
>gi|188576759|ref|YP_001913688.1| flagellar basal body L-ring protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188576951|ref|YP_001913880.1| flagellar basal body L-ring protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521211|gb|ACD59156.1| flagellar L-ring protein FlgH [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521403|gb|ACD59348.1| flagellar L-ring protein FlgH [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 207
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 2/206 (0%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDD 92
M + + + +++ L+ D RA +VGD+LT+ +
Sbjct: 1 MAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGLNLYGDRRARDVGDLLTITLIEST 60
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
A T S+ ++ G A GKG+ +++ ++
Sbjct: 61 TASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQNTLKGDRAFDGKGNTAQSNRMQG 120
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
+ V L NGNL++ G + +R+N + V GIVR D+ N++ K+AEARI+
Sbjct: 121 SVTVTVIQRLPNGNLVVQGQKNLRLNQGDELVQVQGIVRDADIAPDNTIPSSKVAEARIA 180
Query: 213 YGGKGRTTELLRPPIGHQLIEN-LSP 237
YGG+G + + + LSP
Sbjct: 181 YGGRGAIAQSNAMGWLSRFFNSRLSP 206
>gi|241761148|ref|ZP_04759237.1| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752889|ref|YP_003225782.1| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241374767|gb|EER64228.1| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552252|gb|ACV75198.1| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 228
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 87/241 (36%), Gaps = 23/241 (9%)
Query: 2 YRYSFIVLCYSSLLFGCH---SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
+ SF + + + + P + +P
Sbjct: 5 MKPSFSAMLIAVAVLAVSPLHARKKVTQPDPNFAATYPDDPRPEVVP------------- 51
Query: 59 KSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ ++++ + + +RA +VGD++T+ + A T SR+
Sbjct: 52 -NGAIFQPSYGYMPIISGARASHVGDMVTITLVESFAASKSANTTTSRSGGASIIPPTT- 109
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G + + G G+ ++ L+ I A V + +G ++I G + +
Sbjct: 110 ---GPLSFFKATDATASSSHNFKGTGTTGQSNSLSGEITATVARVFPDGTMLIRGEKIMT 166
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + ++G+VRP D+D N V +I +ARISY G G R + +S
Sbjct: 167 INRGDEHIRISGLVRPWDIDGTNHVLSTRIGDARISYTGTGDVARASRMGWLGHFFQMIS 226
Query: 237 P 237
P
Sbjct: 227 P 227
>gi|319764542|ref|YP_004128479.1| flagellar l-ring protein [Alicycliphilus denitrificans BC]
gi|330826758|ref|YP_004390061.1| flagellar L-ring protein [Alicycliphilus denitrificans K601]
gi|317119103|gb|ADV01592.1| flagellar L-ring protein [Alicycliphilus denitrificans BC]
gi|329312130|gb|AEB86545.1| flagellar L-ring protein [Alicycliphilus denitrificans K601]
Length = 227
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 15/223 (6%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW-RDSHAALFKD 74
GC + + + + + SL+ S+ F+D
Sbjct: 18 TGCATLNP------------PPPVDLLPTAPPPVAATPRPTGPATGSLFHAASYRPAFED 65
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGDI+T+ I A ++ + R+ + +S + + ++ +L
Sbjct: 66 RRARMVGDIVTIQIVEQVTAKQNSTSSIDRSANTSAGISAFPFIGAGKLGKL--DLGAKS 123
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
SGKG + I A V +L NG+L+++G +++ VN+ + L +G V P+
Sbjct: 124 ANQFSGKGGTESSNTFTGTITATVIEVLPNGHLVVAGEKQIGVNENVDVLRFSGTVDPRS 183
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + V+ ++A AR+ G+G +E + +++P
Sbjct: 184 LQPGSVVASTQVANARLQSRGRGAQSEAQAMGWLSRAFNSVAP 226
>gi|86157775|ref|YP_464560.1| flagellar L-ring protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|110816523|sp|Q2IQP0|FLGH_ANADE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|85774286|gb|ABC81123.1| flagellar L-ring protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 229
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA--LFKDSRALNVGDILTVDIRIDDQ 93
+ R + + S WR+ AA L+ D+RAL D++ V I
Sbjct: 30 AGYVPKRRDYAVPDASGQDTQAASAGSTWREGRAASMLYTDARALRENDLVVVRIEEIAD 89
Query: 94 AVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
A T +R + L+ + + L G GS +R E+L
Sbjct: 90 AKRSADTDLTRRSELNASIEAFLTSLST-----PYALKGGADSGFKGLGSTARTERLTAT 144
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+ A+V +L NGNL I G + V VN E + ++G+VRP D+D N V +A+A I +
Sbjct: 145 VPAVVRKVLPNGNLFIEGHRVVLVNAEEQHFYISGVVRPIDIDQENGVKSSMVADAEIEF 204
Query: 214 GGKGRTTELLRPPIGHQLIENLSP 237
G+G ++ R +L+ P
Sbjct: 205 TGRGVLSDNQRQGWLSRLLGWFWP 228
>gi|311087757|gb|ADP67836.1| flagellar basal body L-ring protein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 254
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 26/242 (10%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ ++ + + C S + P+ + N + S
Sbjct: 9 KKYYLTAIFLLTIQSCASV--------EYKPLVTGATT--------AIAPNIWPKVVNGS 52
Query: 63 LWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
L+++ + LF+D R N+GD +TV ++ + A + + SR+ S + L
Sbjct: 53 LFQEKIPINYGYQPLFEDHRPHNIGDTITVVLQENISASNSSISNMSRDGSANFGLKIAP 112
Query: 117 SLFGQQTP----QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+L+ G SGKGS S K LI V +L NGNL + G
Sbjct: 113 GQLNNILGVNFQDNTTSLDSFGRNNFSGKGSNSANNKFTGLITVTVKRVLPNGNLKVIGE 172
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
++V +N + +G++ P +++ +N +S +IA+ARI Y G ++ + +L+
Sbjct: 173 KQVSINKGTEFIRFSGVINPTNINKNNFISSTQIADARIEYLSHGGLDDVQKMGWLQKLL 232
Query: 233 EN 234
Sbjct: 233 LK 234
>gi|295678055|ref|YP_003606579.1| flagellar L-ring protein [Burkholderia sp. CCGE1002]
gi|295437898|gb|ADG17068.1| flagellar L-ring protein [Burkholderia sp. CCGE1002]
Length = 215
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
L + L GC + P + + S++ +
Sbjct: 3 LTLLAALGGCA-----------LVPKQPITQQPMTA-----LPPVPPQAQAPGSIYNPGY 46
Query: 69 --AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
LF+D R NVGDI+T+ I + A ++ SRN S + + L G
Sbjct: 47 AGRPLFEDQRPRNVGDIITIVIAENINATKNSGANASRNGSTNLSVPTAGFLSGLFAK-- 104
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNV 186
NL+ G +G G + + N I VT + NGNLI+SG +++ +N +
Sbjct: 105 -TNLSAAGANGFAGTGGANASNTFNGTITVTVTGVQANGNLIVSGEKQMLINQGNEFVRF 163
Query: 187 TGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P + + N+V ++A+A+I Y KG E + N++P
Sbjct: 164 SGVVNPNTISSLNAVYSTQVADAKIEYSAKGYINEAETMGWLQRFFLNVAP 214
>gi|209521592|ref|ZP_03270290.1| flagellar L-ring protein [Burkholderia sp. H160]
gi|209497975|gb|EDZ98132.1| flagellar L-ring protein [Burkholderia sp. H160]
Length = 233
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 5/200 (2%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ + + S++ + LF+D R NVGDI+T+ I + A
Sbjct: 36 QPITQQPMTALPPIPPQAQAPGSIYNPGYAGRPLFEDQRPRNVGDIITIVIAENINATKS 95
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ +RN S + L G NL+ G +G G + + N I
Sbjct: 96 SGANANRNGSTKFDVPTAGFLGGLFAK---TNLSATGTNGFAGTGGANASNTFNGTITVT 152
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
VT + NGNLI+SG +++ +N + +G+V P + + N+V ++A+A+I Y KG
Sbjct: 153 VTGVQPNGNLIVSGEKQMLINQGNEFVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKG 212
Query: 218 RTTELLRPPIGHQLIENLSP 237
E + N++P
Sbjct: 213 YIDEAENMGWLQRFFLNVAP 232
>gi|283856290|ref|YP_162343.2| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|292495079|sp|Q9Z5T8|FLGH_ZYMMO RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|283775286|gb|AAV89232.2| flagellar L-ring protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 228
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 87/241 (36%), Gaps = 23/241 (9%)
Query: 2 YRYSFIVLCYSSLLFGCH---SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
+ SF + + + + P + +P
Sbjct: 5 MKPSFSAMLIAVTVLAVSPLHARKKVTQPDPNFAATYPDDPRPEVVP------------- 51
Query: 59 KSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ ++++ + + +RA +VGD++T+ + A T SR+
Sbjct: 52 -NGAIFQPSYGYMPIISGARASHVGDMVTITLVESFAASKSANTTTSRSGGASIIPPTT- 109
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G + + G G+ ++ L+ I A V + +G ++I G + +
Sbjct: 110 ---GPLSFFKATDATASSSHNFKGTGTTGQSNSLSGEITATVARVFPDGTMLIRGEKIMT 166
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+N + ++G+VRP D+D N V +I +ARISY G G R + +S
Sbjct: 167 INRGDEHIRISGLVRPWDIDGTNHVLSTRIGDARISYTGTGDVARASRMGWLGHFFQMIS 226
Query: 237 P 237
P
Sbjct: 227 P 227
>gi|308186396|ref|YP_003930527.1| Flagellar L-ring protein precursor [Pantoea vagans C9-1]
gi|308056906|gb|ADO09078.1| Flagellar L-ring protein precursor [Pantoea vagans C9-1]
Length = 195
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 8/194 (4%)
Query: 53 NSDSTKKSYSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
S + S+++ + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 2 PSAPPVVNGSIFQGVAPLNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSASASRDG 61
Query: 107 SLHRKLSGGFSLFGQQTPQMN--GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
S +SG + NL+ +G +GKG S I V +L N
Sbjct: 62 SNSFGVSGVPTGLAGLVGAGGEKANLSAEGKNDFAGKGGASANNTFTGTITVTVDQVLSN 121
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
GNL + G +++ +N + +G+V P+ + A N+V +A+ARI Y G G E
Sbjct: 122 GNLHVVGEKQIAINQGTEFIRFSGVVNPRTISASNAVLSTAVADARIEYVGNGYINEAQT 181
Query: 225 PPIGHQLIENLSPL 238
+ N+SP+
Sbjct: 182 MGWFQRFFLNISPM 195
>gi|307721385|ref|YP_003892525.1| flagellar L-ring protein [Sulfurimonas autotrophica DSM 16294]
gi|306979478|gb|ADN09513.1| flagellar L-ring protein [Sulfurimonas autotrophica DSM 16294]
Length = 240
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 1 MYRY---SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + +FI+L + GC +++++ P+++ + E ++
Sbjct: 1 MNKIKLTTFILLLSVVVFSGCTANLTD----PEINFEPPAYVEQ------MPAKEDQQDF 50
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S++ LF D +A++V DI+TV I ++ S N++ S
Sbjct: 51 ASTGSIFGQGENPLFSDHKAMHVSDIVTVVISEAAKSSNTGSKQLSENDTSALGGGLFSS 110
Query: 118 LF---------GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
N N + A G GS ++ I+A + IL+NGN
Sbjct: 111 TGVNSAMNSKVADINGFSNVGFNSNSSSAYKGSGSATKDASFTTTISARIVKILKNGNYY 170
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
ISG +E+ ++D+ + + ++G++RP D+D +N ++ +I++A+I Y +G + G
Sbjct: 171 ISGKREILIDDQKQIVQLSGVIRPYDIDQYNKINSSQISDAKILYKTEGDMDRATQQGWG 230
Query: 229 HQLIENLSP 237
++++++ P
Sbjct: 231 TKIVQSIWP 239
>gi|242309080|ref|ZP_04808235.1| flagellar L-ring protein [Helicobacter pullorum MIT 98-5489]
gi|239524504|gb|EEQ64370.1| flagellar L-ring protein [Helicobacter pullorum MIT 98-5489]
Length = 228
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 22/236 (9%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
L GC ++ PQ+S + E + D+ S++ L
Sbjct: 4 GFLFNGCANT------DPQISFKPPAYVEE------LPPKEEEDNFGNPGSIFGRGDNLL 51
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF----------SLFGQ 121
F D RA+ + D++TV I QA + N+S + G
Sbjct: 52 FSDRRAMQLNDLVTVIINQTAQASSSANKNLNENSSGTLGGPSLTYAGSSSSINSIVNGI 111
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
G + +G G+ +R E IAA + +L+NGN I GS+EV +N E
Sbjct: 112 NNATGFGINLGNNTSTYAGTGTQNRQETFTTTIAARIIKVLQNGNYFIEGSREVLINGEK 171
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++++G+VRP D+ +N++ IA+A+I Y +G + G +LIE++ P
Sbjct: 172 QIIHLSGVVRPTDIARNNTIESQYIADAKIMYDTQGELKKNTEKGWGTKLIESIWP 227
>gi|89902480|ref|YP_524951.1| flagellar L-ring protein [Rhodoferax ferrireducens T118]
gi|89347217|gb|ABD71420.1| flagellar L-ring protein [Rhodoferax ferrireducens T118]
Length = 243
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 12/232 (5%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ L L C S P ++D + + S S SL++
Sbjct: 22 LTLVLGLTLSACGS-----------LPQPVNVDFVQADTAPPMAAAPAASQAASGSLFQK 70
Query: 67 -SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
S+ F+D RA +GD++T+ I + A +++ +R S +S +
Sbjct: 71 VSYRPSFEDPRARMIGDVVTIRIVENVAASQVSKSTANRTTSGAASISAFPLVSPADLLN 130
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + SGKG A I A V +L NG+L+++G +++ VN + L
Sbjct: 131 LKAGVGTSSANDFSGKGGTESANTFTGTITATVVRVLPNGHLVVTGDKQIGVNQNVDVLR 190
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G + P + N ++ ++A ARI G+G E + + P
Sbjct: 191 FSGTIDPHLIQPGNLINSSQVANARIESKGRGAQAEAQTVGWLTRFFFSFLP 242
>gi|291288377|ref|YP_003505193.1| flagellar L-ring protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885537|gb|ADD69237.1| flagellar L-ring protein [Denitrovibrio acetiphilus DSM 12809]
Length = 239
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R +++ + + GC P + +N+ L K ++ K
Sbjct: 1 MKVRILLMMIATALVFTGCA-------KKPDF---NNDALKNSYQKELEEYKKQQEARKP 50
Query: 60 SYSLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S SLW ++ A +LF D + +VGDI+ ++I A N T S++ S L+
Sbjct: 51 SPSLWMEASAKGSLFLDYKGRHVGDIIIINIVESTSASNSNSTSTSKSQSASSTLTNLMG 110
Query: 118 LFGQQT--------PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
L ++ N + D + +G GS ++A+ + IAA VT +L +GNL+I
Sbjct: 111 LPANLGVTNLLGTGNALDLNNSLDSSSSFAGNGSKTKADTIQGTIAARVTDVLPSGNLVI 170
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G +E+ V++E +++ ++GIVR +D+DA N+VS IA+A+I+Y G+G ++ +P
Sbjct: 171 EGHRELIVDNEKQTITLSGIVRQKDLDASNTVSSTSIADAKIAYSGQGMLSDSNKPGWLM 230
Query: 230 QLIENLSP 237
L + P
Sbjct: 231 TLFNWIMP 238
>gi|254462235|ref|ZP_05075651.1| flagellar L-ring protein FlgH [Rhodobacterales bacterium HTCC2083]
gi|206678824|gb|EDZ43311.1| flagellar L-ring protein FlgH [Rhodobacteraceae bacterium HTCC2083]
Length = 216
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 87/231 (37%), Gaps = 25/231 (10%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
L C + + + P+ +E S++
Sbjct: 7 VFAALMLCALGACSTYVEDEASH-AFQPVMPEANERT--------------GPADGSIYH 51
Query: 66 DSHAALFK-DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
+ + LF + RA VGDILT+ + QA ++++SL + ++
Sbjct: 52 ANASGLFAVEQRASKVGDILTIALNESFQATKSQTASAAKSDSLSLSVPNLLNVPV---- 107
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ G G+ ++ L+ V ++ NGNL + G +++ +N+ +
Sbjct: 108 -----ASTGSAQNFEGNGAAEQSNSFTGLVTVSVVRVMSNGNLEVLGQKKLTLNNGDEYV 162
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
V+G+VR D+ N V+ +++A A I+Y G G + + + L
Sbjct: 163 RVSGLVRQSDISPTNVVNSNRLANAEITYIGAGDLADTAKRGWIPKAFSAL 213
>gi|152997579|ref|YP_001342414.1| flagellar L-ring protein [Marinomonas sp. MWYL1]
gi|150838503|gb|ABR72479.1| flagellar L-ring protein [Marinomonas sp. MWYL1]
Length = 283
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 6/214 (2%)
Query: 22 ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRALNV 80
+ + + S+ ++ + S + +++ S F D +A V
Sbjct: 70 VPDPNDPLNGPNISQSIQSDDPYYAPVYPNGMNPSQAPTGGIYQTSMGDVFFGDQKASKV 129
Query: 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSG 140
GDILT+++ + N S+++S + + + G SG
Sbjct: 130 GDILTINLNETTTSTKANAATVSKSSSATIENPTVLGQELKMDTTLP-----QQGTDFSG 184
Query: 141 KGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNS 200
S ++ L+ I+ V NG L + G + +R+N + +GIVR QD+ +N+
Sbjct: 185 NASANQNNSLSGTISVTVYRAYPNGLLAVRGEKWLRLNQGDEYIRFSGIVRKQDISPNNT 244
Query: 201 VSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
V +++A+ARI+Y G G +L+ +
Sbjct: 245 VESERVADARITYSGTGDVAAGSEQGWVSRLLNS 278
>gi|238796907|ref|ZP_04640411.1| Flagellar L-ring protein [Yersinia mollaretii ATCC 43969]
gi|238719167|gb|EEQ10979.1| Flagellar L-ring protein [Yersinia mollaretii ATCC 43969]
Length = 189
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 79/188 (42%)
Query: 50 DFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH 109
+ S ++ + +F+D R NVGD LT+ ++ + A + +R S
Sbjct: 1 MAVANGSVFQTGQAMSYGYQPMFEDRRPRNVGDTLTIVLQENVSASKSSSANANRGGSTG 60
Query: 110 RKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
N G +GKG + + I V +L+NGNL +
Sbjct: 61 LSFDAVPGAMSGLFGGDKANAAISGSSDFTGKGGAAAKNTFSGTITVTVQQLLQNGNLKV 120
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G +++ +N + +G+V P+ + + NSV ++++ARI Y G G E +
Sbjct: 121 VGEKQIAINQGTEFIRFSGVVNPRTISSSNSVISTQVSDARIEYVGNGYINEAQQMGWLQ 180
Query: 230 QLIENLSP 237
+L NLSP
Sbjct: 181 RLFLNLSP 188
>gi|254459364|ref|ZP_05072785.1| flagellar L-ring protein FlgH [Campylobacterales bacterium GD 1]
gi|207083977|gb|EDZ61268.1| flagellar L-ring protein FlgH [Campylobacterales bacterium GD 1]
Length = 240
Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 101/249 (40%), Gaps = 22/249 (8%)
Query: 1 MYRYSFIVLC---YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + I L GC ++++E P+++ + E ++
Sbjct: 1 MIKLILIFFMSFYAILFLSGCTANLTE----PEINFEPPAYVEQ------MPSKEDKQDY 50
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL----- 112
S++ LF D +A++V DI+ V I + Q+ S ++
Sbjct: 51 TSIGSIFGQGDNPLFSDHKAMHVNDIVRVVISENAQSSSTAAKDLSEADTSALGGGTFAA 110
Query: 113 ----SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
S + N G GS ++ ++A + +++NGN
Sbjct: 111 TGGNPAVSSYANKLNGLSNIGFTGTSTSTYQGAGSATKDASFTTTVSARIVKVMQNGNYF 170
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
ISG +E+ V+++ + + ++G++RP D+D +N + +++EA+I Y +G + G
Sbjct: 171 ISGKREILVDEQKQIIQISGVIRPYDIDQYNKIDSAQMSEAKILYQTQGDVDRATKQGWG 230
Query: 229 HQLIENLSP 237
++I+ P
Sbjct: 231 TKIIQAAWP 239
>gi|170737041|ref|YP_001778301.1| flagellar L-ring protein [Burkholderia cenocepacia MC0-3]
gi|169819229|gb|ACA93811.1| flagellar L-ring protein [Burkholderia cenocepacia MC0-3]
Length = 221
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 19/233 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ +LL GC + + +P + R L
Sbjct: 5 RFVAMGGVLALLGGCATGPFDR-SLPDFDDSMPDTVFDVRR------------GTAGGVL 51
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
D +L D RA GD+LTVD+ QA + T +++SL K F
Sbjct: 52 VPDQAWSLTSDVRAFRAGDVLTVDLEESTQASKKSGTQVGKDSSLSAKKPSLFG------ 105
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ +G GS S+ L + +V ++ NG L + G + + +N +
Sbjct: 106 KALPVEAELGTKSGFNGAGSSSQQNTLRGSVTVVVQRVMPNGLLQVRGEKRLVLNQGEEN 165
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ + G VR D+D++N VS ++A ARI+Y G+G + +P + + +
Sbjct: 166 VRLAGYVRAADIDSNNRVSSQRVANARITYAGRGSLADASQPGMLTRFFNSPW 218
>gi|152980334|ref|YP_001353114.1| FlgH flagellar basal body L-ring protein [Janthinobacterium sp.
Marseille]
gi|151280411|gb|ABR88821.1| FlgH flagellar basal body L-ring protein [Janthinobacterium sp.
Marseille]
Length = 222
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 18/239 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ +++LL GC + P +S + +
Sbjct: 1 MKFKLSALMMFAALLAGCGGMPETVVQTP---------------LTAKPQSASSITPPMN 45
Query: 61 YSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ S+ +F+D RA +GD +T+ I A + S+ ++ F LF
Sbjct: 46 GAIFQTASYRPMFEDRRARLIGDTITITINERSSAGKQAGSSGSKTGTVAAAAPSIFGLF 105
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G T + + + G ++ + V +L NGNL+++G ++V ++
Sbjct: 106 GNVTDNFSASASSASKYEDKGV--VTSGNNFVSTLTVTVIDVLSNGNLVVAGEKQVALDK 163
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P V N VS ++A+ARI Y R + + ++ PL
Sbjct: 164 GGEFIRFSGVVDPATVGPGNVVSSTRVADARIEYRTNARIDAAEVMSMLARFFLSVMPL 222
>gi|121607558|ref|YP_995365.1| flagellar L-ring protein [Verminephrobacter eiseniae EF01-2]
gi|121552198|gb|ABM56347.1| flagellar L-ring protein [Verminephrobacter eiseniae EF01-2]
Length = 249
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 12/226 (5%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
L GC S ++P+ +D + S+
Sbjct: 35 LLLCAGCTS----------LAPVPPPVDILSTTAPALAAAAQGPRPVTGGLFHNASYRPA 84
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN 131
F+D RA VGD +T+ I + A + + R + + + + T +++ L
Sbjct: 85 FEDRRARMVGDSVTIQIVENVTASQKSSSTVDRQSQVSAGVQALPFIGKTLTGKLS--LG 142
Query: 132 YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
SGKG A + I V +L NG+L+++G +++ VN + L +G V
Sbjct: 143 TSADNTFSGKGGTESANTFSGAITTTVVEVLPNGHLVVTGEKQIGVNQNVDVLRFSGTVD 202
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P + + ++ +A R+ G+G TE + ++P
Sbjct: 203 PSALQPGSIIASTLVANVRVESRGRGAQTEAQAMGWLGRFFNTVAP 248
>gi|315930292|gb|EFV09394.1| flagellar L-ring family protein [Campylobacter jejuni subsp. jejuni
305]
Length = 207
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ ++++ SL+ LF D +A+NV D++TV I+
Sbjct: 2 KPPAYVEELAPKQSNNIESAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQAN 61
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNL 152
SR N+ + G +N + +G GS SR E N
Sbjct: 62 KATSRTNTSNLGGGALTGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNT 121
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
I+ V IL NGN I GS+E+ +N E + + ++G++RP D+ N++ IA+A+I
Sbjct: 122 TISTRVIKILSNGNYFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKIL 181
Query: 213 YGGKGRTTELLRPPIGHQLIENLSP 237
Y +G R P G ++IE + P
Sbjct: 182 YKTEGEVDRSTRKPWGSKVIEAIWP 206
>gi|90415315|ref|ZP_01223249.1| flagellar L-ring protein FlgH [marine gamma proteobacterium
HTCC2207]
gi|90332638|gb|EAS47808.1| flagellar L-ring protein FlgH [marine gamma proteobacterium
HTCC2207]
Length = 217
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 35 GSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALN-----VGDILTVDIR 89
+ + T+ + +++ + LF D R+ VGD++TV +
Sbjct: 6 TAPNLMPTAEFAPVQPAPAAPKTQATGAIFNNG-MGLFGDLRSYQGGDLKVGDLVTVLLS 64
Query: 90 IDDQAVFDNQTGRSRNNSLHRKL----SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
QA + SR ++ G+ T + G S G G+
Sbjct: 65 ETTQASRSSDISTSRASTNDVVTEAQKDSVLDKIGRGTGFFSDFKLDGGTVTSDGTGTAD 124
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDK 205
+A L I+A+V +L NGNL+I G +++ + + + V GI+RP D+ N+V +
Sbjct: 125 QAASLTGSISAMVVEVLSNGNLVILGEKQLALTEGSEFIRVKGIIRPADIQPDNTVLSRR 184
Query: 206 IAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
IA A+ISY G G + +P G LI P
Sbjct: 185 IANAQISYRGTGDLAKASKPGWGTGLIFKFWP 216
>gi|317051357|ref|YP_004112473.1| flagellar L-ring protein [Desulfurispirillum indicum S5]
gi|316946441|gb|ADU65917.1| flagellar L-ring protein [Desulfurispirillum indicum S5]
Length = 221
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 50 DFKNSDSTKKSYSLWRDSHAA--LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
+ D + ++ SLW D++ F D +A + DI+TV + A SR++S
Sbjct: 34 EVAPDDRSVQNGSLWSDTNVTSIYFLDQKARRINDIITVRVVESSSASNSGNVATSRDSS 93
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
++ ++ ++ +N + + G + +G G + +A+ + ++ + +L NGN+
Sbjct: 94 VNMGVTSVLG---KERGSLNPAVQANAGNSFAGSGQLQKADNITATVSTRIVKVLNNGNM 150
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
++ G +E+ +++E + L V+G++RP+D+DA N+V +A+A+I Y G G +P
Sbjct: 151 VLRGKREIMIDNEKQMLFVSGVIRPEDIDADNTVMSSALADAQIMYTGSGALAASRKPGW 210
Query: 228 GHQLIENLSP 237
G + + P
Sbjct: 211 GTTFLNTIWP 220
>gi|205355529|ref|ZP_03222300.1| putative flagellar L ring protein precursor [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205346763|gb|EDZ33395.1| putative flagellar L ring protein precursor [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 207
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ ++++ SL+ LF D +A+NV D++TV I+
Sbjct: 2 KPPAYVEELAPKQSNNIESAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQAN 61
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNG-------NLNYDGGGASSGKGSISRAEKLNL 152
SR N+ + G +N + +G GS SR E N
Sbjct: 62 KATSRTNTSNLGGGALTGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNT 121
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
I+ V IL NGN I GS+E+ +N E + + ++G++RP D+ N++ IA+A+I
Sbjct: 122 TISTRVIKILSNGNYFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKIL 181
Query: 213 YGGKGRTTELLRPPIGHQLIENLSP 237
Y +G R P G ++IE + P
Sbjct: 182 YKTEGEVDRSTRKPWGGKVIEAIWP 206
>gi|218513038|ref|ZP_03509878.1| flagellar basal body L-ring protein [Rhizobium etli 8C-3]
Length = 213
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 136/195 (69%), Gaps = 4/195 (2%)
Query: 17 GCH--SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
GC +++SEI P MSP+GS L + P + + K + + YSLW DS AALF+D
Sbjct: 21 GCQSPTAVSEIGRAPAMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFED 79
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+RALNVGDILTVDI+I+D+A FDN+T RSR NS +FG TP+ +L Y
Sbjct: 80 ARALNVGDILTVDIQINDKASFDNETNRSRKNSSGMNWDVNAQIFG-WTPESKTDLTYGS 138
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 139 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 198
Query: 195 VDAHNSVSYDKIAEA 209
V+A N +SYDKIAEA
Sbjct: 199 VNAENQISYDKIAEA 213
>gi|332525063|ref|ZP_08401243.1| flagellar basal-body L-ring protein [Rubrivivax benzoatilyticus
JA2]
gi|332108352|gb|EGJ09576.1| flagellar basal-body L-ring protein [Rubrivivax benzoatilyticus
JA2]
Length = 227
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 3/207 (1%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDD 92
M ++ + + ++++ + LF+D RA GD L V I
Sbjct: 22 MYPTVQFEQPTGADTPPPVVAAEAPSTGAIFQTSQYRPLFEDHRARQAGDTLQVRIVEKI 81
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
A + + + L ++ + T ++ + + +GKGS +
Sbjct: 82 SATAKSTSSLDKTTDLSGGITALPGI-NAATALRRAAVSANSENSFAGKGSTQNSNDFQG 140
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
I V +L NG+L+++G +++ VN + L +G V P+ ++ N V +IA R+
Sbjct: 141 TITVTVRGVLPNGHLLVAGEKQIGVNANVDVLRFSGQVDPRAIEPGNVVQSTRIANVRLE 200
Query: 213 YGGKGRTTELLRPPIGHQ-LIENLSPL 238
G+G + + L PL
Sbjct: 201 QRGRGAQADTNAVGWLSRVFFSVLWPL 227
>gi|148554186|ref|YP_001261768.1| flagellar L-ring protein [Sphingomonas wittichii RW1]
gi|148499376|gb|ABQ67630.1| flagellar L-ring protein [Sphingomonas wittichii RW1]
Length = 227
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 46 FLGIDFKNSDSTKKSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRS 103
+ + ++ + ++++ ++AL +RA +GDI+T+ + QA N
Sbjct: 37 YSPVFAAEPLPSQANGAIYQAANGYSALTNGARAAMIGDIVTITLVERTQAAKSNSASTD 96
Query: 104 RNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILE 163
R+ L G + ++ GG +GKG+ +++ +LN I+ + +
Sbjct: 97 RSGELGLTPPTT----GPLSLFKPTDVGASGGSTFTGKGAAAQSNQLNGEISVSIVRVYP 152
Query: 164 NGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELL 223
NG +++ G + + +N ++ +TG++R D+ N V ++A+ARI+Y GKG
Sbjct: 153 NGTMLVRGEKLLTLNRGDENIAITGLIRAADIGPDNRVPSTRVADARITYSGKGEIARGS 212
Query: 224 RPPIGHQLIENLSP 237
R ++ LSP
Sbjct: 213 RQGWLNRFFSILSP 226
>gi|255605341|ref|XP_002538377.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
gi|223512459|gb|EEF24006.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
Length = 334
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Query: 50 DFKNSDSTKKSYSLWR--DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
+ + +++ D +AAL++ RA VGD LT+ + A T
Sbjct: 148 PAPVAVQPPANGGIFQAGDGYAALYEGMRARRVGDPLTILLVEKTAASKSAGTKLDSGGG 207
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
G + + + G +G G+ +A L+ I+ V A+ NG +
Sbjct: 208 FGLTPPTT----GALSLFKESDASVSGKRNFNGTGTADQANALSGEISVTVAAVYPNGTM 263
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
++ G + V +N + + G+VR D+DA+N V ++A+ARI+Y GKG R
Sbjct: 264 LVQGQKRVTLNRGDEFVQIKGLVRTADIDANNRVLSTRVADARIAYTGKGDVARASRQGW 323
Query: 228 GHQLIENLSP 237
+ +SP
Sbjct: 324 LSRFFSAISP 333
>gi|294013089|ref|YP_003546549.1| flagellar L-ring protein precursor FlgH [Sphingobium japonicum
UT26S]
gi|292676419|dbj|BAI97937.1| flagellar L-ring protein precursor FlgH [Sphingobium japonicum
UT26S]
Length = 219
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 60 SYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S+++ + L +RA +VGDI+T+ + QA N SR+ S+
Sbjct: 42 NGSIFQASMGYTPLTSGARATSVGDIITIVLVERTQATKSNSADTSRDGSIALTPPSTGP 101
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
L + ++ G A +GKG+ +++ LN I + A NG +++ G + + +
Sbjct: 102 LSKIFSAS---DIGSSGSNAFTGKGAATQSNALNGEITVTIAATYPNGTMLVKGEKALTL 158
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + ++G+VR D+ N ++ ++A+A+I Y GKG R + +SP
Sbjct: 159 NRGDEYIQISGLVRQADIGPDNRIASTRVADAKIIYTGKGEIARASRQGWLQRFFSMISP 218
>gi|260774941|ref|ZP_05883842.1| flagellar L-ring protein FlgH [Vibrio coralliilyticus ATCC BAA-450]
gi|260609196|gb|EEX35354.1| flagellar L-ring protein FlgH [Vibrio coralliilyticus ATCC BAA-450]
Length = 259
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 91/246 (36%), Gaps = 27/246 (10%)
Query: 15 LFGCH-------------------------SSISEITGIPQMSPMGSSLDENNRMPFLGI 49
L GC S + + + + +
Sbjct: 13 LSGCSMLEAPIETSDVVQGTTTVDAVEGDKSQDESSGIVDTLRGRTDPVAGDPAWAPIHP 72
Query: 50 DFKNSDSTKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
+ ++ SL+ ++L+ DS+ VGDI+TV + + +A + S+NN
Sbjct: 73 KHQPEHYAAETGSLFNTVQASSLYDDSKPRGVGDIITVTLDENTKAAKSSDADLSKNNDA 132
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
N + N SG + +++ ++ I V +L NGNL+
Sbjct: 133 SMD-PLEVGGQQLNIGDYNFSYNLSNDNKFSGSAAANQSNSISGSITVEVVEVLANGNLV 191
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G + + +N + ++G +RP D+ N+++ ++I+ ARI Y G G ++ P
Sbjct: 192 IRGEKWLTLNTGDEYIRLSGTIRPDDISYENTIASNRISNARIRYSGTGTQQDMQEPGFL 251
Query: 229 HQLIEN 234
+
Sbjct: 252 ARFFNV 257
>gi|87119673|ref|ZP_01075570.1| flagellar L-ring protein FlgH [Marinomonas sp. MED121]
gi|86165149|gb|EAQ66417.1| flagellar L-ring protein FlgH [Marinomonas sp. MED121]
Length = 280
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 6/215 (2%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA-LFKDSRAL 78
+ + E + M ++ I ++ + + +++ F A
Sbjct: 65 AYVPEESDPFNAPDMNYGPRSDDPYYAPVIKYEAQPAQNVTGGIYKVGMGDVFFGSQTAS 124
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
VGDILT+++ + N S+++S + + G
Sbjct: 125 RVGDILTINLSETTSSSKSNDATLSKSSSAEVQNPRVVGTEVNIDSVLPDG-----GTNF 179
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH 198
+G +++ LN I V + NG L I G + V +N + +TGI+R +D+ +
Sbjct: 180 AGSAGANQSNSLNGTITVTVYDVYPNGVLAIRGEKWVTLNRGDEYIRLTGIIRKRDIKPN 239
Query: 199 NSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
N++ ++A+ARI+Y G G +L+
Sbjct: 240 NTIDSSRVADARITYSGSGEIASGSEQGWVTRLLN 274
>gi|82702456|ref|YP_412022.1| flagellar basal body L-ring protein [Nitrosospira multiformis ATCC
25196]
gi|82410521|gb|ABB74630.1| Flagellar L-ring protein [Nitrosospira multiformis ATCC 25196]
Length = 230
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 21/237 (8%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R + L GC S + P + + + + +
Sbjct: 12 RVLGFMTGVPLALSGCVS----------LPPPAPIVHQP-----MSARAALPAPPPGNGA 56
Query: 63 LWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+++D + +LF D RA +GD L + + A + + ++N + +
Sbjct: 57 VYQDANQYHSLFIDRRARQIGDTLVILLTERTNASKRSNSSANKNGDVSFGIPPIVFGVP 116
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+L +GKG + A + I V +L N L++SG +++ +
Sbjct: 117 ITKKI---DLGASSSNDFAGKGEAASANNFSGTITVTVVDVLPNSYLVVSGEKQLAMTQG 173
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+VRP+ V N+VS ++A+ARI Y G E + ++P
Sbjct: 174 SEYIRFSGVVRPETV-ISNTVSSIQVADARIEYKANGYIDEAQTMGWLSRFFLTVAP 229
>gi|237752556|ref|ZP_04583036.1| flagellar basal body L-ring protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376045|gb|EEO26136.1| flagellar basal body L-ring protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 235
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 16/220 (7%)
Query: 28 IPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVD 87
PQ+S + E + D+ S++ LF D RA+ + D++TV
Sbjct: 21 EPQISFKPPAYVEE------LPPKEEEDNFGNPGSIFGRGDNLLFSDRRAMQLNDLVTVI 74
Query: 88 IRIDDQAVFDNQTGRSRNNSLHRKLSGG-FSLFGQQTPQMNGNLNY---------DGGGA 137
I QA + ++ G F Q + LN
Sbjct: 75 INQTAQATSTANKNLNETSNATLTGPGITFGGPSQTIGNITNQLNNITGFGISTGQNTST 134
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
G GS +R E IAA + +L+NGN I GS+EV +N E + ++++G+VRP D+
Sbjct: 135 FQGAGSQNRQEAFTTTIAARIIKVLQNGNYFIEGSREVLINGEKQVIHLSGVVRPNDIAR 194
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N++ IA+A+I Y +G G +L+E++ P
Sbjct: 195 DNTIESRFIADAKIMYDTQGELKRNTEKGWGTKLLESVWP 234
>gi|149194488|ref|ZP_01871584.1| flagellar L-ring protein precursor H [Caminibacter mediatlanticus
TB-2]
gi|149135232|gb|EDM23712.1| flagellar L-ring protein precursor H [Caminibacter mediatlanticus
TB-2]
Length = 235
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 23/247 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R ++ GC + PM ++ + K D+ +
Sbjct: 1 MKREITLLFPLI-FYVGCATH-----------PMDPTITMTPPKYVEEMPSKTQDNIQNP 48
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRI----DDQAVFD-NQTGRSRNNSLHRKLSGG 115
SL+ + LF D++A V D++TV I QA N+ L +SG
Sbjct: 49 GSLFTNG-DNLFSDTKAKKVNDVVTVLITEQIKQSSQASKKLNEANTDAGGILDASISGS 107
Query: 116 FSLFGQQTPQMNGNLNYD-----GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G++ ++ + G GS R E+ I+A + IL NGN I
Sbjct: 108 AYFGGREEKLAKTGISLNLPSMNSNRTFQGSGSQQRNEQFQTTISARIVKILANGNYYIY 167
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++E+ V+ + + + ++G++RP+D+ N++ IA+A+I+Y +G +
Sbjct: 168 GTREIYVDGQKQIIKISGVIRPEDISPDNTIDSKYIADAKIAYETEGDIKRYTEQNWFAK 227
Query: 231 LIENLSP 237
+ P
Sbjct: 228 FWSAIVP 234
>gi|296274398|ref|YP_003657029.1| flagellar L-ring protein [Arcobacter nitrofigilis DSM 7299]
gi|296098572|gb|ADG94522.1| flagellar L-ring protein [Arcobacter nitrofigilis DSM 7299]
Length = 237
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M F++L + LL C P+ L P + T
Sbjct: 1 MRSKYFLILACAFLLNSCA-------------PVEQELKF--DKPPAQVLKPKPKVTYNK 45
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ +LF D + L VGDI+ V I + N+ + ++ G
Sbjct: 46 GSLYSRKGPSLFADKKDLQVGDIIQVVIDESLTSNTSNKRELTNTSAETMGGGVISPATG 105
Query: 121 QQTPQMNG--------------NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
P + N + + GK + E + ++ I+ +NGN
Sbjct: 106 NNLPLNSTVQSVANKINSIGGVQFNSNSNSSFKGKVKANADESFSTTLSVIIEETYQNGN 165
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
I GS+E+ ++++ + + ++G++RP D+ NS+ +IA ++ Y G +++ P
Sbjct: 166 YYIKGSKEMLIDEQKQEIIISGVIRPYDISPDNSIKSSQIANLKVLYKKDGEEQDVMHQP 225
Query: 227 IGHQLIENLSP 237
G +L++ L P
Sbjct: 226 WGTKLLKMLWP 236
>gi|134095094|ref|YP_001100169.1| basal-body outer-membrane L (lipopolysaccharide layer) ring protein
[Herminiimonas arsenicoxydans]
gi|166214821|sp|A4G6A8|FLGH_HERAR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|133738997|emb|CAL62045.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Herminiimonas arsenicoxydans]
Length = 223
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 96/240 (40%), Gaps = 19/240 (7%)
Query: 1 MYRYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + ++ S LL C I P ++ +
Sbjct: 1 MKKSLMALIVVGSFLLSACALRPDTIVNTP---------------LTARPQAASTIAPPA 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ ++++ + + +F+D RA +GD +T+ I A + S+ S+ F L
Sbjct: 46 NGAIFQAAAYRPMFEDRRARLIGDTITIVINEKSSAGKQAGSAASKTGSVTASAPNVFGL 105
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
G T +++ + + G +++ + + V +L NGNLI++G ++V ++
Sbjct: 106 LGSLTNRLSASGSNAIKYEDKG--AVTSSNNFISTMTVTVIDVLSNGNLIVAGEKQVSLD 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P V++ N VS ++A+A+I Y + + ++ PL
Sbjct: 164 KGSEFIRFSGVVDPSTVNSGNIVSSTQVADAKIEYRTNSTVDGAEVASMLARFFLSVLPL 223
>gi|32490793|ref|NP_871047.1| flagellar basal body L-ring protein [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31076694|sp|Q8D3F7|FLGH_WIGBR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|25165999|dbj|BAC24190.1| flgH [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 228
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 10/237 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ + + + LL C + + + + ++ +F N ++
Sbjct: 1 MHYLRYFAIAFLLLLSSCSVTRHKPLIEGSTTTIPNT---------PSSNFINGSIFQQD 51
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ + LF+D R N+GDILTV ++ + A + + SR ++ + +++ +
Sbjct: 52 NSLY-YGYQPLFEDRRPKNIGDILTVLLQENVSASKSSSSNASRKSNANLEMNALPKIIN 110
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ + + + +GKG S A + I V IL NGNL + G +++ +N
Sbjct: 111 KIIGNDQLSTDINSNNGFNGKGGSSAANTFSGTITVTVIDILTNGNLKVIGEKKISINQG 170
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
S+ GIV P+ +D +N V + I++++I Y G G E+ + +L N P
Sbjct: 171 TESIRFYGIVNPKTIDHNNQVMSNLISDSKIEYIGDGYINEVQKMNWLQRLFLNYFP 227
>gi|149184210|ref|ZP_01862528.1| flagellar L-ring protein [Erythrobacter sp. SD-21]
gi|148831530|gb|EDL49963.1| flagellar L-ring protein [Erythrobacter sp. SD-21]
Length = 217
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 24/238 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +F +L L C++ S L + + ++
Sbjct: 1 MKSAFCLLPIVLGLAACNAH---------------SARPAGYSAALPPASETAAVRHENG 45
Query: 62 SLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ +A L+ +RA VGD++T+ + Q R+ S L
Sbjct: 46 AIFQASQGYAPLYYGNRAARVGDLVTIVLVERTQTSKSTSGSTKRDGSFGLSLPT----- 100
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + +LN GGG+ G G S+A + + + + NG ++ G + + ++
Sbjct: 101 --WSGIDSADLNASGGGSFKGSGDASQASSIRADLTVTIAEVRPNGTALVRGEKVMELSQ 158
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++GI+R D+D N + ++A+ARISY G G R + +SP
Sbjct: 159 GTEWVQLSGIIRLADIDQDNRIPSIRVADARISYSGAGSVQRASREGWLSRFFGVISP 216
>gi|262273525|ref|ZP_06051339.1| flagellar L-ring protein FlgH [Grimontia hollisae CIP 101886]
gi|262222503|gb|EEY73814.1| flagellar L-ring protein FlgH [Grimontia hollisae CIP 101886]
Length = 186
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 50 DFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
+ L+ ++ ALF+D RA VGDILT+ + ++ T +++ +
Sbjct: 1 MDMPVYTPDPDGGLFNANYSMALFQDRRAFRVGDILTITLDEQTRSSKKAGTSFDKSSDV 60
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
+ F T G ++ G SG S S+ L+ I +V ++ NG L
Sbjct: 61 SMGVPTLFG-----TSYPQGEVSVSGSRDFSGASSSSQQNSLSGSITVMVDEVMPNGVLR 115
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
+ G + +R+N + ++G+VR D+D +N VS ++ +ARI+Y G+G +
Sbjct: 116 VRGEKWLRLNQGDEFIRLSGLVRVDDIDGNNQVSSQRLGDARITYSGRGALADANEAGWL 175
Query: 229 HQLIENLS 236
+ +
Sbjct: 176 TRFFNSSW 183
>gi|296282276|ref|ZP_06860274.1| flagellar L-ring protein precursor FlgH [Citromicrobium
bathyomarinum JL354]
Length = 223
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 91/239 (38%), Gaps = 19/239 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + L C + P ++ + G
Sbjct: 1 MNIRILLAIPLAMSLAACAGDTRPAGFSATLPPPPAAPMQQVAAVTYG----------ND 50
Query: 61 YSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
++++ +A L+ +RA VGD++T+ + R+ + L
Sbjct: 51 GAIYQASQGYAPLYNGTRAARVGDLVTIVLIERTSTTKATSGKTQRDGNAGLDLP----- 105
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
P G+LN + +G G+ ++ L + + + NG ++ G + + +
Sbjct: 106 --DFIPVDPGDLNASAAASFTGAGNAAQTSSLRGDLTVTIAEVRPNGTALVRGEKVMNFS 163
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ ++GI+R D+DA N ++ ++A+A+I+Y GKG +P + +SP
Sbjct: 164 QGEEWVQLSGIIRLSDIDADNRIASIRVADAQIAYSGKGAVQRAGKPGWLSRFFSIVSP 222
>gi|220932492|ref|YP_002509400.1| flagellar L-ring protein [Halothermothrix orenii H 168]
gi|219993802|gb|ACL70405.1| flagellar L-ring protein [Halothermothrix orenii H 168]
Length = 192
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 54 SDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ + SLW D A++++D + VGD++TV I + AV T S+ +++
Sbjct: 17 PLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQSANTSTSQESNIDAG-- 74
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
G + G R+ + + + IL GN I G +
Sbjct: 75 -----PGLGIFDFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPGGNFRIVGRK 129
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+++N E + + ++GI+RP+DV N+V K+AEA I + G+G TE +P + +++
Sbjct: 130 TIKINGEEQYIKLSGIIRPEDVTLDNTVLSTKVAEASIEFEGEGIVTEKQKPGLFERIMN 189
Query: 234 NLS 236
+
Sbjct: 190 WIF 192
>gi|33596142|ref|NP_883785.1| flagellar basal body L-ring protein [Bordetella parapertussis
12822]
gi|81427445|sp|Q7WA92|FLGH_BORPA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|33573145|emb|CAE36793.1| flagellar L-ring protein precursor [Bordetella parapertussis]
Length = 230
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 4/208 (1%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAALFKDSRALNVGDILTVDIR 89
M S + + S+++ + LF+D R NVGDI+T+ +
Sbjct: 23 AMIPPEPVVTGPLTAPPPPPPQPSARPNGSIYQPSAYGNYPLFEDRRPRNVGDIVTIVLE 82
Query: 90 IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
A T SR+ S ++ + + GG ++G G S
Sbjct: 83 EKTNAAKGVATNTSRDGSATLGVAAAPRFMDGVIND-KLDTDISGGNTANGTGKSSANNT 141
Query: 150 LNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEA 209
I V +L NGNL I+G +++ +N + +G+V P+ + N+VS ++A+A
Sbjct: 142 FTGTITTTVIGVLPNGNLQIAGEKQIAINRGSEYVRFSGVVDPRSITGSNTVSSTRVADA 201
Query: 210 RISYGGKGRTTELLRPPIGHQLIENLSP 237
RI Y KG E+ + SP
Sbjct: 202 RIEYRSKGVMDEVQTMGWLQRFFLIASP 229
>gi|167567753|ref|ZP_02360669.1| flagellar basal body L-ring protein [Burkholderia oklahomensis
EO147]
gi|167574704|ref|ZP_02367578.1| flagellar basal body L-ring protein [Burkholderia oklahomensis
C6786]
Length = 219
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 7/199 (3%)
Query: 39 DENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ F + + ++ ++ A +L D RA GD LTV + QA
Sbjct: 24 PRPDFADDDLPPFATAPAAGRAGGVFNPVSAWSLASDGRAYRPGDTLTVVLEETTQASKR 83
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
T + K F + + + +G G+ S+ L I I
Sbjct: 84 ADTRFGKKGDFEFKPGMLFGNP------LTFDSSVGVKRDFNGSGTSSQQNTLRGEITVI 137
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V ++ G L + G + + +N + +TG VRP D+D +N VS +IA ARI Y GKG
Sbjct: 138 VHQVMAGGLLQVKGEKVLALNQGEEIMRLTGYVRPADIDTNNRVSSRRIANARIKYVGKG 197
Query: 218 RTTELLRPPIGHQLIENLS 236
++ +
Sbjct: 198 ALSDSNAAGWLTRFFNGPW 216
>gi|307293784|ref|ZP_07573628.1| flagellar L-ring protein [Sphingobium chlorophenolicum L-1]
gi|306879935|gb|EFN11152.1| flagellar L-ring protein [Sphingobium chlorophenolicum L-1]
Length = 218
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 60 SYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S+++ + L +RA +VGDI+T+ + QA N SR+ S+
Sbjct: 41 NGSIFQASMGYTPLTSGARATSVGDIITIVLVERTQATKSNSADTSRDGSIALTPPSTGP 100
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
L + ++ G A +GKG+ +++ LN I + A NG +++ G + + +
Sbjct: 101 LSKLFSAS---DIGSSGSNAFTGKGAATQSNALNGEITVTIAATYPNGTMLVKGEKALTL 157
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + ++G+VR D+ N ++ ++A+A+I Y GKG R + +SP
Sbjct: 158 NRGDEFIQISGLVRQADIGPDNRIASTRVADAKIIYTGKGEIARASRQGWLQRFFSMISP 217
>gi|33601544|ref|NP_889104.1| flagellar basal body L-ring protein [Bordetella bronchiseptica
RB50]
gi|81431030|sp|Q7WJD2|FLGH_BORBR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|33575980|emb|CAE33059.1| flagellar L-ring protein precursor [Bordetella bronchiseptica RB50]
Length = 230
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 4/208 (1%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAALFKDSRALNVGDILTVDIR 89
M S + + S+++ + LF+D R NVGDI+T+ +
Sbjct: 23 AMIPPEPVVTGPLTAPPPPPPQPSARPNGSIYQPSAYGNYPLFEDRRPRNVGDIVTIVLE 82
Query: 90 IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
A T SR+ S ++ + + GG ++G G S
Sbjct: 83 EKTNAAKGVATNTSRDGSATLGVAAAPRFMDGIIND-KLDTDISGGNTANGTGKSSANNT 141
Query: 150 LNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEA 209
I V +L NGNL I+G +++ +N + +G+V P+ + N+VS ++A+A
Sbjct: 142 FTGTITTTVIGVLPNGNLQIAGEKQIAINRGSEYVRFSGVVDPRSITGSNTVSSTRVADA 201
Query: 210 RISYGGKGRTTELLRPPIGHQLIENLSP 237
RI Y KG E+ + SP
Sbjct: 202 RIEYRSKGVMDEVQTMGWLQRFFLIASP 229
>gi|262276414|ref|ZP_06054223.1| flagellar L-ring protein FlgH [Grimontia hollisae CIP 101886]
gi|262220222|gb|EEY71538.1| flagellar L-ring protein FlgH [Grimontia hollisae CIP 101886]
Length = 263
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 21 SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD-SHAALFKDSRALN 79
+ G P +P+ + T + SL+ S L+ D++ +
Sbjct: 61 REDPVAGDPSWAPLYPVRQPEHY-------------TTATGSLFSAVSAQDLYDDTKPRS 107
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
+GDI+TV + QA + ++++ L + N + ++S
Sbjct: 108 IGDIVTVMLEEKTQAKKSASSDAAKSSDLSMD-PLELGGEEITIGERNLSYAAAHDNSTS 166
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
G S ++ ++ I+ V ++ NGNL+I G + + +N + ++G +RP D+ N
Sbjct: 167 GSTSADQSNSISGSISVEVVDVMSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDITPEN 226
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+++ +I+ ARI Y G G + + +
Sbjct: 227 TIASTRISNARIQYSGTGDRQDTQDQGFLARFFNVVL 263
>gi|163783623|ref|ZP_02178612.1| flagellar L-ring protein FlgH [Hydrogenivirga sp. 128-5-R1-1]
gi|159881116|gb|EDP74631.1| flagellar L-ring protein FlgH [Hydrogenivirga sp. 128-5-R1-1]
Length = 208
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 3/202 (1%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
D K SL+ L+ ++RA GD++ + + AV
Sbjct: 8 PKDLKTYEKENPFPQDEYKQEKSMGSLFAGGGWTDLYGENRATKPGDLIFIYVVESINAV 67
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
++ + +S F + + + + L +A
Sbjct: 68 ESLSNQAGKSTAFSNAISSFFGVPQNTLANLGSGAEGKFNT--KASSKVQQTGTLTTKLA 125
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V + N ++I + + VN R + GI+RP+D+D+ N+V DKIA I G
Sbjct: 126 GRVVKVYPNRTMLIEAKKYIMVNGMKREFILRGIIRPEDIDSTNTVPSDKIANMEIFLDG 185
Query: 216 KGRTTELLRPPIGHQLIENLSP 237
KG E +P ++ + P
Sbjct: 186 KGYMAEGGKPGWLARIFAVIFP 207
>gi|33592482|ref|NP_880126.1| flagellar basal body L-ring protein [Bordetella pertussis Tohama I]
gi|81425268|sp|Q7VYG3|FLGH_BORPE RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|33572128|emb|CAE41670.1| flagellar L-ring protein precursor [Bordetella pertussis Tohama I]
gi|332381899|gb|AEE66746.1| flagellar basal body L-ring protein [Bordetella pertussis CS]
Length = 229
Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 4/208 (1%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAALFKDSRALNVGDILTVDIR 89
M S + + S+++ + LF+D R NVGDI+T+ +
Sbjct: 22 AMIPPEPVVICPLTAPPPSPPQPSARPNGSIYQPSAYGNYPLFEDRRPRNVGDIVTIVLE 81
Query: 90 IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
A T SR+ S ++ + + GG ++G G S
Sbjct: 82 EKTNAAKGVATNTSRDGSATLGVAAAPRFMDGIIND-KLDTDISGGNTANGTGKSSANNT 140
Query: 150 LNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEA 209
I V +L NGNL I+G +++ +N + +G+V P+ + N+VS ++A+A
Sbjct: 141 FTGTITTTVIGVLPNGNLQIAGEKQIAINRGSEYVRFSGVVDPRSITGSNTVSSTRVADA 200
Query: 210 RISYGGKGRTTELLRPPIGHQLIENLSP 237
RI Y KG E+ + SP
Sbjct: 201 RIEYRSKGVMDEVQTMGWLQRFFLIASP 228
>gi|254255090|ref|ZP_04948407.1| Flagellar basal body L-ring protein [Burkholderia dolosa AUO158]
gi|124899735|gb|EAY71578.1| Flagellar basal body L-ring protein [Burkholderia dolosa AUO158]
Length = 222
Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 7/202 (3%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQA 94
+ F + + A +L D RA GD+LTV+++ QA
Sbjct: 24 PGRMPADDDAFDMPAAAFEVRRGTAGGVVVPDQAWSLTSDVRAFRAGDVLTVELQESTQA 83
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ T +N S+ K + G + G GS S+ L +
Sbjct: 84 SKKSGTQIGKNGSVSVKQPNLMGSL------LPIEAELGGKRSFDGSGSSSQQNTLRGSV 137
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
IV ++ NG L + G + + +N ++ + G VR D+DA+N VS ++A+ARI Y
Sbjct: 138 TVIVQRVMPNGLLQVRGEKRLVLNQGEETVRLAGYVRAADIDANNRVSSQRVADARIRYS 197
Query: 215 GKGRTTELLRPPIGHQLIENLS 236
G+G + +P + +
Sbjct: 198 GRGSLADANQPGWLTRFFNSRW 219
>gi|260767766|ref|ZP_05876701.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
gi|260617275|gb|EEX42459.1| flagellar L-ring protein FlgH [Vibrio furnissii CIP 102972]
gi|315179402|gb|ADT86316.1| flagellar L-ring protein FlgH [Vibrio furnissii NCTC 11218]
Length = 259
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 87/246 (35%), Gaps = 27/246 (10%)
Query: 15 LFGCHSSISEI----------------------TGIPQMSPMGSSLDENNRMPFLGIDFK 52
L GC I + + + + D P +
Sbjct: 13 LSGCSLLPEPIETADVTQGTTVVDAVEGDKSSDSSTGLVDTLRNRTDPVAGDPAWAPIYP 72
Query: 53 NSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
++ SL+ +L+ DS+ +GDI+TV + +A + N
Sbjct: 73 KDKPEHYAAETGSLFNLSRANSLYDDSKPRGIGDIITVTLNESTKAAKSADADLKKKNDA 132
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
+ N + SG +++ L+ I V IL NGNL+
Sbjct: 133 SMDPLSVGGQELN-LGEYNFSYALKNDNKFSGSAQANQSNSLSGSITVEVIDILSNGNLV 191
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G ++ P
Sbjct: 192 IRGEKWLSLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTGTNQDMQEPGFL 251
Query: 229 HQLIEN 234
+
Sbjct: 252 ARFFNV 257
>gi|317406198|gb|EFV86447.1| flagellar basal-body L-ring protein FlgH [Achromobacter
xylosoxidans C54]
Length = 230
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 18/237 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ L+ GC M + + + S+
Sbjct: 8 RLVSSAALALLVAGCA--------------MIPPEPIVTGPTTAAPPPPPMPAAQPTGSI 53
Query: 64 WRD---SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
++ + LF+D R NVGDI+T+ + A + T +R+ S ++ S
Sbjct: 54 YQPTTYGNYPLFEDRRPRNVGDIVTIVLNEKTNASKNVATNTNRSGSASLGITAAPSFMD 113
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
N N + GG + GKG + I V ++ NGNL ++G +++ +N
Sbjct: 114 SW-ANANLNTDAKGGNVAQGKGDSTANNAFTGTITTTVVGVMSNGNLQVAGEKQIAINRG 172
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ +G+V P+ + N+VS ++A+ARI Y KG E+ + SP
Sbjct: 173 SEYVRFSGVVDPRSITGTNTVSSTQVADARIEYRSKGVMDEVQTMGWLQRFFLIASP 229
>gi|261885251|ref|ZP_06009290.1| flagellar basal body L-ring protein [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 208
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 40 ENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
E +N SL+ LF D +A+NV DI+TV I+
Sbjct: 2 EPPAYVEQLPSKENGIGVSSPGSLFGRGDNPLFSDRKAMNVNDIVTVVIQETANQTSKAD 61
Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLN--------YDGGGASSGKGSISRAEKLN 151
++++ + + ++N G SG G+ +R E N
Sbjct: 62 KTTKKDSTTSLSGGTFTTPANSALSGIANDINKISGIGFSAGGANNYSGSGTSTRNETFN 121
Query: 152 LLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARI 211
++A + IL NGN I GS+E+ +N+E + + ++G++RP D+ +N + I++A+I
Sbjct: 122 TTVSARIIKILNNGNYFIEGSKEILINNEKQIMQISGVIRPYDISQNNQIESRYISDAKI 181
Query: 212 SYGGKGRTTELLRPPIGHQLIENLSP 237
Y +G P G +++E + P
Sbjct: 182 LYKTEGDLQRATSKPWGTKVLETIWP 207
>gi|332531621|ref|ZP_08407518.1| flagellar L-ring protein [Hylemonella gracilis ATCC 19624]
gi|332038984|gb|EGI75413.1| flagellar L-ring protein [Hylemonella gracilis ATCC 19624]
Length = 238
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 14/234 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
+ + LL GC + + + +P ++ + S SL+
Sbjct: 17 ALSFALGAVLLAGCTVTAPQPAKVDFATPTMAAYPSQTI-----------PAGPASGSLF 65
Query: 65 RDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ + + F+D RA VGD +T+ I + A + + +R+ S+ ++ L G
Sbjct: 66 QSATYRVGFEDRRARQVGDTVTIRIVENVSASQQSSSTANRSGSISGGITAVPGLSGGTL 125
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
+ ++ + SGKG S + I IV+ +L NG+L++ G +++ +N +
Sbjct: 126 GKF--DIGAENKSDFSGKGGTSATNTFSGSITTIVSEVLPNGHLVVVGEKQIGLNQNVDV 183
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
L TG V P + + V +A R+ G+G E + LSP
Sbjct: 184 LRFTGTVDPLAIQPGSVVLSTNVANVRVESRGRGPQYEAQTVGWLTRFFHTLSP 237
>gi|262170828|ref|ZP_06038506.1| flagellar L-ring protein FlgH [Vibrio mimicus MB-451]
gi|261891904|gb|EEY37890.1| flagellar L-ring protein FlgH [Vibrio mimicus MB-451]
Length = 258
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSF--------------IVLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 1 MKRLLASSLLILLSGCSLMQAPIESAETIQGTTTVDAVEGDKSESNTGLTDALRNRTDPV 60
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P + + ++ SL+ + +++ DS+ VGDI+TV + +A
Sbjct: 61 ADDPAWAPIYPKAKPDHYAAETGSLFNLANANSMYDDSKPRGVGDIITVTLNESTKAAKS 120
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ N N + +G + +++ ++ I
Sbjct: 121 ADADLKKKNDASMD-PLAVGGKDLTVGDYNFSYALKNDNKFTGSAAANQSNSMSGSITVE 179
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 180 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 239
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 240 TNQDMQEPGFLARFFNV 256
>gi|103488390|ref|YP_617951.1| flagellar L-ring protein [Sphingopyxis alaskensis RB2256]
gi|98978467|gb|ABF54618.1| flagellar L-ring protein [Sphingopyxis alaskensis RB2256]
Length = 219
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 4/199 (2%)
Query: 39 DENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDN 98
D+ F + S+++ ++ L RA VGDILT+ + A N
Sbjct: 24 DKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGGRAGQVGDILTIQLVERTAATKSN 83
Query: 99 QTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIV 158
G R+ + G + ++ GG GKG S++ L+ ++ V
Sbjct: 84 AAGTQRDGDIGLSPPTT----GPLSFFNPSDIGMGGGQQFKGKGEASQSNALSGEVSVTV 139
Query: 159 TAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGR 218
A+ NG +++ G + + +N + ++GIVR D+ N + ++A A I Y GKG
Sbjct: 140 AAVYPNGTMLVKGEKFLTLNRGDERVQISGIVRAIDISPDNRILSTRVANATIRYVGKGE 199
Query: 219 TTELLRPPIGHQLIENLSP 237
R + +SP
Sbjct: 200 IARASRQGWLQRFFSMISP 218
>gi|262166279|ref|ZP_06034016.1| flagellar L-ring protein FlgH [Vibrio mimicus VM223]
gi|262025995|gb|EEY44663.1| flagellar L-ring protein FlgH [Vibrio mimicus VM223]
Length = 258
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSF--------------IVLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 1 MKRLLASSLLILLSGCSLMQAPIESAETIQGTTTVDAVEGDKSESNTGLTDALRNRTDPV 60
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P + + ++ SL+ + +++ DS+ VGDI+TV + +A
Sbjct: 61 ADDPAWAPIYPKAKPDHYAAETGSLFNLANVNSMYDDSKPRGVGDIITVTLNESTKAAKS 120
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ N N + +G + +++ ++ I
Sbjct: 121 ADADLKKKNDSKMD-PLAVGGKDLTVGDYNFSYALKNDNKFTGSAAANQSNSMSGSITVE 179
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 180 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 239
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 240 TNQDMQEPGFLARFFNV 256
>gi|213613178|ref|ZP_03371004.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 216
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 14/226 (6%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 1 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 50
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 110
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 111 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 170
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTEL 222
+N + +G+V P+ + NSV ++A+ARI Y G G E
Sbjct: 171 INQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEA 216
>gi|258621052|ref|ZP_05716086.1| flagellar L-ring protein precursor [Vibrio mimicus VM573]
gi|258625280|ref|ZP_05720188.1| flagellar L-ring protein precursor [Vibrio mimicus VM603]
gi|258582453|gb|EEW07294.1| flagellar L-ring protein precursor [Vibrio mimicus VM603]
gi|258586440|gb|EEW11155.1| flagellar L-ring protein precursor [Vibrio mimicus VM573]
Length = 261
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSF--------------IVLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 4 MKRLLASSLLILLSGCSLMQAPIESAETIQGTTTVDAVEGDKSESNTGLTDALRNRTDPV 63
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P + + ++ SL+ + +++ DS+ VGDI+TV + +A
Sbjct: 64 ADDPAWAPIYPKAKPDHYAAETGSLFNLANVNSMYDDSKPRGVGDIITVTLNESTKAAKS 123
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
+ N N + +G + +++ ++ I
Sbjct: 124 ADADLKKKNDASMD-PLAVGGKDLTVGDYNFSYALKNDNKFTGSAAANQSNSMSGSITVE 182
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 183 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 242
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 243 TNQDMQEPGFLARFFNV 259
>gi|121997316|ref|YP_001002103.1| flagellar L-ring protein [Halorhodospira halophila SL1]
gi|121588721|gb|ABM61301.1| flagellar L-ring protein [Halorhodospira halophila SL1]
Length = 228
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 1/220 (0%)
Query: 14 LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFK 73
L+ GC +++ +P+ E + + +D + + + LF+
Sbjct: 7 LIRGCAAALVAGVAAAACTPLPQEAPEPSPITAPRVDVPDDPDERTGSVFDEERSMRLFE 66
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYD 133
D A GD++TV I + + +R + + +
Sbjct: 67 DRSARRTGDLITVVIEEEIAGDRSINSEMARQQEADMPAPQIGGEDLEIFGR-PFAFEQE 125
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
G + G GS + L I A+V NG+L+I G + VRV+ +L ++GIVR
Sbjct: 126 GEASFEGGGSADQETNLTGTINAVVVDTTPNGHLVIRGEKNVRVSQGQETLRISGIVRTD 185
Query: 194 DVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
DV A+N VS +++A ++ Y G+ ++ +P + +
Sbjct: 186 DVGANNEVSSNRVANMQVGYTGEEALSDSAQPGWLTRFLM 225
>gi|255747107|ref|ZP_05421052.1| flagellar L-ring protein FlgH [Vibrio cholera CIRS 101]
gi|262161349|ref|ZP_06030459.1| flagellar L-ring protein FlgH [Vibrio cholerae INDRE 91/1]
gi|262167780|ref|ZP_06035482.1| flagellar L-ring protein FlgH [Vibrio cholerae RC27]
gi|262191686|ref|ZP_06049862.1| flagellar L-ring protein FlgH [Vibrio cholerae CT 5369-93]
gi|31077183|sp|Q9KQ13|FLGH_VIBCH RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|255735509|gb|EET90909.1| flagellar L-ring protein FlgH [Vibrio cholera CIRS 101]
gi|262023845|gb|EEY42544.1| flagellar L-ring protein FlgH [Vibrio cholerae RC27]
gi|262028660|gb|EEY47314.1| flagellar L-ring protein FlgH [Vibrio cholerae INDRE 91/1]
gi|262032425|gb|EEY50987.1| flagellar L-ring protein FlgH [Vibrio cholerae CT 5369-93]
gi|327484713|gb|AEA79120.1| Flagellar L-ring protein FlgH [Vibrio cholerae LMA3894-4]
Length = 258
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSFI--------------VLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 1 MKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPV 60
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P ++ SL+ S ++++ DS+ VGDI+TV + +A
Sbjct: 61 AGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKS 120
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ N N + SG + +++ ++ I
Sbjct: 121 ADADLNKKNDASMD-PLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITVE 179
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 180 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 239
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 240 TNQDMQEPGFLARFFNV 256
>gi|239993576|ref|ZP_04714100.1| flagellar L-ring protein [Alteromonas macleodii ATCC 27126]
Length = 249
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 93/249 (37%), Gaps = 15/249 (6%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPF------------L 47
M R L L GC ++++ + Q SP ++ + P
Sbjct: 1 MKVRCHIHTLIAIFTLGGCAQTLTDEEQVVQSSPTNPNVSQRAVKPVEEEPSPGDPRYSP 60
Query: 48 GIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
S + SL+ H+ L++ + VGD++ V + Q+ +N
Sbjct: 61 PRMEPTSTLHVPTGSLFNPEHSVGLYERHASFKVGDMILVKLEEQTQSEKSLDFNTDKNT 120
Query: 107 SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
S + G + + + + ++ + ++ ++ I VT I GN
Sbjct: 121 SFDLS-PVTLKVGGIRIDEDDVEVEHEQDSEFASSAKTKQSNSMSGSITVYVTGITPAGN 179
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
L+++G + + +N + +G VR +DVD N+V K+ A I Y G G + +
Sbjct: 180 LLVTGEKWITMNRGKEYIRFSGEVRKKDVDESNTVLSSKVGNALIEYSGTGELQDNQQRT 239
Query: 227 IGHQLIENL 235
+ +L
Sbjct: 240 VIGKLFSIF 248
>gi|91776312|ref|YP_546068.1| flagellar L-ring protein [Methylobacillus flagellatus KT]
gi|122399643|sp|Q1GZW0|FLGH_METFK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|91710299|gb|ABE50227.1| flagellar L-ring protein [Methylobacillus flagellatus KT]
Length = 222
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 42 NRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQT 100
++P S + S ++ + + L +D RA VGD + ++I + A
Sbjct: 30 TQVPNTARPAAPSQAVYNSGGIYSPATYRPLLEDKRARLVGDTIVINITENTSATKSGSN 89
Query: 101 GRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTA 160
S++ +++ ++G F + N A + + I+A VT
Sbjct: 90 SASKSGAVNAGITGLFG-----HNVPKASFNAASDNAYDDAAASNSRNVFTGTISATVTE 144
Query: 161 ILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTT 220
+L NG+L++SG ++V + + +G+V P V A NSV ++A+ARI Y
Sbjct: 145 VLPNGHLVVSGEKQVAFDRGTEFVRFSGVVDPMYVAAGNSVPSSRVADARIEYRTNSNLD 204
Query: 221 ELLRPPIGHQLIENLSPL 238
I + + +PL
Sbjct: 205 TAQVMSILTRFFLSFAPL 222
>gi|15642193|ref|NP_231825.1| flagellar basal body L-ring protein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121586244|ref|ZP_01676034.1| flagellar L-ring protein FlgH [Vibrio cholerae 2740-80]
gi|121726527|ref|ZP_01679776.1| flagellar L-ring protein FlgH [Vibrio cholerae V52]
gi|147674828|ref|YP_001217711.1| flagellar basal body L-ring protein [Vibrio cholerae O395]
gi|153213603|ref|ZP_01948876.1| flagellar L-ring protein FlgH [Vibrio cholerae 1587]
gi|153817116|ref|ZP_01969783.1| flagellar L-ring protein FlgH [Vibrio cholerae NCTC 8457]
gi|153820847|ref|ZP_01973514.1| flagellar L-ring protein FlgH [Vibrio cholerae B33]
gi|153829344|ref|ZP_01982011.1| flagellar L-ring protein FlgH [Vibrio cholerae 623-39]
gi|183179568|ref|ZP_02957779.1| flagellar L-ring protein FlgH [Vibrio cholerae MZO-3]
gi|227082318|ref|YP_002810869.1| flagellar L-ring protein FlgH [Vibrio cholerae M66-2]
gi|229507729|ref|ZP_04397234.1| flagellar L-ring protein FlgH [Vibrio cholerae BX 330286]
gi|229512076|ref|ZP_04401555.1| flagellar L-ring protein FlgH [Vibrio cholerae B33]
gi|229513838|ref|ZP_04403300.1| flagellar L-ring protein FlgH [Vibrio cholerae TMA 21]
gi|229519212|ref|ZP_04408655.1| flagellar L-ring protein FlgH [Vibrio cholerae RC9]
gi|229522143|ref|ZP_04411560.1| flagellar L-ring protein FlgH [Vibrio cholerae TM 11079-80]
gi|229524189|ref|ZP_04413594.1| flagellar L-ring protein FlgH [Vibrio cholerae bv. albensis VL426]
gi|229607233|ref|YP_002877881.1| flagellar basal body L-ring protein [Vibrio cholerae MJ-1236]
gi|254225804|ref|ZP_04919409.1| flagellar L-ring protein FlgH [Vibrio cholerae V51]
gi|254849323|ref|ZP_05238673.1| flagellar basal body L-ring protein [Vibrio cholerae MO10]
gi|298500428|ref|ZP_07010233.1| flagellar L-ring protein FlgH [Vibrio cholerae MAK 757]
gi|226701936|sp|A5F678|FLGH_VIBC3 RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|254789286|sp|C3LPJ8|FLGH_VIBCM RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|9656750|gb|AAF95339.1| flagellar L-ring protein FlgH [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549510|gb|EAX59536.1| flagellar L-ring protein FlgH [Vibrio cholerae 2740-80]
gi|121630980|gb|EAX63359.1| flagellar L-ring protein FlgH [Vibrio cholerae V52]
gi|124115802|gb|EAY34622.1| flagellar L-ring protein FlgH [Vibrio cholerae 1587]
gi|125621710|gb|EAZ50039.1| flagellar L-ring protein FlgH [Vibrio cholerae V51]
gi|126512384|gb|EAZ74978.1| flagellar L-ring protein FlgH [Vibrio cholerae NCTC 8457]
gi|126521639|gb|EAZ78862.1| flagellar L-ring protein FlgH [Vibrio cholerae B33]
gi|146316711|gb|ABQ21250.1| flagellar L-ring protein FlgH [Vibrio cholerae O395]
gi|148875185|gb|EDL73320.1| flagellar L-ring protein FlgH [Vibrio cholerae 623-39]
gi|183012979|gb|EDT88279.1| flagellar L-ring protein FlgH [Vibrio cholerae MZO-3]
gi|227010206|gb|ACP06418.1| flagellar L-ring protein FlgH [Vibrio cholerae M66-2]
gi|227014090|gb|ACP10300.1| flagellar L-ring protein FlgH [Vibrio cholerae O395]
gi|229337770|gb|EEO02787.1| flagellar L-ring protein FlgH [Vibrio cholerae bv. albensis VL426]
gi|229341068|gb|EEO06073.1| flagellar L-ring protein FlgH [Vibrio cholerae TM 11079-80]
gi|229343901|gb|EEO08876.1| flagellar L-ring protein FlgH [Vibrio cholerae RC9]
gi|229349019|gb|EEO13976.1| flagellar L-ring protein FlgH [Vibrio cholerae TMA 21]
gi|229352041|gb|EEO16982.1| flagellar L-ring protein FlgH [Vibrio cholerae B33]
gi|229355234|gb|EEO20155.1| flagellar L-ring protein FlgH [Vibrio cholerae BX 330286]
gi|229369888|gb|ACQ60311.1| flagellar L-ring protein FlgH [Vibrio cholerae MJ-1236]
gi|254845028|gb|EET23442.1| flagellar basal body L-ring protein [Vibrio cholerae MO10]
gi|297541121|gb|EFH77175.1| flagellar L-ring protein FlgH [Vibrio cholerae MAK 757]
Length = 261
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSFI--------------VLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 4 MKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPV 63
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P ++ SL+ S ++++ DS+ VGDI+TV + +A
Sbjct: 64 AGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKS 123
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ N N + SG + +++ ++ I
Sbjct: 124 ADADLNKKNDASMD-PLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITVE 182
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 183 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 242
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 243 TNQDMQEPGFLARFFNV 259
>gi|163856438|ref|YP_001630736.1| flagellar basal body L-ring protein [Bordetella petrii DSM 12804]
gi|163260166|emb|CAP42468.1| flagellar basal-body L-ring protein FlgH [Bordetella petrii]
Length = 227
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 4/207 (1%)
Query: 34 MGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAALFKDSRALNVGDILTVDIRI 90
M + + + S+++ + LF+D R NVGDI+T+ +
Sbjct: 21 MIPPEPVVTGPVTAAPPPPPMPAAQPNGSIYQPRVYGNYPLFEDRRPRNVGDIVTIVLNE 80
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
A + T R+ ++ ++ N + G +SGKG S
Sbjct: 81 RTNAAKNVATNTDRSGNVGLGIAATPGFMDSW-ANAKLNTDASGSNKASGKGDSSANNTF 139
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
I V +L NGNL ++G +++ +N + +G+V P+ + NSVS ++A+AR
Sbjct: 140 TGTITTTVIGVLPNGNLQVAGEKQIAINRGSEYVRFSGVVDPRSITGANSVSSTQVADAR 199
Query: 211 ISYGGKGRTTELLRPPIGHQLIENLSP 237
I Y KG E+ + SP
Sbjct: 200 IEYRSKGVMDEVQTMGWLQRFFLIASP 226
>gi|226939371|ref|YP_002794444.1| FlgH1 [Laribacter hongkongensis HLHK9]
gi|226714297|gb|ACO73435.1| FlgH1 [Laribacter hongkongensis HLHK9]
Length = 233
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 26/243 (10%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW 64
S V S LL C M P S + + P + S + +++
Sbjct: 6 SLCVAMASLLLAACS-----------MVPPTSIVQQ----PLTARPQPQAMSRPSNGAIF 50
Query: 65 R-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ L++++ +GD LTV I T S+N L G +L
Sbjct: 51 QTAGVRPLYEEALPRMIGDTLTVVIEEKTTTSAQESTNGSKNAKADIGLPGI-NLPFTNK 109
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
++SG G + + + V +L NGNL++SG ++VR+N E+
Sbjct: 110 DLGPFTGTASASASASGSGKAAASSSFLATLTTTVIDVLPNGNLMVSGEKQVRINGELEY 169
Query: 184 LNVTGIVRPQDVDAHNS---------VSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ ++GIV P+D+ ++ VS ++A+ARI G+G +P +
Sbjct: 170 IRLSGIVNPRDIKPYSRDKGLQQGYYVSSTRLADARIEQQGEGNNNRFAQPGWLTRFFMT 229
Query: 235 LSP 237
+SP
Sbjct: 230 ISP 232
>gi|297580840|ref|ZP_06942765.1| flagellar L-ring protein FlgH [Vibrio cholerae RC385]
gi|297534666|gb|EFH73502.1| flagellar L-ring protein FlgH [Vibrio cholerae RC385]
Length = 261
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 1 MYRYSFI--------------VLCYSSLLFGCHSSISEITGIPQMSP-----MGSSLDEN 41
M R + + + G + + + + + + D
Sbjct: 4 MKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDVLRNRTDPV 63
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P ++ SL+ S ++++ DS+ VGDI+TV + +A
Sbjct: 64 AGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKS 123
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ N N + SG + +++ ++ I
Sbjct: 124 ADADLNKKNDASMD-PLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITVE 182
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 183 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 242
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 243 TNQDMQEPGFLARFFNV 259
>gi|313682863|ref|YP_004060601.1| flagellar l-ring protein [Sulfuricurvum kujiense DSM 16994]
gi|313155723|gb|ADR34401.1| flagellar L-ring protein [Sulfuricurvum kujiense DSM 16994]
Length = 238
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSR 76
GC + ++E P+++ E + +S SL+ + LF D +
Sbjct: 18 GCTARLTE----PEITFTPPKYVEE------MPSREEENSFVARGSLFGQGDSPLFSDHK 67
Query: 77 ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF---------GQQTPQMN 127
A++V D++TV I + + S ++L S + N
Sbjct: 68 AMHVNDVVTVVISETASSSNVGKKALSEADTLGLNGGVFTSAGANSTVNSAVNKLNGLSN 127
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+ +G GS ++ ++A + ++ NGN I+G +E+ V+D+ + + ++
Sbjct: 128 IGFTGGSTSSYAGSGSATKNASFTTTVSARIVKVMSNGNYFITGRREIMVDDQKQIMQLS 187
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
G++RP D+D +N ++ KI++A+I Y +G + G +L+E + P
Sbjct: 188 GVIRPYDIDQNNQINSAKISDAKILYANEGDVDRSTQRGWGSKLVEAVWP 237
>gi|34497162|ref|NP_901377.1| flagellar basal body L-ring protein [Chromobacterium violaceum ATCC
12472]
gi|81656058|sp|Q7NXC0|FLGH1_CHRVO RecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body
L-ring protein 1; Flags: Precursor
gi|34103019|gb|AAQ59382.1| flagellar L-ring protein flgH [Chromobacterium violaceum ATCC
12472]
Length = 217
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 9/189 (4%)
Query: 51 FKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH 109
+ S + ++ + +L D+RA GD+LTV + QA T + +
Sbjct: 34 MRQQTSLPQGGGVFTAGGSLSLTSDNRAFRPGDVLTVVLEETTQASKQAGTSFGKKSGAK 93
Query: 110 RKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
S N + D +G S ++ L + +V +L NG L +
Sbjct: 94 IGPSLI------GNTTFNAQVGIDANRDFNGSSSSTQQNALAGSLTVVVHRVLPNGLLQV 147
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G +++ +N L V G VR +D+D N VS +IA ARI Y G G + P
Sbjct: 148 KGEKQLTLNQGEEMLRVAGYVRVEDIDTDNRVSSLRIANARIGYSGSGALADANSPGWLM 207
Query: 230 QLIENLSPL 238
+ SPL
Sbjct: 208 RFFA--SPL 214
>gi|261211319|ref|ZP_05925607.1| flagellar L-ring protein FlgH [Vibrio sp. RC341]
gi|260839274|gb|EEX65900.1| flagellar L-ring protein FlgH [Vibrio sp. RC341]
Length = 258
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 24/257 (9%)
Query: 1 MYRYSFI--------------VLCYSSLLFGCHSSISEITGIPQ-----MSPMGSSLDEN 41
M R + + + G + + + + + D
Sbjct: 1 MKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSEGNSGLTDALRNRTDPV 60
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P ++ SL+ S ++++ DS+ VGDI+TV + +A
Sbjct: 61 AGDPAWAPIHPKGKPEHYAAETGSLFNLASGSSMYDDSKPRGVGDIITVTLNESTKAAKS 120
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ N N + SG + +++ ++ I
Sbjct: 121 ADADLNKKNDASMD-PLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITVE 179
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 180 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 239
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 240 TNQDMQEPGFLARFFNV 256
>gi|262404537|ref|ZP_06081092.1| flagellar L-ring protein FlgH [Vibrio sp. RC586]
gi|262349569|gb|EEY98707.1| flagellar L-ring protein FlgH [Vibrio sp. RC586]
Length = 258
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 26/245 (10%)
Query: 15 LFGCHSSISEITGIPQM-------------------------SPMGSSLDENNRMPFLGI 49
L GC I + + D+ P
Sbjct: 13 LSGCSLVQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPVADDPAWAPIYPK 72
Query: 50 DFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH 109
+ + ++ L+ DS+ +GDI+TV + +A + N
Sbjct: 73 AKPEHYAAETGSLFNLANNNNLYDDSKPRGIGDIITVTLNESTKAAKSADADLKKKNDSK 132
Query: 110 RKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
N + +G + +++ ++ I V +L NGNL+I
Sbjct: 133 MD-PLAVGGKDLTVGDYNFSYALKNDNKFTGSAAANQSNSMSGSITVEVIEVLANGNLVI 191
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G ++ P
Sbjct: 192 RGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTGTNQDMQEPGFLA 251
Query: 230 QLIEN 234
+
Sbjct: 252 RFFNV 256
>gi|34498337|ref|NP_902552.1| flagellar L-ring protein precursor flgH [Chromobacterium violaceum
ATCC 12472]
gi|81655149|sp|Q7NU21|FLGH2_CHRVO RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|34104191|gb|AAQ60550.1| flagellar L-ring protein precursor flgH [Chromobacterium violaceum
ATCC 12472]
Length = 227
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 21/243 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M I + + LL C + P +
Sbjct: 1 MKSKLAITMVSALLLAACAVQEPPLVQGP----------------TTAKPQPRPVGLPAN 44
Query: 61 YSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ S+ +F+D+ + VGD L + I+ + Q +R + L ++ G +
Sbjct: 45 GAIFQAASYRPMFQDAMPIQVGDTLQITIQENSSTSQSEQVTDTRTSGLSSNITAGVKIP 104
Query: 120 ----GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
G + + N G ++GKG+ A I VT +L NGNL++SG + V
Sbjct: 105 FLPSGLASGLGGTSFNSSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSGEKMV 164
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
R+N + S+ ++G+V P+DV +VS K+A+ARI KG P ++ +L
Sbjct: 165 RINSDTESIRLSGVVNPRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSL 224
Query: 236 SPL 238
P+
Sbjct: 225 LPI 227
>gi|153825366|ref|ZP_01978033.1| flagellar L-ring protein FlgH [Vibrio cholerae MZO-2]
gi|229528801|ref|ZP_04418191.1| flagellar L-ring protein FlgH [Vibrio cholerae 12129(1)]
gi|149741050|gb|EDM55119.1| flagellar L-ring protein FlgH [Vibrio cholerae MZO-2]
gi|229332575|gb|EEN98061.1| flagellar L-ring protein FlgH [Vibrio cholerae 12129(1)]
Length = 261
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 24/257 (9%)
Query: 1 MYRYSFI--------------VLCYSSLLFGCHSSISEITGIPQMS-----PMGSSLDEN 41
M R + + G + + + + + + D
Sbjct: 4 MKRLLASSLLILLSGCSLMQPPIESAETTQGTTTVDAVEGDKSESNSGLTDALRNRTDPV 63
Query: 42 NRMPFLGIDFKNSDS---TKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
P ++ SL+ S ++++ DS+ VGDI+TV + +A
Sbjct: 64 AGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKS 123
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ N N + SG + +++ ++ I
Sbjct: 124 ADADLNKKNDASMD-PLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITVE 182
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL+I G + + +N + ++G +RP D+D N+++ ++I+ ARI Y G G
Sbjct: 183 VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGTG 242
Query: 218 RTTELLRPPIGHQLIEN 234
++ P +
Sbjct: 243 TNQDMQEPGFLARFFNV 259
>gi|327398482|ref|YP_004339351.1| Flagellar L-ring protein [Hippea maritima DSM 10411]
gi|327181111|gb|AEA33292.1| Flagellar L-ring protein [Hippea maritima DSM 10411]
Length = 231
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 18/242 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + LL GC +S E + T
Sbjct: 1 MKRLIAGIAVVVLLSGCTTSNVER------------KYTEMPEYVKEQPSLKPNITHNEG 48
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW ++ +F D +A VGDI+T+ ++ Q+V + T SR S LS + G+
Sbjct: 49 SLWNNTADNMFSDIKARQVGDIVTIIVKEQAQSVNSSSTKTSRATSSQSGLSTLLGMQGK 108
Query: 122 QTPQMN------GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
++N ++ + +G G +L I A V +L N L I G ++V
Sbjct: 109 ILQRLNAVAGASNMMDTSSSSSFNGSGENKVNNELTATITARVVKVLPNHKLFIRGEKQV 168
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
N + ++ +TGI+ + + N++ + I++A+I Y GKG + +L L
Sbjct: 169 YTNGDENTIILTGIIDEYQITSDNTIDSNYISDAKIFYNGKGIVSSTRNEGWLTKLWNLL 228
Query: 236 SP 237
P
Sbjct: 229 RP 230
>gi|289549016|ref|YP_003474004.1| flagellar L-ring protein [Thermocrinis albus DSM 14484]
gi|289182633|gb|ADC89877.1| flagellar L-ring protein [Thermocrinis albus DSM 14484]
Length = 223
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 15/237 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ +L C + + +P + + I
Sbjct: 1 MGKGVMWLIGLLLMLVSCAQKVVSVEEYEARNPYPGQTQQVHYSSMGSIMP--------- 51
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ +L+ D++A VGD++ V + AV SR+ + ++ F +
Sbjct: 52 ----SEGFVSLYSDTKARRVGDVIYVLLVESLNAVESVANQTSRSATFKEGVASLFGISK 107
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
Q++ G G ++ ++ +A V + NG+++I + N+
Sbjct: 108 DVLDQLSAQGGGQMST--KGSGKFQQSAVISTRMAGRVMKVYPNGSMLIEAKKNFYWNNV 165
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R + + G+VR +D+DA N+VS DKIA + G+G T + P +L+ + P
Sbjct: 166 SREMVLRGVVRGEDIDATNTVSSDKIANLEVIVEGRGFTVDGGNPGWLARLLAKVLP 222
>gi|260222471|emb|CBA32068.1| Flagellar L-ring protein 1 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 229
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 3/193 (1%)
Query: 46 FLGIDFKNSDSTKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+ S + S+++ + F+D RA VGD +T+ I + A + + +R
Sbjct: 38 VPAAPIASVVSKPANGSIYQTAAFRPAFEDRRARLVGDAVTIQIVENVTASQKSTSTVNR 97
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
N S+ ++ ++N + SGKG A + I A V L N
Sbjct: 98 NTSIDSAITALPDQTLAGLGKLN--IGAATNNNFSGKGGTESANTFSGSITATVMETLPN 155
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
G+L+++G +++ VN + L +G + P+ + + +S ++A R+ G+G E
Sbjct: 156 GHLVVAGEKQIGVNQNVDVLRFSGTIDPRMLQPGSIISSTQVANVRVESRGRGAQGEAQT 215
Query: 225 PPIGHQLIENLSP 237
+ + P
Sbjct: 216 VGWLSRFFLSFQP 228
>gi|329901233|ref|ZP_08272758.1| Flagellar L-ring protein FlgH [Oxalobacteraceae bacterium IMCC9480]
gi|327549165|gb|EGF33757.1| Flagellar L-ring protein FlgH [Oxalobacteraceae bacterium IMCC9480]
Length = 224
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 20/239 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R VL S+ GC + + I P + + +
Sbjct: 5 MMRLC-SVLLLVSVFSGCAVTPTTIVSRPAI----------------PAAPRPLPLAASN 47
Query: 61 YSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++++ ++ LF+D RA +GD LT+ I A S++ S + + F
Sbjct: 48 GAIFQTAAYRPLFEDRRARLIGDTLTITINEKTTAGKAGAASSSKSGSANLAVPKLFGAP 107
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
T + N GG KG+ + N I V +L NG L++SG +++ ++
Sbjct: 108 TTTTADLA--FNATGGNKYDDKGAATSNNNFNGTIGVTVVDVLANGYLVVSGEKQIGLDR 165
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P + N+V+ ++A+AR+ Y + + ++ PL
Sbjct: 166 GTEFIRFSGVVNPDFIVGGNNVASTQVADARVEYRTNTHIDPAEMMGLLTRFFLSVIPL 224
>gi|109899122|ref|YP_662377.1| flagellar L-ring protein [Pseudoalteromonas atlantica T6c]
gi|109701403|gb|ABG41323.1| flagellar L-ring protein [Pseudoalteromonas atlantica T6c]
Length = 247
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 92/245 (37%), Gaps = 14/245 (5%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL------GIDFKN---- 53
++L L+ C + +S + SP ++ + P +F+
Sbjct: 3 IRVLMLSVMFLVTACSTPVSNEEQVIASSPTNPNVKQRAIQPTKTEIERGNPEFRPVRVD 62
Query: 54 --SDSTKKSYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ SL+ D+ L++ + VGD++ V++ + R ++ +
Sbjct: 63 PFPAVKVPTGSLFDPDNLVGLYQRNNRYRVGDMILVELAEKTSSKKTLNYSRDKSGNFTL 122
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ Q N +++ + L + V I+ NGNL+++
Sbjct: 123 DPVTVKAGPLQINGD-KLNADFEQENEFDSSAETKQDNSLEGDVTVYVLEIMPNGNLLVA 181
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G + + +N + +G +RP D+ N+VS K+ +RI + GKG + + +
Sbjct: 182 GEKWMTLNKGEEFIRFSGEIRPTDISNDNTVSSVKVGNSRIEFSGKGEQQDNQESSLLGK 241
Query: 231 LIENL 235
L L
Sbjct: 242 LFGIL 246
>gi|311105938|ref|YP_003978791.1| flagellar L-ring protein [Achromobacter xylosoxidans A8]
gi|310760627|gb|ADP16076.1| flagellar L-ring protein [Achromobacter xylosoxidans A8]
Length = 214
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 14 LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAA 70
L+ GC M + + + S+++ +
Sbjct: 2 LVAGCA--------------MIPPEPIVTGPTTAAPPPPAAPMAQPTGSIYQPTTYGNYP 47
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
LF+D R NVGDI+T+ + A + T +R+ S ++ S N N
Sbjct: 48 LFEDRRPRNVGDIVTIVLNEKTNASKNVATNTNRSGSASLGIAAAPSFMDSW-ANANLNT 106
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ GG S GKG + I V ++ NGNL ++G +++ +N + +G+V
Sbjct: 107 DAKGGNVSQGKGDSTANNAFTGTITTTVVGVMSNGNLQVAGEKQIAINRGSEFVRFSGVV 166
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P+ + N+VS ++A+ARI Y KG E+ + SP
Sbjct: 167 DPRSITGTNTVSSTQVADARIEYRSKGVMDEVQTMGWLQRFFLIASP 213
>gi|253998485|ref|YP_003050548.1| flagellar L-ring protein [Methylovorus sp. SIP3-4]
gi|253985164|gb|ACT50021.1| flagellar L-ring protein [Methylovorus sp. SIP3-4]
Length = 228
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 24/233 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR- 65
++ + L C + P + S + +++
Sbjct: 19 LLAAGALTLSACTPTSITQG------------------PLTTKPYPASARPPTNGAIYNV 60
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
++ LF+D RA +GD L ++I + A N + S+ S+ ++ F +P
Sbjct: 61 AAYRPLFEDRRARLIGDTLMINITENTSATKANGSSASKKGSVDSSVTASFG-----SPV 115
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
N + + + + + IA V +L NG L++ G ++V ++ +
Sbjct: 116 PRAAFNSASDLSYTDAAAANASNVFTGSIAVTVLDVLPNGYLVVGGEKQVALDKGTEFVR 175
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
++G+V P + A N+V ++A+ARI Y R L I + + PL
Sbjct: 176 LSGVVNPDTITAANTVPSTRVADARIEYRTNSRVDAALVTSILSRFFLSFIPL 228
>gi|126445308|ref|YP_001061249.1| flagellar basal body L-ring protein [Burkholderia pseudomallei 668]
gi|134280650|ref|ZP_01767360.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 305]
gi|167725933|ref|ZP_02409169.1| flagellar basal body L-ring protein [Burkholderia pseudomallei
DM98]
gi|254182891|ref|ZP_04889484.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1655]
gi|254299683|ref|ZP_04967132.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 406e]
gi|125657221|gb|ABN48709.1| flagellar basal body L-ring protein [Burkholderia pseudomallei]
gi|126224799|gb|ABN88304.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 668]
gi|134247672|gb|EBA47756.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 305]
gi|157809608|gb|EDO86778.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 406e]
gi|184213425|gb|EDU10468.1| flagellar L-ring protein FlgH [Burkholderia pseudomallei 1655]
Length = 218
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 84/237 (35%), Gaps = 23/237 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + L C S + + + +S
Sbjct: 1 MMRILLALTGLAC-LGACASIEP---------------PRPDFADDDLPPIATAPAAGRS 44
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++ A +L D RA GD LTV + QA T +N + K F
Sbjct: 45 GGVFNAVTAWSLASDGRAYRPGDTLTVTLEETTQASKRADTKFGKNGDMAVKPGVLFG-- 102
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + ++ G GS S+ L I IV +L G L + G + + +N
Sbjct: 103 ----SAIPFDSSFGAKRNFDGGGSSSQQNTLRGEITVIVNQVLAGGLLQVKGEKVLSLNQ 158
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ ++G VR D+D +N VS ++A ARI Y GKG ++ + +
Sbjct: 159 GEEVMRLSGYVRQADIDTNNRVSSRRLANARIKYVGKGALSDSNSAGWLTRFFNSPW 215
>gi|313200560|ref|YP_004039218.1| flagellar l-ring protein [Methylovorus sp. MP688]
gi|312439876|gb|ADQ83982.1| flagellar L-ring protein [Methylovorus sp. MP688]
Length = 230
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 24/233 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR- 65
++ + L C + P + S + +++
Sbjct: 21 LLAAGALTLSACTPTSITQG------------------PLTTKPYPASARPPTNGAIYNV 62
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
++ LF+D RA +GD L ++I + A N + S+ S+ ++ F +P
Sbjct: 63 AAYRPLFEDRRARLIGDTLMINITENTSATKANGSSASKKGSVDSSVTASFG-----SPL 117
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
N + + + + + IA V +L NG L++ G ++V ++ +
Sbjct: 118 PRAAFNSASDLSYTDAAAANASNVFTGSIAVTVLDVLPNGYLVVGGEKQVALDKGTEFVR 177
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
++G+V P + A N+V ++A+ARI Y R L I + + PL
Sbjct: 178 LSGVVNPDTITAANTVPSTRVADARIEYRTNSRVDAALVTSILSRFFLSFIPL 230
>gi|293605006|ref|ZP_06687402.1| flagellar L-ring protein [Achromobacter piechaudii ATCC 43553]
gi|292816611|gb|EFF75696.1| flagellar L-ring protein [Achromobacter piechaudii ATCC 43553]
Length = 229
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 4/208 (1%)
Query: 33 PMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD---SHAALFKDSRALNVGDILTVDIR 89
M + + S+++ + LF+D R NVGDI+T+ +
Sbjct: 22 AMIPPEPIVTGPTTAAPPPPPMPMAQPTGSIYQPTTYGNYPLFEDRRPRNVGDIVTIVLN 81
Query: 90 IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
A + T +R S ++ S N N + GG + GKG +
Sbjct: 82 ERTNASKNVATNTNRTGSATLGIAAAPSFMDSWAG-ANLNTDAKGGNVAQGKGDSTANNA 140
Query: 150 LNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEA 209
I V ++ NGNL ++G +++ +N + G+V P+ + N+VS ++A+A
Sbjct: 141 FTGTITTTVVGVMSNGNLQVAGEKQIAINRGSEYVRFAGVVDPRSITGTNTVSSTQVADA 200
Query: 210 RISYGGKGRTTELLRPPIGHQLIENLSP 237
RI Y KG E+ + SP
Sbjct: 201 RIEYRSKGVMDEVQTMGWLQRFFLLASP 228
>gi|224823773|ref|ZP_03696882.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
gi|224604228|gb|EEG10402.1| flagellar L-ring protein [Lutiella nitroferrum 2002]
Length = 227
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+R + LL C S P + +
Sbjct: 1 MFRRVMGGTALACLLGACSSVSPTAVSGP--------------TTVRPGYALANLENRNQ 46
Query: 61 YSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG-GFSL 118
++R A L F+ A +GDI+ ++I + T SR N+L G G S+
Sbjct: 47 GGIFRAGSAHLLFEQQSARYIGDIVKIEIAESLSGSNKSGTSGSRKNALKVAGPGAGSSM 106
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
G + +++ G + SGKG + + L +AA V IL NGNL+++G + + +
Sbjct: 107 TGLLKWIFDIDVDASGSDSFSGKGENTNSNVLKGKLAASVINILPNGNLVVAGEKSIAQH 166
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+L +G+V P D+ A N VS D +A+AR GG+G + Q +
Sbjct: 167 GNSNTLRFSGVVSPNDIKAGNLVSSDNVADARFELGGRGLVADSNSRSWMQQFL 220
>gi|302392937|ref|YP_003828757.1| flagellar L-ring protein [Acetohalobium arabaticum DSM 5501]
gi|302205014|gb|ADL13692.1| flagellar L-ring protein [Acetohalobium arabaticum DSM 5501]
Length = 195
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ SL+ DS++ + + +A GDILTV I A T ++N ++
Sbjct: 27 AASLYEDSNSP-YGEHKAAEAGDILTVMISESSTADQQASTETGQSNEVNVG-------P 78
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
G + +SS GS S++ L + VT +L NGNL I G++E+ VN
Sbjct: 79 GAGELDFVKLFRLNQEDSSSADGSTSQSGSLTAQMTVQVTEVLPNGNLKIEGTKEITVNA 138
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
E++ + V GIVRP+D+ N+V+ KIA ++I Y G+G + P + +++
Sbjct: 139 EMQKIEVEGIVRPEDITISNTVNSTKIANSKIKYVGEGAIGDRQEPGLLTKVLNVFF 195
>gi|167576665|ref|ZP_02369539.1| flagellar basal body L-ring protein [Burkholderia thailandensis
TXDOH]
Length = 218
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 84/237 (35%), Gaps = 23/237 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + L C S + + + +S
Sbjct: 1 MMRILLALTWLAC-LGACTSIEP---------------PRPDFADDDLPPLATASAAGRS 44
Query: 61 YSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
++ A +L D RA GD LTV + QA T +N + K F
Sbjct: 45 GGVFNAVTAWSLASDGRAYRPGDTLTVTLEETTQASKRADTKFGKNGDMAVKPGVLFG-- 102
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + ++ G GS S+ L I IV +L G L + G + + +N
Sbjct: 103 ----SAVPFDSSFGAKRNFDGGGSSSQQNTLRGEITVIVNQVLAGGLLQVKGEKVLSLNQ 158
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ ++G VR D+D +N VS +IA ARI Y GKG ++ + +
Sbjct: 159 GEEVMRLSGYVRQADIDTNNRVSSRRIANARIKYVGKGALSDSNSAGWLTRFFNSPW 215
>gi|90408391|ref|ZP_01216553.1| Flagellar basal body L-ring protein [Psychromonas sp. CNPT3]
gi|90310484|gb|EAS38607.1| Flagellar basal body L-ring protein [Psychromonas sp. CNPT3]
Length = 252
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 17/241 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEIT------------GIPQMSPMGSSLDENNRMPFLG 48
M + I + L++GC S + I Q++ P+
Sbjct: 1 MIKKLVIAISI-VLMWGCTSLMDPINAVGKKVQQKEDKSQRQVTSSTEDHSPTADDPYYA 59
Query: 49 I--DFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRN 105
+N+++ + SL+ A L+ +GD +TV ++ A + +
Sbjct: 60 PIDPSRNAEAILVTGSLFNSETAHDLYNYETTFQLGDSITVLLKEKAVATKSATSTLASA 119
Query: 106 NSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ ++ L G G +++ L I + IL NG
Sbjct: 120 TNYKLDPIQVPGGPMTVNGKV-VELGMKQGQDFDGAADSAQSHSLTARITVSIVEILNNG 178
Query: 166 NLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRP 225
NL + G + + +N+ + TGIVRP D+ NSV ++A +RI + G G ++
Sbjct: 179 NLKVRGEKWLVINNGKEYIRFTGIVRPSDITEKNSVESYQVANSRIEFSGTGDHADIQTQ 238
Query: 226 P 226
Sbjct: 239 G 239
>gi|114800335|ref|YP_758989.1| flagellar L-ring protein FlgH [Hyphomonas neptunium ATCC 15444]
gi|114740509|gb|ABI78634.1| flagellar L-ring protein FlgH [Hyphomonas neptunium ATCC 15444]
Length = 239
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
+ G + D ++ SLW + AL RA VGD+LTV + ++DQA + R
Sbjct: 38 YAGYPGAVPEPVDPNIQNASLWETAPTALLSMRRAKEVGDLLTVVVEMNDQASLQSSLSR 97
Query: 103 SRNNSLHRKLSGGFSLF------GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+R++S + F L ++ ++ + +G G+++RAEK+ +AA
Sbjct: 98 NRDSSDDMNVEALFGLPEWANGVLPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAA 157
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V + NGNLII G Q+ RV++E+R L V+G++R QD+ N+V+YDKIA+A+++Y
Sbjct: 158 RVIGVEPNGNLIIHGYQQTRVSNEVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSN 217
Query: 217 GRTTELLRPPIGHQLIENLSP 237
G + IG ++I+ + P
Sbjct: 218 GDASSATDRKIGTKIIDRVVP 238
>gi|322378821|ref|ZP_08053247.1| flagellar basal body L-ring protein [Helicobacter suis HS1]
gi|322380137|ref|ZP_08054385.1| flagellar basal body L-ring protein [Helicobacter suis HS5]
gi|321147442|gb|EFX42094.1| flagellar basal body L-ring protein [Helicobacter suis HS5]
gi|321148745|gb|EFX43219.1| flagellar basal body L-ring protein [Helicobacter suis HS1]
Length = 253
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 10/207 (4%)
Query: 41 NNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQT 100
+ K SL+ LF D RA+ D++TV I + A +
Sbjct: 46 PPDYVEDMPSKEFIPQIAKPGSLFGQGERPLFADRRAMKPNDLVTVMINENASANYSASK 105
Query: 101 GRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG----------ASSGKGSISRAEKL 150
+ ++ + + D G GS ++E +
Sbjct: 106 NYTNTSNGNSTAPRLTYNGTNPNKRNQAQFLDDQSNYNLTQSTTNNTFKGGGSQKKSEDM 165
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
L I A + +LENGN I GS+E+ V+ E + + ++G+VRP D+ +N++ IA+A+
Sbjct: 166 KLTITARIVKVLENGNYFIYGSREILVDGEKQIIKISGVVRPFDISRNNTIESKYIADAK 225
Query: 211 ISYGGKGRTTELLRPPIGHQLIENLSP 237
I+Y G + + + ++++ P
Sbjct: 226 IAYTHIGSLSASNKKKLASDVLDSSFP 252
>gi|315453929|ref|YP_004074199.1| flagellar L-ring protein [Helicobacter felis ATCC 49179]
gi|315132981|emb|CBY83609.1| flagellar L-ring protein precursor [Helicobacter felis ATCC 49179]
Length = 234
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 24/247 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+++ L + + P + ++ K
Sbjct: 1 MFKFKLASFVVLLSLA------RAVEPGIKFDPPDYVEEMPSKEFI--------PEIAKP 46
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++TV+I + A + + ++
Sbjct: 47 GSLFGQGERPLFADRRAMKPNDLVTVEISENASANYSASKNYANTSNGTSTPPRLAYNGT 106
Query: 121 QQTPQMNGNLNYDGGG----------ASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ D G GS ++E L ++ A + +LENGN I
Sbjct: 107 DLNKREQAQFLDDRSNYSLTQPTTNKTFKGGGSQKKSEDLKFILTARIVKVLENGNYFIY 166
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
GS+E+ V+ E + + ++G+VRP D++ +N V IA+A+ISY G + + + ++
Sbjct: 167 GSKEILVDGEKQVIKLSGVVRPFDINKNNVVQSKHIADAKISYTNLGPLSASNKKKLSNE 226
Query: 231 LIENLSP 237
++E+ P
Sbjct: 227 VLESEFP 233
>gi|289670512|ref|ZP_06491587.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 160
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%)
Query: 80 VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASS 139
VGD+LTV++ A T S+ ++ + +G + +
Sbjct: 1 VGDLLTVNLVESTTASSTANTSISKKDATTMSAPTLLGAPLTVGGLNVLENSTNGDRSFA 60
Query: 140 GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
GKG+ +++ ++ + V L NGNL+I G + +R+ + V GIVR D+ N
Sbjct: 61 GKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQVQGIVRAADIAPDN 120
Query: 200 SVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+V ++A+ARI+YGG+G + + +
Sbjct: 121 TVPSSRVADARIAYGGRGAIAQSNAMGWLSRFFNS 155
>gi|253996316|ref|YP_003048380.1| flagellar L-ring protein [Methylotenera mobilis JLW8]
gi|253982995|gb|ACT47853.1| flagellar L-ring protein [Methylotenera mobilis JLW8]
Length = 260
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 88/233 (37%), Gaps = 25/233 (10%)
Query: 14 LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALF 72
LL+GC + + I P ++ + ++ S + +F
Sbjct: 43 LLYGCAVTPTSIVN----------------QPTTARAPSIGNTPNNNGGIYSASSYRPMF 86
Query: 73 KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR--------KLSGGFSLFGQQTP 124
+D R +GDI+T+ I + A N + S+ S+ + L +
Sbjct: 87 EDHRPRFIGDIVTISITENTSATKANGSSASKQGSVSFSTDAKLGDNIPVVGGLVSRLPY 146
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
G+ + + + + + + I V +L NG L +SG ++V ++ +
Sbjct: 147 AKLGSASASSDNSYTDDAAGNAKNVFSGSITTTVVDVLPNGYLAVSGEKQVALDKGTEFI 206
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+G+V P + N+V K+A+ARI Y + I + ++SP
Sbjct: 207 RFSGVVNPDTITLGNTVPSTKVADARIEYRTNSKIDGAAVASIFARFFLSVSP 259
>gi|258592558|emb|CBE68867.1| Flagellar L-ring protein (Basal body L-ring protein) (fragment)
[NC10 bacterium 'Dutch sediment']
Length = 204
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 57 TKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
T SLWRD LF D++A +VGDI+TV + +T + ++ LS
Sbjct: 26 TASGESLWRDIGSGFLFVDTKAQHVGDIVTVLVTESSSLNRQTETNTKKESTNSANLSSL 85
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
F L ++G G GSI+R++++ + A V +L +GNLII G + V
Sbjct: 86 FGLPLG----DKTQYAFEGANEHKGSGSITRSDEVTARVVARVVKVLPSGNLIIEGRRAV 141
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
R NDE + + ++G++R D+ N++ +IA+A I GKG E RP + ++ + L
Sbjct: 142 RANDESQYVAISGVIRQVDITPANTILSTQIADAEIVLEGKGALAEKQRPGLLNRFADWL 201
Query: 236 S 236
Sbjct: 202 F 202
>gi|120613062|ref|YP_972740.1| flagellar L-ring protein [Acidovorax citrulli AAC00-1]
gi|120591526|gb|ABM34966.1| flagellar L-ring protein [Acidovorax citrulli AAC00-1]
Length = 237
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 14/223 (6%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW-RDSHAALFKD 74
GC S + P + + + + SL+ S+ F+D
Sbjct: 27 TGCASVNPPPPIDMPPT-----------QPPIAVQTVPRATGPATGSLFHAASYRPAFED 75
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGDI+T+ I A + + R + +S + ++ L +
Sbjct: 76 RRARLVGDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIGAGDLGKLK--LGGNS 133
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
GKG + + I V +L NG+L+I+G +++ V + + L +G V P+
Sbjct: 134 TNNFEGKGDLQSSNTFTGTITTTVVEVLPNGHLVIAGEKQIGVAENVDVLRFSGTVDPRS 193
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + VS +A AR+ G+G E + +++P
Sbjct: 194 LQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAP 236
>gi|269792755|ref|YP_003317659.1| flagellar L-ring protein [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100390|gb|ACZ19377.1| flagellar L-ring protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 192
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLWR+ LF D R VGDI+TV + + ++ S+ ++ G
Sbjct: 26 SLWREG-TDLFADRRPSRVGDIVTVRVNETTDTKDEGKSSTSKTDNSGMNA-------GT 77
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ G S+G R ++ I+ +VT +L GNL+I G ++V +E
Sbjct: 78 GILDFIKAFSIGGSSNSAGNSKTERKHNVSTQISCVVTEVLPGGNLVILGQRDVVTQEEK 137
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
++ +G++RP+DV+ N +S ++A A I GKG + + RP I Q+I+ L
Sbjct: 138 LKVSFSGVIRPEDVEPGNVISSSRVANAEIRVEGKGAVSRVQRPGIFTQIIQALF 192
>gi|261837766|gb|ACX97532.1| flagellar basal-body L-ring protein [Helicobacter pylori 51]
gi|332673170|gb|AEE69987.1| flagellar L-ring protein FlgH [Helicobacter pylori 83]
Length = 237
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFTPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|4378855|gb|AAD19723.1| flagellar L-ring protein precursor [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 219
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 24/234 (10%)
Query: 2 YRYSFIVLCYSSLLFGCH---SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
+ SF + + + + P + +P
Sbjct: 1 MKPSFSAMLIAVTVLAVSPLHARKKVTQPDPNFAATYPDDPRPEVVP------------- 47
Query: 59 KSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ ++++ + + +RA +VGD++T+ + A T SR+
Sbjct: 48 -NGAIFQPSYGYMPIISGARASHVGDMVTITLVESFAASKSANTTTSRSGGASIIPPTT- 105
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G + + G G+ ++ L+ I A V + +G ++I G + +
Sbjct: 106 ---GPLSFFKATDATASSSHNFKGTGTTGQSNSLSGEITATVARVFPDGTMLIRGEKIMT 162
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR-PPIGH 229
+N + ++G+VRP D+D N V +I +ARISY G G
Sbjct: 163 INRGDEHIRISGLVRPWDIDGTNHVLSTRIGDARISYTGTGDVARATVWVGWVT 216
>gi|163733145|ref|ZP_02140589.1| flagellar L-ring protein precursor H [Roseobacter litoralis Och
149]
gi|161393680|gb|EDQ18005.1| flagellar L-ring protein precursor H [Roseobacter litoralis Och
149]
Length = 158
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 6/157 (3%)
Query: 87 DIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGG------GASSG 140
I ID++A N T RSR+ S + F + + Q+ SSG
Sbjct: 1 MIEIDEEAEISNATDRSRSGSESLGIPNLFGVPQRIDRQLPAGATLSDAVSINSSSNSSG 60
Query: 141 KGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNS 200
GS+ R EKL L +AA + +L NG L I+GSQE+RVN E+R L V+G VRP+D+ N
Sbjct: 61 DGSVKRNEKLTLRVAATIVDVLPNGVLSIAGSQELRVNFEMRELLVSGYVRPEDISRQNE 120
Query: 201 VSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
++YDKIA AR+SYGG+G+ T++ +P G Q ++ + P
Sbjct: 121 ITYDKIATARVSYGGRGQITDVQQPRWGQQALDIVLP 157
>gi|299066530|emb|CBJ37720.1| Flagellar L-ring protein precursor (Basal body L-ring protein)
[Ralstonia solanacearum CMR15]
Length = 179
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 57 TKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ SL+++ + L D++A VGD++TV + + A+ T R N+L+ ++
Sbjct: 5 AAVAESLYKEGAYRQLTSDNKAFRVGDVITVQVYENSSALTSTDTTTQRKNNLNVGVTTL 64
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ + G G G+ R KL I V +L NG+L I+G Q +
Sbjct: 65 PAGRQIGG-------SVGVAGDFDGGGTTQRTNKLLATITVAVQDVLPNGDLRIAGEQLL 117
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
VNDE + + G VRPQD+ N V ++AEA I+Y G+G ++ R +L++ L
Sbjct: 118 TVNDEQHKVALEGRVRPQDISDGNVVLSTRLAEAHINYVGEGDLSDRQRRSWWRKLVDFL 177
>gi|109947537|ref|YP_664765.1| flagellar basal body L-ring protein [Helicobacter acinonychis str.
Sheeba]
gi|109714758|emb|CAJ99766.1| flagellar L-ring protein FlgH [Helicobacter acinonychis str.
Sheeba]
Length = 232
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 97/247 (39%), Gaps = 26/247 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + LC ++L ++ +I +P + ++ K
Sbjct: 1 MKK----ALCIGAILLSMSANEPKI----DFNPPNYVEETPSKEFI--------PELNKL 44
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 45 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 104
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 105 DEKKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 164
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 165 GNKEVLVDGEKQVLKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 224
Query: 231 LIENLSP 237
+E P
Sbjct: 225 AMETQMP 231
>gi|317010605|gb|ADU84352.1| flagellar basal body L-ring protein [Helicobacter pylori
SouthAfrica7]
Length = 237
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DEKKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|15644953|ref|NP_207123.1| flagellar basal body L-ring protein [Helicobacter pylori 26695]
gi|14548024|sp|O25092|FLGH_HELPY RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|2313423|gb|AAD07392.1| flagellar basal-body L-ring protein (flgH) [Helicobacter pylori
26695]
Length = 237
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|308182497|ref|YP_003926624.1| flagellar basal body L-ring protein [Helicobacter pylori PeCan4]
gi|308064682|gb|ADO06574.1| flagellar basal body L-ring protein [Helicobacter pylori PeCan4]
Length = 237
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S++F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVIFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|217033383|ref|ZP_03438814.1| hypothetical protein HP9810_9g136 [Helicobacter pylori 98-10]
gi|216944324|gb|EEC23749.1| hypothetical protein HP9810_9g136 [Helicobacter pylori 98-10]
Length = 237
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKVLYLGAVAFSVAFSMASANEPKI---DFNPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|15611377|ref|NP_223028.1| flagellar basal body L-ring protein [Helicobacter pylori J99]
gi|14548056|sp|Q9ZMB3|FLGH_HELPJ RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|4154828|gb|AAD05882.1| FLAGELLAR L-RING PROTEIN PRECURSOR (BASAL BODY L-RING PROTEIN)
[Helicobacter pylori J99]
Length = 237
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 96/248 (38%), Gaps = 23/248 (9%)
Query: 1 MYRYSFI-VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + ++ + + + ++ I +P + ++ K
Sbjct: 1 MKKALYLGAVAFGVVFSMASANEPNI----DFNPPNYVEETPSKEFI--------PELNK 48
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 49 LGSLFGQGERPLFADRRAMKPNDLITIVVSEKASANYSSSKDYKSASGGNSTPPRLTYNG 108
Query: 120 GQQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 109 LDERKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFI 168
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 169 YGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAA 228
Query: 230 QLIENLSP 237
+E P
Sbjct: 229 DAMETQMP 236
>gi|317180776|dbj|BAJ58562.1| flagellar basal body L-ring protein [Helicobacter pylori F32]
Length = 237
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSTSGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|222112275|ref|YP_002554539.1| flagellar l-ring protein [Acidovorax ebreus TPSY]
gi|221731719|gb|ACM34539.1| flagellar L-ring protein [Acidovorax ebreus TPSY]
Length = 238
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 21/230 (9%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW-RDSHAALFKDS 75
GC S ++P P + + + S SL+ S+ F+D
Sbjct: 20 GCAS----------INPPPPVDVLPTTPPPIAALPRPAGP--ASGSLFHAASYRPAFEDQ 67
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG--NLNYD 133
RA VGD++T++I A D ++ +RN ++ L ++ L
Sbjct: 68 RARLVGDMVTIEILESIDAKQDTKSNVNRNGDTKGSITALPLLAPSTVGKLAARSGLGAG 127
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
+G G+ + + I +VT +L NG+L+I+G ++V VN + L +GIV P+
Sbjct: 128 YENTFNGSGNTASKNEFKSNITTLVTEVLPNGHLVITGEKQVGVNRSVDVLRFSGIVDPR 187
Query: 194 DVD------AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + + +A R+ G G E + +SP
Sbjct: 188 HLRRGQPGHPGSVIDSRYVANVRVISRGLGEQAEAQAMGWLARAFNTISP 237
>gi|317013771|gb|ADU81207.1| flagellar basal body L-ring protein [Helicobacter pylori
Gambia94/24]
Length = 237
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 96/248 (38%), Gaps = 23/248 (9%)
Query: 1 MYRYSFI-VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + ++ + + + ++ I +P + ++ K
Sbjct: 1 MKKALYLGAVAFGVIFSMASANEPNI----DFNPPNYVEETPSKEFI--------PELNK 48
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 49 LGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNG 108
Query: 120 GQQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 109 LDERKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFI 168
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 169 YGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAA 228
Query: 230 QLIENLSP 237
+E P
Sbjct: 229 DAMETQMP 236
>gi|208434272|ref|YP_002265938.1| flagellar basal-body L-ring protein [Helicobacter pylori G27]
gi|208432201|gb|ACI27072.1| flagellar basal-body L-ring protein [Helicobacter pylori G27]
Length = 237
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S++F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVIFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|121596120|ref|YP_988016.1| flagellar L-ring protein [Acidovorax sp. JS42]
gi|120608200|gb|ABM43940.1| flagellar L-ring protein [Acidovorax sp. JS42]
Length = 238
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 21/230 (9%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW-RDSHAALFKDS 75
GC S ++P P + + S SL+ S+ F+D
Sbjct: 20 GCAS----------INPPPPVDVLPTTPPPIAALPRPVGP--ASGSLFHAASYRPAFEDQ 67
Query: 76 RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG--NLNYD 133
RA VGD++T++I A D ++ +RN ++ L ++ L
Sbjct: 68 RARLVGDMVTIEILESIDAKQDTKSNVNRNGDTKGSITALPLLAPSTVGKLAARSGLGAG 127
Query: 134 GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQ 193
+G G+ + + I +VT +L NG+L+I+G ++V VN + L +GIV P+
Sbjct: 128 YENTFNGSGNTASKNEFKSNITTLVTEVLPNGHLVITGEKQVGVNRSVDVLRFSGIVDPR 187
Query: 194 DVD------AHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + + +A R+ G G E + +SP
Sbjct: 188 HLRRGQPGHPGSVIDSRYVANVRVISRGLGEQAEAQAMGWLARAFNTISP 237
>gi|317179280|dbj|BAJ57068.1| flagellar basal body L-ring protein [Helicobacter pylori F30]
gi|317181667|dbj|BAJ59451.1| flagellar basal body L-ring protein [Helicobacter pylori F57]
Length = 237
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVALSVAFSMASANEPKI---DFNPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|307637019|gb|ADN79469.1| flagellar L0 ring protein [Helicobacter pylori 908]
gi|325995612|gb|ADZ51017.1| Flagellar basal body L-ring protein [Helicobacter pylori 2018]
gi|325997208|gb|ADZ49416.1| Flagellar basal body L-ring protein [Helicobacter pylori 2017]
Length = 237
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 95/248 (38%), Gaps = 23/248 (9%)
Query: 1 MYRYSFI-VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + ++ + + ++ I +P + ++ K
Sbjct: 1 MKKALYLGAVAFGVAFSMASANEPNI----DFNPPNYVEETPSKEFI--------PELNK 48
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 49 LGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNG 108
Query: 120 GQQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 109 LDERKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFI 168
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 169 YGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAA 228
Query: 230 QLIENLSP 237
+E P
Sbjct: 229 DAMETQMP 236
>gi|261839177|gb|ACX98942.1| flagellar basal body L-ring protein [Helicobacter pylori 52]
gi|315586317|gb|ADU40698.1| flagellar L-ring protein FlgH [Helicobacter pylori 35A]
Length = 237
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|254779024|ref|YP_003057129.1| flagellar basal body L-ring protein [Helicobacter pylori B38]
gi|254000935|emb|CAX28871.1| Flagellar L-ring protein precursor (Basal body L-ring protein);
putative signal peptide [Helicobacter pylori B38]
gi|297379546|gb|ADI34433.1| Flagellar L-ring protein precursor [Helicobacter pylori v225d]
gi|308061675|gb|ADO03563.1| flagellar basal body L-ring protein [Helicobacter pylori Cuz20]
gi|308063186|gb|ADO05073.1| flagellar basal body L-ring protein [Helicobacter pylori Sat464]
gi|317012165|gb|ADU82773.1| flagellar basal body L-ring protein [Helicobacter pylori
Lithuania75]
Length = 237
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|308184128|ref|YP_003928261.1| flagellar basal body L-ring protein [Helicobacter pylori SJM180]
gi|308060048|gb|ADO01944.1| flagellar basal body L-ring protein [Helicobacter pylori SJM180]
Length = 237
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S++F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVIFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTP-------QMNGNLNYDGGGA---SSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ N N+ G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEVQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|317008972|gb|ADU79552.1| flagellar basal body L-ring protein [Helicobacter pylori India7]
Length = 237
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPSYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ G GS ++E L ++++A + +LENGN I
Sbjct: 110 DARKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|85710167|ref|ZP_01041232.1| flagellar L-ring protein precursor [Erythrobacter sp. NAP1]
gi|85688877|gb|EAQ28881.1| flagellar L-ring protein precursor [Erythrobacter sp. NAP1]
Length = 227
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 91/241 (37%), Gaps = 19/241 (7%)
Query: 1 MYRYSFI--VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R + + + L C ++ ++ L P +
Sbjct: 1 MKRIFRLATLTLAAFSLSACLANGAKR-----------ELGFAAPPPPPAMAPIAGAEYA 49
Query: 59 KSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S+++ +A L +RA +GD++T+ + R+ L
Sbjct: 50 NKGSIYQASQGYAPLVTGTRARGLGDMVTILLVESTATSKSITGQTDRSGGLALIPPS-- 107
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G LN G G+ +G G+ ++ +L +A + AI NG + G +++
Sbjct: 108 --AGPLGFLNPDALNASGSGSFNGSGNAAQQSQLTGTVAVTIAAIYPNGTAEVVGEKQMA 165
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
++ + +G +R D+D N++ ++A ARI Y G+G RP + ++S
Sbjct: 166 LSQGDEWVQFSGRIRLVDIDVDNTLPSSRVANARIIYTGQGAVQRASRPGWLSRFFGSIS 225
Query: 237 P 237
P
Sbjct: 226 P 226
>gi|317177140|dbj|BAJ54929.1| flagellar basal body L-ring protein [Helicobacter pylori F16]
Length = 237
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 49/247 (19%), Positives = 97/247 (39%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTP-------QMNGNLNYDGGGA---SSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ N N+ G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEVQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|210134520|ref|YP_002300959.1| flagellar basal body L-ring protein [Helicobacter pylori P12]
gi|210132488|gb|ACJ07479.1| flagellar basal-body L-ring protein [Helicobacter pylori P12]
Length = 237
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKRQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|188527130|ref|YP_001909817.1| flagellar basal body L-ring protein [Helicobacter pylori Shi470]
gi|188143370|gb|ACD47787.1| flagellar basal body L-ring protein [Helicobacter pylori Shi470]
Length = 237
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + G + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKGYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|289523330|ref|ZP_06440184.1| flagellar L-ring protein FlgH [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503022|gb|EFD24186.1| flagellar L-ring protein FlgH [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 190
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ + SLW+D A L+ D R VGDI+TV + A + T ++
Sbjct: 17 AGSAGAQSLWQDG-ANLYADPRPSRVGDIVTVIVDESLSANDEANTDLTKEIDHGVD--- 72
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
G SG S R LN ++ +VT + ENGNL+I G ++
Sbjct: 73 ----DGTGIFDFIRRFGVSANTDMSGDTSTERDYSLNTTVSCMVTEVQENGNLVIEGYRD 128
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
++ +DE L + G++RP+DV N++S K+A + GKG + + +P + Q+++
Sbjct: 129 LKTHDETLKLTLRGVIRPKDVSYDNTISSTKMANPELFVEGKGSLSRVQKPGLITQILQA 188
Query: 235 LS 236
L
Sbjct: 189 LF 190
>gi|239815251|ref|YP_002944161.1| flagellar L-ring protein [Variovorax paradoxus S110]
gi|239801828|gb|ACS18895.1| flagellar L-ring protein [Variovorax paradoxus S110]
Length = 201
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 56 STKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ + SL++++ L D++A VGD LTV + + A TG R N ++ ++
Sbjct: 26 APAVAESLFQENSFRPLTADNKAFRVGDSLTVQVFENSSASTSANTGTRRANDINGSVT- 84
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
Q ++ G L G G G RA KL + V +L N L ++G Q
Sbjct: 85 ------QTGNRVVGQLGIGVTGEFDGGGRTQRANKLLATLTVTVKEVLANNELRVAGEQL 138
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ VNDE++ +N+ G VRPQD+ N V ++A+ARI+Y G+G + R ++ +
Sbjct: 139 LTVNDELQKVNLEGRVRPQDISDGNVVLSTRLADARITYVGEGDVADRARRSAWRRIFDW 198
Query: 235 L 235
L
Sbjct: 199 L 199
>gi|2494537|sp|Q52081|FLGH_PSEPU RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|405549|gb|AAA62845.1| flagellar L-ring protein [Pseudomonas putida]
Length = 231
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 84/246 (34%), Gaps = 26/246 (10%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITG--IPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R L + LL GC + T + + + + +
Sbjct: 1 MNRLLSVFALGGAVLLAGCVAPTPSPTTRTMRRCCRAPRCRQRPTTVRSTRPVSSRTCTA 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S W S + R+++ A + + ++ + L+ F
Sbjct: 61 TARRSGWVTSSPS-----RSMS-----------ATSASKNAGSQIAKTSKTDIGLTSLFG 104
Query: 118 LFGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
++ Y G A+ G ++ L I V +L NGN +
Sbjct: 105 STPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGNHRRARQ 164
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLI 232
+ + +N + + G+VR D+ N+V ++A+ARI+Y G G + +P +
Sbjct: 165 KWLTLNTGEELVRIAGMVRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFF 224
Query: 233 ENLSPL 238
+SPL
Sbjct: 225 --ISPL 228
>gi|217031551|ref|ZP_03437056.1| hypothetical protein HPB128_21g109 [Helicobacter pylori B128]
gi|298736730|ref|YP_003729260.1| flagellar L-ring protein FlgH [Helicobacter pylori B8]
gi|216946751|gb|EEC25347.1| hypothetical protein HPB128_21g109 [Helicobacter pylori B128]
gi|298355924|emb|CBI66796.1| flagellar L-ring protein precursor FlgH [Helicobacter pylori B8]
Length = 237
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 95/248 (38%), Gaps = 23/248 (9%)
Query: 1 MYR-YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + + +S ++ +I +P + ++ K
Sbjct: 1 MKKALCLGAVAFSVAFNMASANEPKI----DFNPPNYVEETPSKEFI--------PELNK 48
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 49 LGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNG 108
Query: 120 GQQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 109 LDERKKQEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFI 168
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 169 YGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAA 228
Query: 230 QLIENLSP 237
+E P
Sbjct: 229 DAMETQMP 236
>gi|108562753|ref|YP_627069.1| flagellar basal body L-ring protein [Helicobacter pylori HPAG1]
gi|107836526|gb|ABF84395.1| flagellar basal-body L-ring protein [Helicobacter pylori HPAG1]
Length = 237
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 21/247 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFNMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGL 109
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 110 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 169
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G++EV V+ E + L V+G++RP D++ +N++ +A+A+I Y G ++ +
Sbjct: 170 GNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAAD 229
Query: 231 LIENLSP 237
+E P
Sbjct: 230 AMETQMP 236
>gi|332307220|ref|YP_004435071.1| flagellar L-ring protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174549|gb|AEE23803.1| flagellar L-ring protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 247
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 85/232 (36%), Gaps = 14/232 (6%)
Query: 17 GCHSSISEITGIPQMSPMGSSLDENNRMPF------------LGIDFKNSDSTKKSYSLW 64
C + I+ + SP ++ + P + SL+
Sbjct: 16 ACSTPITNDEQVIASSPTNPNVKQRAIQPTKTDIERGDPEFRPVRVDPFPAVKVPTGSLF 75
Query: 65 R-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
D+ L++ + VGD++ V++ + R ++ + + Q
Sbjct: 76 DPDNLVGLYQRNNRYRVGDMILVELAEKTSSKKTLNYSRDKSGNFTLD-PVTVNAGPLQI 134
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
N +++ + L + V I+ NGNL+++G + + +N
Sbjct: 135 NGDKLNADFEQENEFDSSAETKQDNSLEGDVTVYVLEIMPNGNLLVAGEKWMTLNKGEEF 194
Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+ +G +RP D+D N+VS K+ +RI + GKG + + +L L
Sbjct: 195 IRFSGEIRPSDIDNDNTVSSVKVGNSRIEFSGKGEQQDNQESSLLGKLFGIL 246
>gi|325274796|ref|ZP_08140824.1| flagellar basal body L-ring protein [Pseudomonas sp. TJI-51]
gi|324100064|gb|EGB97882.1| flagellar basal body L-ring protein [Pseudomonas sp. TJI-51]
Length = 198
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 22/213 (10%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R L + LL GC + + P +P+ +
Sbjct: 1 MNRLLSVFALGGAVLLAGCVA-PTPKPNDPYYAPVLP--------------RTPLPAAAN 45
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ S+++ L+ D +A VGDI+T+ + A + + ++N+ + L+ F
Sbjct: 46 NGSIYQAGFEQNLYSDRKAFRVGDIITITLNEKTSASKNAGSQIAKNSKTNIGLTSLFGG 105
Query: 119 FGQ-----QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ Y G A+ G ++ L I V +L NG + + G +
Sbjct: 106 TPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEK 165
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKI 206
+ +N + + G+VR D+ N+V ++
Sbjct: 166 WLTLNTGEELVRIAGMVRADDIATDNTVPSTRV 198
>gi|331005446|ref|ZP_08328825.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC1989]
gi|330420722|gb|EGG95009.1| Flagellar L-ring protein FlgH [gamma proteobacterium IMCC1989]
Length = 190
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 57 TKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ SL+ D ++ +L D + L+ GDI+TV + A T R+ + L+G
Sbjct: 19 QASANSLYSDSNYVSLHSDKKKLSQGDIVTVLVYEQASASTSAGTDTERDTEISGTLTGT 78
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
D G SG GSISR KL ++ V ++L +G+++I G Q +
Sbjct: 79 ---------NKTRRAGLDIGSDFSGGGSISREGKLIASVSVKVKSVLSSGDMVIKGQQLI 129
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
NDE + +N+ G +RP D+ N+V +IA+ARI+Y G G + +P +L+ L
Sbjct: 130 EFNDETQFINIEGTIRPSDISPDNTVLSTRIADARITYKGDGLLGKQQQPGFFSKLMGWL 189
Query: 236 S 236
Sbjct: 190 F 190
>gi|326319100|ref|YP_004236772.1| flagellar L-ring protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323375936|gb|ADX48205.1| flagellar L-ring protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 251
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 84/223 (37%), Gaps = 14/223 (6%)
Query: 16 FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLW-RDSHAALFKD 74
GC S + + + + + SL+ S+ F+D
Sbjct: 41 TGCASVNPPPPIDMPPT-----------QAPIAVQTAPRATGPATGSLFHAASYRPAFED 89
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
RA VGDI+T+ I A + + R + ++ + ++ L +
Sbjct: 90 RRARLVGDIVTIQIVETISASQKSSSKVDRTAANTAGVTAFPFIGASDIGKLK--LGGNS 147
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
GKG + I V +L NG+L+I+G +++ V + + L +G V P+
Sbjct: 148 TNNFEGKGDLQSTNTFTGTITTTVVDVLPNGHLVIAGEKQIGVAENVDVLRFSGTVDPRS 207
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + VS +A AR+ G+G E + +++P
Sbjct: 208 LQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAP 250
>gi|21672607|ref|NP_660674.1| flagellar basal body L-ring protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008453|sp|Q8K9K3|FLGH_BUCAP RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|21623238|gb|AAM67885.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 238
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 46 FLGIDFKNSDSTKKSYSLWRD------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
N K+ SL+++ + LF+D R+ N+GD +TV ++ + A +
Sbjct: 36 ITTAIAPNIIPKIKNGSLFQEKTPINYGYQPLFEDHRSHNIGDTITVVLQENISASNSSS 95
Query: 100 TGRSRNNSLHRKLSGGFS----LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
+ +R+ + ++ + G ++ G SGKGS S LI
Sbjct: 96 SNLTRDGKANVGVTVTPGTLNPILGLNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLIT 155
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL + G ++V +N + +G++ P +++ +N V+ +IA+ RI Y
Sbjct: 156 VTVKNVLPNGNLKVIGEKQVAINQGTEFIRFSGVINPNNINKNNLVASTQIADTRIEYVS 215
Query: 216 KGRTTELLRPPIGHQLIENLSPL 238
R ++ + + + +SP+
Sbjct: 216 NNRINDIQKMGWLQRFLLKISPI 238
>gi|297538899|ref|YP_003674668.1| flagellar L-ring protein [Methylotenera sp. 301]
gi|297258246|gb|ADI30091.1| flagellar L-ring protein [Methylotenera sp. 301]
Length = 228
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 83/229 (36%), Gaps = 22/229 (9%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR- 65
IVL L C +P + + P + + +++
Sbjct: 17 IVLASCLLFNACA-----------FTP-----ETVVKQPMTAKPTAVTPVKSNNGAIFNV 60
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
++ LF+D R VGD +T++I + + ++ S++ ++ F
Sbjct: 61 AAYHPLFEDRRPRYVGDTVTINIIENTNTTKNFESNGSKDGKAANSITSLFG-----HNV 115
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + + K + N I V +L NGNL +SG +++ + +
Sbjct: 116 PAASFSGSSSNSVKEKEDAKSSNVFNGSITVTVIDVLPNGNLSVSGEKQISFDRGTEFVR 175
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+G+V P + N V +K+A+ARI Y + + + +
Sbjct: 176 FSGVVSPDSITVGNFVPSNKVADARIEYRTNTKVDAASIAALVARFFLS 224
>gi|312880333|ref|ZP_07740133.1| flagellar L-ring protein [Aminomonas paucivorans DSM 12260]
gi|310783624|gb|EFQ24022.1| flagellar L-ring protein [Aminomonas paucivorans DSM 12260]
Length = 202
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW++ A LF D + VGDI+TV ++ + +T + + +
Sbjct: 36 SLWQED-ANLFTDRKPSKVGDIVTVLVQETTDTKDEGKTTAKKTDKSGVQ-------DWT 87
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
++G G R + I +VT I GNL++ G++++ E
Sbjct: 88 GVFDFLRGFVIGAASDTTGDGKSERKHHIKTSIGCVVTEITPGGNLVLLGTRDLMTQAEK 147
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
++ TG+VRP+D+ +N+VS +++A A I GKG + L +P I Q+++++
Sbjct: 148 MQVSFTGVVRPEDIGPNNTVSSNRVANAEIRVEGKGSISRLQKPGIFTQILQSIF 202
>gi|300311355|ref|YP_003775447.1| flagellar basal-body L-ring protein [Herbaspirillum seropedicae
SmR1]
gi|300074140|gb|ADJ63539.1| flagellar basal-body L-ring protein [Herbaspirillum seropedicae
SmR1]
Length = 219
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 91/239 (38%), Gaps = 23/239 (9%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M ++ L + GC + I P+ S +
Sbjct: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVAGPK----------------SARPQPASYAPPT 44
Query: 60 SYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S ++++ + + L +D RA VGD LT+ I A + S+ +++ + F
Sbjct: 45 SGAIFQGAVYRPLLEDRRARLVGDTLTIVINEKTSAGKSAASSASKTGAVNSPVPTFFGT 104
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
++ N KG+ + + I V +L NGNL+++G ++V ++
Sbjct: 105 SIKELT-----ANGSSSAKFDDKGATTSSNTFTGTIGVTVVEVLPNGNLVVAGEKQVALD 159
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ + +G V P ++ N+VS +A+A++ Y R + ++SP
Sbjct: 160 KGVEYVRFSGTVSPDNIQTGNTVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSISP 218
>gi|309388848|gb|ADO76728.1| flagellar L-ring protein [Halanaerobium praevalens DSM 2228]
Length = 194
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW D L++D ++GDI+TV I + A+ + S++++ + G
Sbjct: 27 SLWSDESQDLYQDYPDYHLGDIITVMIEENASAIQSANSDASQSSNYNAA-------EGG 79
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
++ + + G R+ L I + + ENGNL I G++ V++N EI
Sbjct: 80 GILDFIPFFDFSYSDSETADGETQRSGTLQADITTEIVGLQENGNLKIRGNKRVKINGEI 139
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+++ + G++RP+D++ N +S +++ A I Y G+G + + ++ +
Sbjct: 140 QTIVLEGVIRPKDINFDNEISSKRVSNANIEYEGEGVVGDKQNSGLLTKVFNFIF 194
>gi|83716377|ref|YP_438392.1| flagellar basal body L-ring protein [Burkholderia thailandensis
E264]
gi|110816522|sp|Q2T8V7|FLGH2_BURTA RecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body
L-ring protein 2; Flags: Precursor
gi|83650202|gb|ABC34266.1| flagellar L-ring protein FlgH [Burkholderia thailandensis E264]
Length = 217
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 7/199 (3%)
Query: 39 DENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ + + +S ++ A +L D RA GD LTV + QA
Sbjct: 22 PRPDFADDDLPPIATAPAAGRSGGVFNAVTAWSLASDGRAYRPGDTLTVTLEETTQASKR 81
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
T +N + K F + + ++ G GS S+ L I I
Sbjct: 82 ADTKFGKNGDMAVKPGVLFG------STVPFDSSFGAKRNFDGGGSSSQQNTLRGEITVI 135
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L G L + G + + +N + ++G VR D+D +N VS +IA ARI Y GKG
Sbjct: 136 VNQVLAGGLLQVKGEKVLSLNQGEEVMRLSGYVRQADIDTNNRVSSRRIANARIKYVGKG 195
Query: 218 RTTELLRPPIGHQLIENLS 236
++ + +
Sbjct: 196 ALSDSNSAGWLTRFFNSPW 214
>gi|167614840|ref|ZP_02383475.1| flagellar basal body L-ring protein [Burkholderia thailandensis
Bt4]
gi|257141425|ref|ZP_05589687.1| flagellar basal body L-ring protein [Burkholderia thailandensis
E264]
Length = 218
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 7/199 (3%)
Query: 39 DENNRMPFLGIDFKNSDSTKKSYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFD 97
+ + + +S ++ A +L D RA GD LTV + QA
Sbjct: 23 PRPDFADDDLPPIATAPAAGRSGGVFNAVTAWSLASDGRAYRPGDTLTVTLEETTQASKR 82
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
T +N + K F + + ++ G GS S+ L I I
Sbjct: 83 ADTKFGKNGDMAVKPGVLFG------STVPFDSSFGAKRNFDGGGSSSQQNTLRGEITVI 136
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L G L + G + + +N + ++G VR D+D +N VS +IA ARI Y GKG
Sbjct: 137 VNQVLAGGLLQVKGEKVLSLNQGEEVMRLSGYVRQADIDTNNRVSSRRIANARIKYVGKG 196
Query: 218 RTTELLRPPIGHQLIENLS 236
++ + +
Sbjct: 197 ALSDSNSAGWLTRFFNSPW 215
>gi|315635631|ref|ZP_07890894.1| flagellar basal body L-ring protein FlgH [Arcobacter butzleri JV22]
gi|315479928|gb|EFU70598.1| flagellar basal body L-ring protein FlgH [Arcobacter butzleri JV22]
Length = 234
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 27/248 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + S L GC S +I + P + I K ++ K
Sbjct: 1 MKLVIYISLTSLLFLGCASQEPDI---------------HFEKPEIQIPKKAPEAKKNKG 45
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ +LF D + L +GDI+ + I+ D A DN+ + N + + +
Sbjct: 46 SLYSMQGTSLFADKKDLQIGDIIQIIIKEDLTAKSDNKRELTNNRNNNLGGGLFTPMGTN 105
Query: 122 QTPQ------------MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + + GK E + I+AI+ +NGN I
Sbjct: 106 TLGGVAESITNESNRSLGVDFGTQSTNSDKGKVKTQFNETFDTTISAIIEETYQNGNYYI 165
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G +E+ + + + + ++G++RP D+ + NS++ +IA ++ Y G +++L P G
Sbjct: 166 RGEKEMLIEGQKQKIIISGVIRPYDITSDNSINSSQIANLKLLYNKDGTESDILDTPWGL 225
Query: 230 QLIENLSP 237
+ + P
Sbjct: 226 NFMRKIWP 233
>gi|157736471|ref|YP_001489154.1| flagellar basal body L-ring protein FlgH [Arcobacter butzleri
RM4018]
gi|157698325|gb|ABV66485.1| flagellar basal body L-ring protein FlgH [Arcobacter butzleri
RM4018]
Length = 234
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 27/248 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + S L GC S +I + P + I K ++ K
Sbjct: 1 MKLVIYISLTSLLFLGCASQEPDI---------------HFEKPEIQIPKKAPEAKKNKG 45
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ +LF D + L +GDI+ + I+ D A DN+ + N + + +
Sbjct: 46 SLYSMQGTSLFADKKDLQIGDIIQIIIKEDLTAKSDNKRELTNNRNNNLGGGLFTPMGTN 105
Query: 122 QTPQ------------MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + + GK E + I+AI+ +NGN I
Sbjct: 106 TLGGVAESITNESNRSLGVDFGTQSTNSDKGKVKTQFNETFDTTISAIIEETYQNGNYYI 165
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G +E+ + + + + ++G++RP D+ + NS++ +IA ++ Y G +++L P G
Sbjct: 166 RGEKEMLIEGQKQKIVISGVIRPYDITSDNSINSSQIANLKLLYNKDGTESDILDTPWGL 225
Query: 230 QLIENLSP 237
+ + P
Sbjct: 226 NFMRKIWP 233
>gi|332994664|gb|AEF04719.1| flagellar L-ring protein [Alteromonas sp. SN2]
Length = 293
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 89/242 (36%), Gaps = 14/242 (5%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS------ 60
+ L + GC ++S + SP +++ P +
Sbjct: 52 VFLALIFTMTGCAQTVSHEEEVVASSPTNPKVEQRAISPTSDEPAPGDPTYAPPRAYSVE 111
Query: 61 ------YSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
SL+ L++ VGD++ + + Q+ + +N++ +
Sbjct: 112 QVRIPSGSLFNPELAMGLYQRHSQYKVGDMILIKLDETTQSEKSLDYNQDKNSTFDIE-P 170
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+ G Q + ++++ + S++ L I VTAI GNL+++G +
Sbjct: 171 LTVRVGGIQIEGDDLEVDHEQDSEFTSSAQSSQSNSLQGSITVYVTAITPAGNLLVTGEK 230
Query: 174 EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
+ +N + +G VR QDVD N+V K+ A I Y G G E + +L
Sbjct: 231 WITMNKGKEYIRFSGEVRKQDVDESNTVVSSKVGNALIEYSGTGDLQENQERSVIDKLFA 290
Query: 234 NL 235
Sbjct: 291 IF 292
>gi|186477527|ref|YP_001858997.1| flagellar L-ring protein [Burkholderia phymatum STM815]
gi|184193986|gb|ACC71951.1| flagellar L-ring protein [Burkholderia phymatum STM815]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 21/239 (8%)
Query: 1 MYRYSFIVLCYSSL--LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R ++ + L GC S+ I P L +
Sbjct: 6 MPRTVAVLTGTIAFYVLAGCGSTKDSIVDTP----------------MLPPLASAPINVN 49
Query: 59 KSYSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S+++ + L ++ RA ++GD+LT+ + SR + + + + +
Sbjct: 50 TQGSIYQAGQSLLLYETPRAQHIGDVLTIRLSESYTGSNSANAQASRASDITAEAADKST 109
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ ++ + G+GSI+ + +A V + GNL++SG + + +
Sbjct: 110 GTAARLARLFNIGSA--STTFKGQGSIADTSGMTGTLAVTVIGTMPTGNLVVSGEKLISM 167
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
L ++GIV P+D++ N V+ K+A ARI G+G + ++ ++
Sbjct: 168 GGNRDRLRLSGIVNPKDIETGNYVASSKVANARIEQAGQGMLADSTTLGWLQRMFMSVL 226
>gi|260886213|ref|ZP_05897476.1| flagellar L-ring protein FlgH [Selenomonas sputigena ATCC 35185]
gi|330839791|ref|YP_004414371.1| flagellar L-ring protein [Selenomonas sputigena ATCC 35185]
gi|260863932|gb|EEX78432.1| flagellar L-ring protein FlgH [Selenomonas sputigena ATCC 35185]
gi|329747555|gb|AEC00912.1| flagellar L-ring protein [Selenomonas sputigena ATCC 35185]
Length = 201
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRDS----HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
T + SLW D+ +F D +A NVGD LT+ I ++ S
Sbjct: 23 APTVFAQSLWADATEGTSYGVFADRKAHNVGDTLTIVISEKTTTTQTKSRKNGKSASTKL 82
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + GS + + IA V + NGN+++
Sbjct: 83 NA-------GAGIFDFLTAASAGGSDSWKADGSAKDSSNFSGNIAVTVVEVQPNGNMVVE 135
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + + + GIVR DV N+V K+A+A + + GKG R I Q
Sbjct: 136 GTQSIWQNKDEHKITLRGIVRRDDVTYENTVPSTKVADATVRFDGKGPLNAKQRQGILTQ 195
Query: 231 LIENLS 236
++ L
Sbjct: 196 ILNILF 201
>gi|326386933|ref|ZP_08208547.1| Flagellar L-ring protein precursor, putative [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208613|gb|EGD59416.1| Flagellar L-ring protein precursor, putative [Novosphingobium
nitrogenifigens DSM 19370]
Length = 251
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 6/210 (2%)
Query: 30 QMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR--DSHAALFKDSRALNVGDILTVD 87
+ P + R F + + + S++ +A L + +RA VGD +T+
Sbjct: 45 ALRPAPAHAVTKPRPGFEAVLPSAPPANPATGSIFNVNAGYAGLVEGTRAHTVGDAVTIV 104
Query: 88 IRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRA 147
+ + + ++ S G + + LN G A +G+G+ S+
Sbjct: 105 LVENFNSSKSATGKTQKSGSFAFTPPT----KGPLSLLSSNALNSSGAAAFNGQGNASQT 160
Query: 148 EKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIA 207
L IA + + NG ++ G + + ++ + +GI+R DVD +N + ++A
Sbjct: 161 STLGGNIAVTIAEVRRNGTALVKGEKRLLLSQGDEWVQFSGIIRLADVDQYNQIQSSQVA 220
Query: 208 EARISYGGKGRTTELLRPPIGHQLIENLSP 237
+AR+ Y G G R + ++P
Sbjct: 221 DARMIYTGNGSILRASREGWLAKFFSFVNP 250
>gi|291277382|ref|YP_003517154.1| putative flagellar L-ring protein precursor [Helicobacter mustelae
12198]
gi|290964576|emb|CBG40429.1| putative flagellar L-ring protein precursor [Helicobacter mustelae
12198]
Length = 231
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 26/246 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ +L S LL P++ E DF
Sbjct: 1 MKFLHFLLAGSVLLA----------YQPEIEMNPPEYVEEMPARDFVPDFAKP------G 44
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS-----GGF 116
SL+ LF D RA+ D++TV I + A + + + N+S + G
Sbjct: 45 SLFGQGDKPLFSDRRAMRPYDLITVIINENSSANYSSSKSYNNNSSGNSTSPRLQYNGTD 104
Query: 117 SLFGQQTPQMNGNLNYDGG-----GASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+QT ++ NY G G+ S++E L+L+I A + +LENGN I G
Sbjct: 105 PNRLRQTQDLDDRTNYTMTKPSSNSTFKGGGTQSKSESLSLVITARIVKVLENGNYFIYG 164
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQL 231
+++ V+ E + + V+G+VRP D++ N+V +A+A+I Y G + +
Sbjct: 165 KKDILVDGEKQMIEVSGVVRPYDINRDNTVESKYLADAKIQYANVGDLSNTSKKKFATDA 224
Query: 232 IENLSP 237
++ P
Sbjct: 225 MDTEYP 230
>gi|289812383|ref|ZP_06543012.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 144
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%)
Query: 96 FDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
++ SR+ ++ GG + +GKG + + + +
Sbjct: 2 KARRSNASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLT 61
Query: 156 AIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGG 215
V +L NGNL + G +++ +N + +G+V P+ + NSV ++A+ARI Y G
Sbjct: 62 VTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVG 121
Query: 216 KGRTTELLRPPIGHQLIENLSPL 238
G E + NLSP+
Sbjct: 122 NGYINEAQNMGWLQRFFLNLSPM 144
>gi|94969952|ref|YP_592000.1| flagellar L-ring protein [Candidatus Koribacter versatilis
Ellin345]
gi|94552002|gb|ABF41926.1| flagellar L-ring protein [Candidatus Koribacter versatilis
Ellin345]
Length = 240
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 22/245 (8%)
Query: 1 MYRYSFIVLCYS-----SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M + + + ++ +L S +P+ M L +
Sbjct: 3 MRKIKYAGVPFAFALWLLILGAVVSQAHAEKREKDKNPLQ------RYMATLPAQETGAL 56
Query: 56 STKKSYSLWRDSHAALF---KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
K + SLW D LF D +A V DI+T+ + A R+ + + +
Sbjct: 57 PAKTTGSLWTDES-PLFMIANDLKARRVHDIVTIAVSESTLAQATGDVTSQRDYAGNSAI 115
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
+ T +N + GKG+ + L +AA V A++ NGN+++
Sbjct: 116 TALGGH--VSTGGVNPLFAASSSTSLKGKGASNSQSTLRTTLAAEVVAVMTNGNMVVEAR 173
Query: 173 QEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRP-----PI 227
+ V++N+E+R++ + G+VRP D+ N VS +A I GKG ++ RP
Sbjct: 174 RSVKMNNELRTVILRGVVRPGDISPSNVVSSAALANLEIEMKGKGVVSDGTRPNNLGIRW 233
Query: 228 GHQLI 232
+++
Sbjct: 234 LWKVL 238
>gi|238927615|ref|ZP_04659375.1| flagellar L-ring protein [Selenomonas flueggei ATCC 43531]
gi|238884540|gb|EEQ48178.1| flagellar L-ring protein [Selenomonas flueggei ATCC 43531]
Length = 213
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRD----SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
T + SLW++ + A+F D RA VGDI+T+ I + ++ S+
Sbjct: 35 APTAAAESLWKNTNGYATKAVFADHRASGVGDIVTIVISESTTTSATRNSANEKSGSVKL 94
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + KGS S ++ + ++ I +GN ++
Sbjct: 95 G-------GGIGIFDFLQAASASGSDKFTAKGSASATNRVAGNVTVTISEITPSGNFVLE 147
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + GI RP+D+ A N+V ++A+A + + GKG R I Q
Sbjct: 148 GTQSIWQNRNEHKITFRGICRPEDISASNTVLSTRVADATVRFDGKGPLNAKQRQGILTQ 207
Query: 231 LIENLS 236
+ L
Sbjct: 208 IFNILF 213
>gi|295111396|emb|CBL28146.1| Flagellar basal body L-ring protein [Synergistetes bacterium SGP1]
Length = 200
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ SLW D D R VGD++TV + A + +++S
Sbjct: 27 AGAADAASLWDD-RTNWIVDVRPGRVGDVVTVLVNERTNAKDEATMDLKKSSSNSVS--- 82
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
G + L+ +S+G GS R +A +VT +L NGNL+I G+++
Sbjct: 83 ----DGTGILKFIRALSLTSKNSSAGDGSFERKHHATATVACLVTEVLPNGNLVIEGTRD 138
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
VR ++E + + G++RPQDV++ N ++ +A A ++ G+G +P I Q+++
Sbjct: 139 VRTSEETLQIQLVGVIRPQDVNSDNQINSSLVANAELAVKGRGAIARTQKPGIISQILQA 198
Query: 235 LS 236
+
Sbjct: 199 VF 200
>gi|283780139|ref|YP_003370894.1| flagellar L-ring protein [Pirellula staleyi DSM 6068]
gi|283438592|gb|ADB17034.1| flagellar L-ring protein [Pirellula staleyi DSM 6068]
Length = 242
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 95/243 (39%), Gaps = 8/243 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +L+ +S+ P S + S + N P + +
Sbjct: 1 MNNRRQWIGQALALVVATSTSVVHADDGPN-SSLFSGRMQTNLQPAMQPGMPAMSAAPGL 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR------KLSG 114
S L + + V DI+T+ + + Q V +++ +N + KL G
Sbjct: 60 GSPSSWYETPL-PPPKEVRVNDIITIRVDLGSQVVSESEFQSRKNAQYNLLLSEWIKLDG 118
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
S+ +N + G + E++ IAA V ++L NGNL++ +
Sbjct: 119 LKSVKPTGMADGEPQINGSLNQLNRVTGELETTEQIKFEIAATVASVLPNGNLVVEAHRS 178
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
V+ N E +++G+VR +D+ N V +A +IS G+ + R ++ ++
Sbjct: 179 VQNNHEQWMHSLSGVVRREDIGPGNIVLSKDMANLQISKRENGQVRDTYRRGWVNRWLDT 238
Query: 235 LSP 237
+P
Sbjct: 239 FNP 241
>gi|171321212|ref|ZP_02910182.1| flagellar L-ring protein [Burkholderia ambifaria MEX-5]
gi|171093522|gb|EDT38692.1| flagellar L-ring protein [Burkholderia ambifaria MEX-5]
Length = 211
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 63 LWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
L+R D+ +L D RA +GDI+T+ + A T S++ +S +
Sbjct: 43 LYRPDAFQSLIADRRASAIGDIVTILVYEQSSASQTADTSTRTGFSINGSVSTLY----- 97
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
N G G+G I R+ +L ++A+V +L NG+L ++G Q + VN E
Sbjct: 98 ---AGNNRAQVGAGDDYGGRGQIQRSGRLLAQLSAVVVDVLPNGDLAVAGEQRIDVNGEK 154
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+ + G VR D+ N+V ++A+ARI Y G G T+ +P + + L
Sbjct: 155 TGIRLNGRVRAIDIGPGNTVLSTRLADARIDYTGDGFVTDRTKPGLIPRFFAWL 208
>gi|302878279|ref|YP_003846843.1| flagellar L-ring protein [Gallionella capsiferriformans ES-2]
gi|302581068|gb|ADL55079.1| flagellar L-ring protein [Gallionella capsiferriformans ES-2]
Length = 259
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 84/244 (34%), Gaps = 29/244 (11%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ C + + GC S+ + P + +++
Sbjct: 30 LFCIAISIAGCS---------------ISTPPTRIQQPMTVKPVRPVVVVPADGAIFHAG 74
Query: 68 --HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
LF+D RA NVGDILT++I G + NS+ +
Sbjct: 75 INERPLFEDKRARNVGDILTINIAETTSGSRKASDGSTSANSIAAGTPSVGRNYAANGGA 134
Query: 126 MNGNLNYDGGGASSGKGSI--------SRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ + + S + +E L IA V +L NGNL++SG ++V +
Sbjct: 135 AAALTSLINPISINSSSSNKTASSGNGAASETLTGTIAVTVIEVLANGNLLVSGEKQVAL 194
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGR----TTELLRPPIGHQLIE 233
N + +G++ P + N V ++A+A I Y G + +
Sbjct: 195 NQNEEFIRFSGVINPVSISNLNVVQSSQVADAHIEYKNAGAMNQFMNDASSLGFLGRFFM 254
Query: 234 NLSP 237
++ P
Sbjct: 255 SVLP 258
>gi|291613041|ref|YP_003523198.1| flagellar L-ring protein [Sideroxydans lithotrophicus ES-1]
gi|291583153|gb|ADE10811.1| flagellar L-ring protein [Sideroxydans lithotrophicus ES-1]
Length = 223
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 75/203 (36%), Gaps = 4/203 (1%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--HAALFKDSRALNVGDILTVDIRIDDQA 94
+ + K + ++++ +F+D RA NVGD+LT++I A
Sbjct: 22 PSTSIKQPLTALPEPKPKVEAVGNGAIFQAGMNERPMFEDRRARNVGDVLTINIVETTAA 81
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + SL G + S S + + I
Sbjct: 82 SGKSGHDDTNTGSLALTTPAI--TAGGVGKNTSFGATGSSSVKSGSASDSSGSNTFSGAI 139
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
VT +L NGNL ++G ++V + + +G+V P + N+V ++A+ + Y
Sbjct: 140 TVTVTEVLPNGNLRVAGEKQVAIKLSEEYVRFSGVVNPATISGTNTVQSTQVADVHVEYK 199
Query: 215 GKGRTTELLRPPIGHQLIENLSP 237
G + +++ ++ P
Sbjct: 200 GANNIDTAAVISMFNRIFYSVLP 222
>gi|304438317|ref|ZP_07398258.1| flagellar L-ring protein FlgH [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368683|gb|EFM22367.1| flagellar L-ring protein FlgH [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 199
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRDSHA----ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
T + SLW++++ ++F D RA NVGDI+T+ I + ++ S+
Sbjct: 21 APTAAAESLWKNANGYTTKSVFTDHRASNVGDIVTIVISESTTTSATRNSSNEKSGSVKL 80
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + KGS S ++ + ++ I GN ++
Sbjct: 81 G-------GGIGIFDFLQAASASGSDKFTAKGSASATNRVAGNVTVTISEITPAGNFVLE 133
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + GI RP+D+ A N+V ++A+A + + GKG R I Q
Sbjct: 134 GTQSIWQNRNEHKITFRGICRPEDISASNTVLSTRVADATVRFDGKGPLNAKQRQGILTQ 193
Query: 231 LIENLS 236
+ L
Sbjct: 194 IFNILF 199
>gi|241765793|ref|ZP_04763734.1| flagellar L-ring protein [Acidovorax delafieldii 2AN]
gi|241364304|gb|EER59454.1| flagellar L-ring protein [Acidovorax delafieldii 2AN]
Length = 181
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
S+ F+D RA VGD +T+ I + A ++ + R +S ++ + T
Sbjct: 2 AASYRPAFEDRRARMVGDTVTIRIEENITAKQNSTSTVDRKSSNEAGITALPFVGSSFTD 61
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ L +G G+ + + + I V +L NG+L+++G +++ VND + L
Sbjct: 62 K--TKLGSANDSKFTGTGNTASSNTFDGYITTTVVEVLPNGHLVVTGEKQIGVNDNVDVL 119
Query: 185 NVTGIVRPQDV--------DAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+G V P+ + + + +S +A AR+ G+G E + ++
Sbjct: 120 RFSGTVDPRSLRTGTGGYEGSGSVISSRLVANARVQSRGRGAQGEAQAMGWLARAFNTIT 179
Query: 237 P 237
P
Sbjct: 180 P 180
>gi|292669968|ref|ZP_06603394.1| flagellar L-ring protein FlgH [Selenomonas noxia ATCC 43541]
gi|292648380|gb|EFF66352.1| flagellar L-ring protein FlgH [Selenomonas noxia ATCC 43541]
Length = 213
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRDSHA----ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ SLW++ + +F D RA +VGDI+T+ I + ++ S++
Sbjct: 35 APAVSAESLWKNPNGYPTKNVFADHRATSVGDIVTIIISENTTTTASRNNSNEKSGSVNI 94
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + KGS S + + VT I GN I+
Sbjct: 95 GA-------GIGIFDFLKAASASGSDKFTAKGSASSTNRAIGNVTVTVTEITPGGNFILE 147
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + G+ RP+D+ + N++ ++A+A + + GKG R I Q
Sbjct: 148 GTQSIWQNRNEHKITFRGMCRPEDISSSNTILSTRVADATVRFDGKGPLNAKQRQGILTQ 207
Query: 231 LIENLS 236
+ L
Sbjct: 208 IFNILF 213
>gi|307731194|ref|YP_003908418.1| flagellar L-ring protein [Burkholderia sp. CCGE1003]
gi|307585729|gb|ADN59127.1| flagellar L-ring protein [Burkholderia sp. CCGE1003]
Length = 222
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 92/231 (39%), Gaps = 19/231 (8%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ LC +++L C S P + ++++
Sbjct: 8 VALCAAAVLSACAS----------------GERSIVETPMAPPLVSAPLNVNTQGAIYQA 51
Query: 67 SH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
L++ RA ++GD+LT+ + + SR +S+ + + + +
Sbjct: 52 GTLMVLYETPRAQHIGDVLTIRLSESYSGNNSSTAAASRASSITADAADKSTGAAARLAR 111
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + G+GS++ + +A V + GNLI+SG + + ++ L
Sbjct: 112 LFNIGSA--STDFKGQGSLTDVSGMTGTLAVTVIGTMPTGNLIVSGEKVISMSGNRDRLR 169
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
++G+V P+D++A N V+ K+A ARI G G ++ ++ ++
Sbjct: 170 LSGVVNPKDIEAGNYVASSKVANARIEQAGTGMISDATTMGWLQKMFLSVL 220
>gi|254440259|ref|ZP_05053753.1| flagellar L-ring protein FlgH [Octadecabacter antarcticus 307]
gi|198255705|gb|EDY80019.1| flagellar L-ring protein FlgH [Octadecabacter antarcticus 307]
Length = 162
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 69 AALFK-DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
LF + RA VGD+LTV + QA+ ++S+ L +
Sbjct: 1 MGLFAVEQRASRVGDVLTVALNESFQAIKSQSASAGNSDSVTADLPNFLGM--------- 51
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+L++ +G G+ +++ L+ + + NGNL + G +++ +N+ + V+
Sbjct: 52 NDLSFSSDQTFAGSGAAAQSNSFTGLVTVSIVRVFSNGNLEVLGQKKLTLNNGDEYVRVS 111
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
GIVR D+ N V+ ++IA A I+Y G G + R + +++ +L
Sbjct: 112 GIVRRSDISPSNVVNSNRIANAEITYIGAGDVADTGRRGLFSRVLSSL 159
>gi|288574699|ref|ZP_06393056.1| flagellar L-ring protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570440|gb|EFC91997.1| flagellar L-ring protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 191
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW+D D R VGDI+ V++ + +T ++ +
Sbjct: 21 ASGQSLWQDG-TNYIGDDRPSRVGDIVMVEVDERTDTEDEAKTETTKEGGANVS------ 73
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G L+ S+G GS R+ + + +VT +L NGNL+I G+++++
Sbjct: 74 -EGTGILDFIKGLSLTSSTTSTGDGSSERSYRTRAKVTCVVTEVLPNGNLVIEGTRDLQT 132
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
+ E + G +RPQDVD N++S +++A + GKG T L +P I Q+++ +
Sbjct: 133 HGETLKMRFRGAIRPQDVDGDNTISSERVANVDLIVDGKGTLTRLQKPGILTQILQAIF 191
>gi|254499118|ref|ZP_05111808.1| flagellar L-ring protein [Legionella drancourtii LLAP12]
gi|254351657|gb|EET10502.1| flagellar L-ring protein [Legionella drancourtii LLAP12]
Length = 201
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 77/201 (38%), Gaps = 10/201 (4%)
Query: 36 SSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNVGDILTVDIRIDDQA 94
+ + + T + +L+ + + L D +A GD+LTV + A
Sbjct: 7 YGQPHPTTLIIGLLLIITASPTTWAVNLFDEDIYRPLIADRKATLPGDVLTVIVLETSNA 66
Query: 95 VFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ ++ + N + + G S R K+ +
Sbjct: 67 QTSADLSSHKE---------IKTVLEAGYNRDNHKVEFGLEGKGSTAAKTGRNGKIKAAL 117
Query: 155 AAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
+ + N ++ G Q + +N E + + ++G+VRP+D+ N++ ++A+A I+Y
Sbjct: 118 TVRIKEVFPNNTYLVEGLQMITINGEQQRILLSGVVRPEDISPQNTILSTRLAQAHITYT 177
Query: 215 GKGRTTELLRPPIGHQLIENL 235
G G + ++++ +
Sbjct: 178 GAGSVSNSQDRNYIYKILSFI 198
>gi|225850283|ref|YP_002730517.1| flagellar L-ring protein FlgH [Persephonella marina EX-H1]
gi|225645874|gb|ACO04060.1| flagellar L-ring protein FlgH [Persephonella marina EX-H1]
Length = 151
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 90 IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN-GNLNYDGGGASSGKGSISRAE 148
+ + SR++S+ + Q + L G G R
Sbjct: 2 ENISGSGSANSSGSRDSSVDLDFPSPTIMGKQTPNKSPIAGLKAGSKNNFKGTGKTDRKA 61
Query: 149 KLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAE 208
KL I+A V + NGNL I G + V++N++ + L ++GIV+P ++ NSV D+I++
Sbjct: 62 KLIATISARVVKVYPNGNLFIVGKKIVKINEDEQILKISGIVKPTYIEQDNSVLSDRISD 121
Query: 209 ARISYGGKGRTTELLRPPIGHQLIENLSP 237
+ Y GKG + +P + + + P
Sbjct: 122 MYVEYNGKGFIADNQKPGWLSRFLVKIWP 150
>gi|182412219|ref|YP_001817285.1| flagellar L-ring protein [Opitutus terrae PB90-1]
gi|177839433|gb|ACB73685.1| flagellar L-ring protein [Opitutus terrae PB90-1]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 55 DSTKKSYSLW---RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ + S+W + ++ D +A +GDILT+ + A SR++S+
Sbjct: 26 GAPAFAGSIWPTDQARERSMIADKKASGIGDILTIVVSETAIAQSSQSKKSSRDSSIEDA 85
Query: 112 LSGGFSLFGQQTP--QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
+ + L G + SG G IS + L+ A +VT +L NGN +I
Sbjct: 86 VQQFLYANSRALTHRGGLPGLKLGGSASYSGGGDISNTQSLSARAAVLVTDVLPNGNFVI 145
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGH 229
G++ V + E + + + G+VR DV N+V+ IA+AR+ + +G+ T+ +
Sbjct: 146 EGTRIVTFSGETQYVVLHGLVRADDVGRDNTVASSNIADARVEFYSEGQLTDAQKRGWFA 205
Query: 230 QLIENLSP 237
+L E L P
Sbjct: 206 KLYEKLRP 213
>gi|224436779|ref|ZP_03657777.1| flagellar basal body L-ring protein [Helicobacter cinaedi CCUG
18818]
gi|313143268|ref|ZP_07805461.1| flagellar L-ring protein [Helicobacter cinaedi CCUG 18818]
gi|313128299|gb|EFR45916.1| flagellar L-ring protein [Helicobacter cinaedi CCUG 18818]
Length = 244
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
K+ SL+ LF D RA+ D++T+ I + A F + + +
Sbjct: 51 PELPKAGSLFGSGDRPLFSDRRAMKPDDLITIVINENANANFTTNKNYNGASGGNVTPPA 110
Query: 115 GFSLFGQ----------QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ G G+ +R E LN + A + +L+N
Sbjct: 111 IEYTGNNEEQKQIVQELNDQAAYNLTKANNTSNFQGGGAQTRNEALNATLTARIIKVLDN 170
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
I G +EV V+ E + L ++G+VR D+ N V IA A+I+Y G ++ R
Sbjct: 171 NTYFIHGRREVLVDGEKQILELSGVVRSFDISKDNVVQSKHIANAKIAYTSAGPISDTNR 230
Query: 225 PPIGHQLIENLSP 237
IE+L P
Sbjct: 231 KKPISDGIESLYP 243
>gi|121534938|ref|ZP_01666757.1| flagellar L-ring protein [Thermosinus carboxydivorans Nor1]
gi|121306537|gb|EAX47460.1| flagellar L-ring protein [Thermosinus carboxydivorans Nor1]
Length = 196
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 50 DFKNSDSTKKSYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
+ SLW D+ A+++ D +A VGDI+T+ I A + +++
Sbjct: 15 MLTVPAEPAAAASLWTDTGPAASMYADRKAHAVGDIITIIISESSSASRTGKAENTKSGK 74
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNL 167
+ G + + + + +G+I+ + ++ + V + NGN+
Sbjct: 75 TDLQA-------GTGIFRWLADASAGYSDSFKTQGTIANSNNVSAKLTVQVVEVKPNGNM 127
Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
++SG+Q ++ N E + + +TG+VRP DV A N+V +A+A+I G+G R +
Sbjct: 128 VVSGTQSIKQNGEEQRITITGVVRPDDVRADNTVLSTYVADAQIRIDGQGPLARKQRQGV 187
Query: 228 GHQLIENLS 236
Q++ L
Sbjct: 188 LSQILNILL 196
>gi|237750914|ref|ZP_04581394.1| flagellar l-ring protein [Helicobacter bilis ATCC 43879]
gi|229373359|gb|EEO23750.1| flagellar l-ring protein [Helicobacter bilis ATCC 43879]
Length = 237
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 48 GIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
++ SL+ LF D RA+ V D++T+ I+ + F S ++
Sbjct: 37 MPSKDFVPEFQRPGSLFGQGERPLFADRRAMRVDDLITIKIKENITNDFKIDKKYSGSSG 96
Query: 108 LHRKLSGGFSLFGQQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAI 157
+ + Q N + G G+ S+++ L L I A
Sbjct: 97 GNVTPAQMTYNGQDAQQQANTAYLNDQVNYTLTKPNNATNFQGGGTYSQSQNLALTITAR 156
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
+ ++ENGN I G QE+ VN E + + ++G+VRP D+ +N++ IA+++IS G
Sbjct: 157 ILKVMENGNYFIYGKQEMLVNGEKQIIQISGVVRPYDIQQNNTIESQYIADSKISIVSVG 216
Query: 218 RTTELLRPPIGHQLIENLSP 237
+ +E L IE+ P
Sbjct: 217 KISETLTKKPTTDAIESNWP 236
>gi|32266398|ref|NP_860430.1| flagellar basal body L-ring protein [Helicobacter hepaticus ATCC
51449]
gi|81665953|sp|Q7VHR4|FLGH_HELHP RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|32262448|gb|AAP77496.1| flagellar basal body L-ring protein FlgH [Helicobacter hepaticus
ATCC 51449]
Length = 244
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
++ SL+ LF D RA+ D++T+ I + A F + + +
Sbjct: 51 PELPRAGSLFGSGDKPLFSDRRAMKPDDLITIVISENANANFTTNKNYNGASGGNVTPPS 110
Query: 115 GFSLFGQ----------QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ G G+ +R+E LN I A + +L+N
Sbjct: 111 IEYTGNNEEQKQIVSELNDQAAYNLTKANNTSNFQGGGAQTRSEALNATITARIVKVLDN 170
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
I G +EV V+ E + L ++G+VR D+ N V IA A+I+Y G ++
Sbjct: 171 NTYFIHGRREVLVDGEKQILELSGVVRSFDISKDNVVQSKHIANAKIAYTSLGPISDTNH 230
Query: 225 PPIGHQLIENLSP 237
IE+L P
Sbjct: 231 KKPVSDGIESLYP 243
>gi|209520045|ref|ZP_03268822.1| flagellar L-ring protein [Burkholderia sp. H160]
gi|209499530|gb|EDZ99608.1| flagellar L-ring protein [Burkholderia sp. H160]
Length = 224
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 19/235 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ L +S L C S+ P + ++
Sbjct: 5 RLILALGAASCLAACSSTQQ--------------TRSIVETPMAPPLASAPLNVNTQGAI 50
Query: 64 WRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
++ L ++ RA ++GD+LT+ + N T + + +
Sbjct: 51 YQAGAPLLVYETPRAQHIGDVLTIRLAESYSG---NNTANASASRASSITATAADQSTSA 107
Query: 123 TPQMNGNLNYDGGGA-SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
++ N G+G++S + +A V + GNL++SG + + ++
Sbjct: 108 AARLAKLFNIGTASTDYKGQGNLSDISDMTGTLAVTVIGTVSGGNLVVSGEKIISMSGNK 167
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
L ++GIV P+D++A N VS K+A ARI G G + ++ ++
Sbjct: 168 DRLRLSGIVNPKDIEAGNYVSSSKVANARIEQAGIGMVNDATTMGWLQRMFLSVL 222
>gi|322432973|ref|YP_004210222.1| flagellar L-ring protein [Acidobacterium sp. MP5ACTX9]
gi|321165200|gb|ADW70904.1| flagellar L-ring protein [Acidobacterium sp. MP5ACTX9]
Length = 231
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 13/239 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R L + + G ++ + MP +
Sbjct: 1 MRRVLLFSLVLITAIPGYAGIKPVKKTAQELRADYLTRLHEQYMP--------PPDARTM 52
Query: 61 YSLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW +++ L D RA NV D + V + + A SR + ++G
Sbjct: 53 GSLWAAANSLGDLSSDYRARNVNDTIVVQVSVQTTAAQSGNVNSSRAFNTASAITGLPG- 111
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
G T N + G G+ + + + A+L NGN++I +++ +N
Sbjct: 112 -GVSTNATNPLFAANSATTLKGSGATASNTTFATSLTGQIIAVLANGNMVIEAERQISMN 170
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP-IGHQLIENLS 236
++ L + GIVRP D+ ++N++ ++ I GKG ++ +RPP + + L
Sbjct: 171 NQHEDLVIRGIVRPGDISSNNTIPSSSLSNLEIEMKGKGIISDSVRPPNALTRAVLWLF 229
>gi|32477360|ref|NP_870354.1| flagellar L-ring protein precursor FlgH [Rhodopirellula baltica SH
1]
gi|32447911|emb|CAD77431.1| probable flagellar L-ring protein precursor FlgH [Rhodopirellula
baltica SH 1]
Length = 301
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 17/233 (7%)
Query: 19 HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS---------YSLWRDSHA 69
+ + P M+ + N + + W A
Sbjct: 71 AAVMPPEFLPPGMAERVPTGTYPNDAYNPNNIPNQPAPSYDNSQPPAVGLAGVSWTYQPA 130
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS-----GGFSLFGQQTP 124
RA V DI+T+ + + + + T + R + LS G L
Sbjct: 131 P---PMRAFRVQDIVTIRVDEIARMMAEGDTEKRRVSLFQATLSEWIKLGSGGLIPDPQA 187
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ + ++ S + S+ E ++ IAA + I NGNL++ ++ RVND +
Sbjct: 188 EGDPTVDAQTTANSRAEASVESRESMSFNIAARIVDIRPNGNLVVEARKQYRVNDNLWET 247
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
+++GI R QD+ N V + + I+ +G+ + R + + L P
Sbjct: 248 SLSGICRAQDIGPDNVVLSRDLIDLEINKQDQGQLRDGYRRGWFQRAFDRLKP 300
>gi|332527718|ref|ZP_08403759.1| flagellar l-ring protein [Rubrivivax benzoatilyticus JA2]
gi|332112116|gb|EGJ12092.1| flagellar l-ring protein [Rubrivivax benzoatilyticus JA2]
Length = 231
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 35 GSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH---AALFKDSRALNVGDILTVDIRID 91
S + + + + SL++ + R ++GD L V+I
Sbjct: 22 PSPSTLSVPTAVTAVAPPSYVERAATGSLFQPGAPIATMFSGEKRPRSIGDTLKVEIDER 81
Query: 92 DQAVFDNQTGRSRNNSLHRKLSG--GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
A T SR N + K G ++ G ++ + G + GKGS + +
Sbjct: 82 LAANQKVTTNTSRENKIATKGPGTDSQNVRGALRSLLDLDAQAGGSDSFVGKGSTENSSR 141
Query: 150 LNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEA 209
+ IAA V +L NG+L+++G + + N+ + +L +G+V P D+ A N V+ I +A
Sbjct: 142 FSGRIAASVVNVLPNGHLVVAGERSIAYNEGVTTLRFSGVVNPDDIKAGNVVASADIVDA 201
Query: 210 RISYGGKGRTTELLRPPIGHQLIEN 234
R+ G+G + +++
Sbjct: 202 RLEAVGRGGVADTAARSWMQRVLSK 226
>gi|27904805|ref|NP_777931.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|31076688|sp|Q89AH6|FLGH_BUCBP RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|27904203|gb|AAO27036.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 244
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Query: 70 ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR--NNSLHRKLSGGFSLFGQQTPQMN 127
LF+D + NVGDILT+ ++ + A N++ + +
Sbjct: 72 PLFEDYKPRNVGDILTIILQENTSASNSVSNNSIHNGNSNFDIDIGNARAFDDPNGILNK 131
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
LN GKGS S LI IV IL NGNL +SGS+ + +ND I +
Sbjct: 132 IELNSSIKNNFLGKGSSSANNTFVGLITVIVDRILPNGNLEVSGSKNITINDGIEKICFY 191
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
GIV P + +NSV K+A I+Y G + +L +L
Sbjct: 192 GIVNPHTISKNNSVLSTKVANTNITYISSGPINIGSKINWLQRLFVSLF 240
>gi|254442059|ref|ZP_05055535.1| flagellar L-ring protein FlgH [Verrucomicrobiae bacterium DG1235]
gi|198256367|gb|EDY80675.1| flagellar L-ring protein FlgH [Verrucomicrobiae bacterium DG1235]
Length = 200
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 62 SLWRD---SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW + A +F D A VGDIL +++ + + S ++++
Sbjct: 21 SLWNSKKNNEAGMFADRTAARVGDILMIEVSEETIVNRSSAKTSSTDSNVGHGFDSLVLP 80
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ + +++ + +G GSIS A + I+ +V + NGNL+I G+++V +
Sbjct: 81 DILDSDTVLPSIDISPTESFNGSGSISDANIMESKISVMVVDVKPNGNLVIEGARKVMSS 140
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
E + L V GIVR DVDA+N+V + A + +G +L++
Sbjct: 141 GEAQYLVVRGIVRGDDVDANNTVLSANVLNAAVELFSEGDLKNAQTKGWVQRLVDV 196
>gi|323527541|ref|YP_004229694.1| flagellar L-ring protein [Burkholderia sp. CCGE1001]
gi|323384543|gb|ADX56634.1| flagellar L-ring protein [Burkholderia sp. CCGE1001]
Length = 223
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
P + ++++ L++ RA ++GD+LT+ + +
Sbjct: 29 DTPMAPPLVSAPLNVNTQGAIYQAGTLMVLYETPRAQHIGDVLTIRLSESYSGNNSSTAA 88
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAI 161
SR +S+ + + + ++ + G+GS++ +N +A V
Sbjct: 89 ASRASSITADAADKSTGAAARLARLFNIGSA--STEFKGQGSLTDVSGMNGTLAVTVIGT 146
Query: 162 LENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
+ +GNL++SG + + ++ L ++G+V P+D+++ N V+ K+A ARI G G ++
Sbjct: 147 MPSGNLVVSGEKVISMSGNRDRLRLSGVVNPKDIESGNYVASSKVANARIEQAGTGMISD 206
Query: 222 LLRPPIGHQLIENLS 236
++ ++
Sbjct: 207 ATTMGWLQRMFLSVL 221
>gi|224158892|ref|XP_002338021.1| predicted protein [Populus trichocarpa]
gi|222870339|gb|EEF07470.1| predicted protein [Populus trichocarpa]
Length = 349
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 62 SLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+++ L D++A VGD+LTV + + A TG R N+L LS G
Sbjct: 31 SLFQEQTFRPLMADNKAFRVGDVLTVQVFENSSATTSADTGTRRRNALSADLSHGSG--- 87
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
GG G G R ++ + V +L NG+L++ G Q + VN+E
Sbjct: 88 -----SVAQTAAGLGGTFDGGGRTQRTNRVLATLTVSVQEVLANGDLLVGGEQTLTVNEE 142
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
+ + + G VRP D+ N V ++A+ARISY G+G E R P
Sbjct: 143 PQKVTLQGRVRPLDISDGNVVLSTRLADARISYVGEGDLAERSRRP 188
>gi|330809232|ref|YP_004353694.1| flagellar L-ring protein 1 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377340|gb|AEA68690.1| putative flagellar L-ring protein 1 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 192
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
D + +L D R ++GD LTV + A TG N +
Sbjct: 29 DGYRSLTGDRRGYHLGDTLTVLVVESTSAQSAAGTGAESNTDISA---------RTGLDS 79
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
N G ++G G +R+ ++ ++ + L G L +SG Q V VNDE + +
Sbjct: 80 NTHQANLGLRGDTNGNGQTNRSGQIRTNVSVRIIEQLPEGLLRVSGEQRVTVNDEKQQVR 139
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+TG+VRP D+ +N+V ++A+A+I G G T+ + I ++++ L
Sbjct: 140 ITGLVRPDDIAYNNTVLSYRLADAQIDIVGDGVVTDAQKQNIVFRVLKWL 189
>gi|327537339|gb|EGF24072.1| flagellar L-ring protein precursor FlgH [Rhodopirellula baltica
WH47]
Length = 296
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 8/191 (4%)
Query: 52 KNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ + W A RA V DI+T+ + + + + T + R +
Sbjct: 108 SQPPAVGLAGVSWTYQPAP---PMRAFRVQDIVTIRVDEIARMMAEGDTEKRRVSLFQAT 164
Query: 112 LS-----GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
LS G L + + ++ S + S+ E ++ IAA + I NGN
Sbjct: 165 LSEWIKLGSGGLIPDPQAEGDPTVDAQTTANSRAEASVESRESMSFNIAARIVDIRPNGN 224
Query: 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPP 226
L++ ++ RVND + +++GI R QD+ N V + + I+ +G+ + R
Sbjct: 225 LVVEARKQYRVNDNLWETSLSGICRAQDIGPDNVVLSRDLIDLEINKQDQGQLRDGYRRG 284
Query: 227 IGHQLIENLSP 237
+ + L P
Sbjct: 285 WFQRAFDRLKP 295
>gi|116626488|ref|YP_828644.1| flagellar L-ring protein [Candidatus Solibacter usitatus Ellin6076]
gi|116229650|gb|ABJ88359.1| flagellar L-ring protein [Candidatus Solibacter usitatus Ellin6076]
Length = 228
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 61 YSLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+W +D +A V D++TV + + AV T +R +S +S +
Sbjct: 49 GGIWTPGSRLADAARDLKASQVDDVITVLVVENASAVAKGTTKTARTSSTRNSVSALAGI 108
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
P +G +G+G+ +R ++ + A V+ +L NG +++ ++EV VN
Sbjct: 109 TKAAGP-WANLAGVNGDTQLAGEGATTRDVVISTTLTARVSGVLPNGAMLVEATKEVEVN 167
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTEL-LRPPIGHQLIENLSP 237
E + + V GIVRP DV + N+V D++ + + GKG + RP I ++++ L P
Sbjct: 168 SEHQVITVRGIVRPADVASDNTVRSDRLGQLEVRVNGKGVVGDAIRRPFILYRILLGLLP 227
>gi|91785402|ref|YP_560608.1| putative flagellar L-ring protein precursor(basal body L-ring
protein), FlgH [Burkholderia xenovorans LB400]
gi|91689356|gb|ABE32556.1| Putative flagellar L-ring protein precursor(Basal body L-ring
protein), FlgH [Burkholderia xenovorans LB400]
Length = 239
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 84/195 (43%), Gaps = 3/195 (1%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
P + ++++ L ++ RA ++GD+LT+ +
Sbjct: 45 DTPMAPPLASAPLNVNTQGAIYQAGAPLLLYETPRAQHIGDVLTIRLAESYSGNNSATAA 104
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAI 161
SR++S+ + + + ++ + G+GS++ ++ +A V
Sbjct: 105 ASRSSSITADAADHSTNAAARLARLFNIGSA--STDYKGQGSLTDISGMSGTLAVTVIGT 162
Query: 162 LENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
+ GNL++SG + + ++ L ++GIV P+D++A N V+ K+A ARI G G ++
Sbjct: 163 MSTGNLVVSGEKVIAMSGNRDRLRLSGIVNPKDIEAGNYVASSKVANARIEQAGVGMVSD 222
Query: 222 LLRPPIGHQLIENLS 236
++ ++
Sbjct: 223 ATTMGWLQRMFLSVL 237
>gi|295677873|ref|YP_003606397.1| flagellar L-ring protein [Burkholderia sp. CCGE1002]
gi|295437716|gb|ADG16886.1| flagellar L-ring protein [Burkholderia sp. CCGE1002]
Length = 223
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 90/235 (38%), Gaps = 19/235 (8%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R +F++ S + C S+ P + +
Sbjct: 5 RLTFVLGAASC-VAACSSTQ---------------TRSIVETPMAPPLASAPLNVNTQGA 48
Query: 63 LWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+++ L ++ RA ++GD+LT+ + +R +S+ + +
Sbjct: 49 IYQAGAPLLLYETPRAQHIGDVLTIRLSESYSGSNSASASANRASSITATAADQSTSAAA 108
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ ++ + G+G +S + +A V + GNL++SG + + ++
Sbjct: 109 RLAKLFNIGSA--STDYKGQGRLSDISDMTGTLAVTVIGTVSGGNLVVSGEKVIAMSGTR 166
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
L ++GIV P+D++A N V+ K+A ARI G G + ++ ++
Sbjct: 167 DRLRLSGIVNPKDIEAGNYVASSKVANARIEQAGLGMVNDATTMGWLQRMFLSVL 221
>gi|37360909|dbj|BAC98363.1| flagellar L-ring protein [Burkholderia glumae]
Length = 224
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 13/206 (6%)
Query: 38 LDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA---LFKDSRA---LNVGDILTVDIRID 91
+ + S + S++ +A L + A + D
Sbjct: 25 PRQPITQQPMTAVPPVPPSMQAPGSIYNPGYAGRPALRGSAAAQHRRHPDD------HDR 78
Query: 92 DQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
+ GR R + L +L G + P G + G S A
Sbjct: 79 GERQRHQVVGRERESRLRDRL-QGADRRLPRRPVRQGETERERRQQVHATGGASAANTFT 137
Query: 152 LLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARI 211
I VT +L NGNL++SG +++ +N + + +V P + NSV ++A+ARI
Sbjct: 138 GTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSVVVNPNTISGANSVYSTQVADARI 197
Query: 212 SYGGKGRTTELLRPPIGHQLIENLSP 237
Y KG E + N++P
Sbjct: 198 EYSSKGYINETETMGWLQRFFLNVAP 223
>gi|83646786|ref|YP_435221.1| flagellar basal body L-ring protein [Hahella chejuensis KCTC 2396]
gi|83634829|gb|ABC30796.1| Flagellar basal body L-ring protein [Hahella chejuensis KCTC 2396]
Length = 192
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 62 SLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ ++ L D +A VGD LTV I +A + + +++ FG
Sbjct: 24 SLFDEASFRPLTSDKKAYRVGDNLTVLIVEVSKAGASSDSKVNQSLEAS-------GSFG 76
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
Q G+L G S S R +L ++ V + G L+ISG Q++ VN E
Sbjct: 77 QTNRTEVGSLELGLGRNS--GASTQREGELRARVSVDVIDKDDVGRLLISGEQKITVNGE 134
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+++ +TG VR +D+ A N++ +I++A+I Y GKG + H + +
Sbjct: 135 KQTIKLTGWVREEDITAQNTILSTRISDAQIEYNGKGILGDSDDRGFIHWFLTKV 189
>gi|91204381|emb|CAJ70881.1| strongly similar to flagellar L-ring protein [Candidatus Kuenenia
stuttgartiensis]
Length = 211
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 62 SLWRDS---HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG-FS 117
SLW+ + L+ D+RA+ +GDI+TV I + ++ S + + FS
Sbjct: 31 SLWQKRITLNTNLYNDNRAMRIGDIVTVTINESTAITGKEDSSADQSTSHNINVDASDFS 90
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
N+ G G + L L I A+VT IL NGNLII G++EV +
Sbjct: 91 KKLGALQDYLPNVKSQTEHTFGGTGQYDSSRSLQLEITAVVTEILSNGNLIIEGNREVDI 150
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N E ++ V+GI+RP DV N + IA A IS GKG T + ++L E +SP
Sbjct: 151 NKEKYNIKVSGIIRPIDVSVDNVIQSSSIANASISLEGKGFLTNAAKRGWFYRLKEFVSP 210
>gi|187925553|ref|YP_001897195.1| flagellar L-ring protein [Burkholderia phytofirmans PsJN]
gi|187716747|gb|ACD17971.1| flagellar L-ring protein [Burkholderia phytofirmans PsJN]
Length = 223
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 3/195 (1%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
P + ++++ L ++ RA ++GD+LT+ +
Sbjct: 29 DTPMAPPLASAPLNVNTQGAIYQAGTPLLLYETPRAQHIGDVLTIRLSESYSGNNSATAA 88
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAI 161
SR++S+ + + + ++ + G+GS++ +N +A V
Sbjct: 89 ASRSSSITADAADHSTNAAARLARLFNIGSA--STEYKGQGSLTDVSGMNGTLAVTVIGT 146
Query: 162 LENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
+ GNL++SG + + ++ L ++GIV P+D++A N V+ K+A ARI G G ++
Sbjct: 147 MSTGNLVVSGEKVIAMSGNRDRLRLSGIVNPKDIEAGNYVASSKVANARIEQAGVGMVSD 206
Query: 222 LLRPPIGHQLIENLS 236
++ ++
Sbjct: 207 STTMGWLQRMFMSVL 221
>gi|323209684|gb|EFZ94613.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
Length = 194
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 1 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 50
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 110
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 111 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 170
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNS 200
+N + +G+V P+ + NS
Sbjct: 171 INQGTEFIRFSGVVNPRTISGSNS 194
>gi|87306345|ref|ZP_01088492.1| probable flagellar L-ring protein precursor FlgH [Blastopirellula
marina DSM 3645]
gi|87290524|gb|EAQ82411.1| probable flagellar L-ring protein precursor FlgH [Blastopirellula
marina DSM 3645]
Length = 231
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 85/239 (35%), Gaps = 19/239 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + ++ ++ + G + +
Sbjct: 1 MNRITILTSLVLTIAA------------TSLAAAQGPTSSLAQRSLPGNPSVPGEQVDGA 48
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG------ 114
+ L R + + DI+ + + + + R + + + L+
Sbjct: 49 IRDLSWYYREL-PPPRKIQIKDIIHIRVDEAAEMESEGNLNRRKQANFNALLANWVHLEN 107
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ Q + + +G++ E++ +AA V+ I+ NG L I +E
Sbjct: 108 LKAIVPDQQEDGSPQITGQLTSRYRTQGTLETLEEVRFRVAATVSEIMPNGTLKIEAQKE 167
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIE 233
++VN+E + + G+ R +D+D +N V +++A I+ G + + ++ +
Sbjct: 168 IQVNNETWTYYLRGVCRVEDIDPNNVVLSERLANLSITKQETGHIRDSYKRGWLLKIWD 226
>gi|168699691|ref|ZP_02731968.1| Flagellar L-ring protein [Gemmata obscuriglobus UQM 2246]
Length = 205
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 19/204 (9%)
Query: 53 NSDSTKKSYSLW---RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH 109
+ +T ++ SLW +A LF+D+RA VGD+L V I + + + +R +
Sbjct: 2 AAVATSRADSLWERRDPRYAYLFQDNRARAVGDVLVVTITENTVSNEQDARQLNRTATSG 61
Query: 110 RKL----------------SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
+ G + +G +
Sbjct: 62 GNVQFFGGGNVTPNNNGGGGGTGLGTVNSSGVGFTLPGGSTSLNFNGAAQSTVTHTFTDR 121
Query: 154 IAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+A V I+ NGNL++ G + V E R L +TGIVR QD+ N V +A R+SY
Sbjct: 122 MAVTVVDIMPNGNLVVEGYKSRVVQGEERVLRLTGIVRQQDIGVGNVVGSGNVANFRVSY 181
Query: 214 GGKGRTTELLRPPIGHQLIENLSP 237
G+G + R +L L P
Sbjct: 182 LGRGPGSRTTRQSYLGRLGNLLRP 205
>gi|322435950|ref|YP_004218162.1| flagellar L-ring protein [Acidobacterium sp. MP5ACTX9]
gi|321163677|gb|ADW69382.1| flagellar L-ring protein [Acidobacterium sp. MP5ACTX9]
Length = 285
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 90/212 (42%), Gaps = 6/212 (2%)
Query: 30 QMSPMGSSLDENNRMPFLGIDFKNSDSTKKS--YSLWRDSHA--ALFKDSRALNVGDILT 85
++ P+ + + K ST + S+W ++ L D RA+ D+++
Sbjct: 73 RLKPVEKPNVAQSSIATYLARVKADGSTGSASEGSIWSENGRLAHLSTDVRAMRPHDLIS 132
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
V + A D + SR ++ + ++S F L M LN + +G+ +
Sbjct: 133 VVVSESLAASTDGEVKNSRASNANSQISAFFGLL-HAGNAMQNLLNQSSTSGLAAQGASA 191
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDK 205
L+ V +L NG L+I +++V + + +++ + G+VRP+D+ N V
Sbjct: 192 TNSSLSTTFGGQVIDVLPNGMLVIEAARQVEFSQQTQTIVLRGLVRPEDISQQNQVLSTA 251
Query: 206 IAEARISYGGKGRTTELL-RPPIGHQLIENLS 236
I+ + GKG + R +L+E +
Sbjct: 252 ISSLELEVRGKGIVNDFTHRQNALVRLLEKVL 283
>gi|296159561|ref|ZP_06842385.1| flagellar L-ring protein [Burkholderia sp. Ch1-1]
gi|295890269|gb|EFG70063.1| flagellar L-ring protein [Burkholderia sp. Ch1-1]
Length = 222
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 84/195 (43%), Gaps = 3/195 (1%)
Query: 43 RMPFLGIDFKNSDSTKKSYSLWRDSHAAL-FKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
P + ++++ L ++ RA ++GD+LT+ +
Sbjct: 28 DTPMAPPLASAPLNVNTQGAIYQAGAPLLLYETPRAQHIGDVLTIRLAESYSGNNSATAA 87
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAI 161
SR++S+ + + + ++ + G+GS++ ++ +A V
Sbjct: 88 ASRSSSITADAADHSTNAAARLARLFNIGSA--STDYKGQGSLTDVSGMSGTLAVTVIGT 145
Query: 162 LENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
+ GNL++SG + + ++ L ++GIV P+D++A N V+ K+A ARI G G ++
Sbjct: 146 MSTGNLVVSGEKVIAMSGNRDRLRLSGIVNPKDIEAGNYVASGKVANARIEQAGVGMVSD 205
Query: 222 LLRPPIGHQLIENLS 236
++ ++
Sbjct: 206 ATTMGWLQRMFLSVL 220
>gi|325111111|ref|YP_004272179.1| flagellar L-ring protein [Planctomyces brasiliensis DSM 5305]
gi|324971379|gb|ADY62157.1| flagellar L-ring protein [Planctomyces brasiliensis DSM 5305]
Length = 293
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 74 DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF---SLFGQQTPQMNGNL 130
+ +A + DI++V + + +++ R RN SL +L L + + +
Sbjct: 126 EPKAFRINDIVSVIVSERSEVTLNSRFNRQRNASLKSELKEFVKLDGLTLVNDAETSPTI 185
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
+ + G ++ E + IAA V I NGNL++ +++ ND++ + G V
Sbjct: 186 DMNQQERIQSTGQVTDQEGITYRIAATVVDIRPNGNLVLEARKKINANDDLWEYTLHGEV 245
Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
R +DV +N+V + IA I GR G++LI+ P
Sbjct: 246 RYEDVLINNTVLSENIANLNIEKRMHGRVHSSTGRRWGNKLIDTFWP 292
>gi|225871946|ref|YP_002753400.1| flagellar L-ring protein FlgH [Acidobacterium capsulatum ATCC
51196]
gi|225792620|gb|ACO32710.1| flagellar L-ring protein FlgH [Acidobacterium capsulatum ATCC
51196]
Length = 246
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
VL + L G S P D R ++ +++ T+ ++
Sbjct: 18 ILLTVLAATPALAGKAKRRSPGDHSPP--------DIALRKYIAEVEAESAAETRTPGAI 69
Query: 64 WRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
W L+ D RA++V D ++V + A D SR++S + ++S F
Sbjct: 70 WSSDGRLTQLYSDVRAVHVHDPVSVVVSESLAASTDGTVKDSRSSSANSQVSSLFGAL-H 128
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+N +N G + +G + L + V A+L NG ++I +++ + +
Sbjct: 129 AGNALNNLVNQASGSTLNAQGESVTSSSLTTIFGGEVEAVLPNGMMVIQAVRQLTFSQQT 188
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELL-RPPIGHQLIENL 235
+ + + G++RP+D+++ N + I++ I GKG + R + +E L
Sbjct: 189 QLITLRGLIRPEDINSQNQILSTNISDLEIQVTGKGIVNDATHRQNPVVRFLERL 243
>gi|332296514|ref|YP_004438437.1| flagellar L-ring protein [Thermodesulfobium narugense DSM 14796]
gi|332179617|gb|AEE15306.1| flagellar L-ring protein [Thermodesulfobium narugense DSM 14796]
Length = 202
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
S+ L+ D +A +VGD + V + + + T + + S + +
Sbjct: 30 DPSYVNLYSDVKAHSVGDTVMVLLSENLNSSTSTSTKKQGSYSNSNSATQVPFVKNP--- 86
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ N++ G G S +GS R+ + I A + +L +G L I G + ++VN E +S+
Sbjct: 87 -LKTNMSASGSGQYSDQGSNGRSATITGDIEARIVEVLPSGLLRIEGQKNIQVNKEKQSI 145
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
++G++RP+D+ +N++ +I++A+I+ G T N+
Sbjct: 146 IISGLIRPEDISNNNTIYSYQISDAQITIKGTSPTGAKGILGAIGNFFGNV 196
>gi|320530441|ref|ZP_08031499.1| flagellar L-ring protein FlgH [Selenomonas artemidis F0399]
gi|320137274|gb|EFW29198.1| flagellar L-ring protein FlgH [Selenomonas artemidis F0399]
Length = 200
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRDSH----AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ SLW++ +F D RA+NVGDI+T+ I + ++ S+
Sbjct: 22 APAVSAESLWKNPSGYPTRNVFADHRAMNVGDIVTIIISETTTTSATRSSANEKSGSVSI 81
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + KGS S + + +T I GN I+
Sbjct: 82 GA-------GVGIFDFLKAASASGSDKFNAKGSASSTNRTIGNVTVTITEITPAGNFILE 134
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + G+ RP+D+ A N+V ++A+A + + GKG R I Q
Sbjct: 135 GTQSIWQNRNEHKITFRGMCRPEDISATNTVLSTRVADATVRFDGKGPLNAKQRQGILTQ 194
Query: 231 LIENLS 236
+ L
Sbjct: 195 IFNILF 200
>gi|313894978|ref|ZP_07828537.1| flagellar L-ring protein FlgH [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976431|gb|EFR41887.1| flagellar L-ring protein FlgH [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 199
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 55 DSTKKSYSLWRDSH----AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ SLW++ +F D RA+NVGDI+T+ I + ++ S+
Sbjct: 21 APAVSAESLWKNPSGYPTRNVFADHRAMNVGDIVTIIISETTTTSATRSSANEKSGSVSI 80
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
G + G + KGS S + + +T I GN I+
Sbjct: 81 GA-------GVGIFDFLKAASASGSDKFNAKGSASSTNRTIGNVTVTITEITPAGNFILE 133
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
G+Q + N + G+ RP+D+ A N+V ++A+A + + GKG R I Q
Sbjct: 134 GTQSIWQNRNEHKITFRGMCRPEDISATNTVLSTRVADATVRFDGKGPLNAKQRQGILTQ 193
Query: 231 LIENLS 236
+ L
Sbjct: 194 IFNILF 199
>gi|300314024|ref|YP_003778116.1| flagellar basal body L-ring protein [Herbaspirillum seropedicae
SmR1]
gi|300076809|gb|ADJ66208.1| flagellar basal body L-ring protein [Herbaspirillum seropedicae
SmR1]
Length = 221
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 11 YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAA 70
++LL C+S P +G + + + + +++R S A
Sbjct: 13 LAALLSACNS--------PAPMVIGPTSVRPAY---------QVANVENNGAIFRVSSAQ 55
Query: 71 LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM-NGN 129
LF++ A NVGDI+ +DI + T SR++SL +K G + G Q+ + N
Sbjct: 56 LFEEPTAYNVGDIIKIDISESISSSNKAATNNSRDSSLTQKGPGSGAPLGGLFTQLYDAN 115
Query: 130 LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGI 189
+ G G G S ++ + + +L N NL+++G + + VN I +L +G+
Sbjct: 116 YSASGNNTFKGSGDSSNTNTMSGTLMVSIVEVLPNRNLVVAGEKRIGVNGNINTLRFSGV 175
Query: 190 VRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
VR +D+ V+ +A+AR+ G G + + + +
Sbjct: 176 VRTRDIRGG-IVASSNVADARLEQVGGGSIADASTDGNFFRRLLTIW 221
>gi|268317783|ref|YP_003291502.1| flagellar L-ring protein [Rhodothermus marinus DSM 4252]
gi|262335317|gb|ACY49114.1| flagellar L-ring protein [Rhodothermus marinus DSM 4252]
Length = 193
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 7/165 (4%)
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ ++L+ D RA+ GD++T+ + A ++ + K+ G ++ G +
Sbjct: 19 AQSSLYADFRAVRPGDVITIILAERTAAQRESNFEHL----ANAKIGGAGAVSGTLGGKF 74
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDEIRSLN 185
+ + + + + L + A+V I GNL+I G +++ +N +
Sbjct: 75 SADATFSRES--KANNETLQRDLLEGTVTALVVGIDSTTGNLLIRGERKLNINGVTHLMR 132
Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQ 230
++G VRP DV N+V +IA A I Y G + RP +
Sbjct: 133 ISGTVRPYDVRYDNTVFSYQIANAHIEYRQSGLPRKFFRPGFLTR 177
>gi|229897907|ref|ZP_04513058.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
gi|229688948|gb|EEO81013.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
Length = 83
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V +L NGNL + G +++ +N + +G+V P+ + NSV+ ++A+ARI Y G
Sbjct: 2 TVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGN 61
Query: 217 GRTTELLRPPIGHQLIENLSP 237
G E + N+SP
Sbjct: 62 GYINEAQTMGWLQRFFLNVSP 82
>gi|149173755|ref|ZP_01852384.1| probable flagellar L-ring protein precursor FlgH [Planctomyces
maris DSM 8797]
gi|148847285|gb|EDL61619.1| probable flagellar L-ring protein precursor FlgH [Planctomyces
maris DSM 8797]
Length = 306
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
V DI+T+ + D++ R+R +L +L + +
Sbjct: 143 KVHDIITIMVDEKSSVTVDSRFNRNRTETLKAELKEFMRIDSAGNLAPAALNSPKIDTQL 202
Query: 139 SG----KGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
G G ++ E + IAAIV I NGNLI+ + +R N ++ +TG +R +D
Sbjct: 203 QGRLQSTGQLADREGIQYRIAAIVVDIRPNGNLILEARKSIRTNHDVWEYRLTGEIRSKD 262
Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
V+ N+ + IA I +G+ + + P G L + P
Sbjct: 263 VNRDNTALSENIANLDIVKHQRGKVYQSTKRPWGVVLYDWFFP 305
>gi|194428441|ref|ZP_03060981.1| flagellar L-ring protein FlgH [Escherichia coli B171]
gi|194413493|gb|EDX29775.1| flagellar L-ring protein FlgH [Escherichia coli B171]
Length = 83
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 157 IVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V +L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G
Sbjct: 2 TVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGN 61
Query: 217 GRTTELLRPPIGHQLIENLSPL 238
G E + NLSP+
Sbjct: 62 GYINEAQNMGWLQRFFLNLSPM 83
>gi|296122949|ref|YP_003630727.1| flagellar L-ring protein [Planctomyces limnophilus DSM 3776]
gi|296015289|gb|ADG68528.1| flagellar L-ring protein [Planctomyces limnophilus DSM 3776]
Length = 232
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 89/240 (37%), Gaps = 26/240 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
YR + + + L ++ G P ++P+ + E+ + ++ +
Sbjct: 14 YRLITVRVITTLGLTAGLQQLALCQGPPIITPLSDTRIEDYSLIYVEPPPLPPE------ 67
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ V DI+T+ + + + +++ R RN + +LS
Sbjct: 68 ----------------IKVHDIITIQVDEKAEVIVNSRFNRQRNGAYAAELSDFVRFGDN 111
Query: 122 QT----PQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
Q + + G ++ E ++ IAA V +L NG +++ + +R
Sbjct: 112 FNLLPAAQNSPAIEGTLNNRLQTIGQLTDQEGISYNIAATVVDVLPNGTVVLEARKSIRT 171
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
N + + G + + + + + IAE +I KG+ + G +++ +SP
Sbjct: 172 NQDFFEYRLAGRIDRLAILPNRTARSEDIAELKIERTQKGKVYNSTKTNWGTNILDIISP 231
>gi|315287429|gb|EFU46840.1| flagellar L-ring protein FlgH [Escherichia coli MS 110-3]
Length = 81
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V +L NGNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G
Sbjct: 1 VDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNG 60
Query: 218 RTTELLRPPIGHQLIENLSPL 238
E + NLSP+
Sbjct: 61 YINEAQNMGWLQRFFLNLSPM 81
>gi|157363241|ref|YP_001470008.1| flagellar L-ring protein [Thermotoga lettingae TMO]
gi|157313845|gb|ABV32944.1| flagellar L-ring protein [Thermotoga lettingae TMO]
Length = 199
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 62 SLWRDSHAALF----KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SLW +S +A F D +A VGDI+T+ ++ Q + N++ L F+
Sbjct: 22 SLWNNSSSAQFKNIIADRKASKVGDIVTIVVKETPQINSSSS-----NDAFENALVNLFT 76
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ Q + + S + S + + L I+A+V I +NGNL++ G+++++V
Sbjct: 77 GAVKNITQFDLSQFIPINNNSQQQRSAQLSSTVVLTISAVVVDI-QNGNLVVEGNKKLKV 135
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK-GRTTELLRPPIGHQLIENL 235
+++ + + G VRP D+ +N+V IA +I G+ + L+ +
Sbjct: 136 GEQLSEIIIRGTVRPDDISHNNTVDSSNIANCQIWVNGELVFRQNPDQQSWLDYLLSAI 194
>gi|91791417|ref|YP_561068.1| flagellar L-ring protein [Shewanella denitrificans OS217]
gi|91713419|gb|ABE53345.1| flagellar L-ring protein [Shewanella denitrificans OS217]
Length = 187
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
AL D RA+ +GD++T+ + D +A + G + +N
Sbjct: 27 RALTADKRAVGIGDVVTLLVFEDAKAGSSANLKEQGEFEMSA---------GARRSDLNW 77
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
G ++ G + R + + +V + + G ++ G Q++++N E + ++V+G
Sbjct: 78 QYGLGGMSSNKGDAATQRNGFIKAHVTVLVQGVDDYGLFVVQGIQKLQINGEEQVISVSG 137
Query: 189 IVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+R D+ A+N+ ++ +A IS+ G+G + + +L
Sbjct: 138 KLRKDDIAANNTALSSRLLDASISFTGQGTVSTGHDSNLFSRLFRWF 184
>gi|148270382|ref|YP_001244842.1| flagellar L-ring protein [Thermotoga petrophila RKU-1]
gi|170288992|ref|YP_001739230.1| flagellar L-ring protein [Thermotoga sp. RQ2]
gi|281412688|ref|YP_003346767.1| flagellar L-ring protein [Thermotoga naphthophila RKU-10]
gi|147735926|gb|ABQ47266.1| flagellar L-ring protein [Thermotoga petrophila RKU-1]
gi|170176495|gb|ACB09547.1| flagellar L-ring protein [Thermotoga sp. RQ2]
gi|281373791|gb|ADA67353.1| flagellar L-ring protein [Thermotoga naphthophila RKU-10]
Length = 199
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 60 SYSLWRDS----HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+S+W + + L +A VGDILT+ IR + + ++ + L+ +
Sbjct: 18 PFSIWNSAGESEYKNLLSIQKASKVGDILTIVIRESNNVSSERESLEIQKTLLNILGNVV 77
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ G N GK + I+A+V I GNL++ G + +
Sbjct: 78 NAAAGVNLNNFIPINNNSPERQRGGKVQS----SVVAKISAVVVDIDPYGNLVVEGRKTI 133
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+V+ + + + V G VRP D++ N V K+A++ I GK +E P + +
Sbjct: 134 KVDKDYQEIIVKGKVRPDDIEIGNEVDSSKLADSEIWVNGKLVFSE--EPG-KESFFDKI 190
Query: 236 S 236
Sbjct: 191 L 191
>gi|320107044|ref|YP_004182634.1| flagellar L-ring protein [Terriglobus saanensis SP1PR4]
gi|319925565|gb|ADV82640.1| flagellar L-ring protein [Terriglobus saanensis SP1PR4]
Length = 269
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 53 NSDSTKKSYSLWRDSHA--ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
++ ++W DS +F D RA+ D+++V + + D SRN+S +
Sbjct: 82 QANVPATPGAIWIDSGRLSRMFTDVRAMRPNDLISVVVSESLASSTDGTVKGSRNSSANS 141
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
++ FS + N +N A + +G + L+ ++ V +L NG L+I
Sbjct: 142 AITALFSKLSAASAAQNL-INQSSASALTAQGQSANNSSLSTILGGQVVDVLPNGTLVIE 200
Query: 171 GSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELL-RPPIGH 229
+++V + + +++ + G+VRP+D+ N V I+ + G+G T+ RP
Sbjct: 201 AARQVEFSQQTQTIVLRGLVRPEDISQQNQVLSTAISSMELQVRGRGIVTDYTHRPNALV 260
Query: 230 QLI 232
+L+
Sbjct: 261 RLL 263
>gi|15644288|ref|NP_229340.1| flagellar L-ring protein [Thermotoga maritima MSB8]
gi|14548051|sp|Q9X1M6|FLGH_THEMA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body
L-ring protein; Flags: Precursor
gi|4982107|gb|AAD36607.1|AE001800_17 flagellar L-ring protein [Thermotoga maritima MSB8]
Length = 199
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 60 SYSLWRDS----HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+S+W + + L +A VGDILT+ IR + + ++ + L+ +
Sbjct: 18 PFSIWNSAGESEYKNLLSIKKASKVGDILTIVIRESNNVSSERESLEIQKTLLNILGNVV 77
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ G N GK + I+A+V I GNL++ G + +
Sbjct: 78 NAAAGVNLNNFIPINNNSPERQRGGKVQS----SVVAKISAVVVDIDPYGNLVVEGRKTI 133
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+V+ + + + V G VRP D++ N V K+A++ I GK +E P + +
Sbjct: 134 KVDKDYQEIIVKGKVRPDDIEIGNEVDSSKLADSEIWVNGKLVFSE--EPG-KESFFDKI 190
Query: 236 S 236
Sbjct: 191 L 191
>gi|226225709|ref|YP_002759815.1| putative flagellar L-ring protein [Gemmatimonas aurantiaca T-27]
gi|226088900|dbj|BAH37345.1| putative flagellar L-ring protein [Gemmatimonas aurantiaca T-27]
Length = 235
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 68 HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMN 127
+ D RA VGDI+TV + T N S + G +
Sbjct: 72 RTSWTADRRAFAVGDIITVLVDDYTI-----TTAVKENVSSDTRTRGLSVNARMPESSKS 126
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
++ + +G R + ++ V A+ +NG L + GS+ + V+ + + T
Sbjct: 127 VGIDSRNAADQTQRGQARRENRFQNELSVRVVAVGQNGLLQVKGSKIIDVDKSKQDIVFT 186
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
G VR QD+ N V ++A+ +I Y G + + I +++ L P
Sbjct: 187 GWVRAQDISVANLVESSRVADLQIGYASPGPLGKP-KQGILTKVLGALWP 235
>gi|83815340|ref|YP_446739.1| flagellar L-ring protein FlgH [Salinibacter ruber DSM 13855]
gi|83756734|gb|ABC44847.1| flagellar L-ring protein FlgH [Salinibacter ruber DSM 13855]
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
R + +L+ D A GD++TV I ++ + ++SL+ SG F ++
Sbjct: 37 RAAEQSLYADPVAREPGDVITVVIDEQTSGQRESSYEGNSSSSLNGSGSGTF----SESI 92
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ + + + ++E LN A VTA+ GNL + G + + ++ +
Sbjct: 93 SGSFSAGTEVSSETENSNESVQSEVLNGTFTARVTAVNNAGNLEVKGERRLTIDGVTHIM 152
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V+G+VRP DV +N++ +IA A+I YG +G
Sbjct: 153 EVSGVVRPTDVRQNNTILSTQIANAKIKYGEEG 185
>gi|150020564|ref|YP_001305918.1| flagellar basal body L-ring protein-like protein [Thermosipho
melanesiensis BI429]
gi|149793085|gb|ABR30533.1| Flagellar basal body L-ring protein-like protein [Thermosipho
melanesiensis BI429]
Length = 194
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Query: 60 SYSLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
S S++ + + RA VGDI+ + + + ++ +N L SG
Sbjct: 17 SNSIYNPNSKFGNIIASKRASKVGDIVNILVYETPRFSTSSEMDSFKNTILGAINSGAKI 76
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
L + + + ++ + S + L I AIV + E GNL + G + ++V
Sbjct: 77 LGADLSGFLPVKDSDKLKNSNKSQTS------VILQITAIVKNVDEYGNLYVEGRKNIKV 130
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT-TELLRPPIGHQLIENL 235
+++R + +TG V P+ + N+V+ + EA+I GK + ++ +
Sbjct: 131 GNDLREIIITGWVNPEVISPKNTVNSTDLMEAQIWENGKVIFEDDPNEGSWLGLILSTI 189
>gi|217076993|ref|YP_002334709.1| flagellar L-ring protein FlgH [Thermosipho africanus TCF52B]
gi|217036846|gb|ACJ75368.1| flagellar L-ring protein FlgH [Thermosipho africanus TCF52B]
Length = 195
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 62 SLWRDSH--AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S++ + + + RA VGD++ + + + ++ +N L SG L
Sbjct: 20 SIYNPNSKFSNIIASPRASKVGDVVNILVYESPRFSTSSEVDSFKNTILGAISSGSKILG 79
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + + K S + L I A+V + E GNL + G + ++V +
Sbjct: 80 SDLSGFLP------IKDSDKVKSSNKSQTSVILQITAVVKKVDEYGNLYVEGRKNIKVGN 133
Query: 180 EIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRT-TELLRPPIGHQLIENL 235
++R + +TG V P+ + A N+V+ + +A+I GK + ++ +L
Sbjct: 134 DLREIIITGWVNPEMISAKNTVNSTDLMDAQIWENGKIIFEDDPNEGSWLGLILSSL 190
>gi|294508675|ref|YP_003572734.1| flagellar L-ring protein [Precursor] [Salinibacter ruber M8]
gi|294345004|emb|CBH25782.1| Flagellar L-ring protein [Precursor] [Salinibacter ruber M8]
Length = 215
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
R + +L+ D A GD++TV I ++ + ++SL+ SG F ++
Sbjct: 37 RAAEQSLYADPVAREPGDVITVVIDEQTSGQRESSYEGNSSSSLNGSGSGTF----SESI 92
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
+ + + + ++E LN A VTAI GNL + G + + ++ +
Sbjct: 93 SGSFSAGTEVSSETENSNESVQSEVLNGTFTARVTAINNAGNLEVKGERRLTIDGVTHIM 152
Query: 185 NVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
V+G+VRP DV +N++ +IA A+I YG +G
Sbjct: 153 EVSGVVRPTDVRQNNTILSTQIANAKIKYGEEG 185
>gi|315291057|gb|EFU50420.1| putative flagellar L-ring protein FlgH [Escherichia coli MS 153-1]
Length = 75
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 165 GNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLR 224
GNL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G E
Sbjct: 2 GNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN 61
Query: 225 PPIGHQLIENLSPL 238
+ NLSP+
Sbjct: 62 MGWLQRFFLNLSPM 75
>gi|213419606|ref|ZP_03352672.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 179
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 14/189 (7%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M +Y+ ++ + L GC ++ P+ P G + S
Sbjct: 1 MQKYALHAYPVMALMVATLTGCAWIPAK--------PLVQGA--TTAQPIPGPVPVANGS 50
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+S + LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 51 IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVP 110
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
++ GG + +GKG + + + + V +L NGNL + G +++
Sbjct: 111 RYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIA 170
Query: 177 VNDEIRSLN 185
+N +
Sbjct: 171 INQGTEFIR 179
>gi|300982576|ref|ZP_07176198.1| flagellar L-ring protein FlgH [Escherichia coli MS 200-1]
gi|300307157|gb|EFJ61677.1| flagellar L-ring protein FlgH [Escherichia coli MS 200-1]
Length = 89
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 166 NLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRP 225
NL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G E
Sbjct: 17 NLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNM 76
Query: 226 PIGHQLIENLSPL 238
+ NLSP+
Sbjct: 77 GWLQRFFLNLSPM 89
>gi|301051135|ref|ZP_07197966.1| flagellar L-ring protein FlgH [Escherichia coli MS 185-1]
gi|300297219|gb|EFJ53604.1| flagellar L-ring protein FlgH [Escherichia coli MS 185-1]
Length = 93
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 166 NLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRP 225
NL + G +++ +N + +G+V P+ + N+V ++A+ARI Y G G E
Sbjct: 21 NLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNM 80
Query: 226 PIGHQLIENLSPL 238
+ NLSP+
Sbjct: 81 GWLQRFFLNLSPM 93
>gi|160901815|ref|YP_001567396.1| flagellar basal body L-ring protein-like protein [Petrotoga mobilis
SJ95]
gi|160359459|gb|ABX31073.1| flagellar basal body L-ring protein-like protein [Petrotoga mobilis
SJ95]
Length = 211
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Query: 62 SLWRDS---HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SLW + +++ ++ VGD++T+ + + + S+ S ++
Sbjct: 27 SLWNKNDEEGNSIYNYNQDFGVGDVVTIVVSENPSLSLSENMPDYKKASVDTVNSVVTNI 86
Query: 119 FGQQTPQM--NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
G G + + + S S + ++ L ++A++ +NG L I G +E++
Sbjct: 87 GGVDLSNFLPIGAGDPAQVSVQNDQKSASSSAEVQLFVSAVIQEEDQNGLLKIRGEKEIK 146
Query: 177 VNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK-GRTTELLRPPIGHQLIENL 235
V + ++ V G V P+++ ++ +A A+I Y G + P ++ +
Sbjct: 147 VGNNRNTMIVEGYVSPKNIARDGTIYSSSLANAKIWYDGDIVFQQDPNEPSWLTSILSGI 206
>gi|207091665|ref|ZP_03239452.1| flagellar basal body L-ring protein [Helicobacter pylori
HPKX_438_AG0C1]
Length = 152
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 58/106 (54%)
Query: 132 YDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVR 191
G GS ++E L ++++A + +LENGN I G++EV V+ E + L V+G++R
Sbjct: 46 SSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEKQILKVSGVIR 105
Query: 192 PQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
P D++ +N++ +A+A+I Y G ++ + +E P
Sbjct: 106 PYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMP 151
>gi|154249529|ref|YP_001410354.1| flagellar L-ring protein [Fervidobacterium nodosum Rt17-B1]
gi|154153465|gb|ABS60697.1| flagellar L-ring protein [Fervidobacterium nodosum Rt17-B1]
Length = 203
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 11/179 (6%)
Query: 62 SLWRDSHAALFKD----SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
SL+ S F++ +A VGD +T+ + + +Q ++ +G
Sbjct: 26 SLYTSSANPQFQNLMGTYKASKVGDAITIVVYESPRISTSSQVNSITGAFINAINTGTKL 85
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
+ + + N + + K + + A+V + G + + G ++++V
Sbjct: 86 VGLDLSKYLPTN------SSPTDKRDNKSQANAVVELTAVVKQVDSTGKMFVEGKKQIKV 139
Query: 178 NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGR-TTELLRPPIGHQLIENL 235
+++R + +TG V PQ + N V+ + A+I GK + + L+ +
Sbjct: 140 GNDLREIIITGWVHPQAIKPGNIVNSTDLINAQIWENGKVVFQDDPQQSTWLGLLLSAI 198
>gi|170695743|ref|ZP_02886885.1| flagellar L-ring protein [Burkholderia graminis C4D1M]
gi|170139348|gb|EDT07534.1| flagellar L-ring protein [Burkholderia graminis C4D1M]
Length = 123
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 50/109 (45%)
Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
+ ++ S++ A + +A V + GNL++SG + + + L ++
Sbjct: 13 ASSSHRSASTEFKDSSLTDASAMTGTLAVTVIGTMPTGNLVVSGEKVISMGGNRDRLRLS 72
Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLS 236
G+V P+D++ N V+ K+A ARI G G ++ ++ ++
Sbjct: 73 GVVNPKDIETGNYVASSKVANARIEQAGSGMISDATTMGWLQRMFLSVL 121
>gi|148258431|ref|YP_001243016.1| putative flagellar L-ring protein FlgH [Bradyrhizobium sp. BTAi1]
gi|146410604|gb|ABQ39110.1| putative flagellar L-ring protein FlgH [Bradyrhizobium sp. BTAi1]
Length = 221
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 12/216 (5%)
Query: 3 RYSFIVLCYSSLL--FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD--STK 58
R +L + L+ GC T + P L E + P + +
Sbjct: 5 RIVRALLAANVLVISSGCA-QFDGPTSSAALLPAEP-LTEPDEAPIQPLLPAAAARVPAH 62
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ R A RA +GDI+T+ + I + + G + +N +L
Sbjct: 63 QPNRRLRSLSHAWSTKQRAPQIGDIVTMTVNIAENPGDMSTQGGTNSNRHADELP----- 117
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
+ ++G+ ++ +AE + +AA+VT + +G L++ G + ++++
Sbjct: 118 -DTGGAVAGRRADASSSRDTAGRTTVGQAELKRMSMAAVVTRVSPDGGLVVEGRRTMQID 176
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
EI L V+G+V + +S+ K+ + +ISY
Sbjct: 177 GEIVDLEVSGVVPADSLRVDHSIDASKMKQMQISYH 212
>gi|153847382|ref|ZP_01993931.1| flagellar L-ring protein 1 [Vibrio parahaemolyticus AQ3810]
gi|149744734|gb|EDM56202.1| flagellar L-ring protein 1 [Vibrio parahaemolyticus AQ3810]
Length = 179
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 14/155 (9%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRAL 78
+ G P +P+ + + SL+ H L+ DS+
Sbjct: 38 GRNDPVAGDPAWAPIHPKQKPEHYA-------------AATGSLFSPEHITDLYDDSKPR 84
Query: 79 NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGAS 138
+GDI+TV + A S+ N + + N + + +
Sbjct: 85 GIGDIITVTLDETTSATKSANADLSKTNEAQMDPLQVGGEELKVGGKYNFSYDLNNTNTF 144
Query: 139 SGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
+G S ++ ++ I V +L NGNL+I G +
Sbjct: 145 AGDSSAKQSNSISGYITVEVIEVLANGNLVIRGEK 179
>gi|85706165|ref|ZP_01037260.1| flagellar L-ring protein precursor [Roseovarius sp. 217]
gi|85669329|gb|EAQ24195.1| flagellar L-ring protein precursor [Roseovarius sp. 217]
Length = 64
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+RVN E+R L V+G VRP+D+ N ++YDKIA ARISYGG+G+ T++ +P IG Q+++
Sbjct: 1 MRVNFELRELLVSGFVRPEDISRQNEITYDKIAAARISYGGRGQITDVQQPRIGQQVLDA 60
Query: 235 LSP 237
+ P
Sbjct: 61 ILP 63
>gi|330861550|emb|CBX71754.1| hypothetical protein YEW_HA30670 [Yersinia enterocolitica W22703]
Length = 64
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN 234
+ +N + +G+V P+ + N+V+ ++A+ARI Y G G E + N
Sbjct: 1 IAINQGTEFIRFSGVVNPRTISGSNTVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLN 60
Query: 235 LSP 237
+SP
Sbjct: 61 VSP 63
>gi|222100097|ref|YP_002534665.1| Flagellar L-ring protein precursor [Thermotoga neapolitana DSM
4359]
gi|221572487|gb|ACM23299.1| Flagellar L-ring protein precursor [Thermotoga neapolitana DSM
4359]
Length = 200
Score = 99.0 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 60 SYSLWRDS----HAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+S+W S + L +A VGDI+T+ IR ++ + ++ + L +
Sbjct: 18 PFSMWNSSGESEYKNLLSIRKASKVGDIVTIVIRENNNLSSERESLEIQKTLLSILGNVV 77
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ N + G S +V + GNL++ G + +
Sbjct: 78 SAAANFNLNNFIPINNNPSPQTTRGGEMKSSVVAKVSA---VVVDVDPYGNLVVEGRKTI 134
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENL 235
+V+ + + + + G VRP D++ N V K+A++ I GK +E P + +
Sbjct: 135 KVDKDYQEIIIKGKVRPDDIEIGNEVDSTKLADSEIWVNGKLVFSE--EPG-KESFFDKV 191
Query: 236 S 236
Sbjct: 192 L 192
>gi|116327822|ref|YP_797542.1| endoflagellar basal body L-ring protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116331366|ref|YP_801084.1| endoflagellar basal body L-ring protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120566|gb|ABJ78609.1| Endoflagellar basal body L-ring protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116125055|gb|ABJ76326.1| Endoflagellar basal body L-ring protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 354
Score = 95.2 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLW D + +++ VG L V I+ QA F+ ++ +L
Sbjct: 154 NAQESSLWAD--KNPYSMRQSIKVGSPLYVKIKNGLQAEFELESNADETLTLKV------ 205
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEV 175
+ ++ + N D KG I K+ + +VTA+ N G L I G +
Sbjct: 206 -MPDKKIIPDMPSYNSDRTITRKNKGKIKSLGKIKGNLTVLVTAVDPNTGLLSIRGQKMN 264
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
+N E SL ++G V P+ V+ +S+ DKIA+ ++++ GK
Sbjct: 265 VINGEENSLFLSGTVSPEFVEKDSSIDADKIADLQVNFNGK 305
>gi|183220921|ref|YP_001838917.1| flagellar L-ring protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|167779343|gb|ABZ97641.1| Flagellar L-ring protein (Basal body L-ring protein) [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 263
Score = 94.8 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW+D + + + G ++ V ++ + ++++ + +N + ++ +
Sbjct: 67 SLWKD--KDPYSYPKTIQPGTVVKVVLKNGLRVEYESEYKATFDNDIK-------TVPDK 117
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ N + S G K+ ++A +VT + GNL + GS+ +++E
Sbjct: 118 KLVPDLPNYTANSTYMRSKVGKSKSQGKVVGVMAVLVTGVDPGTGNLELEGSRVFNLSEE 177
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
++ ++G + P+D+D + ++ D IA R+ Y G
Sbjct: 178 RVNIRLSGTISPEDLDKNRFIASDLIANLRVEYQGT 213
>gi|189911017|ref|YP_001962572.1| endoflagellar basal body L-ring protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167775693|gb|ABZ93994.1| Endoflagellar basal body L-ring protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
Length = 262
Score = 94.8 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW+D + + + G ++ V ++ + ++++ + +N + ++ +
Sbjct: 66 SLWKD--KDPYSYPKTIQPGTVVKVVLKNGLRVEYESEYKATFDNDIK-------TVPDK 116
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ N + S G K+ ++A +VT + GNL + GS+ +++E
Sbjct: 117 KLVPDLPNYTANSTYMRSKVGKSKSQGKVVGVMAVLVTGVDPGTGNLELEGSRVFNLSEE 176
Query: 181 IRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
++ ++G + P+D+D + ++ D IA R+ Y G
Sbjct: 177 RVNIRLSGTISPEDLDKNRFIASDLIANLRVEYQGT 212
>gi|45657206|ref|YP_001292.1| flagellar L-ring protein precursor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600444|gb|AAS69929.1| flagellar L-ring protein precursor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 333
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLW D + +++ VG L V IR QA F+ ++ +L
Sbjct: 133 NAQESSLWTD--KNPYSVRQSMKVGSTLYVKIRNGLQAEFELESNADETLTLKA------ 184
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEV 175
+ ++ + N D KG I K+ + +VTAI N G L + G +
Sbjct: 185 -MPDKKIIPDMPSYNNDRTITRKNKGKIKSIGKIKGNLTVLVTAIDPNTGLLNVQGQKVS 243
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
+N E SL ++G V P+ V+ S+ DKIA ++++ GK
Sbjct: 244 VINGEENSLLLSGTVSPEFVEKDLSIDSDKIANLQLNFNGK 284
>gi|24215365|ref|NP_712846.1| flagellar L-ring protein precursor [Leptospira interrogans serovar
Lai str. 56601]
gi|24196476|gb|AAN49864.1|AE011433_8 flagellar L-ring protein precursor [Leptospira interrogans serovar
Lai str. 56601]
Length = 333
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
+ SLW D + +++ VG L V IR QA F+ ++ +L
Sbjct: 133 NAQESSLWTD--KNPYSVRQSMKVGSTLYVKIRNGLQAEFELESNADETLTLKA------ 184
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEV 175
+ ++ + N D KG I K+ + +VTAI N G L + G +
Sbjct: 185 -MPDKKIIPDMPSYNNDRTITRKNKGKIKSIGKIKGNLTVLVTAIDPNTGLLNVQGQKVS 243
Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
+N E SL ++G V P+ V+ S+ DKIA ++++ GK
Sbjct: 244 VINGEENSLLLSGTVSPEFVEKDLSIDSDKIANLQLNFNGK 284
>gi|324013278|gb|EGB82497.1| hypothetical protein HMPREF9533_02671 [Escherichia coli MS 60-1]
Length = 56
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
+ +G+V P+ + N+V ++A+ARI Y G G E + NLSP+
Sbjct: 1 FIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 56
>gi|42522136|ref|NP_967516.1| flagellar L-ring protein [Bdellovibrio bacteriovorus HD100]
gi|39574667|emb|CAE78509.1| flagellar L-ring protein [Bdellovibrio bacteriovorus HD100]
Length = 250
Score = 91.3 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 29/238 (12%)
Query: 1 MYRYS--FIVLCYSSLLFGCHS---------------SISEITGIPQMS---PMGSSLDE 40
M + F VL GC + ++ +I P+ S MG D
Sbjct: 1 MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDR 60
Query: 41 NNRMPFLGIDFKNSDSTKKSYSLW--RDSHAALFKDSRALNVGDILTVDIR------IDD 92
+ + SD + S+W A LF ++ GD+L V + +D
Sbjct: 61 QYKRMTKNRMEEESDLGANAGSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDT 120
Query: 93 QAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
+ + + ++L+ G + + + +
Sbjct: 121 KVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEAAKKPEPAKVEEKDDGAADVA 180
Query: 153 LIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
I + + +GN I G Q + + VTG++RP+D + ++ DK+ + +
Sbjct: 181 NIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFN-DAGINSDKLLDPQ 237
>gi|167945180|ref|ZP_02532254.1| Flagellar L-ring protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 172
Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 37 SLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAV 95
+ + N P + + S + S+++ H + F+D RA VGD+LTV + A
Sbjct: 25 PVRDINYAPVRPVTPPPAPS--GNGSIYQGGHEVSWFEDMRARRVGDLLTVILSESTSAN 82
Query: 96 FDNQTGRSRNNSLHRKLSGGFS----------LFGQQTPQMNGNLNYDGGGASSGKGSIS 145
++G ++NS F + + G+GS S
Sbjct: 83 KSAKSGTKKSNSNTIANPTIFGSTPQFNTPGLIPLASNDNNTLAFSTSAANDFKGEGSAS 142
Query: 146 RAEKLNLLIAAIVTAILEN 164
++ + I V +L N
Sbjct: 143 QSNAITGNITVSVIEVLPN 161
>gi|297182934|gb|ADI19083.1| hypothetical protein [uncultured delta proteobacterium
HF0070_15B21]
Length = 265
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 70/214 (32%), Gaps = 20/214 (9%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQ-MSPMGSSLDENNRMPFLGIDFKNSDSTKKS-- 60
+V C + ++ Q + + +S N + +
Sbjct: 21 KILLVFFVLFAAAACRTPFNQPQTPAQNQTAVSNSKKVTNNRLSSEKRLRRKKVSVSRNL 80
Query: 61 --YSLWR--DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
SLWR S + +D RA GD+ T+ + N
Sbjct: 81 YEGSLWRYESSFGNILRDHRARFRGDLFTI----SELPSVVNVPEPKAEAEQEAAAPTNN 136
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ--E 174
+ + + + S+ ++A VT +L +GN++I G +
Sbjct: 137 TQRANLLLEAITMRDEIEREQNDILRSLE-------TMSARVTKVLPDGNMMIKGQKVDY 189
Query: 175 VRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAE 208
+ N +TGI+RP DVD N VS K+A
Sbjct: 190 RQRNQVRYITTITGILRPADVDDSNIVSATKLAN 223
>gi|254712017|ref|ZP_05173828.1| flagellar basal body L-ring protein [Brucella ceti M644/93/1]
gi|254715086|ref|ZP_05176897.1| flagellar basal body L-ring protein [Brucella ceti M13/05/1]
gi|261216796|ref|ZP_05931077.1| flagellar L-ring protein [Brucella ceti M13/05/1]
gi|261319663|ref|ZP_05958860.1| flagellar L-ring protein [Brucella ceti M644/93/1]
gi|260921885|gb|EEX88453.1| flagellar L-ring protein [Brucella ceti M13/05/1]
gi|261292353|gb|EEX95849.1| flagellar L-ring protein [Brucella ceti M644/93/1]
Length = 121
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + LL GC + EI P +SP+ + L N F G + ++
Sbjct: 5 MNK-AILAVAMVLLLAGCATKPEEIGRAPDLSPVAAHLGMQNNPQFNGYPARPGKASY-- 61
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
SLW FKD RA GD+LTV I I+D+A DN+T R R + G F
Sbjct: 62 -SLWDQRSTNFFKDPRAATPGDVLTVIISINDRANLDNKTDRERVSKGIYGGGGSF 116
>gi|300982618|ref|ZP_07176202.1| flagellar L-ring protein FlgH [Escherichia coli MS 200-1]
gi|300307083|gb|EFJ61603.1| flagellar L-ring protein FlgH [Escherichia coli MS 200-1]
Length = 171
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 57/168 (33%), Gaps = 10/168 (5%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQE 174
++ GG +GKG + + + + V NGN + G ++
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDPGTGNGNPHVGGGKK 171
>gi|315287366|gb|EFU46777.1| flagellar L-ring protein FlgH [Escherichia coli MS 110-3]
gi|324013353|gb|EGB82572.1| flagellar L-ring protein FlgH [Escherichia coli MS 60-1]
Length = 160
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 10/156 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
++ GG +GKG + + + + V +L
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVL 159
>gi|255609652|ref|XP_002539077.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
gi|223508849|gb|EEF23307.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
Length = 125
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Query: 31 MSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRI 90
MSP+GS L + + P + K + YSLW DS AALFKD+RALNVGDILTV I+I
Sbjct: 1 MSPIGSGL-QYAQTPQMSQYPKRPHQVAQGYSLWNDSQAALFKDARALNVGDILTVTIKI 59
Query: 91 DDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKL 150
DD+A +DN+T R+R N + +FG P N + ++ KG + R+E++
Sbjct: 60 DDKANWDNETNRNRTNKSDMNWNITAKIFG-WQPSTNADATSGSDTSTDAKGKMQRSEQI 118
Query: 151 NLLIAAI 157
NLL+AA+
Sbjct: 119 NLLVAAV 125
>gi|218670415|ref|ZP_03520086.1| flagellar basal body L-ring protein [Rhizobium etli GR56]
Length = 57
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
R +NV GIVRPQDV+A N +SYDKIAEARISYGG+GR E+ +PP G Q ++ SPL
Sbjct: 1 RIMNVAGIVRPQDVNADNQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 57
>gi|297183131|gb|ADI19274.1| hypothetical protein [uncultured delta proteobacterium
HF0200_39L23]
Length = 254
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 69/216 (31%), Gaps = 24/216 (11%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS--- 60
+VL C S ++ S + S
Sbjct: 10 KILLVLLVLFTSIACRSPFNQPQTPNANQNSVSKSKKATNTRLNSEKRLRRKRISVSRNL 69
Query: 61 --YSLWR--DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
SLWR S + +D RA GD+LT+ + ++ +
Sbjct: 70 YEGSLWRYESSFGNILRDHRARFRGDLLTI-------------SEVPAVVNVAEPKAEAE 116
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL--LIAAIVTAILENGNLIISGSQ- 173
T + + + + L I+A VT +L +GN++I G +
Sbjct: 117 GEAAAPTNDIQRASLLLEAMTMRDEIENEQNDILRSLETISARVTKVLPDGNMLIKGQKI 176
Query: 174 -EVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAE 208
+ N +TG++RP D+D N VS K+A
Sbjct: 177 DYRQRNQVRYITTITGVLRPADIDDSNIVSATKLAN 212
>gi|207109915|ref|ZP_03244077.1| flagellar basal body L-ring protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 145
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
SL+ LF D RA+ D++T+ + + + + +
Sbjct: 18 GSLFGQGERPLFADRRAMKPNDLITIVVSEKASTNYSSSKDYKSASGGNSTPPRLTYNGL 77
Query: 121 QQTPQMNGNL----------NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS 170
+ + G GS ++E L ++++A + +LENGN I
Sbjct: 78 DERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIY 137
Query: 171 GSQEVRVN 178
G++EV V+
Sbjct: 138 GNKEVLVD 145
>gi|116515145|ref|YP_802774.1| FlgH [Buchnera aphidicola str. Cc (Cinara cedri)]
gi|116256999|gb|ABJ90681.1| flagellar L-ring protein precursor [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 215
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
+ F + + +VGD + V + +F N+ + N + + + +
Sbjct: 56 QSWFNNYKNYSVGDTILVIFNE--KNIFKNKVIKYLNKKSNNTIYATPLIRENFFLKKK- 112
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTG 188
+ K I K+ I+ V IL+N L + G +++ +N+ I+++ G
Sbjct: 113 ----KKTNDFNIKKKIYINNKMIFKISTTVIKILKNKYLKVLGKKKIIINNSIQTIKFRG 168
Query: 189 IVRPQDVDAHNSVSYDKIAEARISY 213
I+ + ++ +NS+ K++ I Y
Sbjct: 169 IIDAKKINLNNSIHSSKVSNFIIQY 193
>gi|315291073|gb|EFU50436.1| flagellar L-ring protein FlgH [Escherichia coli MS 153-1]
Length = 154
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 10/151 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGVFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ GG +GKG + + + +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVT 154
>gi|301051137|ref|ZP_07197967.1| flagellar L-ring protein FlgH [Escherichia coli MS 185-1]
gi|300297158|gb|EFJ53543.1| flagellar L-ring protein FlgH [Escherichia coli MS 185-1]
Length = 155
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 10/151 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
I L GC S +P+ + P G + S +S
Sbjct: 14 ISSLLVLSLTGCAWIPS--------TPLVQGA--TSAQPVPGPTPVANGSIFQSAQPINY 63
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQM 126
+ LF+D R N+GD LT+ ++ + A + SR+ +
Sbjct: 64 GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGVFGNA 123
Query: 127 NGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ GG +GKG + + + +
Sbjct: 124 RADVEASGGNTFNGKGGANASNTFSGTLTVT 154
>gi|213417695|ref|ZP_03350819.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 42
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 198 HNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
NSV ++A+ARI Y G G E + NLSP+
Sbjct: 2 SNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 42
>gi|229897906|ref|ZP_04513057.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
gi|229688947|gb|EEO81012.1| Flagellar L-ring protein flgH [Yersinia pestis biovar Orientalis
str. India 195]
Length = 160
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 13/145 (8%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTK 58
MY R L LL GC P +D + P + S
Sbjct: 15 MYLRKISAPLMTMLLLNGCA-----------YIPHKPLVDGTTSAQPAPASAPLPNGSIF 63
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
++ + LF+D R N+GD LT+ ++ + A + SRN + ++
Sbjct: 64 QTVQPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRY 123
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGS 143
++ G GKG
Sbjct: 124 LDGLLGNGRADMEITGDNTFGGKGG 148
>gi|206603523|gb|EDZ40003.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 208
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 66/229 (28%), Gaps = 66/229 (28%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R S +L L GC P + + + +
Sbjct: 1 MRRNSPVGLLLVFIFLSGCA---------PAVKAHYPVVTDQAPRRLPPHPVQQ----YF 47
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SL+R D A L D A G+ + + I K +G
Sbjct: 48 DGSLYRPDGMADLASDQNAGFRGETVWIKI---------------------PKKNGLPGF 86
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
L+ A+V L++ + VR
Sbjct: 87 PQDH----------------------------ETLMGAVVVREAPPDELVVFAHRTVRRK 118
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK--GRTTELLRP 225
+E+R + G +R +D+ N++ K++ AR Y + G+ +P
Sbjct: 119 NEVRRWILEGRIRREDIGYDNTIPVRKLSMARYRYDHEQGGQKKRFQKP 167
>gi|124516717|gb|EAY58225.1| protein of unknown function [Leptospirillum rubarum]
Length = 208
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 65/228 (28%), Gaps = 66/228 (28%)
Query: 1 MYRYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R S +L L GC P + + + +
Sbjct: 1 MRRNSPVGLLLVFIFLSGCA---------PAVKAHYPVVSDQAPRRLPPHPVQQ----YF 47
Query: 60 SYSLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SL+R D A L D A G+ + + I K +G
Sbjct: 48 DGSLYRPDGMADLASDQNAEFRGETVWIKI---------------------PKKNGLPGF 86
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVN 178
L+ A+V L++ + VR
Sbjct: 87 PQDH----------------------------ETLMGAVVVREAPPDELVVFAHRTVRRK 118
Query: 179 DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK--GRTTELLR 224
+E+R + G +R +D+ N++ K++ AR Y + G+ +
Sbjct: 119 NEVRRWILEGRIRREDIGYDNTIPVRKLSMARYRYDHEQGGQKKRFQK 166
>gi|254715087|ref|ZP_05176898.1| flagellar basal body L-ring protein [Brucella ceti M13/05/1]
Length = 36
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 203 YDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
YDKIAEARISYGG+GR +E+ +PP G Q+++ SP
Sbjct: 1 YDKIAEARISYGGRGRLSEIQQPPYGQQILDQFSP 35
>gi|254712018|ref|ZP_05173829.1| flagellar basal body L-ring protein [Brucella ceti M644/93/1]
Length = 35
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 204 DKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237
DKIAEARISYGG+GR +E+ +PP G Q+++ SP
Sbjct: 1 DKIAEARISYGGRGRLSEIQQPPYGQQILDQFSP 34
>gi|207092886|ref|ZP_03240673.1| flagellar basal body L-ring protein [Helicobacter pylori
HPKX_438_AG0C1]
Length = 115
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 11/113 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+ F S+ +P + ++ K
Sbjct: 1 MKKALYLGAVAFSVAFSMASANEPKI---DFNPPNYVEETPSKEFI--------PELNKL 49
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
SL+ LF D RA+ D++T+ + A + + + +
Sbjct: 50 GSLFGQGERPLFADRRAMKPNDLITIVVSEKASANYSSSKDYKSASGGNSTPP 102
>gi|302339376|ref|YP_003804582.1| flagellar L-ring protein [Spirochaeta smaragdinae DSM 11293]
gi|301636561|gb|ADK81988.1| flagellar L-ring protein [Spirochaeta smaragdinae DSM 11293]
Length = 247
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 10/152 (6%)
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SLW+ +GD+++V + D ++ L F
Sbjct: 29 SLWKPGFPGYAAAGGGHGMGDLISVLLDADTVLSLNSVQTSDDTTQLS---------FSG 79
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ +S+ + +AA V ++G L+ISG +++ +N
Sbjct: 80 GDAGELTSFLPSADSSSNRSVEAKHDLSFSTSLAARVIGKDDSGALLISGRRQILINGTR 139
Query: 182 RSLNVTGIVRPQDVDAHNSVSYDKIAEARISY 213
+++ G V P V V ++ IA+A++ Y
Sbjct: 140 EEVSIEGSVAPDAVVEG-VVRFEDIADAKLVY 170
>gi|301168507|emb|CBW28097.1| hypothetical protein BMS_3354 [Bacteriovorax marinus SJ]
Length = 252
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 61/189 (32%), Gaps = 20/189 (10%)
Query: 25 ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS-----TKKSYSLWRD--SHAALFKDSRA 77
G P + P + + + + SLW S+ LF +
Sbjct: 68 AQGQPYYNRNNPPQVRRTYRPQQSVRKRYKADDLLDNSTNNSSLWAGKGSNRHLFTVLKE 127
Query: 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGA 137
GDI+ ++++ + + R ++ A
Sbjct: 128 KRNGDIVLINVQKTLKNDITLELKR--------AFPDIPKPADKEKKDEENKEEAVADNA 179
Query: 138 SSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ A K+ +++++ + +L++ G + V R + V ++ +D+
Sbjct: 180 NE-----QSANKIYDRVSSVIVEEVNEDHLLLRGQKSVLFKQRKRLVEVQALISRRDITD 234
Query: 198 HNSVSYDKI 206
++++ D I
Sbjct: 235 EDTINSDNI 243
>gi|297528686|ref|YP_003669961.1| hypothetical protein GC56T3_0323 [Geobacillus sp. C56-T3]
gi|297251938|gb|ADI25384.1| hypothetical protein GC56T3_0323 [Geobacillus sp. C56-T3]
Length = 339
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP------QMSPMGSSLDENNRMPFLGIDFKNS 54
M R+ F V C + LL GC + P Q P +E P G+ K +
Sbjct: 1 MKRWLFAVSCAALLLGGCTTKSEPKQAEPAKPAPRQEQPSKPPAEEKQTFPLTGLPAKGN 60
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDD 92
+ + + + L DI+ + D
Sbjct: 61 IHQRVVGVMINN--HPKARPQSGLRAADIVYEVLAEGD 96
>gi|317504252|ref|ZP_07962242.1| glucan 1,6-alpha-isomaltosidase [Prevotella salivae DSM 15606]
gi|315664622|gb|EFV04299.1| glucan 1,6-alpha-isomaltosidase [Prevotella salivae DSM 15606]
Length = 483
Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +Y L +++LL GC+S+ ++T + ++ G+D+
Sbjct: 1 MKKYILASLAFATLLSGCNSNEWDVTSDLSVDKTDPTIGLTPVAEKPGMDYAP------- 53
Query: 61 YSLWRDSHAALFKDSRALNVGDILT 85
L+ + L+ +A + +I T
Sbjct: 54 --LYWSLYGNLYDQEQARSFPNIFT 76
>gi|299142260|ref|ZP_07035393.1| glucan 1,6-alpha-isomaltosidase [Prevotella oris C735]
gi|298576349|gb|EFI48222.1| glucan 1,6-alpha-isomaltosidase [Prevotella oris C735]
Length = 483
Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +Y L +++LL GC+S+ ++T + ++ G+D+
Sbjct: 1 MKKYILASLAFATLLSGCNSNEWDVTSDLSVDKTDPTIGLTPVAEKPGMDYAP------- 53
Query: 61 YSLWRDSHAALFKDSRALNVGDILT 85
L+ + L+ +A + +I T
Sbjct: 54 --LYWSLYGNLYDQEQARSFPNIFT 76
>gi|251772410|gb|EES52977.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
Length = 205
Score = 45.1 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 62/208 (29%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F+ + + LL GC + ++ + ++ P + SL
Sbjct: 13 KVFLGILMALLLGGCMIQKAPVSH----------VSFSDSAPHPLPPLQR--EKFFDGSL 60
Query: 64 WRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ L D+ A +GD + V G
Sbjct: 61 YEPGTLGDLASDNVASRIGDPIVVRF------------------GPKNGYPGVP------ 96
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIR 182
+ +A V + +G L++S + +R +R
Sbjct: 97 -------------------------QSRTTRLAGEVIRVEPSGRLLVSAQRTIRDGSSLR 131
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEAR 210
+ + G V +++ N V +I+ R
Sbjct: 132 RIVLVGRVSRTSIESSNEVPVSEISMLR 159
>gi|320162261|ref|YP_004175486.1| putative ABC transporter substrate binding protein [Anaerolinea
thermophila UNI-1]
gi|319996115|dbj|BAJ64886.1| putative ABC transporter substrate binding protein [Anaerolinea
thermophila UNI-1]
Length = 459
Score = 45.1 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 43/155 (27%), Gaps = 19/155 (12%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP--QMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
++R +V+ LL C + + P + P +E + P
Sbjct: 5 LFRLFSLVMIAVLLLTACAPATTPTATEPPAEEQPTQPPAEEPTKPPAAEPTKAPEKKVV 64
Query: 59 KS----------YSLWRDSHAALFKD-SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
+ +LW+ F D A + + + + ++ A T ++ +
Sbjct: 65 ITWWHISTAEEHKALWQT-----FADEYMAAHPNVDIQITVLENE-AFKSKMTTVMQSGT 118
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKG 142
+ + + ++G
Sbjct: 119 PPDIFQSWGGGVMIEYAKAGLLRDITPELDANGGE 153
>gi|309700428|emb|CBI99719.1| probable outer membrane lipoprotein SilC precursor [Escherichia
coli ETEC H10407]
Length = 562
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 102 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 148
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 149 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 208
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 209 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 266
>gi|237728471|ref|ZP_04558952.1| copper/silver efflux system outer membrane protein CusC
[Citrobacter sp. 30_2]
gi|226909949|gb|EEH95867.1| copper/silver efflux system outer membrane protein CusC
[Citrobacter sp. 30_2]
Length = 562
Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 102 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 148
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 149 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 208
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
+GG T + + L GK R A IL
Sbjct: 209 GITYNGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 266
>gi|170693463|ref|ZP_02884622.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia graminis C4D1M]
gi|170141618|gb|EDT09787.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia graminis C4D1M]
Length = 509
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 45/172 (26%), Gaps = 16/172 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S I + + GC + ++ + P ++ +
Sbjct: 1 MQKHSLIAVAVALFAAGCTMAPKYERPAAPVTSNFPTGGVYETQPGATQPGQSGARSANG 60
Query: 61 YSLWRDSHAALFKDSRALNVGDI---------LTVDIRIDDQAVFDN-------QTGRSR 104
+ F D R + DI ++V QA F +
Sbjct: 61 VAAADIGWRDFFVDPRMQRLIDIALKNNRDLRVSVLNMQASQAQFRIVRAGLFPTLDAAA 120
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+ S R + + LN G+ + + L +A
Sbjct: 121 SQSKSRTPENLSVAGRTISNSYSVGLNASWEIDFFGRIQSLKDQALAQYLAT 172
>gi|265753515|ref|ZP_06088870.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_33FAA]
gi|263235229|gb|EEZ20753.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_33FAA]
Length = 701
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P G+ PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTGNPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGTLLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN GNL + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGNLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|237709863|ref|ZP_04540344.1| peptidyl-dipeptidase [Bacteroides sp. 9_1_42FAA]
gi|237725551|ref|ZP_04556032.1| peptidyl-dipeptidase [Bacteroides sp. D4]
gi|229436238|gb|EEO46315.1| peptidyl-dipeptidase [Bacteroides dorei 5_1_36/D4]
gi|229455956|gb|EEO61677.1| peptidyl-dipeptidase [Bacteroides sp. 9_1_42FAA]
Length = 701
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P G+ PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTGNPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGTLLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN GNL + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGNLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|212693052|ref|ZP_03301180.1| hypothetical protein BACDOR_02559 [Bacteroides dorei DSM 17855]
gi|212664419|gb|EEB24991.1| hypothetical protein BACDOR_02559 [Bacteroides dorei DSM 17855]
Length = 701
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P G+ PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTGNPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGTLLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN GNL + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGNLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|223983997|ref|ZP_03634155.1| hypothetical protein HOLDEFILI_01445 [Holdemania filiformis DSM
12042]
gi|223964073|gb|EEF68427.1| hypothetical protein HOLDEFILI_01445 [Holdemania filiformis DSM
12042]
Length = 210
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
R ++L + +L GC ++ E+ P ++P + P D +D +
Sbjct: 1 MRRKLVILLGALMLSGCAAA-PEVKPTPSLTPSPAIEQTPMPSPAATPDPTVNDKSA 56
>gi|319637956|ref|ZP_07992722.1| hypothetical protein HMPREF0604_00345 [Neisseria mucosa C102]
gi|317401111|gb|EFV81766.1| hypothetical protein HMPREF0604_00345 [Neisseria mucosa C102]
Length = 186
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ F+ L SLL C +++ T ++ +L + F+ S
Sbjct: 1 MKHLFLTLAVCSLLSACATTLEMQTDGFEIQQDTITLKQPPEGQARIYAFRPSRFAGGGV 60
Query: 62 SLWRDSHAALFKDSRAL-NVGDILTVDIRIDDQAVF 96
+ H F R N+ D + + F
Sbjct: 61 RYFVSGHYNKFTYQRPFANLDDTFFILRSENGAGNF 96
>gi|170021415|ref|YP_001726369.1| copper/silver efflux system outer membrane protein CusC
[Escherichia coli ATCC 8739]
gi|169756343|gb|ACA79042.1| RND efflux system, outer membrane lipoprotein, NodT family
[Escherichia coli ATCC 8739]
Length = 461
Score = 43.9 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 47
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 48 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 165
>gi|300916217|ref|ZP_07132967.1| putative outer membrane efflux protein OprM [Escherichia coli MS
115-1]
gi|300416453|gb|EFJ99763.1| putative outer membrane efflux protein OprM [Escherichia coli MS
115-1]
Length = 461
Score = 43.9 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 47
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 48 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 165
>gi|168998688|ref|YP_001687956.1| copper/silver efflux system outer membrane protein CusC [Klebsiella
pneumoniae NTUH-K2044]
gi|238549703|dbj|BAH66054.1| outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 461
Score = 43.9 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 47
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 48 NSYQDTGWRNFFVDPQVSRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 165
>gi|309792548|ref|ZP_07687010.1| hypothetical protein OSCT_2961 [Oscillochloris trichoides DG6]
gi|308225362|gb|EFO79128.1| hypothetical protein OSCT_2961 [Oscillochloris trichoides DG6]
Length = 412
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +SLL GC + + P P +++
Sbjct: 1 MRRIMLASCVAASLLVGCSQPQASL-------PTSQPTVVATVAPTSVATSSATEAPSDE 53
Query: 61 YSLWRDSHAALFKDSRALNVGDI 83
S+ A L +RA N D+
Sbjct: 54 SSIMAGIQATLDDYARAYNRNDL 76
>gi|295697872|ref|YP_003602529.1| Copper/silver efflux system outer membrane protein CusC
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|13633958|sp|Q9ZHD2|SILC_SALTY RecName: Full=Probable outer membrane lipoprotein silC; Flags:
Precursor
gi|4206627|gb|AAD11746.1| putative outer membrane protein SilC [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|295059984|gb|ADF64721.1| Copper/silver efflux system outer membrane protein CusC
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 461
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 47
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 48 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
+GG T + + L GK R A IL
Sbjct: 108 GITYNGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 165
>gi|38639717|ref|NP_943486.1| copper/silver efflux system outer membrane protein CusC [Klebsiella
pneumoniae]
gi|38016815|gb|AAR07836.1| SilC [Klebsiella pneumoniae]
Length = 513
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 53 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 99
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 100 NSYQDTGWRNFFVDPQVSRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 159
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 160 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 217
>gi|329999904|ref|ZP_08303568.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3]
gi|328538155|gb|EGF64313.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3]
Length = 461
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 47
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 48 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
+GG T + + L GK R A IL
Sbjct: 108 GITYNGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 165
>gi|152973507|ref|YP_001338558.1| copper/silver efflux system outer membrane protein CusC [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|150958299|gb|ABR80328.1| putative outer membrane protein SilC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 513
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P P SL +N+ P +
Sbjct: 53 MFKLKLLSISTIFILAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAV------------- 99
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
S F D + + D+ +++++ N T R N S
Sbjct: 100 NSYQDTGWRNFFVDPQVSRLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 159
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
+GG T + + L GK R A IL
Sbjct: 160 GITYNGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHIL 217
>gi|150005941|ref|YP_001300685.1| peptidyl-dipeptidase [Bacteroides vulgatus ATCC 8482]
gi|149934365|gb|ABR41063.1| peptidyl-dipeptidase [Bacteroides vulgatus ATCC 8482]
Length = 701
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P + PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTENPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGALLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN GNL + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGNLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|251789246|ref|YP_003003967.1| membrane lipoprotein lipid attachment site [Dickeya zeae Ech1591]
gi|247537867|gb|ACT06488.1| membrane lipoprotein lipid attachment site [Dickeya zeae Ech1591]
Length = 197
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +Y V+ + ++ GC S + + + P +P + +
Sbjct: 1 MKKY-LGVVLMALVMAGCSSQVQQTEQPAAIEPAVPPTPVKPSLPPSESQPLPTPPKIQV 59
Query: 61 YSL-WRDSHAALFK 73
L W + L
Sbjct: 60 PVLNWSAAVTPLVG 73
>gi|307730861|ref|YP_003908085.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. CCGE1003]
gi|307585396|gb|ADN58794.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. CCGE1003]
Length = 518
Score = 43.2 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 43/172 (25%), Gaps = 16/172 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S I + + GC + +S + P +
Sbjct: 10 MQKHSLIAVAVALFAAGCTMAPKYERPAAPVSSTFPTGGVYATQPGATQPGGAGARSANG 69
Query: 61 YSLWRDSHAALFKDSRALNVGDI---------LTVDIRIDDQAVFDN-------QTGRSR 104
+ F D R + +I ++V QA F +
Sbjct: 70 QAAADIGWRDFFVDPRMQRLIEIALKNNRDLRVSVLNMQASQAQFRIVRAGLLPTLDAAA 129
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+ S R + + LN G+ + + L +A
Sbjct: 130 SQSKSRTPKDLSVFGNTISNSYSVGLNASWEIDFFGRIQSLKDQALAQYLAT 181
>gi|255011488|ref|ZP_05283614.1| hypothetical protein Bfra3_20255 [Bacteroides fragilis 3_1_12]
gi|313149312|ref|ZP_07811505.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138079|gb|EFR55439.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 1084
Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 59/201 (29%), Gaps = 18/201 (8%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGI-----PQMSPMGSSLDENNRMPFLGIDF 51
M RY +L SL C P + N +
Sbjct: 1 MKRYKLKITYFILLLLSLFASCTDEEIFQGSGVTEGVPTTVDISVGTAANTAKTRSVLLE 60
Query: 52 KNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQ-----AVFDNQTGRSRNN 106
Y LW + + + SR + D++ + A G +N
Sbjct: 61 SEERKIYNLY-LWVFNSSGNVEYSREYSRADLIQAATDLTTSTGEVDADAPTSMGLLKNI 119
Query: 107 SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
SL F L L + +G S EK+ + T NGN
Sbjct: 120 SLTTGKKTLFLLGN--YKSDADGLFHVESEVLNGISKYSDLEKVRAAMTVH-TLFRPNGN 176
Query: 167 LIISGSQEVRVNDEIRSLNVT 187
L++S +Q V V+ + + V+
Sbjct: 177 LLMSLTQTVTVSTATKQIEVS 197
>gi|186475248|ref|YP_001856718.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum
STM815]
gi|184191707|gb|ACC69672.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia phymatum STM815]
Length = 505
Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 20/172 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++YS + + + GC + +S S P G ++++
Sbjct: 1 MHKYSLMAVAVALFATGCTMEPTYHQPAAPVSGTFPSDGVYATQPVPGAGARSANGQPAV 60
Query: 61 YSLWRDSHAALFKDSRALNVGDI---------LTVDIRIDDQAVFDN-------QTGRSR 104
WRD F D R + +I ++V +A + S
Sbjct: 61 EIGWRD----FFVDQRLQRLIEIALKNNRDLRVSVLNIEASRAQYQIARAALFPALDASA 116
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+ + R + + + LN G+ + + L +A
Sbjct: 117 SQTKQRTPKNLSVFGNTISNEYSVGLNASWEIDFFGRIRSLKDQALAQYLAT 168
>gi|289670511|ref|ZP_06491586.1| flagellar basal body L-ring protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 74
Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 16/78 (20%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ + S+LL GC ++ ++ +++P+ + + + +++
Sbjct: 12 LAIACSTLLGGCVAAG-DVRPFAELAPIVPVV--------------APVAQPTAGAIYAA 56
Query: 67 SHA-ALFKDSRALNVGDI 83
L+ D RA VGD+
Sbjct: 57 GPGLNLYGDRRARAVGDL 74
>gi|156932572|ref|YP_001436488.1| hypothetical protein ESA_00354 [Cronobacter sakazakii ATCC
BAA-894]
gi|156530826|gb|ABU75652.1| hypothetical protein ESA_00354 [Cronobacter sakazakii ATCC
BAA-894]
Length = 140
Score = 42.4 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + C LL GC S + P + P S +++ +
Sbjct: 1 MNKSLLFMTC--VLLAGCASQPPKSQVTPLTPAPAPVAAQTPPAPQQPESQPFSAASEST 58
Query: 61 YSL 63
S+
Sbjct: 59 NSM 61
>gi|159900793|ref|YP_001547040.1| hypothetical protein Haur_4280 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893832|gb|ABX06912.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
23779]
Length = 251
Score = 42.0 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 46/177 (25%), Gaps = 22/177 (12%)
Query: 1 MYRYSFIVLCYSSLL----FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M R LC LL C + S G P +P + +
Sbjct: 1 MRRNIMGSLCGLLLLTTAISACGAYTSAQQGSLGELPTAPPAPTYAPLPTEVVQGAPAIE 60
Query: 57 TKK-SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ L+R D V D+ N T +S+ ++
Sbjct: 61 NPNKAPELFRS---TFDGDLSQWEVIDVWM------------NSTEKSKWAIKEGRVEQV 105
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGS 172
G P + G ++ + +V + ENG +++
Sbjct: 106 TGPEG--WPAVAPTALVTGDKNWKDYSITAQGYSWGNSVMGLVGRVNENGFYVVAVR 160
>gi|188591872|ref|YP_001796470.1| exopolysaccharide export outer membrane protein, precursor
[Cupriavidus taiwanensis LMG 19424]
gi|170938246|emb|CAP63231.1| putative exopolysaccharide export outer membrane protein, putative
precursor [Cupriavidus taiwanensis LMG 19424]
Length = 397
Score = 42.0 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 13/187 (6%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
VL + LL GC +S + + P + + K D
Sbjct: 34 AVLGAALLLGGCAASPGMHFSPTANVDAVGPDAKPDITPITMELVRELRAKSKPT---ND 90
Query: 67 SHAALFKDSRAL--NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTP 124
LF + GDI++V + + VF QT + ++
Sbjct: 91 RVEELFATPKPYVIGPGDIISVVVWDHPELVFPTQT---YSIGAGFEVPASTGGSNMPGY 147
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL 184
++ N + A K + A ++ +A +++ ++ N + + + + +
Sbjct: 148 VVSPNGDIQFPYAGVMKVAGKTANQVRDEMARVLSRVVRNPQMTVR-----VLGFRSQRV 202
Query: 185 NVTGIVR 191
V G VR
Sbjct: 203 YVDGEVR 209
>gi|260591784|ref|ZP_05857242.1| putative lipoprotein [Prevotella veroralis F0319]
gi|260536068|gb|EEX18685.1| putative lipoprotein [Prevotella veroralis F0319]
Length = 335
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 7/156 (4%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ I+ + LL C S+ E PQ SP + + T S
Sbjct: 1 MKKILILASVALLLASCGSNEYEEWTKPQYSP-EETASSVKFTVAEAPAIDFNTVTADSV 59
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
L+ S + D+ A LT + +++ N + + S +S +L+G+
Sbjct: 60 LLFTPSVVS--TDAVAAQ---TLTAVLSNNNKTATLNVSNAGKVKSSEL-VSAIETLYGK 113
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
Q + + ++ + + I
Sbjct: 114 NGDQHEVAIAVTNKIKLQRGEGYNLSQNVKAKVTCI 149
>gi|41407046|ref|NP_959882.1| hypothetical protein MAP0948 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395397|gb|AAS03265.1| hypothetical protein MAP_0948 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 569
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG-------IDFKNS 54
R V+C +++L GC +SP + P G F
Sbjct: 21 KRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG 80
Query: 55 DSTKKSYSLWRDSH-AALFKDSRALNVGDILTV 86
+S ++ YS W S+ A+L R L D T+
Sbjct: 81 NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTL 113
>gi|118462313|ref|YP_880383.1| hypothetical protein MAV_1131 [Mycobacterium avium 104]
gi|118163600|gb|ABK64497.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 562
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG-------IDFKNS 54
R V+C +++L GC +SP + P G F
Sbjct: 14 KRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG 73
Query: 55 DSTKKSYSLWRDSH-AALFKDSRALNVGDILTV 86
+S ++ YS W S+ A+L R L D T+
Sbjct: 74 NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTL 106
>gi|311280551|ref|YP_003942782.1| RND efflux system, outer membrane lipoprotein, NodT family
[Enterobacter cloacae SCF1]
gi|308749746|gb|ADO49498.1| RND efflux system, outer membrane lipoprotein, NodT family
[Enterobacter cloacae SCF1]
Length = 461
Score = 41.6 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 46/170 (27%), Gaps = 13/170 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+R + + + L GC S + P SL N +P T
Sbjct: 1 MFRLKQLAVSTAFFLAGCVSLAPDYQRPELPVPQQFSLSRNALVPTTAGYQDTGWRTF-- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR----NNSLHRKLSGGF 116
+ D A F D N D+ +++ + N T R N S GG
Sbjct: 59 ---FADPQARRFIDEALRNNRDLRMASLKVQEARAQYNVTDADRYPQLNASSDASYKGGL 115
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
+ + L G+ + A IL
Sbjct: 116 KGDSATSKEYEAGLGLTFDLDFFGRLKNMSEADQQNFFASQQAQRAVHIL 165
>gi|225016878|ref|ZP_03706070.1| hypothetical protein CLOSTMETH_00790 [Clostridium methylpentosum
DSM 5476]
gi|224950367|gb|EEG31576.1| hypothetical protein CLOSTMETH_00790 [Clostridium methylpentosum
DSM 5476]
Length = 313
Score = 41.6 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ + +L GC S +M P+ S E + ++ +
Sbjct: 1 MRKGIYALMLLTLILSGCAEKNSSSVSS-EMQPVPSVAAEESE---SLPAAESGRVQRNE 56
Query: 61 YSLWRDSHAALFKDSRALNVGDILTV 86
+ + L+ + ++ V
Sbjct: 57 AAAYSYETRELYARRDENQIYGVIYV 82
>gi|146307804|ref|YP_001188269.1| hypothetical protein Pmen_2782 [Pseudomonas mendocina ymp]
gi|145576005|gb|ABP85537.1| hypothetical protein Pmen_2782 [Pseudomonas mendocina ymp]
Length = 121
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 15/90 (16%), Gaps = 9/90 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + + L GC P
Sbjct: 1 MRRLALLC-AIALGLSGCVLQQPSPPVGKLPPARQPGTPAGKLPPVQQPSHPRYAPPPGV 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGD 82
S W L+ R D
Sbjct: 60 KSHWNPALGVYVVEGARDLYYRERIFYRWD 89
>gi|163857572|ref|YP_001631870.1| outer membrane efflux protein [Bordetella petrii DSM 12804]
gi|163261300|emb|CAP43602.1| probable outer membrane efflux protein [Bordetella petrii]
Length = 500
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 55/201 (27%), Gaps = 18/201 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS---EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
MY+ + + C +++L GC + + +P P + + +++ +
Sbjct: 5 MYKRTALSACVAAVLAGCSLAPDYHRPESPVPGDWPAQPKVQYGGYDQPTSLSEQSAQAV 64
Query: 58 KKSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++ F+D R L I + D + R +
Sbjct: 65 APQGAVPAADIGWRDFFRDPR-------LQALIELSLVNNRDLRMAVQRVEEARAQYGVQ 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG---NLIISGS 172
S GS + I I G NL +
Sbjct: 118 RGAQWPSIGAGIEGTRQRVPANMSPTGSDTVGNTFQAGIGLTSFEIDLFGRLRNLSEAAY 177
Query: 173 QEVRVNDEIR---SLNVTGIV 190
Q+ ++ + + + G V
Sbjct: 178 QQYLATEQAQRSVHITLVGAV 198
>gi|146307719|ref|YP_001188184.1| hypothetical protein Pmen_2697 [Pseudomonas mendocina ymp]
gi|145575920|gb|ABP85452.1| hypothetical protein Pmen_2697 [Pseudomonas mendocina ymp]
Length = 171
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP---MGSSLDENNRMPFLGIDFKNSDST 57
M R + + L +LL GC + P+ + + + D + D +
Sbjct: 1 MMRRTCLTLVCLALLSGCEPAPEPAAEKPESAAPAVVSPAPDAPADVTVSEPDEAPAPVI 60
Query: 58 KK 59
Sbjct: 61 AP 62
>gi|308050003|ref|YP_003913569.1| prolyl oligopeptidase [Ferrimonas balearica DSM 9799]
gi|307632193|gb|ADN76495.1| prolyl oligopeptidase [Ferrimonas balearica DSM 9799]
Length = 710
Score = 41.2 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ + L ++LL GC S+ + SP G +++ + D +
Sbjct: 4 KTKWSTLAVAALLAGCQSAQPDAPAGAPDSPRGPVVEQLHGQAVADPYRYLEDPQQAQTQ 63
Query: 63 LWRDSHAALFKD--SRALNVGDILTVDIRI 90
W ++ A + D A+ D++ I
Sbjct: 64 AWVEAQRA-YGDGILAAIPNRDVIENRISE 92
>gi|213162655|ref|ZP_03348365.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 39
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
G +GKG + + + + V +L NGNL + G +
Sbjct: 1 GNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEK 39
>gi|163847175|ref|YP_001635219.1| hypothetical protein Caur_1612 [Chloroflexus aurantiacus J-10-fl]
gi|222525014|ref|YP_002569485.1| hypothetical protein Chy400_1749 [Chloroflexus sp. Y-400-fl]
gi|163668464|gb|ABY34830.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
gi|222448893|gb|ACM53159.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 685
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ--MSPMGSSLDENNRMPFLGIDF 51
M R S IV+ LL C S P ++P+ S + P I
Sbjct: 1 MKRTSLIVVIALVLLSSCLSPTETPPSTPATVITPVTESTAVPPQQPTTVITP 53
>gi|261418599|ref|YP_003252281.1| hypothetical protein GYMC61_1143 [Geobacillus sp. Y412MC61]
gi|319765414|ref|YP_004130915.1| hypothetical protein GYMC52_0265 [Geobacillus sp. Y412MC52]
gi|261375056|gb|ACX77799.1| conserved hypothetical protein [Geobacillus sp. Y412MC61]
gi|317110280|gb|ADU92772.1| hypothetical protein GYMC52_0265 [Geobacillus sp. Y412MC52]
Length = 336
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP---QMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + F V C LL GC + P Q P +E P G+ K +
Sbjct: 1 MKHWLFAVSCAVLLLGGCTTKSEPKHAEPAPRQEQPSKPRAEEQQTFPLTGLPAKGNIHQ 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDD 92
+ + + + L+ DI+ + D
Sbjct: 61 RVVGVMINN--HPKARPQSGLSKADIVYEVLAEGD 93
>gi|295815575|gb|ADG36297.1| SilC [Morganella sp. RP-42]
Length = 259
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 48/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSRNSLTPAVNGYQD-------- 52
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 53 -----TGWRNFFVDPQVTRLITEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L + GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDAGLEFSYELDFFGKLKNMSDADRQNYFASEEARRAVRIL 165
>gi|302564275|ref|NP_001181543.1| solute carrier family 25 member 45 [Macaca mulatta]
Length = 288
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 8/157 (5%)
Query: 13 SLLFGCHSSISEITGIPQMSPMG---SSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSH 68
L GC + + + + E P + + S++R + +
Sbjct: 102 IFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPVAQPGSPP-PQYQGPVHCAASIFREEGY 160
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+ + AL + D T+ I +Q N + G +
Sbjct: 161 RGLFRGAWALMLRDTPTMGIYFITYEGLCHQYTPEGQNPSSATVLVAGGFAGIASWVAAT 220
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
L+ + R ++ +V+++ + G
Sbjct: 221 PLDVIKSRM---QMDGLRRRVYQGVLDCMVSSVRQEG 254
>gi|121725841|ref|ZP_01679141.1| OmpA family protein [Vibrio cholerae V52]
gi|147672308|ref|YP_001215442.1| OmpA family protein [Vibrio cholerae O395]
gi|121631606|gb|EAX63974.1| OmpA family protein [Vibrio cholerae V52]
gi|146314691|gb|ABQ19231.1| OmpA family protein [Vibrio cholerae O395]
gi|227015278|gb|ACP11487.1| protein F-related protein [Vibrio cholerae O395]
Length = 207
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 6/156 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ F VLC + LL GC S +++ + + D + R P G + + S +
Sbjct: 1 MFEMKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSN 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLF 119
+A ++D R + + + ++ D + N T R S ++ L
Sbjct: 61 A--MTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLD 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 TVAR---FLATESGIDIVLEGHTDNTGSEKLNDKLA 151
>gi|212712815|ref|ZP_03320943.1| hypothetical protein PROVALCAL_03912 [Providencia alcalifaciens DSM
30120]
gi|212684507|gb|EEB44035.1| hypothetical protein PROVALCAL_03912 [Providencia alcalifaciens DSM
30120]
Length = 197
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 7/103 (6%)
Query: 2 YRYSFIVLCYSSLLFGCHS-----SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
+ +V + +L GC S + P ++P + + P
Sbjct: 1 MKRILLVAAAAFILAGCPSVPQGPKPPIVPVQPDVTPGTQPEKQPDLTPPPTDTVPMPPK 60
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ + W + L A + + V + +
Sbjct: 61 QQTTD--WASALQPLVNKMVADDGVESGKVLLVDSVKNNTSGS 101
>gi|296157260|ref|ZP_06840096.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. Ch1-1]
gi|295892596|gb|EFG72378.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. Ch1-1]
Length = 515
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 15/153 (9%), Positives = 38/153 (24%), Gaps = 16/153 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSS-----LDENNRMPFLGIDFKNSD 55
M ++S I + + GC + ++ + P
Sbjct: 1 MQKHSLIAVAVALFAAGCTMAPKYERPAAPVTATFPTGGVYDTQPGATQPGQQQPGTTGA 60
Query: 56 STKKSYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ + D F D R + +I A+ +N+ R ++ +
Sbjct: 61 ARTANGQAAADIGWRDFFVDPRMQRLIEI----------ALKNNRDLRVSVLNMQASAAQ 110
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRA 147
+ P ++ + +
Sbjct: 111 FRIVRAGLLPTLDAAASQSKSRTPKDLSFFDQT 143
>gi|238791848|ref|ZP_04635485.1| hypothetical protein yinte0001_15660 [Yersinia intermedia ATCC
29909]
gi|238728952|gb|EEQ20469.1| hypothetical protein yinte0001_15660 [Yersinia intermedia ATCC
29909]
Length = 192
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS--PMGSSLDENNRMPFLGIDFKNSDST 57
M RY F+VL + +L GC S P ++ P+ + E S
Sbjct: 1 MKRYLFVVL-AALVLTGCPSRTPVAPTTPPVTIEPVTPPVIETPPPVDTVPQPPKVQSI 58
>gi|254445860|ref|ZP_05059336.1| hypothetical protein VDG1235_4107 [Verrucomicrobiae bacterium
DG1235]
gi|198260168|gb|EDY84476.1| hypothetical protein VDG1235_4107 [Verrucomicrobiae bacterium
DG1235]
Length = 168
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + I S +L GC + G P P S R + +
Sbjct: 1 MRTLALIGAIASLILSGCATYQ---LGEPTELPYQSVSIAPPRNFSTLPQIEGPLNAALR 57
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRN 105
+SL R +L S A + +I ++ R + AV GR R
Sbjct: 58 HSLQRSGALSLASGSSADAILEITVLEARREIAAVSPQDVGRGRK 102
>gi|254881879|ref|ZP_05254589.1| peptidyl-dipeptidase [Bacteroides sp. 4_3_47FAA]
gi|319641118|ref|ZP_07995821.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_40A]
gi|254834672|gb|EET14981.1| peptidyl-dipeptidase [Bacteroides sp. 4_3_47FAA]
gi|317387249|gb|EFV68125.1| peptidyl-dipeptidase [Bacteroides sp. 3_1_40A]
Length = 701
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P G+ PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTGNPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGALLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN G+L + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGDLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|15601417|ref|NP_233048.1| protein F-related protein [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153211953|ref|ZP_01947800.1| OmpA family protein [Vibrio cholerae 1587]
gi|153800869|ref|ZP_01955455.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|153818096|ref|ZP_01970763.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|153824386|ref|ZP_01977053.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|227812226|ref|YP_002812236.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254285685|ref|ZP_04960648.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|254849820|ref|ZP_05239170.1| OmpA family protein [Vibrio cholerae MO10]
gi|298499464|ref|ZP_07009270.1| OmpA family protein [Vibrio cholerae MAK 757]
gi|9658075|gb|AAF96560.1| protein F-related protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|124117029|gb|EAY35849.1| OmpA family protein [Vibrio cholerae 1587]
gi|124123579|gb|EAY42322.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|126511364|gb|EAZ73958.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|149741940|gb|EDM55969.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|150424182|gb|EDN16120.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|227011368|gb|ACP07579.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254845525|gb|EET23939.1| OmpA family protein [Vibrio cholerae MO10]
gi|297541445|gb|EFH77496.1| OmpA family protein [Vibrio cholerae MAK 757]
Length = 207
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 6/156 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ F VLC + LL GC S +++ + + D + R P G +++
Sbjct: 1 MFEMKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMP 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLF 119
++ + A+ ++D R + + + ++ D + N T R S ++ L
Sbjct: 60 NAMTQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLD 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 TVAR---FLATESGIDIVLEGHTDNTGSEKLNDKLA 151
>gi|223986767|ref|ZP_03636752.1| hypothetical protein HOLDEFILI_04075 [Holdemania filiformis DSM
12042]
gi|223961288|gb|EEF65815.1| hypothetical protein HOLDEFILI_04075 [Holdemania filiformis DSM
12042]
Length = 190
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 9/89 (10%)
Query: 1 MYRYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + + +L GC + + P +P + P + +
Sbjct: 10 MKKLIIACVAVGCLMLTGCSKKNPQPSPTPSATP--------SAEPTMTPSASPETAEGL 61
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDI 88
L ++ +++V D + VD+
Sbjct: 62 KGILEAIRRNDEYQLPMSMDVDDTVLVDM 90
>gi|304311466|ref|YP_003811064.1| hypothetical protein HDN1F_18360 [gamma proteobacterium HdN1]
gi|301797199|emb|CBL45419.1| Hypothetical protein HDN1F_18360 [gamma proteobacterium HdN1]
Length = 280
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 21/62 (33%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + L S L C + + P S ++ + P + ++
Sbjct: 85 MFKNACLALGMSLGLSACATYAPIESRTPAESAPRVTVPATQQRPVAPMPSTKPSGYGQA 144
Query: 61 YS 62
S
Sbjct: 145 PS 146
>gi|212218446|ref|YP_002305233.1| rare lipoprotein A [Coxiella burnetii CbuK_Q154]
gi|212012708|gb|ACJ20088.1| rare lipoprotein A [Coxiella burnetii CbuK_Q154]
Length = 265
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 5 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 62
Query: 62 SLW 64
+
Sbjct: 63 KRY 65
>gi|212212577|ref|YP_002303513.1| rare lipoprotein A [Coxiella burnetii CbuG_Q212]
gi|212010987|gb|ACJ18368.1| rare lipoprotein A [Coxiella burnetii CbuG_Q212]
Length = 265
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 5 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 62
Query: 62 SLW 64
+
Sbjct: 63 KRY 65
>gi|165918600|ref|ZP_02218686.1| rare lipoprotein A family protein [Coxiella burnetii RSA 334]
gi|165917728|gb|EDR36332.1| rare lipoprotein A family protein [Coxiella burnetii RSA 334]
Length = 261
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 1 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 58
Query: 62 SLW 64
+
Sbjct: 59 KRY 61
>gi|209363954|ref|YP_001424431.2| rare lipoprotein A [Coxiella burnetii Dugway 5J108-111]
gi|215919080|ref|NP_819994.2| rare lipoprotein A [Coxiella burnetii RSA 493]
gi|206583965|gb|AAO90508.2| rare lipoprotein A [Coxiella burnetii RSA 493]
gi|207081887|gb|ABS77181.2| rare lipoprotein A [Coxiella burnetii Dugway 5J108-111]
Length = 265
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 5 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 62
Query: 62 SLW 64
+
Sbjct: 63 KRY 65
>gi|153206719|ref|ZP_01945560.1| rare lipoprotein A family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|120577082|gb|EAX33706.1| rare lipoprotein A family protein [Coxiella burnetii 'MSU Goat
Q177']
Length = 261
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 1 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 58
Query: 62 SLW 64
+
Sbjct: 59 KRY 61
>gi|161830475|ref|YP_001596725.1| rare lipoprotein A family protein [Coxiella burnetii RSA 331]
gi|161762342|gb|ABX77984.1| rare lipoprotein A family protein [Coxiella burnetii RSA 331]
Length = 261
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L GC S I + G P + + P + N S +
Sbjct: 1 MKKILLPAALIIFLSGCASHIKD--GPPHFYVNVNKIPNPKPRPLPRSKYGNPSSYTVNG 58
Query: 62 SLW 64
+
Sbjct: 59 KRY 61
>gi|187924821|ref|YP_001896463.1| hypothetical protein Bphyt_2845 [Burkholderia phytofirmans PsJN]
gi|187716015|gb|ACD17239.1| conserved hypothetical lipoprotein [Burkholderia phytofirmans
PsJN]
Length = 56
Score = 40.5 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R S I L + L GC + S G P P + P + +
Sbjct: 1 MIRVSMIALLLVAGLAGCANGPSGHHGGPPPQDPADYHGVPTDSRPPTMVPAPVAP 56
>gi|326424248|ref|NP_762484.2| protein F-like protein [Vibrio vulnificus CMCP6]
gi|319999634|gb|AAO07474.2| Protein F-related protein [Vibrio vulnificus CMCP6]
Length = 198
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 10/159 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-----SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M + S L LL GC + ++ ++ + P +
Sbjct: 1 MKKQS---LFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQK 57
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+S SL + + GD + + + + + L
Sbjct: 58 PQVQSDSLQSFLQRNAIQYQ--ILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNY 115
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ ++G+ + G + S RAE++ +
Sbjct: 116 LNQRSDVDIVIDGHADSTGTTGFNNSLSERRAEEVKKQL 154
>gi|320158835|ref|YP_004191213.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
gi|319934147|gb|ADV89010.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
Length = 200
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 10/159 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-----SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M + S L LL GC + ++ ++ + P +
Sbjct: 3 MKKQS---LFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQK 59
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+S SL + + GD + + + + + L
Sbjct: 60 PQVQSDSLQSFLQRNAIQYQ--ILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNY 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ ++G+ + G + S RAE++ +
Sbjct: 118 LNQRSDVDIVIDGHADSTGTTGFNNSLSERRAEEVKKQL 156
>gi|308051113|ref|YP_003914679.1| peptidase S9 prolyl oligopeptidase active site domain protein
[Ferrimonas balearica DSM 9799]
gi|307633303|gb|ADN77605.1| peptidase S9 prolyl oligopeptidase active site domain protein
[Ferrimonas balearica DSM 9799]
Length = 813
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS----EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M R+ SLL C S+ + PQ+S L + +
Sbjct: 1 MKRWMVAC-SLVSLLSACASNPEAPLADTQASPQLSLAAPVLPGQPLTLKQVMADPDWIG 59
Query: 57 TKKSYSLWRDSHAALFKDSR 76
+ W D ++F +
Sbjct: 60 NAPMGAYWNDDSQSVFYQRK 79
>gi|219849042|ref|YP_002463475.1| glucose/sorbosone dehydrogenase-like protein [Chloroflexus
aggregans DSM 9485]
gi|219543301|gb|ACL25039.1| glucose/sorbosone dehydrogenase-like protein [Chloroflexus
aggregans DSM 9485]
Length = 427
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 18/60 (30%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ + L C + + T P + P + +P + +
Sbjct: 1 MRYTIWFIVLGTIALTACTVASNNPTAQPTLPPTTPVATQTVPIPTVPPTSVPIQPSVDP 60
>gi|116628801|ref|YP_813973.1| hypothetical protein LGAS_0123 [Lactobacillus gasseri ATCC 33323]
gi|311111365|ref|ZP_07712762.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
gi|116094383|gb|ABJ59535.1| hypothetical protein LGAS_0123 [Lactobacillus gasseri ATCC 33323]
gi|311066519|gb|EFQ46859.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
Length = 341
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 1 MYRYSFIVLC---YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M FI L + GC S I + G + + + N + +G ++D
Sbjct: 5 MKNRVFIFLLVGFLVLTMAGCQSQIKQEKGSNEQARIIKKTKANKNISIIGSYRDDADGA 64
Query: 58 KKSYSLWRDSHAA--LFKDSRALNVGDIL--------TVDIRIDDQAVFDNQTGRSRNNS 107
+ + H ++ D + + D L T IR++D V T + ++
Sbjct: 65 AIA---FNSDHTGRYVYADPKNSDTDDQLTWKKTGKNTYIIRLNDSDVSSALTAKLTGST 121
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAE 148
L G ++ + NL+ G + S+A
Sbjct: 122 LVISGDGDWNTETFNKTKNKLNLDDFLSNRKVGNSTSSKAN 162
>gi|330447771|ref|ZP_08311419.1| domain of unknown function family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491962|dbj|GAA05916.1| domain of unknown function family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 136
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F +SLL GC ++ ++ +P + + P + K ++
Sbjct: 1 MKKIFFGTFLLTSLLTGCSTTPKDVAALPSTWAVSAIDGHT--QPVDALPAKPELVIDQN 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
+++ L L D+LT + + N+
Sbjct: 59 FNVTYQGCNTLTG-KLTLTSNDLLTKKLASTRKMCIKNEQAT 99
>gi|238853193|ref|ZP_04643579.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|238834168|gb|EEQ26419.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
Length = 337
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 1 MYRYSFIVLC---YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M FI L + GC S I + G + + + N + +G ++D
Sbjct: 1 MKNRVFIFLLVGFLVLTMAGCQSQIKQEKGSNEQARIIKKTKANKNISIIGSYRDDADGA 60
Query: 58 KKSYSLWRDSHAA--LFKDSRALNVGDIL--------TVDIRIDDQAVFDNQTGRSRNNS 107
+ + H ++ D + + D L T IR++D V T + ++
Sbjct: 61 AIA---FNSDHTGRYVYADPKNSDTDDQLTWKKTGKNTYIIRLNDSDVSSALTAKLTGST 117
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAE 148
L G ++ + NL+ G + S+A
Sbjct: 118 LVISGDGDWNTETFNKTKNKLNLDDFLSNRKVGNSTSSKAN 158
>gi|196229931|ref|ZP_03128795.1| hypothetical protein CfE428DRAFT_1960 [Chthoniobacter flavus
Ellin428]
gi|196226257|gb|EDY20763.1| hypothetical protein CfE428DRAFT_1960 [Chthoniobacter flavus
Ellin428]
Length = 95
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R LC + LL GC ++ +T SP E R P ++ + K +
Sbjct: 1 MMR--IPALCAAVLLTGCATTPPPLTPA---SPASPDAPEGARTPRKTSLGADAATRKTA 55
Query: 61 YSLWRDS 67
L
Sbjct: 56 ALLSAAQ 62
>gi|294775560|ref|ZP_06741070.1| peptidase family M3 [Bacteroides vulgatus PC510]
gi|294450610|gb|EFG19100.1| peptidase family M3 [Bacteroides vulgatus PC510]
Length = 701
Score = 40.1 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 21/188 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ + C ++L GC S + +P + PF F
Sbjct: 1 MKHILLAACAVAILSGCGSQGKQA------APTENPFLSEYTTPFQVPPFDQIKMEH--- 51
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+ F +I + + + ++ +L RK+S F
Sbjct: 52 ------YKPAFLQGMEEQQKEIDAIVNNPEPATFQNTIAALDQSGALLRKVSTVFYGLKS 105
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN-GNLIISGSQEVRVNDE 180
+ K S A LN + A + A+ EN G+L + + +E
Sbjct: 106 ANTNDEMDALSRELSPLQSKHSDDIA--LNEKLFARIKAVYENPGDLDKEQKKLL---EE 160
Query: 181 IRSLNVTG 188
V G
Sbjct: 161 TYKDFVRG 168
>gi|108800932|ref|YP_641129.1| LprE [Mycobacterium sp. MCS]
gi|119870072|ref|YP_940024.1| LprE [Mycobacterium sp. KMS]
gi|126436557|ref|YP_001072248.1| LprE [Mycobacterium sp. JLS]
gi|108771351|gb|ABG10073.1| LprE [Mycobacterium sp. MCS]
gi|119696161|gb|ABL93234.1| LprE [Mycobacterium sp. KMS]
gi|126236357|gb|ABN99757.1| LprE [Mycobacterium sp. JLS]
Length = 180
Score = 40.1 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 9/166 (5%)
Query: 10 CYSSLLFGCHSSISEITGIPQ---MSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
S L GC S S ++ P+ SP ++ + P +G S + +L
Sbjct: 6 AALSALVGCSSGDSTVSKTPEATGPSPAPTAPATPSIAPTVGPPPAAGPSDPCAVNLAAP 65
Query: 67 ----SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ ++L +D R+ V ++ A R+ N+ + G+
Sbjct: 66 EIAKAVSSLPRDPRSNQAWSPEPVAGNYNECAQLSAVIVRANTNAENPNTRAVMFHLGKF 125
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA--AIVTAILENGN 166
P + G +G + A + + + A + NGN
Sbjct: 126 IPTGVPDTYGFNGLDPAGTTGDTVALRYSGEVDGLASIVRFRWNGN 171
>gi|328907774|gb|EGG27538.1| putative beta-hexosaminidase [Propionibacterium sp. P08]
Length = 412
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + I S L GC S ++ P + S + +
Sbjct: 1 MRRRTIIAAGLSMPLAGCVSQGAQPEEPPSTAVTVSPTPPDTPRSYSASPTPTPSKASTR 60
Query: 61 YSLWRDSHAALFKDSRALNV 80
S + + D RA +
Sbjct: 61 AS----TPTPIRLDPRAAKI 76
>gi|320159564|ref|YP_004172788.1| hypothetical protein ANT_01540 [Anaerolinea thermophila UNI-1]
gi|319993417|dbj|BAJ62188.1| hypothetical protein ANT_01540 [Anaerolinea thermophila UNI-1]
Length = 183
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 39/133 (29%), Gaps = 7/133 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + IVL L C S + T +P + G + D I S S +
Sbjct: 1 MRKLTLIVLVAFLALSACASPVPSSTPVPTL---GETRDVTGGGFSFQIPPDYSASVEGG 57
Query: 61 YSLWRDSHAA----LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
D + L+ + + + + I +A+ ++ ++G
Sbjct: 58 RVDLSDKQGSLLLHLYGEPADVGETSLEKIVDSIVSEAMLRGNGVYEKSAVYTVTIAGVK 117
Query: 117 SLFGQQTPQMNGN 129
G
Sbjct: 118 GNGYDLIGTYFGA 130
>gi|153829691|ref|ZP_01982358.1| OmpA family protein [Vibrio cholerae 623-39]
gi|148874812|gb|EDL72947.1| OmpA family protein [Vibrio cholerae 623-39]
Length = 207
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 6/156 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ F VLC + LL GC S +++ + + D + R P G +++ S
Sbjct: 1 MFEMKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMS 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLF 119
++ + A+ ++D R + + + ++ D + N T R S ++ L
Sbjct: 60 NAMTQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLD 118
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 TVAR---FLATESGIDIVLEGHTDNTGSEKLNDKLA 151
>gi|120435607|ref|YP_861293.1| hypothetical protein GFO_1252 [Gramella forsetii KT0803]
gi|117577757|emb|CAL66226.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
Length = 406
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 56/193 (29%), Gaps = 27/193 (13%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQM-SPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + F + S +L C + T P +P + + + + + + +
Sbjct: 1 MKKSFFTAIILSLILVSCSEDDAPSTQPPNFATPADYTFERDGQSTV-------NFTGQT 53
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ L + F D + + + + + +
Sbjct: 54 TRILMAEEVLNAFTD--------------FENTTELSLQAMYDHQEGNTNFTNENLNASD 99
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVND 179
+ + +Y S + + I+ + + N N++ + ++ D
Sbjct: 100 KSVRGKTAASQDYFSANT---TESAAIKALFDSYISGQINEVFPNQNVLATAGSAGQLGD 156
Query: 180 E--IRSLNVTGIV 190
R +N G+V
Sbjct: 157 GAKTRYVNNQGLV 169
>gi|260577911|ref|ZP_05845841.1| lipoprotein LpqB [Corynebacterium jeikeium ATCC 43734]
gi|258603931|gb|EEW17178.1| lipoprotein LpqB [Corynebacterium jeikeium ATCC 43734]
Length = 583
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 67/236 (28%), Gaps = 27/236 (11%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL- 63
V+ LL GC + + S + + P G + S
Sbjct: 17 VLSVVAGLGLLAGCSTLPDDTNPEAISSYAPAPSGQEAPTPTDGQPSDLLLRDFFTASAH 76
Query: 64 ----WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + L + D T+ + D + + + G +
Sbjct: 77 PLRDHQAAKKFLTGGMQGRWQSDAPTMVLDRIDISSEGPGNDSKITYRVRGNIVGTLGVG 136
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSI---------SRAEKLNLLIAAIVTAILENGNLIIS 170
G PQ G+ I R + ++ A + NG ++S
Sbjct: 137 GVFDPQYTAFETSYEMQNVDGQWRISNLPNVVVLDRQDFVSTYRARNIYFPDLNGRALVS 196
Query: 171 GSQEVRVNDEIR-----SLNVTGIVRPQD---VDAHNSVSYDKIAEARISYGGKGR 218
+ + + SL V G PQD N V D A A++S G+G
Sbjct: 197 DRRWIYTGQQSTAASLVSLLVAG---PQDRLKKAVRNLVPED--ATAQVSNDGEGD 247
>gi|321314324|ref|YP_004206611.1| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis
BSn5]
gi|320020598|gb|ADV95584.1| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis
BSn5]
Length = 280
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 50/184 (27%), Gaps = 29/184 (15%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +++ S +L GC + + G N P + S +
Sbjct: 1 MKNIIYLLFIVSIILSGCSTYEGSVVKG-----SGQPSKTPNYHPLIIAHRGASALEPE- 54
Query: 61 YSLWRDSHAALFKDSRALNVG-DILTVDIRIDDQ----AVFDNQTGRSRNNSLHRKLSGG 115
L RA+ D + +D+R A+ D R+ N +
Sbjct: 55 --------HTLLSYKRAIKDKADFIEIDLRQTKDHELVAIHDKDVKRTTNGKGKIQDLTL 106
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
L + L + G + E T NGNL++
Sbjct: 107 SQLKKLNAGKGQKILTIEEIIKEFGLSTKYYIE----------TREDNNGNLVMEQKLID 156
Query: 176 RVND 179
+N
Sbjct: 157 ILNK 160
>gi|282852460|ref|ZP_06261802.1| putative lipoprotein [Lactobacillus gasseri 224-1]
gi|282556202|gb|EFB61822.1| putative lipoprotein [Lactobacillus gasseri 224-1]
Length = 337
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 1 MYRYSFIVLC---YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M FI L + GC S I + G + + + N + +G ++D
Sbjct: 1 MKNRVFIFLLVGFLVLTMAGCQSQIKQEKGSNEQARIIKKTKANKNISIIGSYRDDADGA 60
Query: 58 KKSYSLWRDSHAA--LFKDSRALNVGDIL--------TVDIRIDDQAVFDNQTGRSRNNS 107
+ + H ++ D + + D L T IR++D V T + ++
Sbjct: 61 AIA---FNSDHTGRYVYADPKNSDTDDQLTWKKTGKNTYIIRLNDSDVSSALTAKLTGST 117
Query: 108 LHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAE 148
L G ++ + NL+ G + S+A
Sbjct: 118 LVISGDGDWNTETFNKTKNKLNLDDFLSNRKVGNSTSSKAN 158
>gi|192359449|ref|YP_001980893.1| hypothetical protein CJA_0369 [Cellvibrio japonicus Ueda107]
gi|190685614|gb|ACE83292.1| hypothetical protein CJA_0369 [Cellvibrio japonicus Ueda107]
Length = 159
Score = 40.1 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 6/75 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI------PQMSPMGSSLDENNRMPFLGIDFKNS 54
M + L +L+ GC S + E PQ D +P +
Sbjct: 11 MMLPRLLPLILVALVTGCTSVVHEPAPTRDTQVYPQPDIQQPGPDPAVVVPTPKPEPVAP 70
Query: 55 DSTKKSYSLWRDSHA 69
SL R +
Sbjct: 71 AINPAVESLLRQART 85
>gi|149197533|ref|ZP_01874584.1| Peptidylprolyl isomerase [Lentisphaera araneosa HTCC2155]
gi|149139551|gb|EDM27953.1| Peptidylprolyl isomerase [Lentisphaera araneosa HTCC2155]
Length = 216
Score = 40.1 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPF 46
M F +L + + GC SS S +M+P+ + + P
Sbjct: 1 MMMKLFKLLVLALFIVGCQSSDSSKETQAEMTPVPNKPSKPYSHPV 46
>gi|78065927|ref|YP_368696.1| hypothetical protein Bcep18194_A4456 [Burkholderia sp. 383]
gi|77966672|gb|ABB08052.1| hypothetical protein Bcep18194_A4456 [Burkholderia sp. 383]
Length = 58
Score = 40.1 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI-PQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R+ + + + L GC S + P P + P +D T+
Sbjct: 1 MTRF-MLAVLAAFFLAGCTSDPHQARRGHPPEDPADYHGVPTDMTPPSMLDAPPPKPTQ 58
>gi|114799586|ref|YP_760538.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
gi|114739760|gb|ABI77885.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
Length = 213
Score = 40.1 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 58/223 (26%), Gaps = 51/223 (22%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S + + +L C S + +P+ M +
Sbjct: 1 MIRLSLAAMASALVLAACASQPDPLARPD--APVVVPSQYELGMSTAEELQDAGNVPTAI 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
L + L D ++ +++A + G + L G F
Sbjct: 59 QRLMQ-----LAGDP-----------ELAPEEKAHVLYEMGVLSMSPTGYNLPGAVGYFD 102
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
+ G RAE A V G L I N E
Sbjct: 103 EVIATYP------------GTEWARRAEAKLPEARAQV------GALNIVLESPDSTNTE 144
Query: 181 IRSLNVT-GIVRPQD---------VDAHNSVSYDKIAEARISY 213
+ G R +D ++ N V K+A +I Y
Sbjct: 145 RFYALMNLG--RHEDAIDLMTQYSIEPDNDV---KLAMYQIGY 182
>gi|297580458|ref|ZP_06942385.1| OmpA family protein [Vibrio cholerae RC385]
gi|297536104|gb|EFH74938.1| OmpA family protein [Vibrio cholerae RC385]
Length = 207
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 13/171 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ F VLC + LL GC S +++ + + D + R P G +++
Sbjct: 1 MFEMKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMP 59
Query: 61 YSLWRDSHAALFKDSRAL----------NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
++ + A+ ++D R GD + + + + +
Sbjct: 60 NAMTQPRSAS-YEDLRQYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLD 118
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL-IAAIVTA 160
++ + + G+ + G + K + RA + + + V
Sbjct: 119 TVARFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVAQ 169
>gi|108800633|ref|YP_640830.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869772|ref|YP_939724.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771052|gb|ABG09774.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695861|gb|ABL92934.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 454
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 61/211 (28%), Gaps = 15/211 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST--- 57
M R + C + L GC +P G +++
Sbjct: 1 MKRLTVAGSCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEIANVATLESNAPVLID 60
Query: 58 -KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S+ + + + + D+ + + QT + L G
Sbjct: 61 DVVVGSVRKMTVDDWHAEVQISVKPDV----VVPANAVATVGQTSLLGSMHLALNPPLGE 116
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
S G+ L+ S+ + S + N + I+ N NL +SG +
Sbjct: 117 SPEGRLQAGATIPLSDSSTYPSTERTLSSLSVVANGGGLGQIGDIIHNFNLALSGREP-- 174
Query: 177 VNDEIRSL--NVTGIVRPQDVDAHNSVSYDK 205
EIR L + V D N ++ +
Sbjct: 175 ---EIRQLITRLDNFVGVLDAQRENIIASIQ 202
>gi|296105223|ref|YP_003615369.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059682|gb|ADF64420.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 254
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 47/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSHNSLTPAVNGYQD-------- 52
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 53 -----TGWRNFFVDPQVTRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDARLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 165
>gi|91784508|ref|YP_559714.1| lipoprotein [Burkholderia xenovorans LB400]
gi|91688462|gb|ABE31662.1| Conserved hypothetical lipoprotein [Burkholderia xenovorans
LB400]
Length = 98
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R I L + L GC + S G P P + P + +
Sbjct: 43 MIRVPMIALLLIAGLAGCANDPSGHHGGPPPRDPADYHGVPTDTRPPAMVPAPVTP 98
>gi|126436257|ref|YP_001071948.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236057|gb|ABN99457.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 436
Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 61/211 (28%), Gaps = 15/211 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST--- 57
M R + C + L GC +P G +++
Sbjct: 1 MKRLTVAGSCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEIANVATLESNAPVLID 60
Query: 58 -KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S+ + + + + D+ + + QT + L G
Sbjct: 61 DVVVGSVRKMTVDDWHAEVQISVKPDV----VVPANAVATVGQTSLLGSMHLALNPPLGE 116
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVR 176
S G+ L+ S+ + S + N + I+ N NL +SG +
Sbjct: 117 SPEGRLQAGATIPLSDSSTYPSTERTLSSLSVVANGGGLGQIGDIIHNFNLALSGREP-- 174
Query: 177 VNDEIRSL--NVTGIVRPQDVDAHNSVSYDK 205
EIR L + V D N ++ +
Sbjct: 175 ---EIRQLITRLDNFVGVLDAQRENIIASIQ 202
>gi|89095456|ref|ZP_01168367.1| hypothetical protein MED92_12229 [Oceanospirillum sp. MED92]
gi|89080286|gb|EAR59547.1| hypothetical protein MED92_12229 [Oceanospirillum sp. MED92]
Length = 187
Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 42/165 (25%), Gaps = 18/165 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGI-----DFKNSD 55
M + L L+ GC S P SP ++D + +
Sbjct: 1 MKKTLLAPLISVVLISGCAS-----FEAPSYSPDYQTIDAVKTQSLKAVSLGDFSPMDPQ 55
Query: 56 STKKSYSL----WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ SL ++ + R D+ + I DQA + N
Sbjct: 56 AKVNKISLRAAGFKAKQGTFTQYFRDALEADLTEIGI--YDQASDVTISAELVEN--DLD 111
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+SG G ++ N D +A
Sbjct: 112 ISGFSKGKGLMQVRLMINQGEDVLLDKVYTAVTEFDSSFAAAVAV 156
>gi|157412124|ref|YP_001481465.1| copper/silver efflux system outer membrane protein CusC
[Escherichia coli APEC O1]
gi|218697184|ref|YP_002404851.1| copper/silver efflux system outer membrane protein CusC
[Escherichia coli 55989]
gi|99867149|gb|ABF67794.1| SilC [Escherichia coli APEC O1]
gi|218353916|emb|CAV00346.1| putative outer membrane lipoprotein silC precursor [Escherichia
coli 55989]
Length = 562
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 47/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 102 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSHNSLTPAVNGYQD-------- 153
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 154 -----TGWRNFFVDPQVTRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 208
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 209 GITYSGGLKGDKPTTQEYDARLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 266
>gi|90419250|ref|ZP_01227160.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336187|gb|EAS49928.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 270
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +FI + S L GC S+ +P P + F +
Sbjct: 44 MDRRAFIAVMASVALTGCVSTQEPTRVVPIKPPEPKPVLPAMYRAMPNERFPIPAVDVSN 103
Query: 61 --YSLWRD 66
LWR
Sbjct: 104 LDRRLWRQ 111
>gi|322370609|ref|ZP_08045166.1| hypothetical protein ZOD2009_13996 [Haladaptatus paucihalophilus
DX253]
gi|320549828|gb|EFW91485.1| hypothetical protein ZOD2009_13996 [Haladaptatus paucihalophilus
DX253]
Length = 285
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/188 (11%), Positives = 49/188 (26%), Gaps = 11/188 (5%)
Query: 1 MYRYSFIV---LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGID-FKNSDS 56
M R F+ S + GC + + DE + P + + S
Sbjct: 1 MRRRQFLANGAALLSVFVAGCG--HPPVVLDMDDATANDIADEVSMAPEPDSEEYTLVTS 58
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL-SGG 115
+ + S R LF + + +GD + ++ + +
Sbjct: 59 ARGNGSATRSGPYELFGSTNTVRIGDTFY----EVSETRLESDEATVYDVRIDFDPDDST 114
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
L + + S + + R + + + + ++
Sbjct: 115 PELGAIEYDDLPAADRNRLDSIPSEENTSDRERRDIGIHYGTAEEVGNESVFVPRQRYDI 174
Query: 176 RVNDEIRS 183
+ E R
Sbjct: 175 IIRGENRY 182
>gi|295097783|emb|CBK86873.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT
family [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 461
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 48/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSRNSLTPAVNGYQD-------- 52
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 53 -----TGWRNFFVDPQVTRLITEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L + GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQKYDAGLEFSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 165
>gi|218704874|ref|YP_002412393.1| putative autotransported outer membrane protein involved in cell
adhesion [Escherichia coli UMN026]
gi|293404883|ref|ZP_06648875.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298380527|ref|ZP_06990126.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300900099|ref|ZP_07118293.1| autotransporter beta-domain protein [Escherichia coli MS 198-1]
gi|218431971|emb|CAR12856.1| putative autotransported outer membrane protein involved in cell
adhesion [Escherichia coli UMN026]
gi|291427091|gb|EFF00118.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298277969|gb|EFI19483.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300356378|gb|EFJ72248.1| autotransporter beta-domain protein [Escherichia coli MS 198-1]
Length = 1939
Score = 39.7 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 24/153 (15%)
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ I A D+ + N L+ + + G S +
Sbjct: 249 IYITKTVGATVDDPANSNVFNLSDAVLTDQGGNAALNGATVIEINGSRIALNNDGDISAT 308
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL---------------NVTG-- 188
+ + + I + NG++++ G VN + L VTG
Sbjct: 309 GKDSVVVAITGNDITVNNNGHMVVDGGTAGVVNGDRAILNNRGDAVITNGGTGVIVTGDN 368
Query: 189 -IVR---PQDVDAHNSVSYDKIA-EA-RISYGG 215
++ D+D NSV K+A A RI G
Sbjct: 369 AVINNMGQSDIDGDNSV-SVKVAGNATRIRMEG 400
>gi|91785070|ref|YP_560276.1| RND efflux system outer membrane lipoprotein [Burkholderia
xenovorans LB400]
gi|91689024|gb|ABE32224.1| RND efflux system, outer membrane lipoprotein, NodT subfamily
[Burkholderia xenovorans LB400]
Length = 515
Score = 39.7 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 23/89 (25%), Gaps = 6/89 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSS-----LDENNRMPFLGIDFKNSD 55
M ++S I + + GC + ++ + P
Sbjct: 1 MQKHSLIAVAVALFAAGCTMAPKYERPAAPVTATFPTGGVYDTQPGATQPGQQQPGTTGA 60
Query: 56 STKKSYSLWRD-SHAALFKDSRALNVGDI 83
+ S D F D R + +I
Sbjct: 61 ARTASGQAAADIGWRDFFVDPRMQRLIEI 89
>gi|10957460|ref|NP_051605.1| serine protease [Deinococcus radiodurans R1]
gi|6460889|gb|AAF12593.1|AE001826_62 serine protease, subtilase family [Deinococcus radiodurans R1]
Length = 744
Score = 39.7 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S L + LL C + + P P+ SS + +P ID S
Sbjct: 1 MKRLSLAALSLTVLLAACQQQSTVVNPRP---PVTSSPMQAGGIPTPDIDPARIILDPNS 57
Query: 61 YSLW 64
+ +
Sbjct: 58 GAQY 61
>gi|207723892|ref|YP_002254290.1| lipoprotein [Ralstonia solanacearum MolK2]
gi|206589098|emb|CAQ36060.1| lipoprotein [Ralstonia solanacearum MolK2]
Length = 246
Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 40/159 (25%), Gaps = 6/159 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S + L +LL C + + + ++ +N P T
Sbjct: 2 MLRPSLLCLGVVALLAACSNLQTPAPDDTAPANASTASPTSNASPATPAQPPLPLGTPDG 61
Query: 61 YS-----LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
L +L + RA ++ + D A S +
Sbjct: 62 NGNMTINLPPKDKMSL-SEYRAQTRDRLIQSEHARPDVADCAAHASWIVPRSTNFDQFRL 120
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + + G +S N +
Sbjct: 121 PTGALSEGQAKVEPWDSRFSQSKQGAIKVSSVVSFNAAV 159
>gi|269966123|ref|ZP_06180213.1| putative long-chain fatty acid transport protein [Vibrio
alginolyticus 40B]
gi|269829270|gb|EEZ83514.1| putative long-chain fatty acid transport protein [Vibrio
alginolyticus 40B]
Length = 292
Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 8/195 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP----FLGIDFKNSDS 56
M S IV+ S L C ++ + + + + L + +
Sbjct: 1 MKNLSKIVVASSLLT--CAAAQAGGLYLYETTASDIGLASAGMAARAQDASVMAANPAGL 58
Query: 57 TKKSYSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S + + L+ D++ GD V I A + +L L G
Sbjct: 59 ANVSGKSFSGNLIGLYGDAQLDTMTGDAGNV-IGFVPMASAFYSQQVNDKWTLGIGLYGN 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ L + ++ +L+ + S + ++N + ++ G + +
Sbjct: 118 YGLGLEYEGLLDNHLDIPTATTQALTIQPSASYRINDHWSVGAALGIQYGMYEVETKGVL 177
Query: 176 RVNDEIRSLNVTGIV 190
NDE + V G V
Sbjct: 178 NFNDEDQDTQVNGRV 192
>gi|190572234|ref|YP_001970079.1| putative murein degrading transcglycosylase [Stenotrophomonas
maltophilia K279a]
gi|190010156|emb|CAQ43764.1| putative murein degrading transcglycosylase [Stenotrophomonas
maltophilia K279a]
Length = 388
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ +L +++L GC ++ +P + + + ++ + +
Sbjct: 9 KRRHCILLAAAVLAGCATTAPRTGSEAP-TPTMPPAATYAKAAWSALPPVSNSDLQAGFV 67
Query: 63 LWRDSHAALFKD 74
WR S L D
Sbjct: 68 AWRSSCTRLKND 79
>gi|220926876|ref|YP_002502178.1| polysaccharide export protein [Methylobacterium nodulans ORS 2060]
gi|219951483|gb|ACL61875.1| polysaccharide export protein [Methylobacterium nodulans ORS 2060]
Length = 389
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 19/175 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRM----PFLGIDFKNSDST 57
R I LC + + GC + + P S + D + ID +
Sbjct: 1 MRPLPIALCAALAVSGCSAILPAAG--PSTSAVTEGADVATDQGLLARYEIIDVNPAVVE 58
Query: 58 KKSYSLWRDSHAALFKDSRA-----LNVGDILTVDIRIDDQAVFDNQT----GRSRNNSL 108
A+ F D R + VGD++TV I + + S +
Sbjct: 59 ALRGRPLDSLLAS-FGDRRPSVEPVIGVGDVITVTIWEASTGGLFSGSLLPDRFSAGSKS 117
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRA---EKLNLLIAAIVTA 160
+ G T G + G + I + + + + VT
Sbjct: 118 ATIPPQVVTRDGAITMPYAGRIQVAGKRVQEVQAQIEQELAGKAIEPQVIVTVTQ 172
>gi|257869765|ref|ZP_05649418.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257803929|gb|EEV32751.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 302
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 32/110 (29%), Gaps = 8/110 (7%)
Query: 1 MYRYSFIVLCYSSLLFGC--HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M ++ F LC LL GC + + P ++ + + +
Sbjct: 1 MKKWLF--LCLVVLLSGCQAATHSNVSAQKSTQKPTETTTVSAETSTTEPVQKTTTPTLF 58
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILT--VDIRIDDQAVFDNQTGRSRNN 106
++ A+ + D ++ + + I + S+
Sbjct: 59 IHG--YQGGPASFGGMIQRFAQKDWVSNEMVLTISPDGTVSTEGVLSKKA 106
>gi|254774007|ref|ZP_05215523.1| hypothetical protein MaviaA2_04934 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 592
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG-------IDFKNS 54
R V+ +++L GC +SP + P G F
Sbjct: 44 KRALAAVIGIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG 103
Query: 55 DSTKKSYSLWRDSH-AALFKDSRALNVGDILTV 86
+S ++ YS W S+ A+L R L D T+
Sbjct: 104 NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTL 136
>gi|313204082|ref|YP_004042739.1| hypothetical protein Palpr_1611 [Paludibacter propionicigenes WB4]
gi|312443398|gb|ADQ79754.1| hypothetical protein Palpr_1611 [Paludibacter propionicigenes WB4]
Length = 474
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 51/213 (23%), Gaps = 50/213 (23%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSL---------------------- 38
M + ++ ++ L C+S++ EI P +
Sbjct: 1 MLKNILYIIIFALALSSCNSTLDEINKNPNATETPLPPYLLTSTLKQGADLYWGSESNFN 60
Query: 39 -----DENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL---------FKDSRALNVGDIL 84
+ + S SLW ++ L F D +A + +
Sbjct: 61 SSLLFVQQWAKIQYAEPDRYDVSNTSFTSLWNTGYSTLITDLNTILNFSDQQANSNYKGI 120
Query: 85 TVDIR--------------IDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
+ +R +A + ++ L NG +
Sbjct: 121 ALTLRSWTFLLLTDAYGSIPYKEAGLKVTPAYNTQKEVYTGLLEDLKQAQSLLGTANGTV 180
Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILE 163
D + L L IA ++
Sbjct: 181 TGDLAYKGNIAKWKKLVNSLRLRIALRISDKEP 213
>gi|255530905|ref|YP_003091277.1| hypothetical protein Phep_0994 [Pedobacter heparinus DSM 2366]
gi|255343889|gb|ACU03215.1| hypothetical protein Phep_0994 [Pedobacter heparinus DSM 2366]
Length = 407
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 6/196 (3%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+I++ L C I + P++ ++ + L
Sbjct: 17 WILILSVLFLSACSPKIRTESKQPEVPKEVPKTEKPAAKFEQASISLLAPFRLNEIRLKT 76
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ A + + + A++ + I + + + + ++ G
Sbjct: 77 ATKAEVERAAMAIDFYQGFKLGIDSAAASGQNFKLKVYDTQDNNAQIGALIDNGGLMGSN 136
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
+ + G SISR + ++A N NLI VN+ +
Sbjct: 137 LIVGPVFPEGLKYITNYSISRNIPVVNPLSAAHPDEFTNPNLI------SIVNNVDQHAA 190
Query: 186 VTGIVRPQDVDAHNSV 201
G ++ + N+V
Sbjct: 191 KIGSYISKNYNPANTV 206
>gi|148654323|ref|YP_001274528.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
gi|148566433|gb|ABQ88578.1| Glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
Length = 451
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 18/71 (25%), Gaps = 10/71 (14%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEIT----------GIPQMSPMGSSLDENNRMPFLGID 50
M +S + + L GC+S + +P+ + P
Sbjct: 1 MRLFSILFVFLIVALAGCNSIPARTPLADRPAGTLIPTAATTPVPPAQPTAATTPVPPGQ 60
Query: 51 FKNSDSTKKSY 61
+ +
Sbjct: 61 PTAATTPVPPG 71
>gi|241663431|ref|YP_002981791.1| lipoprotein transmembrane [Ralstonia pickettii 12D]
gi|240865458|gb|ACS63119.1| lipoprotein transmembrane [Ralstonia pickettii 12D]
Length = 278
Score = 39.3 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 36/163 (22%), Gaps = 10/163 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L +LL C S++ P ++ I +
Sbjct: 1 MLRPKLLCLGVVALLAAC-SNLQTEPTNPSGQATNATPSTPAAQAKPVIQPAATTPPIVF 59
Query: 61 YSLWRDSHAAL---------FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
S + + RA ++ + D A S +
Sbjct: 60 GSTDSSGTTTVNLPSKDKMSLSEYRAQTRDRLIQSEGARPDVADCAAHASWIIPRSTNFD 119
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + G +S N +
Sbjct: 120 QFRLPTGALSNDQAKVEPWDSRFSSSKQGAIKVSSVVSFNAAV 162
>gi|320352772|ref|YP_004194111.1| hypothetical protein Despr_0644 [Desulfobulbus propionicus DSM
2032]
gi|320121274|gb|ADW16820.1| hypothetical protein Despr_0644 [Desulfobulbus propionicus DSM
2032]
Length = 125
Score = 39.3 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + FI L +L GC + + + + G S ++ + D + S
Sbjct: 1 MRQSLFICLLAFLVLAGCSTKQVRHLASDASLIKPGQSTVKDVQKYLGEPDSRREVSPGV 60
Query: 60 SYSLWRDSHAALFK 73
S ++ + LF
Sbjct: 61 SEFVYYEDRPGLFG 74
>gi|58000302|ref|YP_190196.1| copper/silver efflux system outer membrane protein CusC
[Escherichia coli]
gi|57903214|gb|AAT37591.2| outer membrane efflux protein [Escherichia coli]
Length = 461
Score = 39.3 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 47/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSRNSLTPAVNGYQD-------- 52
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 53 -----TGWRNFFVDPQVTRLITEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDAGLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 165
>gi|254471389|ref|ZP_05084791.1| serine proteinase, putative [Pseudovibrio sp. JE062]
gi|211959535|gb|EEA94733.1| serine proteinase, putative [Pseudovibrio sp. JE062]
Length = 1768
Score = 39.3 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 52/160 (32%), Gaps = 15/160 (9%)
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
+ + G T+ R +L ++ G S G T
Sbjct: 871 TGEVLFYGGDLSYVSGSDATITNNFKMHDDGTLDVQSGRTLTLTGDITDGGSSPGTLTIG 930
Query: 126 MNGNLNYDGGGASSGKGSISRAEKLNLLIAAIV---TAILENGNLIISGSQEVRVNDEIR 182
G +N G + SG + + + T L NGNL+ G+ +V ++ R
Sbjct: 931 SGGTVNLQGDNSFSGGLIVQENSSVEFTDPDRLGLGTTTLSNGNLLYQGTTDVNLS---R 987
Query: 183 SLNVTGIVRPQDVDAHNSVSYDKIAEARISYG--GKGRTT 220
+G D+D N+V + IS G G +
Sbjct: 988 IAIASGTSNTIDID-DNTV------DLEISSNLSGSGNLS 1020
>gi|268567628|ref|XP_002647825.1| Hypothetical protein CBG23608 [Caenorhabditis briggsae]
gi|187040929|emb|CAP20421.1| hypothetical protein CBG_23608 [Caenorhabditis briggsae AF16]
Length = 102
Score = 39.3 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + +L C ++ T ++P L + P S S
Sbjct: 1 MRTLIVFSSLLVILAQCGYPVAYPTTPSYVTPPSYPLPKYPAAPTYSAVPAPSISISDET 60
Query: 62 SLWR--DSHAALFKDSRALNVG 81
S++ DS + K ++A +
Sbjct: 61 SVYNEEDSQSEFRKRAKARTMK 82
>gi|223983508|ref|ZP_03633693.1| hypothetical protein HOLDEFILI_00974 [Holdemania filiformis DSM
12042]
gi|223964503|gb|EEF68830.1| hypothetical protein HOLDEFILI_00974 [Holdemania filiformis DSM
12042]
Length = 227
Score = 39.3 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 12/106 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGI--------DFKN 53
+ F + LL GC S+ E P +P S P K+
Sbjct: 1 MKKLFAIALSVLLLAGCASTPKEC--PPCATPDASEPTTAAPAPLPEPRDTTKTYKPSKD 58
Query: 54 SDSTKKSYSLWRDSHAALFKDSRALNV--GDILTVDIRIDDQAVFD 97
+ + +W +++ D+ + D+L +D+R +
Sbjct: 59 AADEACTAEVWATGCSSINVDNLTEYLGRDDVLYIDLRDYNDYAKK 104
>gi|269966525|ref|ZP_06180608.1| hypothetical protein VMC_20380 [Vibrio alginolyticus 40B]
gi|269828869|gb|EEZ83120.1| hypothetical protein VMC_20380 [Vibrio alginolyticus 40B]
Length = 192
Score = 39.3 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 15/166 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI---PQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R F+ + L GC S+ + P++ P+ S + + P L + S
Sbjct: 1 MKRVFFLSIALFVGLTGCSSAPQTKGAMYLLPKVEPVTLSSSDIAQRPTLVVRPVTLASY 60
Query: 58 KK-SYSLWRDSHAALFK---DSRALNVGDILTVDIRIDDQ--------AVFDNQTGRSRN 105
S ++R S + + + A ++ + +T + + + A +N +S
Sbjct: 61 LNDSGIVYRTSETQVIQAKHNQWAHSISEQITQRVVAELRHKQSHYWPAEMNNLLDQSSE 120
Query: 106 NSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
L L+ + L + G I ++ L
Sbjct: 121 AKLQLTLNKFNGSYKGNIEIEGEWLLINAEGKVENSAPIQISKPLQ 166
>gi|260600072|ref|YP_003212810.1| copper/silver efflux system outer membrane protein CusC
[Cronobacter turicensis z3032]
gi|260219419|emb|CBA34771.1| Probable outer membrane lipoprotein silC [Cronobacter turicensis
z3032]
Length = 498
Score = 39.3 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 47/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 38 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSHNSLTPAVNGYQD-------- 89
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 90 -----TGWRNFFVDPQVTRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 144
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 145 GITYSGGLKGDKPTTQEYDARLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 202
>gi|300703692|ref|YP_003745294.1| hypothetical protein RCFBP_11377 [Ralstonia solanacearum CFBP2957]
gi|299071355|emb|CBJ42674.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 245
Score = 39.3 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 40/159 (25%), Gaps = 6/159 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S + L +LL C + + + ++ +N P T
Sbjct: 1 MLRPSLLCLGVVALLAACSNLQTPAPDDTAQANASTASPTSNAAPATPAQPTLPLGTPDG 60
Query: 61 YS-----LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
L +L + RA ++ + D A S +
Sbjct: 61 NGNMTINLPPKDKMSL-SEYRAQTRDRLIQSEHARPDVADCAAHASWIVPRSTNFDQFRL 119
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + + G +S N +
Sbjct: 120 PTGALSEGQAKVEPWDSRFSQSKQGAIKVSSVVSFNAAV 158
>gi|269926214|ref|YP_003322837.1| hypothetical protein Tter_1099 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789874|gb|ACZ42015.1| hypothetical protein Tter_1099 [Thermobaculum terrenum ATCC
BAA-798]
Length = 480
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Query: 1 MYRYSFIVLCYSSLLFGC--HSSISEITGIPQMSPM-GSSLDENNRMPFLGIDFKNSDST 57
M F+++ L C S T P++SP+ ++ +
Sbjct: 1 MRSIRFLIIGALLFLSACGGSEQKSPTTPQPEVSPVITVTVARTAPTAKPKVTTIKPTPP 60
Query: 58 KKSYS 62
S
Sbjct: 61 ASPGS 65
>gi|320161147|ref|YP_004174371.1| hypothetical protein ANT_17450 [Anaerolinea thermophila UNI-1]
gi|319995000|dbj|BAJ63771.1| hypothetical protein ANT_17450 [Anaerolinea thermophila UNI-1]
Length = 227
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 1 MYRYSFIVL--CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M +Y FI+L C S L C + +P SP S N +
Sbjct: 8 MKKYWFIILAVCASLLFSACQPQHENPSQMP--SPYPSGEIPNPYQHPYPPFEPAEEEQ 64
>gi|86358471|ref|YP_470363.1| glycoside hydrolase protein [Rhizobium etli CFN 42]
gi|86282573|gb|ABC91636.1| glycoside hydrolase protein [Rhizobium etli CFN 42]
Length = 265
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F VL + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVLPLAILLAGCSSSGHDYLETASIKPKTR-FQDTDPQDFGPKHPQQNAIHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + +
Sbjct: 60 ISKWQGDIDWSTVRNSGVAFAFIKATEGKDRVDPRFDEYWREARAAG 106
>gi|38347965|ref|NP_941214.1| copper/silver efflux system outer membrane protein CusC [Serratia
marcescens]
gi|156936339|ref|YP_001440255.1| copper/silver efflux system outer membrane protein CusC
[Cronobacter sakazakii ATCC BAA-894]
gi|170766787|ref|ZP_02901240.1| cation efflux system protein CusC [Escherichia albertii TW07627]
gi|238910395|ref|ZP_04654232.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|38259442|emb|CAE51670.1| outer-membrane efflux lipoprotein (silver resistance) [Serratia
marcescens]
gi|156534593|gb|ABU79419.1| hypothetical protein ESA_04239 [Cronobacter sakazakii ATCC BAA-894]
gi|170124225|gb|EDS93156.1| cation efflux system protein CusC [Escherichia albertii TW07627]
gi|322614030|gb|EFY10966.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322617922|gb|EFY14815.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322625464|gb|EFY22290.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629929|gb|EFY26702.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322632182|gb|EFY28933.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636467|gb|EFY33174.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322644677|gb|EFY41213.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651300|gb|EFY47684.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322652786|gb|EFY49125.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322659088|gb|EFY55340.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322663210|gb|EFY59414.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322668697|gb|EFY64850.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322674499|gb|EFY70592.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678295|gb|EFY74356.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682448|gb|EFY78469.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322684161|gb|EFY80167.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192283|gb|EFZ77515.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196290|gb|EFZ81442.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323201438|gb|EFZ86504.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206452|gb|EFZ91413.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212044|gb|EFZ96871.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323216949|gb|EGA01672.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323220316|gb|EGA04770.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323224363|gb|EGA08652.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323228291|gb|EGA12422.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233441|gb|EGA17534.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323237097|gb|EGA21164.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323243688|gb|EGA27704.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246070|gb|EGA30057.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323250846|gb|EGA34724.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257658|gb|EGA41344.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261867|gb|EGA45434.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267741|gb|EGA51223.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323268621|gb|EGA52088.1| copper/silver efflux system outer membrane protein CusC [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|323974960|gb|EGB70070.1| outer membrane efflux protein [Escherichia coli TW10509]
Length = 461
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 47/178 (26%), Gaps = 29/178 (16%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSHNSLTPAVNGYQD-------- 52
Query: 61 YSLWRDSHAALFKDSRALNV--------GDILTVDIRIDDQAVFDNQTGRSR----NNSL 108
F D + + D+ +++++ N T R N S
Sbjct: 53 -----TGWRNFFVDPQVTRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASS 107
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
SGG T + + L GK R A IL
Sbjct: 108 GITYSGGLKGDKPTTQEYDARLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHIL 165
>gi|88859229|ref|ZP_01133869.1| putative enzymatic protein [Pseudoalteromonas tunicata D2]
gi|88818246|gb|EAR28061.1| putative enzymatic protein [Pseudoalteromonas tunicata D2]
Length = 823
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 51/171 (29%), Gaps = 6/171 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSI--SEITGIPQMSP--MGSSLDENNRMPFLGIDFKNSDS 56
M + S I L S L C +++ + ++P + ++ + + +
Sbjct: 1 MIKQSLIALAILSTLTACQTTVIQKDTKETTTIAPVIVNNTTSGAGLTLEQAMAHPDWFA 60
Query: 57 TKKSYSLWRDSHAALFKDSRA--LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
S W A+++ + + D + + I Q + + + + S
Sbjct: 61 RSPERSFWSADSASVYFQQKQLGSELRDTFSRQLSITAQNLPVELSKLHEIGAANSVFSE 120
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
L + S ++A L L + + NG
Sbjct: 121 DKQLNAYVFEGNIFVKDIKNNSIKQVTRSKAKASSLQFLNSGELAYREGNG 171
>gi|209520883|ref|ZP_03269624.1| conserved hypothetical lipoprotein [Burkholderia sp. H160]
gi|209498690|gb|EDZ98804.1| conserved hypothetical lipoprotein [Burkholderia sp. H160]
Length = 55
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 18/55 (32%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R + L + + GC + S G P P + P + ++
Sbjct: 1 MTRVLTLALLLCAGVAGCADNPSAHHGTPPQDPADYHGVPTDDRPPAMVPAPDAQ 55
>gi|209550195|ref|YP_002282112.1| glycoside hydrolase family 25 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535951|gb|ACI55886.1| glycoside hydrolase family 25 [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 265
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F VL + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVLPLAILLAGCSSSGHDYLETASIKPKTR-FKDTDPQDFGPKHPEQNQVHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + +
Sbjct: 60 ISKWQGDIDWATVKNSGVAFAFIKATEGKDRVDPRFDEYWREARAAG 106
>gi|300934102|ref|ZP_07149358.1| hypothetical protein CresD4_08533 [Corynebacterium resistens DSM
45100]
Length = 229
Score = 38.9 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + +++ L GC S+ + PQ +P + + + + TK+S
Sbjct: 1 MKRITAMLVAAGICLAGCSSNEDDSASAPQENPSTTESVQETAKETQEKEKASPAPTKRS 60
>gi|289208463|ref|YP_003460529.1| peptidase M23 [Thioalkalivibrio sp. K90mix]
gi|288944094|gb|ADC71793.1| Peptidase M23 [Thioalkalivibrio sp. K90mix]
Length = 246
Score = 38.9 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 48/193 (24%), Gaps = 14/193 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG-----------IDFKNSD 55
+ +L+ GC + T + + + +
Sbjct: 5 LAGLVVALISGCATRAPSGTSEASRASGPVPATHTVQREETLYRIAQRYGLDWREVAQRN 64
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ Y ++ L +R+ + DN +G SR +
Sbjct: 65 AISAPYIIYPGQELRLRGAARSSPPQAPRQQRQEPTTASRSDNDSGSSREAARSDPPPDD 124
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ G R +++ + V + G L+ G +
Sbjct: 125 PGGWRWPADGDVLRGFSSSGTRRGLAIGGERGDEVRATRSGEV--VYAGGGLVGYGR-LI 181
Query: 176 RVNDEIRSLNVTG 188
+ + R L+ G
Sbjct: 182 ILKHDARFLSAYG 194
>gi|328470284|gb|EGF41195.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus 10329]
Length = 367
Score = 38.9 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 8/195 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP----FLGIDFKNSDS 56
M S IV+ S L C ++ + + + + L + +
Sbjct: 1 MKNLSKIVVASSLLT--CAAAQAGGLYLYETTASDIGLASAGMAARAQDASVMAANPAGL 58
Query: 57 TKKSYSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S + + L+ D++ GD V I A + +L L G
Sbjct: 59 ANVSGKSFSGNLIGLYGDAQLDTMTGDAGNV-IGFVPMASAFYSQQVNDKWTLGIGLYGN 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ L + ++ +L+ + S + ++N + ++ G + +
Sbjct: 118 YGLGLEYEGLLDNHLDIPTATTQALTIQPSASYRINDHWSVGAALGIQYGMYEVETKGAL 177
Query: 176 RVNDEIRSLNVTGIV 190
NDE + V G V
Sbjct: 178 NFNDEDQDTQVNGRV 192
>gi|330967873|gb|EGH68133.1| lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 130
Score = 38.9 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 16/96 (16%), Gaps = 17/96 (17%)
Query: 1 MYRYSFIVLC-YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS----- 54
MYR + I L L C + P P +
Sbjct: 1 MYRTARITLLGLVVGLSACAVQHPAPPRSQEPIPTQPGATRQGTTPAEPAKAPVAGPKTS 60
Query: 55 ---DSTKKSYSLWRD--------SHAALFKDSRALN 79
S W F R
Sbjct: 61 ASFAPPPGGGSRWDPRLGVYVMEGQPNTFYRQRTYY 96
>gi|327191329|gb|EGE58361.1| glycoside hydrolase protein [Rhizobium etli CNPAF512]
Length = 265
Score = 38.9 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F V+ + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVVPLAILLAGCSSSGHDYLETASIKPKTR-FQDTDPQDFGPKHPQQNAIHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + + +
Sbjct: 60 ISKWQGDIDWATVRNSGVAFAFIKATEGKDRVDPRFDEYWREARNAG 106
>gi|296158179|ref|ZP_06841011.1| lipoprotein [Burkholderia sp. Ch1-1]
gi|295891515|gb|EFG71301.1| lipoprotein [Burkholderia sp. Ch1-1]
Length = 56
Score = 38.9 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R L + L GC + S G P P+ + P + +
Sbjct: 1 MIRIPMTALLLIAGLAGCANDPSGHHGGPPPRDPVDYHGVPTDTRPPAMVPAPVTP 56
>gi|332250199|ref|XP_003274241.1| PREDICTED: solute carrier family 25 member 45-like isoform 2
[Nomascus leucogenys]
gi|332250201|ref|XP_003274242.1| PREDICTED: solute carrier family 25 member 45-like isoform 3
[Nomascus leucogenys]
Length = 246
Score = 38.9 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 8/157 (5%)
Query: 13 SLLFGCHSSISEITGIPQMSPMG---SSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSH 68
L GC + + + + E P + + S++R +
Sbjct: 60 IFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPP-PRYQGPVHCAASIFREEGP 118
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+ + AL + D T+ I Q N + G +
Sbjct: 119 RGLFRGAWALTLRDTPTMGIYFITYEGLCRQYTPEGQNPNSATVLVAGGFAGIASWVAAT 178
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
L+ + R ++ +V+++ + G
Sbjct: 179 PLDVIKSRM---QMDGLRRRAYQGMLDCMVSSVRQEG 212
>gi|332250197|ref|XP_003274240.1| PREDICTED: solute carrier family 25 member 45-like isoform 1
[Nomascus leucogenys]
Length = 288
Score = 38.9 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 8/157 (5%)
Query: 13 SLLFGCHSSISEITGIPQMSPMG---SSLDENNRMPFLGIDFKNSDSTKKSYSLWR-DSH 68
L GC + + + + E P + + S++R +
Sbjct: 102 IFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPP-PRYQGPVHCAASIFREEGP 160
Query: 69 AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG 128
LF+ + AL + D T+ I Q N + G +
Sbjct: 161 RGLFRGAWALTLRDTPTMGIYFITYEGLCRQYTPEGQNPNSATVLVAGGFAGIASWVAAT 220
Query: 129 NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
L+ + R ++ +V+++ + G
Sbjct: 221 PLDVIKSRM---QMDGLRRRAYQGMLDCMVSSVRQEG 254
>gi|91789968|ref|YP_550920.1| rare lipoprotein A [Polaromonas sp. JS666]
gi|91699193|gb|ABE46022.1| rare lipoprotein A [Polaromonas sp. JS666]
Length = 213
Score = 38.9 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+IV ++L GC ++ P P G + P D +
Sbjct: 17 RVWIVASLLAVLAGCATAPP--VQPPSGFPPGPATKPAVTAPTAPADPMGGPAPANPS 72
>gi|28900327|ref|NP_799982.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838998|ref|ZP_01991665.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AQ3810]
gi|260363670|ref|ZP_05776463.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus K5030]
gi|260880896|ref|ZP_05893251.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AN-5034]
gi|260896038|ref|ZP_05904534.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus Peru-466]
gi|28808638|dbj|BAC61815.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|149747542|gb|EDM58478.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AQ3810]
gi|308087068|gb|EFO36763.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus Peru-466]
gi|308091586|gb|EFO41281.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AN-5034]
gi|308114462|gb|EFO52002.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus K5030]
Length = 367
Score = 38.9 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 8/195 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP----FLGIDFKNSDS 56
M S IV+ S L C ++ + + + + L + +
Sbjct: 1 MKNLSKIVVASSLLT--CAAAQAGGLYLYETTASDIGLASAGMAARAQDASVMAANPAGL 58
Query: 57 TKKSYSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S + + L+ D++ GD V I A + +L L G
Sbjct: 59 ANVSGKSFSGNLIGLYGDAQLDTMTGDAGNV-IGFVPMASAFYSQQVNDKWTLGIGLYGN 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ L + +N +L+ + S + ++N + ++ G + +
Sbjct: 118 YGLGLEYEGLLNNHLDIPTATTQALTIQPSASYRINDHWSVGAALGIQYGMYEVETKGAL 177
Query: 176 RVNDEIRSLNVTGIV 190
NDE + + G V
Sbjct: 178 NFNDEDQDTQLNGRV 192
>gi|115358788|ref|YP_775926.1| putative esterase [Burkholderia ambifaria AMMD]
gi|115284076|gb|ABI89592.1| putative esterase [Burkholderia ambifaria AMMD]
Length = 314
Score = 38.9 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + +LL GC ++ G P +SP GSS +P I +
Sbjct: 1 MRRLALP--FAVALLAGCLATAHATPGGPAVSP-GSSAPAGAIVPPATIGPAAQEPPLNP 57
Query: 61 YS 62
S
Sbjct: 58 GS 59
>gi|291515909|emb|CBK65119.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Alistipes
shahii WAL 8301]
Length = 711
Score = 38.9 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 8/108 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + L GC + ++ E L + S
Sbjct: 1 MKKILLMTAIAAMGLGGCDKRPEPLKIDNALTA------EEIAAGRLTPEVMWKMSRAGG 54
Query: 61 YSLWRDSHAALFK--DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
SL D L++ D + T+ + D T + N+
Sbjct: 55 SSLSPDGRTLLYQQTDYNMAENRGVTTIRVEDMDSKAVTCLTDFTSNS 102
>gi|148264657|ref|YP_001231363.1| peptidylprolyl isomerase, FKBP-type [Geobacter uraniireducens Rf4]
gi|146398157|gb|ABQ26790.1| peptidylprolyl isomerase, FKBP-type [Geobacter uraniireducens Rf4]
Length = 421
Score = 38.9 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 6/143 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ S ++L S L GC + + + P + + + S + + S
Sbjct: 16 KRSLVILAAVSALAGCAGQPLKSAAVQETPPAAGTNQAASPEKANAALDEAVKSGRTTAS 75
Query: 63 LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ L + + GD++TVD + D A +T R+ + + +
Sbjct: 76 I------DLNETPGTVQKGDVVTVDYTVTDAAGKLLRTSRAAVANDPGQRLAPEEIIAGT 129
Query: 123 TPQMNGNLNYDGGGASSGKGSIS 145
+ G G A GK S+
Sbjct: 130 PAAIPGLGEAVPGMAIGGKKSVK 152
>gi|114798571|ref|YP_759223.1| hypothetical protein HNE_0493 [Hyphomonas neptunium ATCC 15444]
gi|114738745|gb|ABI76870.1| hypothetical protein HNE_0493 [Hyphomonas neptunium ATCC 15444]
Length = 179
Score = 38.9 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R ++ L +LL C + E + + + P + ++ +
Sbjct: 54 MTRLRYLPLFAFALLAACGPAPEEAPAPISEAAQPAVPEAEPETPAPEMPAEDMADS 110
>gi|54302838|ref|YP_132831.1| hypothetical protein PBPRB1159 [Photobacterium profundum SS9]
gi|46916262|emb|CAG23031.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 197
Score = 38.9 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGI--DFKNSDSTK 58
M ++ ++ ++ L GC S + + + S+ + L + + ++
Sbjct: 1 MKKHLLFMVAAAAFLAGCSSQPDAVNSYLLPTGVQSTTSQIGSNQPLLVIRPVEMAEHLA 60
Query: 59 KSYSLWRDSHAALFKDSR---ALNVGDILTVDIRIDDQAVFDN 98
+ +++ S + + + A ++G LT I D ++
Sbjct: 61 GTGLVYQVSDTEVVQAQQNLWAESIGKQLTRRINQDLRSKQSQ 103
>gi|300870551|ref|YP_003785422.1| neuraminidase (sialidase)-like protein [Brachyspira pilosicoli
95/1000]
gi|300688250|gb|ADK30921.1| neuraminidase (sialidase)-like protein [Brachyspira pilosicoli
95/1000]
Length = 432
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 42/136 (30%), Gaps = 12/136 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S+LL C + + G + + + D + S
Sbjct: 1 MSKLKLFLILASALLISCANPNDPGNDTTEGGNGGGGTTPDGKPSWYLSDAQQS------ 54
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVD-IRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S+++ + +F + GDI + I + + + + SG ++
Sbjct: 55 -SVYQPNPVIVFDSKQ----GDIYRIAGIVETTKGTLVAVSDSRKTSESDVGFSGAANID 109
Query: 120 GQQTPQMNGNLNYDGG 135
+G +
Sbjct: 110 VVVKRSTDGGKTWGQA 125
>gi|260903098|ref|ZP_05911493.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AQ4037]
gi|308107765|gb|EFO45305.1| putative long-chain fatty acid transport protein [Vibrio
parahaemolyticus AQ4037]
Length = 361
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 8/195 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP----FLGIDFKNSDS 56
M S IV+ S L C ++ + + + + L + +
Sbjct: 1 MKNLSKIVVASSLLT--CAAAQAGGLYLYETTASDIGLASAGMAARAQDASVMAANPAGL 58
Query: 57 TKKSYSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S + + L+ D++ GD V I A + +L L G
Sbjct: 59 ANVSGKSFSGNLIGLYGDAQLDTMTGDAGNV-IGFVPMASAFYSQQVNDKWTLGIGLYGN 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ L + ++ +L+ + S + ++N + ++ G + +
Sbjct: 118 YGLGLEYEGLLDNHLDIPTATTQALTIQPSASYRINDHWSVGAALGIQYGMYEVETKGAL 177
Query: 176 RVNDEIRSLNVTGIV 190
NDE + V G V
Sbjct: 178 NFNDEDQDTQVNGRV 192
>gi|172063518|ref|YP_001811169.1| putative esterase [Burkholderia ambifaria MC40-6]
gi|171996035|gb|ACB66953.1| putative esterase [Burkholderia ambifaria MC40-6]
Length = 314
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + +LL GC ++ G P +SP GSS +P + +
Sbjct: 1 MRRLALP--FAVALLAGCLATAHATPGAPAVSP-GSSAPAGAIVPPATVGPATQEPPLNP 57
Query: 61 YS 62
S
Sbjct: 58 GS 59
>gi|116253069|ref|YP_768907.1| glycosyl transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257717|emb|CAK08815.1| putative glycosyl transferase [Rhizobium leguminosarum bv. viciae
3841]
Length = 265
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F VL + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVLPLAILLAGCSSSGYDYLETASIKPKTR-FKDTDPQDFGPKHPQQNQVHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + +
Sbjct: 60 ISKWQGDIDWRTVKNSGVAFAFIKATEGKDRVDSRFDEYWREARAAG 106
>gi|109897907|ref|YP_661162.1| peptidyl-dipeptidase Dcp [Pseudoalteromonas atlantica T6c]
gi|109700188|gb|ABG40108.1| peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A
[Pseudoalteromonas atlantica T6c]
Length = 736
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 61/198 (30%), Gaps = 16/198 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + +L C + + + + P G KN+ +S
Sbjct: 1 MKKALLSPVALAVMLAAC---QPDTASQTNQNAAQQKASQQDTSPLNGDITKNNPLLAES 57
Query: 61 YSLWR---------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ + + + F + A N +I + + + F+N +
Sbjct: 58 NAPFGVPEFSKIKIEHYEPAFDFAIAQNQQEIDDIALS-SEAPTFENTIEAMEKSGQALN 116
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL-ENGNLIIS 170
T + + +++ LN + A V ++ + NL +
Sbjct: 117 HVATVFYALNGTDTSTEMQSIAKKMSPR-LSALNDDIYLNAKLFARVKSVYEQRDNLELR 175
Query: 171 GSQEVRVNDEIRSLNVTG 188
Q+ ++D +S V G
Sbjct: 176 VDQKTLLDDSYQSF-VRG 192
>gi|332653496|ref|ZP_08419241.1| beta-lactamase [Ruminococcaceae bacterium D16]
gi|332518642|gb|EGJ48245.1| beta-lactamase [Ruminococcaceae bacterium D16]
Length = 416
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 1 MYRYSFIVLCYSSL--LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + +F+ C L L C + + + PQ P G+S + + +
Sbjct: 1 MMKRTFLPFCVLLLTLLSACAPAPVQSSSDPQQPPAGTSSNTPDSSLNSSETLAPAPRLA 60
Query: 59 K 59
+
Sbjct: 61 Q 61
>gi|332993701|gb|AEF03756.1| outer membrane lipoprotein LolB [Alteromonas sp. SN2]
Length = 206
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 48/158 (30%), Gaps = 4/158 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNR-MPFLGIDFKNSDSTKK 59
M R+ FI++ + + C + +S + + + I F+
Sbjct: 1 MIRFVFILVLVTLFISACTTLPDGPEDAVNLSAQLKKVAQVDAWQLRGKIAFRQEKEGAS 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRID-DQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ LW+ A R N+ + VD+ ++ D+A+ + + + +
Sbjct: 61 ANLLWKTDDADF--HFRLTNLLGVTMVDLNVNGDKAILEAGNEVYEDADPEPLIYHTTGM 118
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
P ++ + L +A
Sbjct: 119 DIPVEPLLSWIKGLPLADDTFTLTEKGLLNTLESNCSA 156
>gi|226312860|ref|YP_002772754.1| hypothetical protein BBR47_32730 [Brevibacillus brevis NBRC
100599]
gi|226095808|dbj|BAH44250.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 231
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M F L +L+ GC + ++ +P + P K +
Sbjct: 4 MMTTLFTCLTAIALVTGCSTGSNQAAPNQPTTPAEKPASKEPANPPGPTGEKKYEKAPA- 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
+ A ++ + ++GDI T+D+ D + N
Sbjct: 63 ---MQIDKAKDYQAKISTSMGDI-TIDLFEKDAPIAVNN 97
>gi|326387053|ref|ZP_08208663.1| RND efflux system, outer membrane lipoprotein, NodT
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208234|gb|EGD59041.1| RND efflux system, outer membrane lipoprotein, NodT
[Novosphingobium nitrogenifigens DSM 19370]
Length = 479
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 50/157 (31%), Gaps = 10/157 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R+ + + L GC+ + + + P P+ ++L + P L D+
Sbjct: 1 MNRFRALTVGTLIALGGCNMAPAYVRPAP---PVPATLPQGESYPVLPQADGAIDAIDAI 57
Query: 61 YSLWRDSHAALFKDSRALNV-GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
W F D+R V D L + + + +L ++
Sbjct: 58 G--WNT----FFTDARLRKVIADALANNRDLRASIANVAVARAQYRGTHAAELPTITAVP 111
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+ + + + G + S A + IA+
Sbjct: 112 SASRYRGSVSSSGYVSGGGGNSPTTSEAYGIAGGIAS 148
>gi|223984723|ref|ZP_03634837.1| hypothetical protein HOLDEFILI_02133 [Holdemania filiformis DSM
12042]
gi|223963310|gb|EEF67708.1| hypothetical protein HOLDEFILI_02133 [Holdemania filiformis DSM
12042]
Length = 1124
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI-----PQMSPMGSSLDENNRMPFLGIDFKNSD 55
M + ++ +L GC S + + P + P+ + + ++
Sbjct: 9 MKKIILGLVISGLILGGCSSKMDQFVEPQGTPRPSIEPLPTDTSFAGEEWYDQMEVWQLH 68
Query: 56 STKKSYSL--WRDSHAALFKDSRALNVGD 82
+L + S AL ++ AL+ D
Sbjct: 69 REPARAALTPYPSSQQALLAETSALDEID 97
>gi|262393800|ref|YP_003285654.1| putative lipoprotein [Vibrio sp. Ex25]
gi|262337394|gb|ACY51189.1| putative lipoprotein [Vibrio sp. Ex25]
Length = 192
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITG---IPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R F+ + L GC S+ +P+ P+ S + ++ P L + S
Sbjct: 1 MKRVFFLSIALFVGLTGCSSAPETKGALYLLPKAEPVTLSSSDISQRPTLVVRPVKLASY 60
Query: 58 KK-SYSLWRDSHAALFKDSRALNVGDI 83
S ++R S + + I
Sbjct: 61 LNDSGIVYRTSETQVIQARNNQWAHSI 87
>gi|332286475|ref|YP_004418386.1| polysaccharide export protein [Pusillimonas sp. T7-7]
gi|330430428|gb|AEC21762.1| polysaccharide export protein [Pusillimonas sp. T7-7]
Length = 372
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 48/177 (27%), Gaps = 13/177 (7%)
Query: 6 FIVLCYSSLLFGCHSSISEITGIPQM--SPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
L + LL C + G + + P
Sbjct: 2 VATLALACLLSACAMAPGMRMGADSQYGNAKEDAAPPGTLTPITPALIAEQRKASPKGV- 60
Query: 64 WRDSHAALFKDSRALNVG--DILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLFG 120
LF +A +G DI+ + + + + RS ++ + G+++
Sbjct: 61 -SKEIKRLFGTRKAYRIGNSDIVNIVVWGHPELGLTPATSNRSMGSTSQADVGNGYNVNP 119
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL-----IAAIVTAILENGNLIISGS 172
T Q G + + ++L+ I V NG + + G
Sbjct: 120 DGTIQFPFIGPIKVAGLTENEARELLTKRLSKYVQDPQITVRV-QAYRNGRIYVDGE 175
>gi|229076180|ref|ZP_04209148.1| Ankyrin repeat domain protein [Bacillus cereus Rock4-18]
gi|229099151|ref|ZP_04230085.1| Ankyrin repeat domain protein [Bacillus cereus Rock3-29]
gi|228684379|gb|EEL38323.1| Ankyrin repeat domain protein [Bacillus cereus Rock3-29]
gi|228707043|gb|EEL59248.1| Ankyrin repeat domain protein [Bacillus cereus Rock4-18]
Length = 226
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 42/157 (26%), Gaps = 11/157 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + ++C L GC + M + E N + K + +
Sbjct: 1 MFKKTLSMICCVIFLQGCSQEQEVKKEMTNMETALLAATEKNETNTVISLLKQGANINAT 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S L A DI T ID A + Q N +G
Sbjct: 61 DS---QGRTPL---MIATYKNDIKTAKALIDAGADVNIQDNIKNN---PFLYAGAEGYLD 111
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
++ + G I +E I I
Sbjct: 112 ILKLTIDAGADPALTNRYGGTALIPASEH--GYITVI 146
>gi|288871496|ref|ZP_06117816.2| putative sugar ABC transporter, substrate-binding protein
[Clostridium hathewayi DSM 13479]
gi|288863238|gb|EFC95536.1| putative sugar ABC transporter, substrate-binding protein
[Clostridium hathewayi DSM 13479]
Length = 468
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 9/163 (5%)
Query: 1 MYRYSFIVLCYSSL----LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M + + + ++ L GC S E T P+ + + P + D
Sbjct: 15 MKKRALSLALAGAMVVTTLAGCGSGSKETTAAPEGT--TAETTAKAEAPADTTAAASGDK 72
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRN---NSLHRKLS 113
T +S+W S ++ V I + D D QT + N +
Sbjct: 73 TTLKWSVWDISSTTYYQPLIDEFEKAHPDVTIEMVDLGSTDYQTVLATELTGNGSDFDVV 132
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
+ G T G L + +++ + L I
Sbjct: 133 TVKDVPGYMTLVNKGVLEPLDSYIADSGVDLAQYKGLTDQITV 175
>gi|117676236|ref|YP_863812.1| copper/silver efflux system outer membrane protein CusC [Shewanella
sp. ANA-3]
gi|117615060|gb|ABK50513.1| RND efflux system, outer membrane lipoprotein, NodT family
[Shewanella sp. ANA-3]
Length = 461
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 47/170 (27%), Gaps = 13/170 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ MP +
Sbjct: 1 MFKLKLLSISTIFILTGCVSLAPEYQRPAAPVPQQFSLSRNSLMPAVNGYQDTGWRNF-- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR----NNSLHRKLSGGF 116
L ++ A N + + +A F N T R N S SGG
Sbjct: 59 --FVDPQVTRLIGEALANNRNLRMAALKVEEARAQF-NVTDADRYPQLNASSGITYSGGL 115
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
T + + L GK R A IL
Sbjct: 116 KGDKPTTQEYDAGLELRYELDFFGKLKNLSDADRQNYFASEEARRAVHIL 165
>gi|114331993|ref|YP_748215.1| surface antigen (D15) [Nitrosomonas eutropha C91]
gi|114309007|gb|ABI60250.1| surface antigen (D15) [Nitrosomonas eutropha C91]
Length = 758
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 7/195 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ F L + GC ++ S + ++ + + DS K S
Sbjct: 1 MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASA 60
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
++ F D + + G++L V ++ A+ ++ + G
Sbjct: 61 AIKALYATGFFSDVKLKSEGELLIVQVQERP-AIAQITINGAKEFDKDKLKEGLKQAGLS 119
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG-NLIISGSQEVRVNDE 180
++ + +L + + + G N I + R+
Sbjct: 120 ESRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERNRIGINFDIKEGKTARIKQ- 178
Query: 181 IRSLNVTG-IVRPQD 194
+N+ G V P+D
Sbjct: 179 ---INIVGNHVFPED 190
>gi|241205578|ref|YP_002976674.1| glycoside hydrolase family 25 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859468|gb|ACS57135.1| glycoside hydrolase family 25 [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 265
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F VL + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVLPLAILLAGCSSSGYDYLETASIKPKTR-FKDTDPQDFGPKHPQQNQVHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + +
Sbjct: 60 ISKWQGDIDWRTVKNSGVAFAFIKATEGKDRVDPRFDEYWREARAAG 106
>gi|90414302|ref|ZP_01222281.1| putative orphan protein [Photobacterium profundum 3TCK]
gi|90324640|gb|EAS41187.1| putative orphan protein [Photobacterium profundum 3TCK]
Length = 211
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 4/114 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + LL GC + +++T P+ + EN+ F S + +
Sbjct: 1 MNKKILSAAVLAVLLTGCATESAQVTQQPE----TNIPSENSSQAMPAWVFNPSSANGFA 56
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
S + D + T+ +D +A +T + +++ +G
Sbjct: 57 ASNCVTASGNFSVDRNHVVSLTRNTLAQNMDLKANVLEKTYQKMDSAAGVSTTG 110
>gi|158313814|ref|YP_001506322.1| glycosyl hydrolase 53 protein [Frankia sp. EAN1pec]
gi|158109219|gb|ABW11416.1| glycosyl hydrolase 53 domain protein [Frankia sp. EAN1pec]
Length = 399
Score = 38.5 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 17/60 (28%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L L GC + I G + S P G S+ +
Sbjct: 46 MLRLLSMALLAMVALAGCVTPIGGGGGPAPTTSAAPSPAGPTGSPSAGPTQAPDPSSVPN 105
>gi|320335740|ref|YP_004172451.1| hypothetical protein Deima_3158 [Deinococcus maricopensis DSM
21211]
gi|319757029|gb|ADV68786.1| hypothetical protein Deima_3158 [Deinococcus maricopensis DSM
21211]
Length = 726
Score = 38.5 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++LL C + + M + D + S
Sbjct: 1 MKHLTLAAVTLTALLSACSTQTAPTPTKATAGTMTAPKD-LAPAQYRAPVRNAMMPAPAS 59
Query: 61 YSLWRDSHAALFKDS 75
S WR L +
Sbjct: 60 PSAWRGMTWRLLDEQ 74
>gi|159898434|ref|YP_001544681.1| hypothetical protein Haur_1910 [Herpetosiphon aurantiacus ATCC
23779]
gi|159891473|gb|ABX04553.1| hypothetical protein Haur_1910 [Herpetosiphon aurantiacus ATCC
23779]
Length = 164
Score = 38.5 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 45/149 (30%), Gaps = 16/149 (10%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQM-----SPMGSSLDENNRMPFLGIDFKNSDSTK 58
+F+V LL GC T P + +P + + + + +
Sbjct: 2 RTFVVYLLFCLLVGCGQPDQVATTQPTLGLILSNPTATPVAISPSAAPASGAINPTQAVA 61
Query: 59 KSYSL----WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSG 114
+ S+ W+ + A +++R + + +++ S N + G
Sbjct: 62 STPSISADDWQSQYRAWIEEARQTHPY-------SESSEVMWNVMICESSGNPTIQGPGG 114
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGS 143
LF Q G N + +
Sbjct: 115 LTGLFQYQPSTWAGTWNPYRDQPITDARA 143
>gi|329927348|ref|ZP_08281607.1| lactose-binding protein [Paenibacillus sp. HGF5]
gi|328938487|gb|EGG34872.1| lactose-binding protein [Paenibacillus sp. HGF5]
Length = 436
Score = 38.5 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 12/115 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++L LL C S E + + D
Sbjct: 1 MKKLMSLLLAGVVLLSACSSGGKEGGTDSNGNSGNEGSTGTKEITVWAWDPA-------- 52
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ + + K++ A D +T+++ + QA + N+ + L
Sbjct: 53 ---FNIAAMNVAKEAYAQVNPD-VTINVVENAQADIVQKLNTGLNSGSTKGLPNI 103
>gi|83748070|ref|ZP_00945099.1| probable transmembrane lipoprotein [Ralstonia solanacearum UW551]
gi|83725256|gb|EAP72405.1| probable transmembrane lipoprotein [Ralstonia solanacearum UW551]
Length = 245
Score = 38.5 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 40/159 (25%), Gaps = 6/159 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S + L +LL C + + + ++ +N P T
Sbjct: 1 MLRPSLLCLGVVALLAACSNLQTPAPDDTAQANASTASPTSNASPATPAQPTLPLGTPDG 60
Query: 61 YS-----LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
L +L + RA ++ + D A S +
Sbjct: 61 NGNMTINLPPKDKMSL-SEYRAQTRDRLIQSEHARPDVADCAAHASWIVPRSTNFDQFRL 119
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + + G +S N +
Sbjct: 120 PTGALSEGQAKVEPWDSRFSQSKQGAIKVSSVVSFNAAV 158
>gi|238753663|ref|ZP_04615025.1| hypothetical protein yruck0001_13960 [Yersinia ruckeri ATCC 29473]
gi|238708215|gb|EEQ00571.1| hypothetical protein yruck0001_13960 [Yersinia ruckeri ATCC 29473]
Length = 154
Score = 38.5 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 38/158 (24%), Gaps = 28/158 (17%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R F + S +L GC S + + P + + +
Sbjct: 1 MRMRFWIFLASLILAGCSSR-------------APAPSGHLSDPIVVVAQLKEQLRQWQG 47
Query: 62 SLWRDSHAALFKDSRA--------LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL- 112
+ ++ D R D V + A T SR+ + L
Sbjct: 48 TPYQYGGL----DQRGVDCSGFVYRTFRDRFDVQLPRTTAAQTSLGTQVSRDELMPGDLV 103
Query: 113 --SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAE 148
G G + N + S G S
Sbjct: 104 FFKTGSGENGLHVGIYDTNDEFIHASTSKGVIRSSLEN 141
>gi|59711303|ref|YP_204079.1| accessory colonization factor AcfD-like protein, inner membrane
lipoprotein [Vibrio fischeri ES114]
gi|59479404|gb|AAW85191.1| accessory colonization factor AcfD-like protein, predicted inner
membrane lipoprotein [Vibrio fischeri ES114]
Length = 1569
Score = 38.5 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 44/185 (23%), Gaps = 30/185 (16%)
Query: 1 MYRYSFIVLCYSSLLFGC---------HSSISEITGIPQMSPMGSSLDENNRMPFLGIDF 51
M + + LL GC + ++ +I G ++P + D +
Sbjct: 1 MNKKLLLASLIPMLLAGCNQEEININGNGTVPDIGGDGGVTPPKPTPDPIKYRFMITSSG 60
Query: 52 KNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ L D L V D +
Sbjct: 61 APIEGATCDGRL-----------------SDHLGVIALDYDSNTLPQSIDCLIAGTPLAT 103
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
+ + + N ++ G ++ L + NG + G
Sbjct: 104 FATSTNKRVRAQ-DYNLDIADGKISDLQGDQLVNIQSLLR---TVDADGVDSNGYQFVEG 159
Query: 172 SQEVR 176
+ V+
Sbjct: 160 EKSVK 164
>gi|218700078|ref|YP_002407707.1| putative cell adhesion autotransported outer membrane protein
[Escherichia coli IAI39]
gi|218370064|emb|CAR17840.1| putative autotransported outer membrane protein involved in cell
adhesion [Escherichia coli IAI39]
Length = 1959
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 24/153 (15%)
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ I A D+ + N L+ + + + G S +
Sbjct: 270 IYITKTVGATVDDPANSNVFNLSDAVLTDQGGNAARNGATVIEINGSRIVLNNDGDISAT 329
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL---------------NVTG-- 188
+ + + + + NG++++ G VN + L VTG
Sbjct: 330 GKDSVVVAMTGNDITVNNNGHMVVDGGTAGVVNGDRAILNNRGDAVITNGGAGVIVTGDN 389
Query: 189 -IVR---PQDVDAHNSVSYDKIA-EA-RISYGG 215
++ D+D NSV K+A A RI G
Sbjct: 390 AVINNTGQSDIDGDNSV-SVKVAGNATRIKMEG 421
>gi|170695475|ref|ZP_02886620.1| conserved hypothetical lipoprotein [Burkholderia graminis C4D1M]
gi|170139666|gb|EDT07849.1| conserved hypothetical lipoprotein [Burkholderia graminis C4D1M]
Length = 55
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M+R S I L ++ + GC S P P + P + +
Sbjct: 1 MFRVSMIALLLAAGVAGCADGPSAHHAGPPQDPADYHGVPTDTHPPAMVPAPVA 54
>gi|16764626|ref|NP_460241.1| hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62179856|ref|YP_216273.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|167552393|ref|ZP_02346146.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167991919|ref|ZP_02573018.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168233170|ref|ZP_02658228.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168238932|ref|ZP_02663990.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244371|ref|ZP_02669303.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168264193|ref|ZP_02686166.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|194446266|ref|YP_002040530.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194447950|ref|YP_002045280.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469569|ref|ZP_03075553.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194735682|ref|YP_002114291.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248100|ref|YP_002146766.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263552|ref|ZP_03163626.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|200390096|ref|ZP_03216707.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204927472|ref|ZP_03218673.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|238910909|ref|ZP_04654746.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|16419791|gb|AAL20200.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62127489|gb|AAX65192.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194404929|gb|ACF65151.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406254|gb|ACF66473.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455933|gb|EDX44772.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194711184|gb|ACF90405.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197211803|gb|ACH49200.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197241807|gb|EDY24427.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197288268|gb|EDY27653.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|199602541|gb|EDZ01087.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204322814|gb|EDZ08010.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205322958|gb|EDZ10797.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205329695|gb|EDZ16459.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205332655|gb|EDZ19419.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205336720|gb|EDZ23484.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205347297|gb|EDZ33928.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|261246484|emb|CBG24294.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267993136|gb|ACY88021.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301157812|emb|CBW17306.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912260|dbj|BAJ36234.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223899|gb|EFX48962.1| Putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322616662|gb|EFY13571.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619823|gb|EFY16697.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322622391|gb|EFY19236.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627915|gb|EFY24705.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632987|gb|EFY29730.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636767|gb|EFY33470.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322641422|gb|EFY38061.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645197|gb|EFY41726.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650138|gb|EFY46552.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655712|gb|EFY52014.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660036|gb|EFY56275.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665396|gb|EFY61584.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669617|gb|EFY65764.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673580|gb|EFY69682.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677506|gb|EFY73570.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322679829|gb|EFY75868.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687302|gb|EFY83274.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322714321|gb|EFZ05892.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323129545|gb|ADX16975.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323192419|gb|EFZ77649.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323199496|gb|EFZ84589.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203684|gb|EFZ88706.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323208772|gb|EFZ93710.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211072|gb|EFZ95927.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217748|gb|EGA02463.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219935|gb|EGA04410.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323225278|gb|EGA09513.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323229551|gb|EGA13674.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323232774|gb|EGA16870.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240188|gb|EGA24232.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323242825|gb|EGA26846.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249141|gb|EGA33060.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254358|gb|EGA38175.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323256137|gb|EGA39874.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323259459|gb|EGA43095.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323267055|gb|EGA50540.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323272159|gb|EGA55573.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|332988163|gb|AEF07146.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 83
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++++I L LL C SS P++ + + + + +
Sbjct: 1 MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRS 58
>gi|16760617|ref|NP_456234.1| hypothetical protein STY1843 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141624|ref|NP_804966.1| hypothetical protein t1155 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|168463339|ref|ZP_02697270.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|198244944|ref|YP_002215861.1| hypothetical protein SeD_A2083 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205352998|ref|YP_002226799.1| hypothetical protein SG1848 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857223|ref|YP_002243874.1| hypothetical protein SEN1776 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213161192|ref|ZP_03346902.1| hypothetical protein Salmoneentericaenterica_14615 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213427962|ref|ZP_03360712.1| hypothetical protein SentesTyphi_21700 [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213609140|ref|ZP_03368966.1| hypothetical protein SentesTyp_00778 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646203|ref|ZP_03376256.1| hypothetical protein SentesTy_01920 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850189|ref|ZP_03381087.1| hypothetical protein SentesT_00793 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289806740|ref|ZP_06537369.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
gi|289825233|ref|ZP_06544526.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25512483|pir||AE0713 conserved hypothetical protein STY1843 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502913|emb|CAD02078.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137252|gb|AAO68815.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|195633842|gb|EDX52194.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197939460|gb|ACH76793.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205272779|emb|CAR37701.1| exported protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206709026|emb|CAR33357.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326623610|gb|EGE29955.1| Uncharacterized protein yoaF [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326628075|gb|EGE34418.1| hypothetical protein SG9_1874 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 83
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++++I L LL C SS P++ + + + + +
Sbjct: 1 MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRS 58
>gi|148657736|ref|YP_001277941.1| hypothetical protein RoseRS_3636 [Roseiflexus sp. RS-1]
gi|148569846|gb|ABQ91991.1| hypothetical protein RoseRS_3636 [Roseiflexus sp. RS-1]
Length = 595
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 23/81 (28%), Gaps = 11/81 (13%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R I+ + G ++ T +PQ +P+ + L
Sbjct: 1 MKRVLTIIFLIFLIACGQPAASPPPTSVPQRTPIVRPMTPPADPGRLAPRATPPP----- 55
Query: 61 YSLWRDSHAALFKDSRALNVG 81
S A L + RA
Sbjct: 56 ------SAAPLLAERRAQVEQ 70
>gi|254784961|ref|YP_003072389.1| alpha-2-macroglobulin domain-containing protein [Teredinibacter
turnerae T7901]
gi|237685469|gb|ACR12733.1| alpha-2-macroglobulin domain protein [Teredinibacter turnerae
T7901]
Length = 1675
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCH----SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M R++ ++ +L C ++ S + +PQ + + + DE P +++
Sbjct: 1 MSRFTPLLFSLMCVLVACSPDTGTNPSTPSPVPQSADLAIAHDEPPASPEPVAANPMAEA 60
Query: 57 TKKSYSLWRDSHAAL 71
+ S+ D AL
Sbjct: 61 PAPAESMPGDQSTAL 75
>gi|226313455|ref|YP_002773349.1| hypothetical protein BBR47_38680 [Brevibacillus brevis NBRC
100599]
gi|226096403|dbj|BAH44845.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 418
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 1 MYR---YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R ++ +++ + L GC + +++ Q + E +
Sbjct: 1 MKRTWKWALLLVIACTSLVGCAAPVAQADKTSQAPNVKVPDPETPPQTATNQQETQPPTL 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILT 85
S + + +L VGDI+
Sbjct: 61 P---SRFPEQRISLLA------VGDIMM 79
>gi|190892605|ref|YP_001979147.1| glycoside hydrolase [Rhizobium etli CIAT 652]
gi|190697884|gb|ACE91969.1| glycoside hydrolase protein [Rhizobium etli CIAT 652]
Length = 265
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F V+ + LL GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVVPLAILLAGCSSSGHDYLETASIRPKTR-FQDTDPQDFGPKHPQQNAIHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + + +
Sbjct: 60 ISKWQGDIDWATVRNSGVAFAFIKATEGKDRVDPRFDEYWREARNAG 106
>gi|170733662|ref|YP_001765609.1| hypothetical protein Bcenmc03_2326 [Burkholderia cenocepacia
MC0-3]
gi|169816904|gb|ACA91487.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 321
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
F++L ++LL GC + P + ++E P ++
Sbjct: 19 VFLILAVAALLSGCGLLPVQNPPAPISEALVEPVEETAGEPLTMPPMPAPTQPEEP 74
>gi|68536721|ref|YP_251426.1| lipoprotein LpqB [Corynebacterium jeikeium K411]
gi|123734534|sp|Q4JTP9|LPQB_CORJK RecName: Full=Lipoprotein lpqB; Flags: Precursor
gi|68264320|emb|CAI37808.1| putative lipoprotein [Corynebacterium jeikeium K411]
Length = 583
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 66/236 (27%), Gaps = 27/236 (11%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL- 63
V+ LL GC + + S + + P G + S
Sbjct: 17 VLSVVAGLGLLAGCSTLPDDTNPEAISSYAPAPSGQEAPTPTDGQPSDLLLRDFFTASAH 76
Query: 64 ----WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + L + D T+ + D + + + G +
Sbjct: 77 PLRDHQAAKKFLTGGMQGRWQSDAPTMVLDRIDISSEGPGNDSKITYRVRGNIVGTLGVG 136
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSI---------SRAEKLNLLIAAIVTAILENGNLIIS 170
G PQ G+ I R + ++ A + NG ++S
Sbjct: 137 GVFDPQYTAFETSYEMQNVDGQWRISNLPNVVVLDRQDFVSTYRARNIYFPDLNGRALVS 196
Query: 171 GSQEVRVNDEIR-----SLNVTGIVRPQD---VDAHNSVSYDKIAEARISYGGKGR 218
+ + + SL V G PQD N V D A A++S G G
Sbjct: 197 DRRWIYTGQQSTAASLVSLLVAG---PQDRLKKAVRNLVPED--ATAQVSNDGGGD 247
>gi|138893927|ref|YP_001124380.1| hypothetical protein GTNG_0251 [Geobacillus thermodenitrificans
NG80-2]
gi|196250522|ref|ZP_03149213.1| conserved hypothetical protein [Geobacillus sp. G11MC16]
gi|134265440|gb|ABO65635.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210012|gb|EDY04780.1| conserved hypothetical protein [Geobacillus sp. G11MC16]
Length = 339
Score = 38.2 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 27/94 (28%), Gaps = 20/94 (21%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ + F++ C LL GC + P S ++ + P
Sbjct: 4 LKHWLFVISCAVLLLGGCTAKSEPKPTEPA----KPSPEQPSESPAEEKQMFPLTGLPTE 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQA 94
+ D R +++V I +A
Sbjct: 60 GDI----------DQR------VVSVMINNHPKA 77
>gi|299066385|emb|CBJ37570.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 252
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 39/161 (24%), Gaps = 8/161 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R S + L +LL C + + S P + S G +
Sbjct: 2 MLRPSLLCLGIVALLAACSNLQNPSPEDTAPATASTASPTSNPTPAQPTGTAPALAIGAP 61
Query: 59 KSYS-----LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
L +L + RA ++ + D A S +
Sbjct: 62 DGNGNTTINLPPKDKMSL-SEYRAQTRDHLIQSEHARPDVADCAAHASWIVPRSTNFDQF 120
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + + G +S N +
Sbjct: 121 RLPTGALSEGQAKVEPWDSRFSQSKQGAIKVSSVVSFNAAV 161
>gi|146311275|ref|YP_001176349.1| hypothetical protein Ent638_1619 [Enterobacter sp. 638]
gi|145318151|gb|ABP60298.1| protein of unknown function DUF1425 [Enterobacter sp. 638]
Length = 124
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 24/76 (31%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R VL + +L GC S + Q M SS+ + S
Sbjct: 1 MQRGRIAVLALAIVLAGCSSRPAIPVSDEQTLVMESSVLAAGITAESPSLTLSEIQPSAS 60
Query: 61 YSLWRDSHAALFKDSR 76
+L+ + + R
Sbjct: 61 STLYNERREPVTIHYR 76
>gi|254448388|ref|ZP_05061849.1| alkaline phosphatase [gamma proteobacterium HTCC5015]
gi|198262001|gb|EDY86285.1| alkaline phosphatase [gamma proteobacterium HTCC5015]
Length = 649
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 16/189 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L S+ L C S +I P MS + + +S
Sbjct: 3 MKKLLALSLVSSAFLAACADSDQDI---PGMSGVQPEPQPDTEDKKSVTISLEQIGRYES 59
Query: 61 YSLWRDSHAALFKD----SRALNVG-DILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++ D A + RA + + TVD+ + G + + GG
Sbjct: 60 D-IFDDGGAEIVSYDKTSQRAFVINAEDATVDVLNLSDPSKPAKLGTIDDTDITAISVGG 118
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI---ISGS 172
F+ + + + D A G + A L I + L + L+ SG
Sbjct: 119 FNSVSVHSGLVAVAVENDDKQA-KGHVAFYNASDL-GFITSFEVGALPD--LVTFNRSGD 174
Query: 173 QEVRVNDEI 181
+ N+
Sbjct: 175 TVLVANEGE 183
>gi|56413738|ref|YP_150813.1| hypothetical protein SPA1569 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362660|ref|YP_002142297.1| hypothetical protein SSPA1458 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56127995|gb|AAV77501.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197094137|emb|CAR59638.1| conserved hypothetical protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 83
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++++I L LL C SS P++ + + + + +
Sbjct: 1 MKFTWIALPGVLLLSACSSSQPNAPKPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRS 58
>gi|326795578|ref|YP_004313398.1| cytochrome-c peroxidase [Marinomonas mediterranea MMB-1]
gi|326546342|gb|ADZ91562.1| Cytochrome-c peroxidase [Marinomonas mediterranea MMB-1]
Length = 405
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
MYR L S+LL GC S +++++ P+ + + + +P
Sbjct: 1 MYRLLISSLALSALLVGCGSDVNQVSQT-NHKPVKAPPVKRSDLPVP 46
>gi|332283401|ref|YP_004415312.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7]
gi|330427354|gb|AEC18688.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7]
Length = 489
Score = 38.2 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 40/157 (25%), Gaps = 2/157 (1%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQM--SPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
F L + LL GC + + +SL + ++ + + +
Sbjct: 7 LRFTSLAMALLLAGCAVGPDYQRPDVDVPNAFKEASLSPEAAKQWKMAQPADALARGRWW 66
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
+++ D +D D+ R+ SL
Sbjct: 67 AIFNDPILDGLEDQAMSANQDLKVAAARVKQARALRQNAEAGLLPSLDAGFGPTRQRQSS 126
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIV 158
+ + + IS L IA+ V
Sbjct: 127 AAQGLPEDTGSSAQTLWRAQAGISYEADLFGRIASDV 163
>gi|330818161|ref|YP_004361866.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
gladioli BSR3]
gi|327370554|gb|AEA61910.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
gladioli BSR3]
Length = 508
Score = 38.2 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 37/155 (23%), Gaps = 10/155 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++ + GC + +S S P +
Sbjct: 3 MRKLVLTAMAFALVATGCTMAPHYQRPAAPVSGSFPSDGVYATQPGADGAHSANGQAAAD 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
F D R + ++ + ++ + + +G F
Sbjct: 63 I-----GWRNFFADPR---LQALIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLD 114
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
L +G I+R + L +
Sbjct: 115 GTGTGNTQRLPAGVST--TGSPLITRTYNVGLSAS 147
>gi|262368868|ref|ZP_06062197.1| curli production assembly/transport component CsgG [Acinetobacter
johnsonii SH046]
gi|262316546|gb|EEY97584.1| curli production assembly/transport component CsgG [Acinetobacter
johnsonii SH046]
Length = 223
Score = 38.2 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 51/150 (34%), Gaps = 6/150 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSS-ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + F+ + L C ++ S+ PQ++ +++ + + ++ S+
Sbjct: 1 MNKSIFLAVLSGLALSACSTTETSKTIQSPQVTAAVATVKYAGTKTPVSVGKFDNRSSYM 60
Query: 60 SYSLWRDSHAALFKDSR----ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++ D+ L ++ + D+ A + G ++++ +
Sbjct: 61 RG-IFSDNVDRLGGQAKTILETHLQQSGYFSVLNRDNLAELKQEAGFTKSSQSIKGARYV 119
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ + + + G GK I+
Sbjct: 120 LTGDVSEFGRKEVGDHQLFGILGRGKTQIA 149
>gi|33596389|ref|NP_884032.1| putative efflux system outer membrane component [Bordetella
parapertussis 12822]
gi|33602322|ref|NP_889882.1| putative efflux system outer membrane component [Bordetella
bronchiseptica RB50]
gi|33566158|emb|CAE37062.1| putative efflux system outer membrane component [Bordetella
parapertussis]
gi|33576761|emb|CAE33839.1| putative efflux system outer membrane component [Bordetella
bronchiseptica RB50]
Length = 499
Score = 38.2 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 56/201 (27%), Gaps = 16/201 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS---PMGSSLDENNRMPFLGIDFKNSDST 57
MY+ S + + ++ L GC + + P + + + + +
Sbjct: 5 MYKRSALSVLVAAALAGCSLAPDYKRPEAPVQANWPDQPKVQYGAYASPTSLGEQPAAAV 64
Query: 58 KKSYSLWRD--SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ D F+D+R + +++ + + R + G
Sbjct: 65 APQGATPADEIGWREFFRDARLQKL-----IELALVNNRDLRVAVQRVEEARAQYGVQRG 119
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG---NLIISGS 172
+ G S S + + + I G NL +
Sbjct: 120 AQWPSIGAGIQGQRQHLPPDMRPLGPDSTSISSQYQAGLGLTTFEIDLFGRLRNLSEAAY 179
Query: 173 QEVRVNDEIR---SLNVTGIV 190
Q+ ++ + + + G V
Sbjct: 180 QQYLSTEQAQRSVHITLVGAV 200
>gi|89896958|ref|YP_520445.1| hypothetical protein DSY4212 [Desulfitobacterium hafniense Y51]
gi|219667185|ref|YP_002457620.1| hypothetical protein Dhaf_1124 [Desulfitobacterium hafniense
DCB-2]
gi|89336406|dbj|BAE86001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537445|gb|ACL19184.1| hypothetical protein Dhaf_1124 [Desulfitobacterium hafniense
DCB-2]
Length = 211
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS--SLDENNRMPFLGIDFKNSDSTK 58
M++ I+L LL GC + + P + G + T+
Sbjct: 1 MFKRFLIILASVLLLAGCAAKTPQDQNADLDKPGQQVGTDLPVGDQGQTGPGVGQGNETE 60
Query: 59 KSYSL 63
+S SL
Sbjct: 61 QSASL 65
>gi|146291369|ref|YP_001181793.1| copper/silver efflux system outer membrane protein CusC [Shewanella
putrefaciens CN-32]
gi|145563059|gb|ABP73994.1| RND efflux system, outer membrane lipoprotein, NodT family
[Shewanella putrefaciens CN-32]
Length = 461
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 46/170 (27%), Gaps = 13/170 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M++ + + +L GC S E P SL N+ P +
Sbjct: 1 MFKLKLLSISTIFILTGCVSLAPEYQRPAAPVPQQFSLSRNSLTPAVNGYQDTGWRNF-- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR----NNSLHRKLSGGF 116
L ++ A N + + +A F N T R N S SGG
Sbjct: 59 --FVDPQVTRLIGEALANNRNLRMAALKVEEARAQF-NVTDADRYPQLNASSGITYSGGL 115
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGK----GSISRAEKLNLLIAAIVTAIL 162
T + + L GK R A IL
Sbjct: 116 KGDKPTTQEYDAGLELRYELDFFGKLKNLSDADRQNYFASEEARRAVHIL 165
>gi|91226895|ref|ZP_01261492.1| hypothetical protein V12G01_15962 [Vibrio alginolyticus 12G01]
gi|91188858|gb|EAS75143.1| hypothetical protein V12G01_15962 [Vibrio alginolyticus 12G01]
Length = 192
Score = 38.2 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI---PQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R F+ + L GC S+ + P+ P+ S + + P L + S
Sbjct: 1 MKRVFFLSIALFVGLTGCSSAPQTKGAMYLLPKAEPVTLSSSDIAQRPTLVVRPVTLASY 60
Query: 58 KK-SYSLWRDSHA 69
+ ++R S
Sbjct: 61 LNDNGIVYRTSET 73
>gi|114928|sp|P22236|BEXD_HAEIN RecName: Full=Capsule polysaccharide export protein BexD; Flags:
Precursor
gi|45296|emb|CAA38730.1| BexD [Haemophilus influenzae]
Length = 394
Score = 38.2 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 12/176 (6%)
Query: 1 MYRYSFIVLCYSSLL--FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M Y +C +L C S + + + D + + + N +
Sbjct: 1 MRNYPLKAVCAVLMLGLSACSSLPTSGPTDSAVLEINQGADASELAAKVNVIELNESLVQ 60
Query: 59 KSYSLWRDSHAALFKDSR-------ALNVGDILTVDIRIDDQAVF---DNQTGRSRNNSL 108
+ Y+ + + F D R A+NVGD+L + I AV + + +
Sbjct: 61 QIYAAQQSQRFSGFADVRGNGGYAGAVNVGDVLEISIWEAPPAVLFGTTFSSEGQGSGHV 120
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ S + G T GN++ G + + I + V I N
Sbjct: 121 TQLPSQIVNKNGTVTVPFVGNISVAGKTPEAIQAQIVASLSRKANQPQAVVKIANN 176
>gi|153809493|ref|ZP_01962161.1| hypothetical protein BACCAC_03811 [Bacteroides caccae ATCC 43185]
gi|149127874|gb|EDM19097.1| hypothetical protein BACCAC_03811 [Bacteroides caccae ATCC 43185]
Length = 1086
Score = 38.2 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 58/201 (28%), Gaps = 18/201 (8%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGI-----PQMSPMGSSLDENNRMPFLGIDF 51
M RY +L L C P + N +
Sbjct: 1 MKRYKLKITYFILLLLPLFASCTDEEIFQGSGVTEGVPTTVDISVGTAANTAKTRSALLE 60
Query: 52 KNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQ-----AVFDNQTGRSRNN 106
Y LW + + + SR + D++ + A G +N
Sbjct: 61 SEERKIYNLY-LWVFNSSGNVECSREYSRADLIQAATDLTTSTGEVDADAPTSMGLLKNI 119
Query: 107 SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166
SL F L L + +G S EK+ + T NGN
Sbjct: 120 SLTTGKKTLFLLAN--YKSDADGLFHVEPEVLNGISKYSDLEKVRAAMTVH-TLFRPNGN 176
Query: 167 LIISGSQEVRVNDEIRSLNVT 187
L++S +Q V V+ + + V+
Sbjct: 177 LLMSLTQTVTVSTATKQIEVS 197
>gi|218682974|ref|ZP_03530575.1| glycoside hydrolase protein [Rhizobium etli CIAT 894]
Length = 265
Score = 38.2 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F VL + +L GC SS + + P + + F + +
Sbjct: 1 MRRLLFCVLPLAIMLAGCSSSGHDYLETASIKPKTR-FQDTDPQDFGPKHPQQNAIHGID 59
Query: 61 YSLWRD--------SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQ 99
S W+ + F +A D + +
Sbjct: 60 ISKWQGDIDWATVRNSGVGFAFIKATEGKDRVDPRFDEYWREARAAG 106
>gi|311109428|ref|YP_003982281.1| hypothetical protein AXYL_06273 [Achromobacter xylosoxidans A8]
gi|310764117|gb|ADP19566.1| hypothetical protein AXYL_06273 [Achromobacter xylosoxidans A8]
Length = 200
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 5/100 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + VL + L GC ++ + + + + F+ S
Sbjct: 1 MMKMRSAVLILTLALAGCGIGRVAAPPSVFDLGLDSRPAPALPARETIALVFQAVPSLSD 60
Query: 60 SYSLWRDSHAA---LFKDSR-ALNVGDILTVDIRIDDQAV 95
+ +WR +A + R A D++ +
Sbjct: 61 TGVIWRVGDSAAPKAYASYRWASPPADLVRQRLTERLSRQ 100
>gi|320162324|ref|YP_004175549.1| hypothetical protein ANT_29230 [Anaerolinea thermophila UNI-1]
gi|319996178|dbj|BAJ64949.1| hypothetical protein ANT_29230 [Anaerolinea thermophila UNI-1]
Length = 224
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 16/66 (24%), Gaps = 8/66 (12%)
Query: 2 YRYSFIVLCYSSLLFGCH--------SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
R + +L C + + PQ++P + P +
Sbjct: 1 MRRVVLFFALMLMLTACSGFPLPGAPAQPAPTNPPPQIAPTATPQVVRTLPPLITPTQPQ 60
Query: 54 SDSTKK 59
S
Sbjct: 61 SPEAAT 66
>gi|281421000|ref|ZP_06251999.1| subtilase family protein [Prevotella copri DSM 18205]
gi|281404918|gb|EFB35598.1| subtilase family protein [Prevotella copri DSM 18205]
Length = 695
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 43/150 (28%), Gaps = 1/150 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + F + + L GC S+S I S + D + + SD ++
Sbjct: 1 MKKKFFYIAMVALALTGCSDSLSTIGSSDGNSEITIPADAEAGELLIKFSPEMSDILDQA 60
Query: 61 Y-SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S R A V DIL V N R+R LH + F+
Sbjct: 61 QLSKTRAGKATRSGIPSTDEVLDILGSYSFERVFPVDANTEARTREAGLHLWYTVKFNKG 120
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
+ G I RA
Sbjct: 121 TDLKAAADRLKQLGEISKVQTNGRIKRAYN 150
>gi|239617832|ref|YP_002941154.1| glycoside hydrolase family 57 [Kosmotoga olearia TBF 19.5.1]
gi|239506663|gb|ACR80150.1| glycoside hydrolase family 57 [Kosmotoga olearia TBF 19.5.1]
Length = 1354
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Query: 1 MYRYSFI-VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M ++ ++ +L + +L C + +P SP G++L N +
Sbjct: 1 MKKFLWVGLLIFILVLSACSVQEKGVVKVPGPSPKGTTLVTFNVTLPDNTPASDRIYLAG 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRID 91
+++ W S + ++ + I ++
Sbjct: 61 NFNGWDPSSPKFIMERTGNTAVLVVEMPIGME 92
>gi|163848380|ref|YP_001636424.1| peptidase C60 sortase A and B [Chloroflexus aurantiacus J-10-fl]
gi|222526304|ref|YP_002570775.1| peptidase C60 sortase A and B [Chloroflexus sp. Y-400-fl]
gi|163669669|gb|ABY36035.1| peptidase C60 sortase A and B [Chloroflexus aurantiacus J-10-fl]
gi|222450183|gb|ACM54449.1| peptidase C60 sortase A and B [Chloroflexus sp. Y-400-fl]
Length = 237
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Query: 2 YRYSFIVLCYSSLLFGC-----HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
R IVL LL C +++ T ++P L + P + +
Sbjct: 1 MRVLLIVLTGCLLLSACGETTASATVPSPTPAASITPTAEQLSSLSPQPSPTPSATPTQA 60
Query: 57 TKKSY 61
+
Sbjct: 61 PTATA 65
>gi|89902190|ref|YP_524661.1| cell division protein FtsA [Rhodoferax ferrireducens T118]
gi|89346927|gb|ABD71130.1| cell division protein FtsA [Rhodoferax ferrireducens T118]
Length = 409
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 19/75 (25%)
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDK----- 205
+ +V +L NG L ++G N R G+V V+ +V +
Sbjct: 16 TAKVMVVVAEVLPNGALKLAGLGVAPSNGLKR-----GVV----VNIDATVQSIQQALKE 66
Query: 206 ---IAEARIS--YGG 215
+A+ +I+ Y G
Sbjct: 67 AELMADCKITRVYTG 81
>gi|323526808|ref|YP_004228961.1| hypothetical protein BC1001_2485 [Burkholderia sp. CCGE1001]
gi|323383810|gb|ADX55901.1| hypothetical protein BC1001_2485 [Burkholderia sp. CCGE1001]
Length = 55
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 19/54 (35%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M+R S I L ++ + GC + S P P + P + +
Sbjct: 1 MFRVSMIALLLAASVAGCTNGPSGRRAGPPQDPADYHGVPTDTHPPAMVPAPVA 54
>gi|126179389|ref|YP_001047354.1| hypothetical protein Memar_1443 [Methanoculleus marisnigri JR1]
gi|125862183|gb|ABN57372.1| hypothetical protein Memar_1443 [Methanoculleus marisnigri JR1]
Length = 361
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 54/167 (32%), Gaps = 10/167 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +++ + + +L G S+ PQ +G L G+ + +
Sbjct: 1 MKRIAWLTIIVAMMLVGTASAAYVSISAPQTVNVGDPLKVTGTTIVGGLPKPTVNPGFST 60
Query: 61 YS-LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK-LSGGFSL 118
L+R + K A T+ ++ D +T + + S
Sbjct: 61 EIVLYRAQYM---KHEIARK-----TIVVQEDGSFSTTFETDGLEPGQYSIELIDPTLST 112
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165
FG + + D G+ + +++ L + + + + G
Sbjct: 113 FGGSSTKQRTVTLVDRSGSITIDSPLNQDFDGTLDLRGKIVDLGDAG 159
>gi|295677122|ref|YP_003605646.1| conserved hypothetical lipoprotein [Burkholderia sp. CCGE1002]
gi|295436965|gb|ADG16135.1| conserved hypothetical lipoprotein [Burkholderia sp. CCGE1002]
Length = 55
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M R + L + + GC + S G P P + P + +
Sbjct: 1 MTRVLTVALLLCAGVAGCADNPSAHRGSPPHDPADYHGVPTDDRPPAMVPAPVA 54
>gi|254262149|emb|CAZ90478.1| hypothetical protein [Enterobacter turicensis]
Length = 262
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIP-QMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ S +VL + L GC + P ++ G+ + G S ++
Sbjct: 1 MKLSPLVLLATVALAGCQT-----GRSPSNVTAPGAPTTTKTQALETGATVLQSRPPVEA 55
Query: 61 YSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVF-DNQTGRSR 104
S W D D + +T+ QAV D T ++
Sbjct: 56 ISAWLDGFHFYNGDRNGQMEAHHYVTILNEDVMQAVIYDGNTKDAK 101
>gi|37676733|ref|NP_937129.1| putative protein F-related protein [Vibrio vulnificus YJ016]
gi|37201276|dbj|BAC97099.1| putative protein F-related protein [Vibrio vulnificus YJ016]
Length = 193
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 42/151 (27%), Gaps = 7/151 (4%)
Query: 9 LCYSSLLFGCHS-----SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ LL GC + ++ ++ + P + +S SL
Sbjct: 1 MFACVLLSGCANLIVPPNMLDVAPKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSL 60
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+ + GD + + + + + L +
Sbjct: 61 QSFLQRNAIQYQ--ILPGDHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLNQRSDVD 118
Query: 124 PQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
++G+ + G + S RAE++ +
Sbjct: 119 IVIDGHADSTGTTGFNNSLSERRAEEVKKQL 149
>gi|253576971|ref|ZP_04854294.1| extracellular solute-binding protein, family 1 [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251843581|gb|EES71606.1| extracellular solute-binding protein, family 1 [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 449
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 45/171 (26%), Gaps = 19/171 (11%)
Query: 1 MYR-----YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M R + + LL GC + ++ + +
Sbjct: 3 MRRKKVFGITLAAVLLMGLLAGCSGNNGNSGKA-------NTTEPQTNNSASVSNETGDK 55
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
++LW A ++ D V I D D T S LSGG
Sbjct: 56 PVTLKWALWDWEATAYYQPLIDAYKKDHPNVTIEYVDLGSTDYMTMLSTQ------LSGG 109
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI-AAIVTAILENG 165
L + G +N S + ++ + V I NG
Sbjct: 110 ADLDILTIKDIPGYVNLVKQNHLEPLKSFIDTQGIDTSLYGGTVEQIQMNG 160
>gi|227549421|ref|ZP_03979470.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078498|gb|EEI16461.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
Length = 846
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 4/97 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R I L ++ C G P P +P + S++
Sbjct: 1 MRRLPAIALAACVVIGVCAPQAPFAIGQPA-QPAQPGQQPTMPIPLHPTNPAVSEAWVNP 59
Query: 61 YSLWRDSHAA---LFKDSRALNVGDILTVDIRIDDQA 94
+ A L RALN + +TV + + + +
Sbjct: 60 AVRPGEGEKAQITLVDAPRALNPNEPVTVTLLVTNTS 96
>gi|330448697|ref|ZP_08312345.1| calcineurin-like phosphoesterase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492888|dbj|GAA06842.1| calcineurin-like phosphoesterase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 662
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 40/138 (28%), Gaps = 1/138 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ I + + L GC ++ S ++ + +N P +
Sbjct: 1 MFTKPLIAISVAIALAGCATAPSVQHQPFSLTVAHINDTHSNFDPVKSSFKADGTKVYNE 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ + + K+ +A D ++ A + + +++ + L
Sbjct: 61 FGGY-PRLQTMAKEYKAEAKKDNQSLLFLHGGDAWQGSAYFKLNQGAMNADMLSKMGLDA 119
Query: 121 QQTPQMNGNLNYDGGGAS 138
+LN A
Sbjct: 120 MALGNHEFDLNNKKLNAF 137
>gi|290962170|ref|YP_003493352.1| lipoprotein [Streptomyces scabiei 87.22]
gi|260651696|emb|CBG74821.1| putative lipoprotein [Streptomyces scabiei 87.22]
Length = 578
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 5/160 (3%)
Query: 3 RYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + LC + LL GC S+ S + + + S + LG D
Sbjct: 20 RRIAVALCGALLLGGCGDSAPSLLAVKAVAAGVASLAPFFDEGEQLGRDEPRLTPLTPHS 79
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR-NNSLHRKLSGGFSLFG 120
L + + L+ ++ V D+ + D A +N+ K G
Sbjct: 80 GLQQGNAPGLYGGTQKPTVCDVRKL---EDFLAAPENEKKAQEWARVTGVKADGIGRYLD 136
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTA 160
TP + + ++ L IA +V
Sbjct: 137 SLTPVLLRHDTLVKNHDYKKGRAVPFDALLEAGIAVLVDD 176
>gi|320162511|ref|YP_004175736.1| putative ABC transporter substrate binding protein [Anaerolinea
thermophila UNI-1]
gi|319996365|dbj|BAJ65136.1| putative ABC transporter substrate binding protein [Anaerolinea
thermophila UNI-1]
Length = 646
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 37/141 (26%), Gaps = 13/141 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGID-----FKNSD 55
M R+ ++L +L GC + + +P D P L +
Sbjct: 1 MKRWIPLLLITLALASGCIVPPTATPAVSTATPAPLPTDTPVPTPELPKTLVVCLAEEPQ 60
Query: 56 STKKSY----SLWR---DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
+ S+W + F D+R V ++ + + + +
Sbjct: 61 TLYPYGGNSRSMWAVLEALYDGPF-DTRQYAVQPVILEKMPALSDGDARIEAVKVKAGDP 119
Query: 109 HRKLSGGFSLFGQQTPQMNGN 129
+G +
Sbjct: 120 VVDTAGNLVALAAGVQVLPAG 140
>gi|170680870|ref|YP_001743821.1| putative autotransporter [Escherichia coli SMS-3-5]
gi|170518588|gb|ACB16766.1| putative autotransporter [Escherichia coli SMS-3-5]
Length = 1984
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 24/153 (15%)
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ I A D+ + N L+ + + G S +
Sbjct: 312 IYITKTVGATVDDPASSNVFNLSDAVLTDQGGNAALNGATVIEINGSRIVLNNDGDISAT 371
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL---------------NVTG-- 188
+ + + + + NG++++ G VN + L VTG
Sbjct: 372 GKDSVVVAMTGNDITVNNNGHMVVDGGTAGVVNGDRAILNNRGDAVITNGGAGVIVTGDN 431
Query: 189 -IVR---PQDVDAHNSVSYDKIA-EA-RISYGG 215
++ D+D NSV K+A A RI G
Sbjct: 432 AVINNTGQSDIDGDNSV-SVKVAGNATRIKMEG 463
>gi|258406498|ref|YP_003199240.1| RND efflux system, outer membrane lipoprotein, NodT family
[Desulfohalobium retbaense DSM 5692]
gi|257798725|gb|ACV69662.1| RND efflux system, outer membrane lipoprotein, NodT family
[Desulfohalobium retbaense DSM 5692]
Length = 481
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 22/208 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F+V S +L GC PM + D + + + + + +
Sbjct: 1 MQRCLFLVGVASIVLTGCMPFHPPARNSTAPVPMPETFDSEAQEQAVPAPWWKALDSPEL 60
Query: 61 YSLWRDS-------HAALFKDSRALNVGDILTVDI---------RIDDQAVFDNQTGRSR 104
L + + +A + +A D + ++ + +
Sbjct: 61 NRLVQTALEHNFSIRSAWARLRQARAQLDRAEASLWPSLEGSGTGERTRSYREQTDMTTS 120
Query: 105 NNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
N + +S + L + AS + A + I A L
Sbjct: 121 ANEMSYGVSASYELDLWGRARSARQAQVLSSSASRQDVEAA-AASVVGQITATWLETLS- 178
Query: 165 GNLIISGSQEVR-VNDEIRSLNVTGIVR 191
L + R + E + L + +R
Sbjct: 179 --LREQVLRLRRQIAAEKKVLRLQ-RIR 203
>gi|330819605|ref|YP_004348467.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
gladioli BSR3]
gi|327371600|gb|AEA62955.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
gladioli BSR3]
Length = 510
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 38/155 (24%), Gaps = 10/155 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ + ++ + GC + +S S P +
Sbjct: 4 MRKFVLSAMAFALVATGCTMAPHYQRPAAPVSGSFPSDGVYATQPGADGSHSANGQAAAD 63
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
F D R + ++ + ++ + + +G F
Sbjct: 64 I-----GWRNFFADPR---LQALIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLD 115
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
L +G ISR + L +
Sbjct: 116 GTGTGNTQRLPAGVST--TGSPFISRDYNVGLSAS 148
>gi|302865529|ref|YP_003834166.1| hypothetical protein Micau_1027 [Micromonospora aurantiaca ATCC
27029]
gi|302568388|gb|ADL44590.1| hypothetical protein Micau_1027 [Micromonospora aurantiaca ATCC
27029]
Length = 314
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 8/71 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R ++ L C + ++ P P ++ P + + +
Sbjct: 1 MRRVLALLGIPLLALSACATPGADPGTAPPAGP--------DQRPAFTERAEEVAAGWRP 52
Query: 61 YSLWRDSHAAL 71
WRD + L
Sbjct: 53 GPGWRDGYVPL 63
>gi|187929241|ref|YP_001899728.1| putative lipoprotein transmembrane [Ralstonia pickettii 12J]
gi|187726131|gb|ACD27296.1| putative lipoprotein transmembrane [Ralstonia pickettii 12J]
Length = 278
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/163 (10%), Positives = 37/163 (22%), Gaps = 10/163 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L +LL C + +E T + ++ + +
Sbjct: 1 MLRPKLLCLGVVALLAACSNLQTEPTDASAQA-TNATPSTTAAQAKPAVLPAPTTPPIVF 59
Query: 61 YSLWRDSHAAL---------FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
S + + RA ++ + D A S +
Sbjct: 60 GSTDGSGTTTVNLPSKDKMSLSEYRAQTRDRLIQSEGARPDVADCAAHASWIIPRSTNFD 119
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + G +S N +
Sbjct: 120 QFRLPTGALSNDQAKVEPWDSRFSSSKQGAIKVSSVVSFNAAV 162
>gi|295691126|ref|YP_003594819.1| acid phosphatase [Caulobacter segnis ATCC 21756]
gi|295433029|gb|ADG12201.1| Acid phosphatase [Caulobacter segnis ATCC 21756]
Length = 259
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 21/58 (36%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R S++V L GC + + P+ P + ++ P ++ ++
Sbjct: 1 MRASWLVGLALLALTGCATLSGDAGTYPRYLPKSAFDARDHVPPPPAKGSPQAEKDRQ 58
>gi|229528510|ref|ZP_04417901.1| protein F-related protein [Vibrio cholerae 12129(1)]
gi|229334872|gb|EEO00358.1| protein F-related protein [Vibrio cholerae 12129(1)]
Length = 204
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 13/168 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G +++ ++
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMPNAM 59
Query: 64 WRDSHAALFKDSRAL----------NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ A+ ++D R GD + + + + + ++
Sbjct: 60 TQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL-IAAIVTA 160
+ + G+ + G + K + RA + + + V
Sbjct: 119 RFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVVQ 166
>gi|30249672|ref|NP_841742.1| surface antigen (D15) [Nitrosomonas europaea ATCC 19718]
gi|30180709|emb|CAD85621.1| Bacterial surface antigen (D15) [Nitrosomonas europaea ATCC 19718]
Length = 758
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 61/195 (31%), Gaps = 7/195 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ F++L +S GC ++ S + ++ + + DS K S
Sbjct: 1 MKLRFLILFFSLYSLGCMANDSLVVRDIRVEGIQRTEAGTVFSYLPVKVGDVLDSKKASA 60
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
++ F D + + G +L V ++ A+ ++ + G
Sbjct: 61 AIKALYATGFFSDVKLKSEGGLLIVQVQERP-AIAQISINGAKEFDKDKLKEGLKQAGLS 119
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG-NLIISGSQEVRVNDE 180
++ + +L + + + G N I + R+
Sbjct: 120 ESRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERNRIGINFDIKEGKTARIKQ- 178
Query: 181 IRSLNVTG-IVRPQD 194
+N+ G V P+D
Sbjct: 179 ---INIVGNHVFPED 190
>gi|154148551|ref|YP_001407028.1| outer membrane lipoprotein [Campylobacter hominis ATCC BAA-381]
gi|153804560|gb|ABS51567.1| outer membrane lipoprotein [Campylobacter hominis ATCC BAA-381]
Length = 219
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M F+++ ++LL GC S S + + ++ ++P+ G+ S +
Sbjct: 1 MKFKIFLLVLITALLGGCASEKSRA--------VQTEAVKSAQIPYSGVKMSVSVGRFSN 52
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRS 103
S + + +F D T+ I Q+ + R+
Sbjct: 53 QSSYNNG---IFSDGEDRLGNQAQTILISNLQQSGRFSVMDRT 92
>gi|91226384|ref|ZP_01261183.1| putative long-chain fatty acid transport protein [Vibrio
alginolyticus 12G01]
gi|91189198|gb|EAS75478.1| putative long-chain fatty acid transport protein [Vibrio
alginolyticus 12G01]
Length = 361
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 62/195 (31%), Gaps = 8/195 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP----FLGIDFKNSDS 56
M S IV+ S L C ++ + + + + L + +
Sbjct: 1 MKNLSKIVVANSLLT--CAAAQAGGLYLYETTASDIGLASAGMAARAQDASVMAANPAGL 58
Query: 57 TKKSYSLWRDSHAALFKDSR-ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
S + + L+ D++ GD V I A + +L L G
Sbjct: 59 ANVSGKSFSGNLIGLYGDAQLDTMTGDAGNV-IGFVPMASAFYSQQVNDKWTLGIGLYGN 117
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
+ L + +N +L+ + S + ++N + ++ G + +
Sbjct: 118 YGLGLEYEGLLNNHLDIPTATTQALTIQPSASYRINDHWSVGAALGIQYGMYEVETKGAL 177
Query: 176 RVNDEIRSLNVTGIV 190
NDE + V G V
Sbjct: 178 NFNDEDQDTQVNGRV 192
>gi|30962614|gb|AAP42160.1| BexD [Haemophilus influenzae]
gi|30962625|gb|AAP42170.1| BexD [Haemophilus influenzae]
gi|30962636|gb|AAP42180.1| BexD' [Haemophilus influenzae]
gi|30962647|gb|AAP42191.1| BexD [Haemophilus influenzae]
gi|86753347|gb|ABD14828.1| BexD [Haemophilus influenzae]
gi|86753358|gb|ABD14839.1| BexD' [Haemophilus influenzae]
gi|86753369|gb|ABD14849.1| BexD [Haemophilus influenzae]
gi|86753380|gb|ABD14860.1| BexD' [Haemophilus influenzae]
gi|301169756|emb|CBW29357.1| unnamed protein product [Haemophilus influenzae 10810]
gi|301169771|emb|CBW29372.1| bexD [Haemophilus influenzae 10810]
Length = 394
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 12/176 (6%)
Query: 1 MYRYSFIVLCYSSLL--FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M Y +C +L C S + + + D + + + N +
Sbjct: 1 MRNYPLKAVCAVLMLGLSACSSLPTSGPSHSAVLEINQGADASELAAKVNVIELNESLVQ 60
Query: 59 KSYSLWRDSHAALFKDSR-------ALNVGDILTVDIRIDDQAVF---DNQTGRSRNNSL 108
+ Y+ + + F D R A+NVGD+L + I AV + + +
Sbjct: 61 QIYAAQQSQRFSGFADVRGNGGYAGAVNVGDVLEISIWEAPPAVLFGTTFSSEGQGSGHV 120
Query: 109 HRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ S + G T GN++ G + + I + V I N
Sbjct: 121 TQLPSQIVNKNGTVTVPFVGNISVAGKTPEAIQAQIVASLSRKANQPQAVVKIANN 176
>gi|300716245|ref|YP_003741048.1| lipoprotein [Erwinia billingiae Eb661]
gi|299062081|emb|CAX59197.1| Putative lipoprotein [Erwinia billingiae Eb661]
Length = 198
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 33/112 (29%), Gaps = 6/112 (5%)
Query: 1 MYRYSF---IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R V+ + +L GC + + + P+ + + +
Sbjct: 1 MERKLIKLSGVVLLALILAGCVNEQQQPQKPAPVEPVQPTQPVQPPVEPPPAETVPQPPK 60
Query: 58 KKSYSL-WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSL 108
+ S+ W S + L + +V + + + S+ +
Sbjct: 61 FQ--SINWDASVSPLIAQMLKADGVTAGSVLLVDGVKNSTNGSLQISKATAA 110
>gi|227822424|ref|YP_002826396.1| hypothetical protein NGR_c18790 [Sinorhizobium fredii NGR234]
gi|227341425|gb|ACP25643.1| hypothetical protein NGR_c18790 [Sinorhizobium fredii NGR234]
Length = 96
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ F LC + LL GC + S + P + P+ S+ + +
Sbjct: 1 MKHLFPTLCTALLLTGCEVTTSSVGYSPYLEPIPGSI-------TYRGQPRTKLTKAPVG 53
Query: 62 SLWRDSHAALFKDS 75
S+ F
Sbjct: 54 SIVPHQFIDRFGRR 67
>gi|17546726|ref|NP_520128.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
gi|17429025|emb|CAD15709.1| probable lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
Length = 251
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 8/161 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R S + L +LL C + + + P + S G + T
Sbjct: 1 MLRPSLLCLGIVALLAACSNLQNPAPEDTAPANASTASPTSNPTPAQPTGTAPALALGTP 60
Query: 59 KSYS-----LWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
L +L + RA ++ + D A S +
Sbjct: 61 DGNGNTTINLPPKDKMSL-SEYRAQTRDRLIQSEHARPDVADCAAHASWIVPRSTNFDQF 119
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ + + + G +S N +
Sbjct: 120 RLPTGALSEGQAKVEPWDSRFSQSKQGAIKVSSVVSFNAAV 160
>gi|298385861|ref|ZP_06995418.1| outer membrane protein [Bacteroides sp. 1_1_14]
gi|298261089|gb|EFI03956.1| outer membrane protein [Bacteroides sp. 1_1_14]
Length = 1021
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 67/206 (32%), Gaps = 16/206 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R ++ +L C + I ++ + + N +P + + K D+ +
Sbjct: 1 MRRKTYFLLFLFL----CMAGIPLAAQDIEIKGVVTEATTNEPLPGVTVRVKGKDTGTVT 56
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
D ++ + + V + + +++ +
Sbjct: 57 D---MDGKYSIKANKGNILVFSTIGMKQIERAITSGTPINVSMEEDNIALEQVVVIGYGT 113
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI---AAIVTAILENGNLIISGSQEVRV 177
+ ++G + +G+ + + A L I + ++ NG++ I+ +
Sbjct: 114 VKKSHLSGAVGSVSAKELNGQVASNAATALQGKIPGVSVASSSGDPNGSMTINVRGISSL 173
Query: 178 NDEIRSLNVTG------IVRPQDVDA 197
++ V G +V P D+ +
Sbjct: 174 SNNNPLYVVDGAFGDISMVDPNDISS 199
>gi|269122432|ref|YP_003310609.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
gi|268616310|gb|ACZ10678.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
Length = 926
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 44/183 (24%), Gaps = 9/183 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +V L C SS G +P + P
Sbjct: 1 MKKKFLLVTALLIALTACGSSGGGGGGG-GGTPATPIPSTPDPDPGTVTTPDAPYVPFNK 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN---SLHRKLSGGFS 117
+ S + G +T+ I + + S NN S G +
Sbjct: 60 SDPHKASTV-----KSSGINGTGVTIGIIDTGFDTANAEFKDSLNNPRISTDPSFPGNTN 114
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
G ++ G K + + + T + +L G +
Sbjct: 115 AHGSLVAEIAGGKTIGMAPNVKIKAISAGVTCDDGTDTCVDTTLPMYQSLYNDGVRIFNQ 174
Query: 178 NDE 180
+
Sbjct: 175 SFG 177
>gi|189460027|ref|ZP_03008812.1| hypothetical protein BACCOP_00662 [Bacteroides coprocola DSM
17136]
gi|189433277|gb|EDV02262.1| hypothetical protein BACCOP_00662 [Bacteroides coprocola DSM
17136]
Length = 401
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R+ ++ SL C + + E +P S + + F+ K+
Sbjct: 1 MKRFIYVSALALSLFCSCETGVEEWNPTGPQTP-PPSQEVVDYAARGYEVFELVQEYYKT 59
Query: 61 YSLWRDS 67
+L+R++
Sbjct: 60 GNLYREN 66
>gi|163847011|ref|YP_001635055.1| hypothetical protein Caur_1438 [Chloroflexus aurantiacus J-10-fl]
gi|222524834|ref|YP_002569305.1| hypothetical protein Chy400_1561 [Chloroflexus sp. Y-400-fl]
gi|163668300|gb|ABY34666.1| hypothetical protein Caur_1438 [Chloroflexus aurantiacus J-10-fl]
gi|222448713|gb|ACM52979.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 414
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 5/61 (8%), Positives = 17/61 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + ++ + +L C + + + P + + + +
Sbjct: 1 MRRTGWFIILIALMLVACTNQPAPTPTATEAVPTAVPATSVPVSEPTPVTTELTPEVVAA 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|223985202|ref|ZP_03635287.1| hypothetical protein HOLDEFILI_02593 [Holdemania filiformis DSM
12042]
gi|223962819|gb|EEF67246.1| hypothetical protein HOLDEFILI_02593 [Holdemania filiformis DSM
12042]
Length = 728
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDEN-NRMPFLGIDFKNSDSTKK 59
M + +L L C + ++ T P +P+ S +D + P +F+ + +
Sbjct: 1 MKKILISMLALLCLTTACSKAENKPTPEPSSNPVISVVDLPVTQAPIAQPEFETTWALTS 60
Query: 60 S 60
+
Sbjct: 61 T 61
>gi|295688037|ref|YP_003591730.1| lytic murein transglycosylase [Caulobacter segnis ATCC 21756]
gi|295429940|gb|ADG09112.1| lytic murein transglycosylase [Caulobacter segnis ATCC 21756]
Length = 435
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSH 68
+ LL GC + +P +S + + P + ++ +
Sbjct: 7 VFLVLLLAGCAETAPHPQMTHPPAPKPASQPQTPQTPSTTPAIPQTQVDAET-----QAF 61
Query: 69 AALFKDSRALNV 80
A D R +
Sbjct: 62 DAWLADFRPRAI 73
>gi|168821895|ref|ZP_02833895.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205341657|gb|EDZ28421.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320086257|emb|CBY96031.1| Uncharacterized protein yoaF [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 83
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 18/58 (31%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++++I L LL C SS P + + + + + +
Sbjct: 1 MKFTWIALPGVLLLSACSSSQPNAPRPPLIGMPNPAAVYCEQQGGTLMPVQTPQGVRS 58
>gi|313901059|ref|ZP_07834547.1| TRAP transporter solute receptor, DctP family [Clostridium sp.
HGF2]
gi|312954017|gb|EFR35697.1| TRAP transporter solute receptor, DctP family [Clostridium sp.
HGF2]
Length = 334
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP--MGSSLDENNRMPFLGIDFKNSDSTK 58
M + F + +S LL GC I + P + + ++ F
Sbjct: 1 MKKILFALFTFSLLLSGCAQKIEDPAEASAAYPWIIATDSPKDTVTGLFAHKFAEEVEWL 60
Query: 59 KSYSL 63
+ S+
Sbjct: 61 SNGSI 65
>gi|229513150|ref|ZP_04402615.1| protein F-related protein [Vibrio cholerae TMA 21]
gi|229349560|gb|EEO14515.1| protein F-related protein [Vibrio cholerae TMA 21]
Length = 204
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G + + S +
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA-- 58
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLFGQQ 122
S +A ++D R + + + ++ D + N T R S ++ L
Sbjct: 59 MTQSRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 R---FLATESGIDIVLEGHTDNTGSEKLNDKLA 148
>gi|107023241|ref|YP_621568.1| hypothetical protein Bcen_1691 [Burkholderia cenocepacia AU 1054]
gi|116690324|ref|YP_835947.1| hypothetical protein Bcen2424_2303 [Burkholderia cenocepacia
HI2424]
gi|254247610|ref|ZP_04940931.1| Hypothetical protein BCPG_02414 [Burkholderia cenocepacia PC184]
gi|105893430|gb|ABF76595.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116648413|gb|ABK09054.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
gi|124872386|gb|EAY64102.1| Hypothetical protein BCPG_02414 [Burkholderia cenocepacia PC184]
Length = 323
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
F++L ++LL GC + P + ++E P ++
Sbjct: 21 VFLILAVAALLSGCGLLPVQNPPAPISEALVEPVEETAGEPLTMPPVPAPTQPEEP 76
>gi|60115364|gb|AAX14034.1| EpsA [Halomonas maura]
Length = 376
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Query: 3 RYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R +VLC ++ L GC + S + + +P+ +D L + + + +
Sbjct: 7 RTLLLVLCSAAWLSGCAFAPGSHVDYQSESAPIDDLVDVEPITLGLINAQQPTATATELR 66
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLH 109
+ + AAL + GD+L++ + + RS S +
Sbjct: 67 QMNDEQRAALEGYDYRIGKGDVLSITVYEHPELTIPAGGERSAEESGN 114
>gi|241765426|ref|ZP_04763396.1| cell division protein FtsA [Acidovorax delafieldii 2AN]
gi|241364831|gb|EER59804.1| cell division protein FtsA [Acidovorax delafieldii 2AN]
Length = 409
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 19/75 (25%)
Query: 151 NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDK----- 205
+ A+V +L NG L ++G N R G+V V+ +V +
Sbjct: 16 TAKVMAVVAEVLPNGELKLAGLGVAPSNGLKR-----GVV----VNIDATVQSIQQALKE 66
Query: 206 ---IAEARIS--YGG 215
+A+ +I Y G
Sbjct: 67 AELMADCKIQRVYTG 81
>gi|229526017|ref|ZP_04415421.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
gi|229336175|gb|EEO01193.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
Length = 204
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 6/153 (3%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G +++ ++
Sbjct: 1 MKFWVLCVAFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMPNAM 59
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ A+ ++D R + + + ++ D + N T R S ++ L
Sbjct: 60 TQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 R---FLATESGIDIVLEGHTDNTGSEKLNDKLA 148
>gi|71906228|ref|YP_283815.1| hypothetical protein Daro_0588 [Dechloromonas aromatica RCB]
gi|71845849|gb|AAZ45345.1| hypothetical protein Daro_0588 [Dechloromonas aromatica RCB]
Length = 125
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 6/80 (7%), Positives = 22/80 (27%), Gaps = 8/80 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+++ + + +L GC + + ++ E + + +
Sbjct: 3 MKFALTGIAAAIILSGCVVAPAPMSR--------PYYREPVMVAPPPPRVEYMGAPPVVG 54
Query: 62 SLWRDSHAALFKDSRALNVG 81
+W + + G
Sbjct: 55 QVWINGFWNWAGNRHEWVPG 74
>gi|257458018|ref|ZP_05623177.1| putative lipoprotein [Treponema vincentii ATCC 35580]
gi|257444731|gb|EEV19815.1| putative lipoprotein [Treponema vincentii ATCC 35580]
Length = 239
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMS-PMGSSLDENNRMPFLGIDFKNSDSTKK 59
YRY + S+ GC S S + P S + E + P I + +
Sbjct: 5 YRYVLLCFIIISIAAGCTSVPSPVKDGPVQSQEVAVPAPEPVKEPESVIKQEPVEPAVP 63
>gi|157369238|ref|YP_001477227.1| hypothetical protein Spro_0995 [Serratia proteamaculans 568]
gi|157321002|gb|ABV40099.1| protein of unknown function DUF333 [Serratia proteamaculans 568]
Length = 87
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 1 MYRYSFIVLCY-SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + I L ++L GC + ++ P+M P+G + + +G +
Sbjct: 1 MKKILMISLFAGMAMLQGCTMNSNDAPPPPKMKPIGMANPADVYCTEIGGKLNAKQNANG 60
Query: 60 SYS 62
YS
Sbjct: 61 QYS 63
>gi|251798650|ref|YP_003013381.1| hypothetical protein Pjdr2_4681 [Paenibacillus sp. JDR-2]
gi|247546276|gb|ACT03295.1| hypothetical protein Pjdr2_4681 [Paenibacillus sp. JDR-2]
Length = 505
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 14/59 (23%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + + + LL GC S+ S I FK
Sbjct: 2 MSKITAAFIAIGLLLAGCQSNNPNQADAETTSMPAPVSPATAEQTAEPIAFKEDPPDSA 60
>gi|326789204|ref|YP_004307025.1| beta-lactamase [Clostridium lentocellum DSM 5427]
gi|326539968|gb|ADZ81827.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427]
Length = 288
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
+ SFI+L + L GC ++ S P +P ++ P + S+
Sbjct: 3 KKLSFILLSLTLCLAGCSNTGS--ASTPASTPAEATASPEASAPANSEEPIESEPA 56
>gi|218534712|ref|YP_002424474.1| TraH protein [Yersinia pseudotuberculosis]
gi|218473181|emb|CAQ76609.1| TraH protein [Yersinia pseudotuberculosis]
Length = 151
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSSI-SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ S++ LL GCH+ T PQ + ++ + + N +
Sbjct: 1 MKLSYLASFGLLLLSGCHARQADHPTPPPQPASANAAQLQATQQELYLKGALNQKAPHIP 60
Query: 61 YSLWRDSHA 69
S+ +S
Sbjct: 61 GSITANSQR 69
>gi|209542422|ref|YP_002274651.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl
5]
gi|209530099|gb|ACI50036.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 521
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 45/189 (23%), Gaps = 10/189 (5%)
Query: 1 MYRYSFIVLC--YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R + + L GC + +P ++ + G +
Sbjct: 1 MTRPASLATIGFAMLGLAGCATQALHSAPDRPDAPWRPNVSAAGEI-IPGPCCARGLALP 59
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
YSL S+ + + + R + R + +
Sbjct: 60 PGYSL--PSNRNIQGRPAPPELQGAHPYSLAELIDIAQSTNPDTRRAWNTARDAALAVGI 117
Query: 119 F-GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRV 177
P + + A + + + V NG + G + +
Sbjct: 118 ARSTYLPHLTATVVGGYNHAHDSGANAAIGNVDIGGTSTRVG----NGEVQTLGLEWLLF 173
Query: 178 NDEIRSLNV 186
+ R +
Sbjct: 174 DFGKREATI 182
>gi|10441406|gb|AAG17023.1|AF186845_2 OspB [Borrelia bissettii]
Length = 265
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 12/150 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK--SY 61
+ + L GC + P+ +P + E D K + T +
Sbjct: 2 RLLLGFALTLALIGCA----QKGAEPKNTPQKYNDQELIDSSKAPKDAKQTLPTVAEDTV 57
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ + L K+ + D+ T+ DQ + +NN
Sbjct: 58 SLFSGNEIFLSKEKNSSGKYDLRTII----DQVELKGTSD--KNNGSGSLEGVKADKSKV 111
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
+ + S IS +
Sbjct: 112 KLTVSDDLNTITVETFDSSGKKISSKVTVK 141
>gi|321254990|ref|XP_003193271.1| CAT1 catalase [Cryptococcus gattii WM276]
gi|317459741|gb|ADV21484.1| CAT1 catalase, putative [Cryptococcus gattii WM276]
Length = 701
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 6/119 (5%)
Query: 12 SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
S+ GC I P S +P K++ S+ + + +L
Sbjct: 91 SASFNGCPYMNGSIPQTPTPKSTPKSASVAAPIPLPPPSAARLKGQKQNGSIPQMNGNSL 150
Query: 72 FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNL 130
D + LT+ D+ + + + +N + G P + +
Sbjct: 151 GGDV------EKLTIRSYEKDRDLKSQEVVYTTSNGVPVPHPYATQRAGVNGPLLLQDF 203
>gi|300717804|ref|YP_003742607.1| hypothetical protein EbC_32290 [Erwinia billingiae Eb661]
gi|299063640|emb|CAX60760.1| Uncharacterized protein [Erwinia billingiae Eb661]
Length = 98
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R VL L GC SS + ++S + + L +++
Sbjct: 1 MRKILTVLAIVLFLSGCTSSTGKDFDDAKLSKIQYGQTSRQDLISLFGQPTTETPYPENH 60
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRS 103
L S + ++A + + T+ +++D V ++
Sbjct: 61 LLMMWS----YSQAKAGSTTEGKTLTVQLDGGKVKSYTVSKT 98
>gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 242
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L ++L GC S+ + +P
Sbjct: 1 MKRLTLTTLLAVAILSGCSSTEEVVPDVPP 30
>gi|149377634|ref|ZP_01895372.1| Lipoprotein [Marinobacter algicola DG893]
gi|149358107|gb|EDM46591.1| Lipoprotein [Marinobacter algicola DG893]
Length = 289
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/191 (9%), Positives = 56/191 (29%), Gaps = 21/191 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP-----QMSPMGSSLDENNRMPFLGIDFKNSD 55
M R+ +++ L GC SS +P G+ +
Sbjct: 1 MKRHVLLLVFGVLALAGCASSPEPDHSSRYTLSQDRAPSGNFDASGLADATPRFEEPRRA 60
Query: 56 STKKSYSLW--------------RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTG 101
K Y +W + A+ + + + ++ + +++
Sbjct: 61 GNKSPYQVWGKEYHVLGNNDGYVQRGTASWYGEK--FHGHKTSNGEVFDMYEMSAAHKSL 118
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAI 161
R + L G S+ + + + + + + + + + +
Sbjct: 119 RIPGYARVTNLDNGRSVVVRVNDRGPFHGDRLIDLSYAAAKKLGYQGRGTARVEVAAITV 178
Query: 162 LENGNLIISGS 172
+G+++++G
Sbjct: 179 NRDGSMMLAGK 189
>gi|219847977|ref|YP_002462410.1| hypothetical protein Cagg_1060 [Chloroflexus aggregans DSM 9485]
gi|219542236|gb|ACL23974.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
Length = 213
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 6/63 (9%), Positives = 15/63 (23%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L C ++ + + P P + + +
Sbjct: 1 MRTLLLMAIVALFLFTACGTATTSVPAQPTAPPNQPVPTQPPAATRDLAAPVPGVAEPTA 60
Query: 61 YSL 63
L
Sbjct: 61 TQL 63
>gi|146311209|ref|YP_001176283.1| curli production assembly/transport component CsgG [Enterobacter
sp. 638]
gi|145318085|gb|ABP60232.1| Curli production assembly/transport component CsgG [Enterobacter
sp. 638]
Length = 277
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 38/239 (15%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG------------ 48
M R F++L LL GC ++ + P + P S + +P
Sbjct: 1 MQR--FLILVAVCLLSGCLTAPPKEAAKPTLMPRAQSYRDLTHLPMPTGKIFVSVYNIQD 58
Query: 49 ------IDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDI--LTVDIRIDD---QAVFD 97
++ ST S AL KDSR + L + A +
Sbjct: 59 ETGQFKPYPASNFSTAVPQSATAMLVTAL-KDSRWFIPLERQGLQNLLNERKIIRAAQEN 117
Query: 98 NQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
G + L ++ + G + + G G G+ ++ + + +
Sbjct: 118 GTAGVNNRTPLQSLVAANVMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLR 177
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V + L + + ++ E++ G+ R + Y ++ E I Y
Sbjct: 178 VVNVSTGEVLSSVTTSKTILSYEVQ----AGVFR--------FIDYQRLLEGEIGYTSN 224
>gi|116249126|ref|YP_764967.1| putative capsule polysaccharide export protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115253776|emb|CAK12170.1| putative capsule polysaccharide export protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 379
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 52/189 (27%), Gaps = 22/189 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L ++L C T + N R+P + + +
Sbjct: 1 MRK--LAPLVLVAVLSACARPSDGPTAGGFYNATAP--QSNERIPVVRLSEAPMGPVAAT 56
Query: 61 YSLWRDSHAAL-------FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ + L F D+R GD++ V I + + T N +
Sbjct: 57 PLAYAATDPGLSLMRSSGFADTRLRR-GDVIEVTILDTGEEGLFSSTQSKTLNLGRFTVD 115
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + + + + + +N V +G
Sbjct: 116 STGNVTLPFVGKQRVVDSSTEALQTRIVTGLKGS-AVNPQAVVTVVDRPSSG-------- 166
Query: 174 EVRVNDEIR 182
+ VN ++R
Sbjct: 167 -ITVNGDVR 174
>gi|87308698|ref|ZP_01090837.1| hypothetical protein DSM3645_10682 [Blastopirellula marina DSM
3645]
gi|87288409|gb|EAQ80304.1| hypothetical protein DSM3645_10682 [Blastopirellula marina DSM
3645]
Length = 169
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + GC G P + P+ ++ + + + N + +
Sbjct: 24 MNTIHATLFLIAVAFVGCTQKPDLPEGTPPLYPLTGTVVYDGQPLTDAVVVFNPTQGEVA 83
Query: 61 YSLWRDSHAALFKDSRALNVGD 82
S D+ +RA D
Sbjct: 84 GSAMTDAEGKF--RARAYPPHD 103
>gi|126660518|ref|ZP_01731625.1| laccase [Cyanothece sp. CCY0110]
gi|126618218|gb|EAZ88980.1| laccase [Cyanothece sp. CCY0110]
Length = 496
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 9/132 (6%)
Query: 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSG 140
GD + ++++ ++ ++ + ++ L +Q L
Sbjct: 124 GDNVFLEVKPKEKFTYEFDIPTKQTGGINWYHPHLHGLVAEQLSGGLAGLFIIRDQLDEI 183
Query: 141 KGSISRAEKLNLLIAAIVTA---ILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDA 197
+ E+ +V + ENGNL+ S + + E + V G V P
Sbjct: 184 PEIKAAKEEF------LVLQDFFLDENGNLLPSNQMPLMMGREGNVITVNGEVNPSFSMP 237
Query: 198 HNSVSYDKIAEA 209
N + +I A
Sbjct: 238 ENGLLRLRIVNA 249
>gi|302383880|ref|YP_003819703.1| beta-Ig-H3/fasciclin [Brevundimonas subvibrioides ATCC 15264]
gi|302194508|gb|ADL02080.1| beta-Ig-H3/fasciclin [Brevundimonas subvibrioides ATCC 15264]
Length = 327
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 17/61 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + LFG S+ ++ P +P P + +
Sbjct: 1 MLRTRLLTATAAIALFGAGSAFAQDAMAPAQTPATPPAQSAAPTPVPNEAVTPPQAATPA 60
Query: 61 Y 61
Sbjct: 61 A 61
>gi|225574645|ref|ZP_03783255.1| hypothetical protein RUMHYD_02722 [Blautia hydrogenotrophica DSM
10507]
gi|225038137|gb|EEG48383.1| hypothetical protein RUMHYD_02722 [Blautia hydrogenotrophica DSM
10507]
Length = 246
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 56/221 (25%), Gaps = 33/221 (14%)
Query: 2 YRYSFIVLCYSS--LLFGC------HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
YR + L GC + + E I +P + P +
Sbjct: 5 YRIQLCLTAALLAGCLAGCGGSEKTSAPVKEEAQIAAETPTATPKPTATITPTPMPEPVK 64
Query: 54 SDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDD---QAVFDNQTGRSRNNSLHR 110
+ K L+ D NV D + + + + T + +
Sbjct: 65 YQTEDKKMILYLP-------DKSWENVSDQDGIRLFESEGKGNITILHGTKEELEDFIIP 117
Query: 111 KLSGGFSLFGQQTPQMNGNLNYD-GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLII 169
F ++ + S G I R + AA +
Sbjct: 118 DSEKAVGQFYKENGIGKRDYEVQKYVNNSIGDVGIYR-YTVRFEEAAGFEYVYSV----- 171
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDV----DAHNSVSYDKI 206
V +V+G V+ DV N+V +I
Sbjct: 172 ----NYVVTAGSEIFSVSGTVQQDDVALLEQITNAVESLQI 208
>gi|262168510|ref|ZP_06036206.1| protein F-related protein [Vibrio cholerae RC27]
gi|262023039|gb|EEY41744.1| protein F-related protein [Vibrio cholerae RC27]
Length = 204
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 6/153 (3%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G + + S +
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMSNA-- 58
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLFGQQ 122
+A ++D R + + + ++ D + N T R S ++ L
Sbjct: 59 MTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 R---FLATESGIDIVLEGHTDNTGSEKLNDKLA 148
>gi|222107922|gb|ACM44981.1| Gna2132 [Neisseria meningitidis]
Length = 419
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 2/153 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP-QMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M++ S I + L C + +P + + ++
Sbjct: 1 MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPTAPVVAEKETEAKEDAPQAGSQG 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + A N G+ +Q +N + +G
Sbjct: 61 QGAPSTQGSQDM-AAVSAENTGNGGAATTDNPKNEDEGSQNDMPQNAAESANQTGNNQPA 119
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
G Q P + N N GG G+ ++ + ++
Sbjct: 120 GSQNPAPSTNPNATNGGGDFGRTNVGNSVVIDG 152
>gi|297198527|ref|ZP_06915924.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297147118|gb|EDY60225.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 365
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 70/243 (28%), Gaps = 44/243 (18%)
Query: 1 MYRYSFIVLCY------SSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M R + + +L GC S + S+ PF K +
Sbjct: 1 MSRIRLPLAALSLASVSALVLSGCSQSTDASKNTGDAAASASAATGKKPAPFSAGAVKVA 60
Query: 55 DSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL-- 112
+ + + ++A +G LTV D A + N+ +
Sbjct: 61 LVRQSGAGDYFEQWGNG-AKAQAKALGIDLTVYDAQADNAKQATDLSSAINSGAKAIIID 119
Query: 113 ----SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLI 168
+ + + + YD ++ G S + + +A V ++
Sbjct: 120 HGFPATIQPEIDKAVKKGIKVVVYDVETSTKGVVSTEQDD---ASMAQAVLDVM------ 170
Query: 169 ISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
++++ N E+ +NV G +D N+V ++A
Sbjct: 171 ---AKDLGKNAEVGYVNVAGY---AALDKRNTVWAKEVA----------------AQGWK 208
Query: 229 HQL 231
Q
Sbjct: 209 QQF 211
>gi|90578293|ref|ZP_01234104.1| hypothetical protein VAS14_14619 [Vibrio angustum S14]
gi|90441379|gb|EAS66559.1| hypothetical protein VAS14_14619 [Vibrio angustum S14]
Length = 661
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 42/143 (29%), Gaps = 1/143 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+ I L + + GC ++ ++ + +N P +
Sbjct: 1 MFSKPLIALSITLAISGCATTPIVQHQPFTLTVAHINDTHSNFDPVKSSFKADDTKVYNE 60
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ + + K+ +A D ++ A + + + +++ + L
Sbjct: 61 FGGY-PRLQTMAKEYKAEAKKDNQSLLFLHGGDAWQGSAYFKLNHGAMNADMLSKMGLDA 119
Query: 121 QQTPQMNGNLNYDGGGASSGKGS 143
+LN A G +
Sbjct: 120 MALGNHEFDLNNKKLNAFIGSVN 142
>gi|300933106|ref|ZP_07148362.1| putative beta-glucosidase-related glycosidase [Corynebacterium
resistens DSM 45100]
Length = 411
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 16/62 (25%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + LL GC + +P +S S +
Sbjct: 1 MRRILVAISASALLLAGCSTDSGPTPPAHDSTPAETSPSAAATSGGSDSSKAPSQDGRSG 60
Query: 61 YS 62
S
Sbjct: 61 KS 62
>gi|119897597|ref|YP_932810.1| hypothetical protein azo1306 [Azoarcus sp. BH72]
gi|119670010|emb|CAL93923.1| hypothetical secreted protein [Azoarcus sp. BH72]
Length = 158
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 16/49 (32%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
L + LL C + + ++ P+ + + P + +
Sbjct: 20 ALLVAVLLSACAGAPPQAEPAAEVEPLRPAPESPVVAPAGEPEPAVAGR 68
>gi|150388153|ref|YP_001318202.1| RND family efflux transporter MFP subunit [Alkaliphilus
metalliredigens QYMF]
gi|149948015|gb|ABR46543.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
Length = 384
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 7/93 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R+ +++ + +L GC S+ S + + D ++ +
Sbjct: 1 MTRWFLLIMITTVILAGCSSTTSVEGDEAE-----PTDDYVAVEVSQVEMRGLANEATLN 55
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQ 93
++ ++ + R + D + V + Q
Sbjct: 56 GRVFSENEVMVL--PRTPGIVDCVNVKLGDSVQ 86
>gi|300939174|ref|ZP_07153860.1| conserved domain protein [Escherichia coli MS 21-1]
gi|300455947|gb|EFK19440.1| conserved domain protein [Escherichia coli MS 21-1]
Length = 1023
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 24/153 (15%)
Query: 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ I A D+ + N L+ + + + G S +
Sbjct: 95 IYITKTVGATVDDPANSNVFNLSDAVLTDQGGNAARNGATVIEINGSRIVLNNDGDISAT 154
Query: 146 RAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSL---------------NVTG-- 188
+ + + + + NG++++ G VN + L VTG
Sbjct: 155 GKDSVVVAMTGNDITVNNNGHMVVDGGTAGVVNGDRAILNNRGDAVITNGGAGVIVTGDN 214
Query: 189 -IVR---PQDVDAHNSVSYDKIA-EA-RISYGG 215
++ D+D NSV K+A A RI G
Sbjct: 215 AVINNTGQSDIDGDNSV-SVKVAGNATRIKMEG 246
>gi|145300755|ref|YP_001143596.1| hypothetical protein ASA_3894 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853527|gb|ABO91848.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 194
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 16/61 (26%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +++ + LL GC + T P P + + +
Sbjct: 1 MMNMRSLLMVGALLLGGCSINPYGGTPAPVTEPDQPVIQPEKPVTKPDAGAPLPKPVAPT 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|149911633|ref|ZP_01900244.1| hypothetical protein PE36_02949 [Moritella sp. PE36]
gi|149805303|gb|EDM65317.1| hypothetical protein PE36_02949 [Moritella sp. PE36]
Length = 209
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 17/58 (29%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R +V+ L GC +I + + P + + + F +
Sbjct: 8 MRKLLLVIALPVLASGCAGNIETLNADTEFGPAPQAYQQTIKDYFAQELNNPELAEYV 65
>gi|228990031|ref|ZP_04150004.1| hypothetical protein bpmyx0001_7970 [Bacillus pseudomycoides DSM
12442]
gi|229000783|ref|ZP_04160287.1| hypothetical protein bmyco0003_52930 [Bacillus mycoides Rock3-17]
gi|228758946|gb|EEM07988.1| hypothetical protein bmyco0003_52930 [Bacillus mycoides Rock3-17]
gi|228769697|gb|EEM18287.1| hypothetical protein bpmyx0001_7970 [Bacillus pseudomycoides DSM
12442]
Length = 288
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L LL GC++S P + ++ + N T++
Sbjct: 19 MKKIILGTLTTFFLLAGCNNSTE---SKPVDTKKTAAEETTKSTKNEDKQDTNPKKTEEV 75
Query: 61 YSLWRDSHAALFKD--SRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
S S ++ DI+T+ ++ D + F+ T +++ +
Sbjct: 76 LSPTNQSTKDFITPLLVKSETPADIMTIQMQEDKKQKFEEITKKTQAS 123
>gi|71909790|ref|YP_287377.1| hypothetical protein Daro_4181 [Dechloromonas aromatica RCB]
gi|71849411|gb|AAZ48907.1| Protein of unknown function DUF1615 [Dechloromonas aromatica RCB]
Length = 390
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP 33
M+R L + LL GC + P + P
Sbjct: 1 MHRIVVPALLTAVLLAGCSTFEEGEGEGPALPP 33
>gi|189485774|ref|YP_001956714.1| hypothetical protein TGRD_P1-9 [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287733|dbj|BAG14253.1| hypothetical protein [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 115
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 1 MYRYSFIVLCYSSLLFGC-----HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSD 55
M + ++L S L GC +P + + + MP F +
Sbjct: 1 MKKIFAVILMLSVFLSGCHRKVITGISKNENDVPTSTNTPAPEPTSTPMPTSTPAFMDCF 60
Query: 56 STKKSYS 62
K+ S
Sbjct: 61 PKYKAPS 67
>gi|27377490|ref|NP_769019.1| polysaccharide export protein [Bradyrhizobium japonicum USDA 110]
gi|27350634|dbj|BAC47644.1| bll2379 [Bradyrhizobium japonicum USDA 110]
Length = 423
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 7/96 (7%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ L GC I + + ++L P + + ++
Sbjct: 29 ISRILALAAVGISLAGCAGFIPLDSPDAVATQTNAALVTEPTAPLAYALMPVNPAIVQAT 88
Query: 62 SLWRDSHAALFK-------DSRALNVGDILTVDIRI 90
+ + DS +F + +GDI+TV +
Sbjct: 89 NAFTDSSGMVFSRLPGGNYRDVTIGIGDIVTVTVYE 124
>gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
Length = 242
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L +LL GC S I +P
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEEVIPDVPP 30
>gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
Length = 242
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L +LL GC S I +P
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEEVIPDVPP 30
>gi|332704525|ref|ZP_08424613.1| Curli production assembly/transport component CsgG [Desulfovibrio
africanus str. Walvis Bay]
gi|332554674|gb|EGJ51718.1| Curli production assembly/transport component CsgG [Desulfovibrio
africanus str. Walvis Bay]
Length = 324
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP--MGSSLDENNRMPFLGIDFKNSDSTK 58
M R + L+ GC ++ + +P + ++++ G+ K +
Sbjct: 1 MLRVVVSLFAVMLLVSGCATTERPKAKRVEGAPAAVSPTVEQAATFDKRGVKRKVAIGRF 60
Query: 59 KSYSLWRDSHAALFKDS 75
+ S + + F D
Sbjct: 61 TNESKY---GQSFFLDK 74
>gi|167753235|ref|ZP_02425362.1| hypothetical protein ALIPUT_01506 [Alistipes putredinis DSM
17216]
gi|167659166|gb|EDS03296.1| hypothetical protein ALIPUT_01506 [Alistipes putredinis DSM
17216]
Length = 153
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMP 45
M R + ++L ++ L+ C S + ++P E +P
Sbjct: 1 MKRLALLLLAFTGLMSAC-SKDDPVPQDGSLTPDSPEGREAVTIP 44
>gi|134295387|ref|YP_001119122.1| hypothetical protein Bcep1808_1277 [Burkholderia vietnamiensis
G4]
gi|134138544|gb|ABO54287.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length = 61
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI-PQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + + S+L GC E P P + P +D + +
Sbjct: 1 MTRL-MLFVLAVSILAGCAGDPREARRGHPPQDPADYHGVPTDMTPPSMLDVSPAPAGAA 59
Query: 60 S 60
+
Sbjct: 60 A 60
>gi|148656315|ref|YP_001276520.1| alpha-2-macroglobulin domain-containing protein [Roseiflexus sp.
RS-1]
gi|148568425|gb|ABQ90570.1| alpha-2-macroglobulin domain protein [Roseiflexus sp. RS-1]
Length = 2002
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 4/62 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+YR I+L + L C P +P+ + + + +
Sbjct: 4 LYRRFAILLILAVTLAACGG----PRPQPTPTPVTAQPTPVAPQRDIPPPPDRAAPILVA 59
Query: 61 YS 62
S
Sbjct: 60 RS 61
>gi|54026207|ref|YP_120449.1| putative oxidoreductase [Nocardia farcinica IFM 10152]
gi|54017715|dbj|BAD59085.1| putative oxidoreductase [Nocardia farcinica IFM 10152]
Length = 367
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 12/94 (12%)
Query: 3 RYSFIVLCYSSLLFGCH----SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
R + V S+LL GC S+ S T P SP + D
Sbjct: 8 RVAMCVALGSALLAGCARFDDSASSPFTPEPTFSPADPRPPDQPPSSTTRPSGPCIDPDP 67
Query: 59 --------KSYSLWRDSHAALFKDSRALNVGDIL 84
+ L H AL + R + +++
Sbjct: 68 SVVATCLDTTGGLVGVGHGALVAERRTGRILEVV 101
>gi|121585594|ref|ZP_01675390.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229506176|ref|ZP_04395685.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229509966|ref|ZP_04399446.1| protein F-related protein [Vibrio cholerae B33]
gi|229516473|ref|ZP_04405920.1| protein F-related protein [Vibrio cholerae RC9]
gi|229605715|ref|YP_002876419.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255746568|ref|ZP_05420515.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262158841|ref|ZP_06029954.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
gi|121550211|gb|EAX60225.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229346354|gb|EEO11325.1| protein F-related protein [Vibrio cholerae RC9]
gi|229352411|gb|EEO17351.1| protein F-related protein [Vibrio cholerae B33]
gi|229356527|gb|EEO21445.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229372201|gb|ACQ62623.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255736322|gb|EET91720.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262029414|gb|EEY48065.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
Length = 204
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 6/153 (3%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G +++ ++
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMPNAM 59
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD-NQTGRSRNNSLHRKLSGGFSLFGQQ 122
+ A+ ++D R + + + ++ D + N T R S ++ L
Sbjct: 60 TQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVA 118
Query: 123 TPQMNGNLNYDGGGASSGKGSISRAEKLNLLIA 155
G + +EKLN +A
Sbjct: 119 R---FLATESGIDIVLEGHTDNTGSEKLNDKLA 148
>gi|330504891|ref|YP_004381760.1| hypothetical protein MDS_3977 [Pseudomonas mendocina NK-01]
gi|328919177|gb|AEB60008.1| hypothetical protein MDS_3977 [Pseudomonas mendocina NK-01]
Length = 196
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 1 MYRYSFIVLCYS--SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + I L + L GC S ++T P+++ + + + + +D + S
Sbjct: 3 MLHRALIALLAATSLTLAGCALSPQQLTPQPKLTSSLTPVGQGQPVVVRVVDGRPSPVLG 62
Query: 59 KSYSLWRDSHA 69
L+ ++ +
Sbjct: 63 TRGGLYPETSS 73
>gi|294011533|ref|YP_003544993.1| hypothetical protein SJA_C1-15470 [Sphingobium japonicum UT26S]
gi|292674863|dbj|BAI96381.1| hypothetical protein SJA_C1-15470 [Sphingobium japonicum UT26S]
Length = 94
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQM--SPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + + L + +L C E + P+ + ++E P +
Sbjct: 1 MRKLALFALAGTLVLAACGKKEEEAPMTNNLVEPPVENVIEEEPAAPTPEPSNNAAPEPA 60
Query: 59 KSYSL 63
S+
Sbjct: 61 PPPSI 65
>gi|229522237|ref|ZP_04411653.1| protein F-related protein [Vibrio cholerae TM 11079-80]
gi|229340222|gb|EEO05228.1| protein F-related protein [Vibrio cholerae TM 11079-80]
Length = 204
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 13/168 (7%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
F VLC + LL GC S +++ + + D + R P G +++ ++
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWG-YAPQKNTSVMPNAM 59
Query: 64 WRDSHAALFKDSRAL----------NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ A+ ++D R GD + + + + + ++
Sbjct: 60 TQPRSAS-YEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFEIGSAKVSMASKQWLDTVA 118
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL-IAAIVTA 160
+ + G+ + G + K + RA + + + V
Sbjct: 119 RFLAAESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVAQ 166
>gi|91218577|ref|ZP_01255510.1| alkylphosphonate ABC tranporter phosphate-binding protein
[Psychroflexus torquis ATCC 700755]
gi|91183276|gb|EAS69686.1| alkylphosphonate ABC tranporter phosphate-binding protein
[Psychroflexus torquis ATCC 700755]
Length = 373
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
M + I+LC + + C S E P + +L+
Sbjct: 2 MKKSFLILLCLALVATACGGSAEETVEEPVATEQVETLEAPATTAAP 48
>gi|317492276|ref|ZP_07950705.1| hypothetical protein HMPREF0864_01469 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919615|gb|EFV40945.1| hypothetical protein HMPREF0864_01469 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 200
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 36/145 (24%), Gaps = 10/145 (6%)
Query: 1 MYRYSFIVLCYSSLLFGC---HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + V + LL GC SE T P P +
Sbjct: 1 MMKKLLSVTFAALLLAGCQITTKQGSETTTEPAQPTQTQPPVTAPTTPVEQPPVTTVPTP 60
Query: 58 KKSYSL-WRDSHAALFK------DSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
K S W S L D A +V + V + + N T +
Sbjct: 61 PKVQSFNWSGSLTPLINQMLSSPDVAAGSVLLVDNVQNQTNGSIQVSNATAELKKALQQG 120
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGG 135
+ + + L+ +
Sbjct: 121 NKFTLVPANQVTSAKQSLGLSAEDS 145
>gi|126649409|ref|ZP_01721650.1| hypothetical protein BB14905_05713 [Bacillus sp. B14905]
gi|126593734|gb|EAZ87657.1| hypothetical protein BB14905_05713 [Bacillus sp. B14905]
Length = 175
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 22/61 (36%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ F ++ +LL GC E P++ + + L + + ++
Sbjct: 1 MKKWLFALIAVPALLVGCGEKKEEALPEPEVPQIPEVEILTPKEVPLNETIELAAHVEQG 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|242279711|ref|YP_002991840.1| hypothetical protein Desal_2245 [Desulfovibrio salexigens DSM 2638]
gi|242122605|gb|ACS80301.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 334
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 11/155 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ C L GC + + +PMG+++ + ++ +
Sbjct: 1 MKKRFLVIFCSLILASGCAPVVKTQSIPVSTNPMGATVYADGKVACTSPCTVDLPRNA-- 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
D L KD D++ + ++ + + +++S+ G + +G
Sbjct: 59 -----DHILTLKKDQ--YRQQDVIIKRVYQQEKVMMKAVSQGMQSSSMVVGSGGDKTAWG 111
Query: 121 --QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL 153
Q ++ S R L
Sbjct: 112 VMQGVNSIDSQEETGDAYILSPSAVSVRLVSLTAQ 146
>gi|170744400|ref|YP_001773055.1| polysaccharide export protein [Methylobacterium sp. 4-46]
gi|168198674|gb|ACA20621.1| polysaccharide export protein [Methylobacterium sp. 4-46]
Length = 389
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 50/173 (28%), Gaps = 15/173 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS--SLDENNRMPFLGIDFKNSDSTKK 59
R I LC + + GC S + G+ + D+ + ID S
Sbjct: 1 MRPLPIALCAALAVSGCSSFLPASGPTGSAVAEGADIATDQGLFARYEIIDVDASTVEAL 60
Query: 60 SYSLWRDSHAALFKDSRA-----LNVGDILTVDIRIDDQAVFDNQT----GRSRNNSLHR 110
A+ F D R + +GD +TV I + S +
Sbjct: 61 RGRPLDSLLAS-FGDRRPSVEPVIGIGDAVTVTIWEASTGGLFSGALVADRFSAGSKSAT 119
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRA---EKLNLLIAAIVTA 160
+ G T G + G +G I + + + + VT
Sbjct: 120 IPPQVVTRDGTITVPYAGRIQVAGKRVQDVQGQIEQELAGKAIEPQVIVTVTQ 172
>gi|108760099|ref|YP_634445.1| putative lipoprotein [Myxococcus xanthus DK 1622]
gi|108463979|gb|ABF89164.1| putative lipoprotein [Myxococcus xanthus DK 1622]
Length = 279
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 25/71 (35%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +++ L S L+ GC + S + RM + + + +
Sbjct: 14 MPRRTWMTLVVSGLVAGCAARPERYGFDSATSACRQNPAVCARMAGEEAVLPGTRALRVA 73
Query: 61 YSLWRDSHAAL 71
S+ AAL
Sbjct: 74 ASIGTAGDAAL 84
>gi|300728620|ref|ZP_07061978.1| putative lipoprotein [Prevotella bryantii B14]
gi|299774189|gb|EFI70823.1| putative lipoprotein [Prevotella bryantii B14]
Length = 236
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 32/90 (35%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + S +++ + LL GC +S + T ++S + + N + + +
Sbjct: 11 MMKNSIVIMLAALLLSGCANSNFDFTDSSELSIQENPYEIINSKTNIKYPLREDLLSPNY 70
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRI 90
++ + + D++ I
Sbjct: 71 TGGYKLNFINQSNYNHQYAAYDLIKASINQ 100
>gi|326334667|ref|ZP_08200874.1| cellulase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325693117|gb|EGD35049.1| cellulase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 362
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M +Y + SL+ C S+ E P+ P + + +
Sbjct: 1 MKKYLLFGVLIFSLIGACSSNNEENPQKPE--PKKPDPQKPEPQKQKPVAYD 50
>gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
Length = 242
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L +LL GC S I +P
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEDVIPDVPP 30
>gi|330469925|ref|YP_004407668.1| hypothetical protein VAB18032_29986 [Verrucosispora maris
AB-18-032]
gi|328812896|gb|AEB47068.1| hypothetical protein VAB18032_29986 [Verrucosispora maris
AB-18-032]
Length = 298
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 21/79 (26%), Gaps = 6/79 (7%)
Query: 1 MYRYSFIVLCYSSL---LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R F + L L GC +P G++ + +
Sbjct: 1 MIRRRFAASAVTLLLAWLTGCAPPGDPPGQP---APSGAAPQVPYAVGVRTFVVDPGSAR 57
Query: 58 KKSYSLWRDSHAALFKDSR 76
+LW + D R
Sbjct: 58 PLPVTLWYPTQGTRIADGR 76
>gi|296133198|ref|YP_003640445.1| hypothetical protein TherJR_1695 [Thermincola sp. JR]
gi|296031776|gb|ADG82544.1| hypothetical protein TherJR_1695 [Thermincola potens JR]
Length = 151
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDEN 41
M +Y I+LC + LL GC + P +P + L
Sbjct: 1 MKKYIIIILCVAFLLAGC-TGSKVPAPKPDTTPNTNHLTAQ 40
>gi|310658103|ref|YP_003935824.1| rhodanese domain-containing protein [Clostridium sticklandii DSM
519]
gi|308824881|emb|CBH20919.1| Rhodanese domain protein precursor (modular protein) [Clostridium
sticklandii]
Length = 181
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 21/194 (10%)
Query: 1 MYRYS----FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN-SD 55
M + F + S+L GC S + T P +P + P + + +
Sbjct: 1 MKKRIVALMFASVISLSILGGCASQTTPETTEP--APATEEAAQTETAPVEETEKQYITP 58
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
K + + L A + + D + N + +++ L+
Sbjct: 59 EQVKDGMSSTEDYVLLDLRKVADYEAGHINGAVSSDLDSTIANNDDETSISNIKTALTDA 118
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG--SQ 173
++ SGK +L I + + I+ G
Sbjct: 119 TGSEDGADKKLVLLC-------YSGKKYAEAGHRLLNEIGVDNSRVF-----ILEGGYKA 166
Query: 174 EVRVNDEIRSLNVT 187
+E +L VT
Sbjct: 167 WTAAGEEYENLIVT 180
>gi|223986625|ref|ZP_03636619.1| hypothetical protein HOLDEFILI_03941 [Holdemania filiformis DSM
12042]
gi|223961420|gb|EEF65938.1| hypothetical protein HOLDEFILI_03941 [Holdemania filiformis DSM
12042]
Length = 296
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHS--------SISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M R S I+L LL GC + + + P+ L++ +R ++
Sbjct: 8 MRRISRILLIAGLLLSGCQTKPKPENLYRVEDFPQADASWPLQLLLNDLHRELSPDPNWL 67
Query: 53 NSDSTKKSYSLWRD 66
+++ + + WR
Sbjct: 68 PEEASGSTQAAWRS 81
>gi|261495847|ref|ZP_05992280.1| putative lipoprotein precursor [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308528|gb|EEY09798.1| putative lipoprotein precursor [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 209
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 9/140 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK-- 58
M ++ + L GC + +++PM SL + P D S
Sbjct: 1 MKTKISLIAVFMLGLSGCVHQQNTAQNSDEITPMPDSLLKPQMQPLPPQDRIVSKDIYHE 60
Query: 59 ---KSYSLWRDSHAALF----KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+ + RD L ++ + + +++V + N R +
Sbjct: 61 QTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVPNTKNRFTANVQQGLRTTLTNTG 120
Query: 112 LSGGFSLFGQQTPQMNGNLN 131
L F G+Q +
Sbjct: 121 LELCFPPIGEQGNAVQTLFT 140
>gi|156741569|ref|YP_001431698.1| intradiol ring-cleavage dioxygenase [Roseiflexus castenholzii DSM
13941]
gi|156232897|gb|ABU57680.1| intradiol ring-cleavage dioxygenase [Roseiflexus castenholzii DSM
13941]
Length = 299
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 4 YSFIVLCYSSLLFGC-HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ + + ++LL GC ++ + + P SP+ T
Sbjct: 18 LALLGISAATLLTGCGAAAETPASNAPAASPVQPDTPATFAAQPELSPVATPAPTATP 75
>gi|134296812|ref|YP_001120547.1| RND efflux system outer membrane lipoprotein [Burkholderia
vietnamiensis G4]
gi|134139969|gb|ABO55712.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia vietnamiensis G4]
Length = 507
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 16/164 (9%), Positives = 42/164 (25%), Gaps = 16/164 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS-PMGSSLDENNRMPFLGIDFKNSDSTKK 59
M +++ + + L GC P + P + +
Sbjct: 2 MQKHALTAIAVALLATGCT-------MAPHYTRPDAPVAQAYPAGGVYATQPAAAGTRSA 54
Query: 60 SYSLWRD-SHAALFKDSRALNVGDILTVDIRIDDQ---AVFDNQTGRSRNNSLHRKL-SG 114
+ F D R + ++ + + + AV + + R++ L
Sbjct: 55 NGQAASAIGWREFFADPR---LQRLIEIALNNNRDLRVAVLNIEASRAQYQITRAGLFPT 111
Query: 115 GFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIV 158
+ ++ + S+ + L + V
Sbjct: 112 LDGTGSGNIQRYPAGVSTTRQPLITRTYSVGLSASWELDLFGRV 155
>gi|331674495|ref|ZP_08375255.1| integrating conjugative element protein PilL, PFGI-1 class
[Escherichia coli TA280]
gi|331068589|gb|EGI39984.1| integrating conjugative element protein PilL, PFGI-1 class
[Escherichia coli TA280]
Length = 200
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M S L +LL GC+S P M P+ S N P +
Sbjct: 3 MQPGSLFPLVTLALLAGCNSPQKLQQRAPAM-PVPSVSVSRNVQPVSPDIYAQPAPEVVR 61
Query: 61 YSLW 64
Y +
Sbjct: 62 YDRY 65
>gi|119898661|ref|YP_933874.1| hypothetical protein azo2370 [Azoarcus sp. BH72]
gi|119671074|emb|CAL94987.1| hypothetical secreted protein [Azoarcus sp. BH72]
Length = 134
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPM---GSSLDENNRMPFLGIDFKNSDSTK 58
+ S + LC + L C + I G P+ G + + +
Sbjct: 1 MKTSMLALCAAFTLSACSTLIGPSAGEIAALPVVSYGQPAPQGEFVLRYPAGTDLPFNAS 60
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
SL ++ + + DI ++ + G
Sbjct: 61 VGGSLLTEAAQSTL---KVRVKQDIYVYKDKLSFDGKTWSAARSKIGGEFRISPPGMKD- 116
Query: 119 FGQQTPQMNGNLNY 132
GQ PQ G ++
Sbjct: 117 -GQIDPQAPGEMSA 129
>gi|315634488|ref|ZP_07889773.1| conserved hypothetical protein [Aggregatibacter segnis ATCC
33393]
gi|315476715|gb|EFU67462.1| conserved hypothetical protein [Aggregatibacter segnis ATCC
33393]
Length = 141
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 20/63 (31%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ S++L GC + + + P L + P D+ +
Sbjct: 1 MKKLLLIGIISAVLSGCAGTSPVVLQQAKQVPPERILAQGEYNPNYAKVTIVRDAGFQGG 60
Query: 62 SLW 64
+
Sbjct: 61 GCY 63
>gi|258541525|ref|YP_003186958.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-01]
gi|256632603|dbj|BAH98578.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-01]
gi|256635660|dbj|BAI01629.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-03]
gi|256638715|dbj|BAI04677.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-07]
gi|256641769|dbj|BAI07724.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-22]
gi|256644824|dbj|BAI10772.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-26]
gi|256647879|dbj|BAI13820.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-32]
gi|256650932|dbj|BAI16866.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653923|dbj|BAI19850.1| beta-N-acetylhexosaminidase [Acetobacter pasteurianus IFO 3283-12]
Length = 747
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 40/128 (31%), Gaps = 18/128 (14%)
Query: 1 MYRYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + I + L GC ++ + P + ++ P + ++ +
Sbjct: 1 MIKGFSIRIGLRVLAAGCAIGVLASLGAYPAPAKADTTPPAAFNAPRSPVIMPAPNTLQT 60
Query: 60 SYS----------LWRDSHAAL-------FKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
S +W++ L F + ++ G +T++ D+ F
Sbjct: 61 DGSAFALPANWQVIWQNPPTPLLTRATQRFANRMSIVAGQAVTLENAGKDKDTFPLHIQY 120
Query: 103 SRNNSLHR 110
+R +
Sbjct: 121 AREATFPA 128
>gi|254695209|ref|ZP_05157037.1| TraI protein [Brucella abortus bv. 3 str. Tulya]
gi|261215572|ref|ZP_05929853.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917179|gb|EEX84040.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
Tulya]
Length = 57
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 15/51 (29%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
+ + ++ L GC +++ + + P P L
Sbjct: 1 MKKVILAFVATAFLAGCTTTVPAVVPVLDGKPRVPVNKSVPAKPPLAQPNP 51
>gi|304397156|ref|ZP_07379035.1| RND efflux system, outer membrane lipoprotein, NodT family
[Pantoea sp. aB]
gi|304355305|gb|EFM19673.1| RND efflux system, outer membrane lipoprotein, NodT family
[Pantoea sp. aB]
Length = 461
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 13/47 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
M R +V L GC + + + + + P
Sbjct: 1 MMRRGLLVSALMLALTGCATQVEKAPSSLPIPAAWRNSVGPAAAPEA 47
>gi|305682126|ref|ZP_07404930.1| putative blue copper oxidase CueO [Corynebacterium matruchotii
ATCC 14266]
gi|305658599|gb|EFM48102.1| putative blue copper oxidase CueO [Corynebacterium matruchotii
ATCC 14266]
Length = 542
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS 36
M R F+ LC + L C S G P+
Sbjct: 1 MNRRHFLALCAALGLTACAPKTSNPDGPTSNEPVIP 36
>gi|225023005|ref|ZP_03712197.1| hypothetical protein CORMATOL_03053 [Corynebacterium matruchotii
ATCC 33806]
gi|224944228|gb|EEG25437.1| hypothetical protein CORMATOL_03053 [Corynebacterium matruchotii
ATCC 33806]
Length = 542
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS 36
M R F+ LC + L C S G P+
Sbjct: 1 MNRRHFLALCAALGLTACAPKTSNPDGPTSNEPVIP 36
>gi|187925229|ref|YP_001896871.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia phytofirmans PsJN]
gi|187716423|gb|ACD17647.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia phytofirmans PsJN]
Length = 525
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 17/61 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S I + + GC + P + + + P ++
Sbjct: 1 MQKHSLIAVAVALFAAGCTMAPKYERPAPPTTSTFPTGGVYDTQPGATQPGAGQTDATQT 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|167587443|ref|ZP_02379831.1| hypothetical protein BuboB_19013 [Burkholderia ubonensis Bu]
Length = 57
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGI-PQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R+ VL +S+L GC S + P P + P + S +
Sbjct: 1 MTRFVLAVL-AASILAGCASDPRQARRGHPPQDPADYHGVPTDMTPPSMLAEPPSATQ 57
>gi|114328977|ref|YP_746134.1| hypothetical protein GbCGDNIH1_2313 [Granulibacter bethesdensis
CGDNIH1]
gi|114317151|gb|ABI63211.1| hypothetical protein GbCGDNIH1_2313 [Granulibacter bethesdensis
CGDNIH1]
Length = 342
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 50/215 (23%), Gaps = 23/215 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R F + ++ +L C S + ++G + M
Sbjct: 1 MIRLPFCLSRFTLMLT-CLSGLLGLSGCGDLPRPFMGHPGQTAMKLAAPPPARLAVPTPG 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIR---------IDDQAVFDNQTGRSRNNSLHRK 111
+L D + LF S A + D + + A T
Sbjct: 60 NALLDDDSSKLFATSIAHALDDHTVPAVAGPVKKGDWWLGITATTQGNTVVPHYEVFDPT 119
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISG 171
GQ P S + L + A + N
Sbjct: 120 GKSHGKADGQSMPASVWAAGDRPMLKQEALTSADKISDLLNDVDAAMKQSDPN------- 172
Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKI 206
N R + GI P D N ++
Sbjct: 173 ---SLFNRPARVAVLDGIGAPGD---GNMALSMQM 201
>gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9]
gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 242
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L ++L GC S+ + +P
Sbjct: 1 MKRLTITTLLAVAILSGCSSTEEVVPDVPP 30
>gi|313158486|gb|EFR57880.1| putative lipoprotein [Alistipes sp. HGB5]
Length = 312
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISE-ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R + IV+ ++ C + SE T P +P+ + + N + + F +
Sbjct: 1 MKRIALIVIGFAIFAMSCQTQESESATNFPSETPLQAGAEHNLYLQEILNYFGENPDVMT 60
Query: 60 SYS 62
S
Sbjct: 61 RAS 63
>gi|227822671|ref|YP_002826643.1| putative glycosyl hydrolase/lysozyme [Sinorhizobium fredii
NGR234]
gi|227341672|gb|ACP25890.1| putative glycosyl hydrolase/lysozyme [Sinorhizobium fredii
NGR234]
Length = 259
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG 48
M R +L +++L C S+ ++ + P D +
Sbjct: 1 MRRLLLALLPIATILSACTSTDYDLVRTASIPPRFQDTDPQDFGGRTP 48
>gi|256380741|ref|YP_003104401.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827]
gi|255925044|gb|ACU40555.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827]
Length = 381
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 41/171 (23%), Gaps = 15/171 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP---QMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + +L +LL GC S++ + + P P+
Sbjct: 1 MRKKLAALLVGGALLVGCSSNVEQGSPSPVGGDSPPVAKLTANPADGAKDVPVNSPVKVE 60
Query: 58 KKSYSLWRDS---------HAALFKDSRALNVGDILTV--DIRIDDQAVFDNQTGRSRNN 106
+ ++ + + AL +D R+ + L +A +
Sbjct: 61 VQDGAIDQVAVTNPEGQSVKGALAEDKRSWASTEPLGFGKQYSYSGKATGSDGKPVELTG 120
Query: 107 SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
S + P + + + + +
Sbjct: 121 SFTTLAPASQ-VRATLFPGDDQVMGVAVPIKVEFDVDVQDKATVEKALTVT 170
>gi|87198960|ref|YP_496217.1| hypothetical protein Saro_0938 [Novosphingobium aromaticivorans
DSM 12444]
gi|87134641|gb|ABD25383.1| hypothetical protein Saro_0938 [Novosphingobium aromaticivorans
DSM 12444]
Length = 75
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
MYR IV L GC S+ +E P LD G + D T+++
Sbjct: 1 MYRLRLIVTALGLALSGCGSAPAE--------PEHPPLDPVMAEALQGQLMVDPDLTQQN 52
>gi|319788617|ref|YP_004148092.1| peptidyl-dipeptidase Dcp [Pseudoxanthomonas suwonensis 11-1]
gi|317467129|gb|ADV28861.1| Peptidyl-dipeptidase Dcp [Pseudoxanthomonas suwonensis 11-1]
Length = 717
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 14/57 (24%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R + + L C + +P +P S + +
Sbjct: 1 MLRKLLLSSAIAVALTACGDRSANENAMPDSNPPASGAAQGDNALLAASTLPFQAPP 57
>gi|73538078|ref|YP_298445.1| hypothetical protein Reut_B4248 [Ralstonia eutropha JMP134]
gi|72121415|gb|AAZ63601.1| hypothetical protein Reut_B4248 [Ralstonia eutropha JMP134]
Length = 121
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPF--LGIDFKNSDSTK 58
M R S++ L ++ LL C + + T + + +
Sbjct: 1 MSRASYLCLAFALLLSACETPPQQATRPAPRQAAEPRIAPRVAIDACEQAVTANVRKGHP 60
Query: 59 KSYSLW 64
+ SL+
Sbjct: 61 EPGSLF 66
>gi|261379563|ref|ZP_05984136.1| conserved hypothetical protein [Neisseria subflava NJ9703]
gi|284798037|gb|EFC53384.1| conserved hypothetical protein [Neisseria subflava NJ9703]
Length = 209
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENN-RMPFLGIDFKNSDSTKK 59
M + ++LC + L C + P S +++ ++P + ++
Sbjct: 9 MNK--LLILCSALALSAC------VVPHPYTSTEYQKYKQSDLKVPNQPYPIRLEGEFER 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + + AL K ++ + + V + Q N L
Sbjct: 61 NGKSFPKVNPALTKAAK-IALNGTKIVTVDPQAQNSLKIHANNIANIGGAVGNGIKTGLT 119
Query: 120 GQQTPQMNGNLNYDGGGASSGKGSISRAE-----KLNLLIAAIVTAILENGNL---IISG 171
+ S GK ++R+E + + + + + NL IS
Sbjct: 120 FGLAGSTVQDYYQFYCSYSDGKKELNRSEFNHAIVTTIGLTSTPKELTPHSNLDQAFISV 179
Query: 172 SQEVRVN 178
++++ VN
Sbjct: 180 TKDIVVN 186
>gi|322421668|ref|YP_004200891.1| surface antigen (D15) [Geobacter sp. M18]
gi|320128055|gb|ADW15615.1| surface antigen (D15) [Geobacter sp. M18]
Length = 410
Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 8/119 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + L SLL GC S + T +P SP + + N T +
Sbjct: 1 MRALLPLSLIVLSLLAGCTSYLP-ATVVPAPSPAQPYVKVVTIPLPVIATSPNEGVTYGA 59
Query: 61 YSLW-----RDSHAALFKDS--RALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+ + +D +ALF R N G T+ I + + S+++ ++
Sbjct: 60 LTAFLLHNDKDEVSALFAPQVNRNENFGTTGTLYGAIYPSPLQSTEFNLSKSSKVNYDF 118
>gi|225850883|ref|YP_002731117.1| putative lipoprotein [Persephonella marina EX-H1]
gi|225645047|gb|ACO03233.1| putative lipoprotein [Persephonella marina EX-H1]
Length = 483
Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Query: 1 MYRYSFIVLCYSSLLFGC--HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M ++ I L S + C + + + I + + ++ +
Sbjct: 1 MKKWMPIFLLTSFFISSCGTSTKQASVEQIQKFQQSSAVAQLLYKLNNIKKVPTYLPKDA 60
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDI 88
S LW D + R + ++LT+ +
Sbjct: 61 HSGYLWSDGYTFWINRKRTDHWIEMLTLYL 90
>gi|220929023|ref|YP_002505932.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Clostridium cellulolyticum H10]
gi|219999351|gb|ACL75952.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Clostridium cellulolyticum H10]
Length = 263
Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 15/210 (7%)
Query: 1 MY-RYS-FIVLCYSSLLFGCHSSISEITGIPQMSPMG--------SSLDENNRMPFLGID 50
M R IV+ + L GC S + I + + E + +
Sbjct: 1 MKCRLLPLIVILAAFSLAGCTSKVETPKEIKVFAAASLTECFGELAKEFEQQEAGAVKVV 60
Query: 51 FKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ S S+ ++A +F + + ++ + I D + N +N +
Sbjct: 61 LNFAGSQALVTSIENGANADIFAVASVNYMDNLKSKKIIKDYKIFAKNSLVLIKNRKNNI 120
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGK-GSISRAEKLNLLIAAIVTAILENGNLII 169
+S L T G+ G + E + + + +++ L +
Sbjct: 121 SISKFSDLAADGTKIAVGDSKIPVGMYWKKACEDALKKENITEKLNIKIQQNVKSRELSV 180
Query: 170 SGSQEVRVNDEIRSLNVTGIVRPQDVDAHN 199
+ +E+ G+V D+ + N
Sbjct: 181 KDIVSKVLVNEVDI----GVVYRTDITSAN 206
>gi|330826235|ref|YP_004389538.1| PDZ/DHR/GLGF domain-containing protein [Alicycliphilus
denitrificans K601]
gi|329311607|gb|AEB86022.1| PDZ/DHR/GLGF domain protein [Alicycliphilus denitrificans K601]
Length = 295
Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R FI+L S +L GC + + S P + +
Sbjct: 27 MIRKFFILLAISIMLGGCANGYKQFYKPANGVTPESIARMRANPPPETPLVERIPPI--N 84
Query: 61 YSLWRDSHA 69
S D+++
Sbjct: 85 GSAAMDAYS 93
>gi|329908772|ref|ZP_08274950.1| Phospholipase/lecithinase/hemolysin [Oxalobacteraceae bacterium
IMCC9480]
gi|327546605|gb|EGF31575.1| Phospholipase/lecithinase/hemolysin [Oxalobacteraceae bacterium
IMCC9480]
Length = 355
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 40/156 (25%), Gaps = 7/156 (4%)
Query: 1 MYRYSF-IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M ++ + ++L GC + PQ S + S D + N +
Sbjct: 1 MQQFKLSAAVLSLAVLAGCGGGSTGSPSKPQFSAVISFGDSLSDAGSYAPATINPATGLP 60
Query: 60 SYSLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + + +D A L + I + + + G
Sbjct: 61 TGGKFTTNPGPIWIEDIAAK-----LNLTITPNVVGYATTSVTCPKTSCTAYGQGGSRVT 115
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
G L + + + K L+
Sbjct: 116 SINGIGHDTGALTIPMKTQMDNHLAANASYKPTDLV 151
>gi|293372376|ref|ZP_06618760.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f]
gi|292632559|gb|EFF51153.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f]
Length = 1021
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 16/206 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R +L C +SI ++ + + N +P + + K+ D+ +
Sbjct: 1 MRRKIHFLLFLFL----CMASIPLAAQDIEVKGVVTEATTNEPLPGVTVRVKDKDTGTIT 56
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ D ++ V + + +++ +
Sbjct: 57 DA---DGKYSIKAGKGNTLVFSTIGMKQIERAVTSGAPINVTMEEDNIALEQVVVIGYGT 113
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI---AAIVTAILENGNLIISGSQEVRV 177
+ ++G + +G+ + + A L I + ++ NG++ I+ +
Sbjct: 114 VKKSHLSGAVGSVSAKELNGQVASNAATALQGKIPGVSVASSSGDPNGSMTINVRGISSL 173
Query: 178 NDEIRSLNVTG------IVRPQDVDA 197
++ + G +V P D+ +
Sbjct: 174 SNNDPLYVIDGSFGDISMVDPNDITS 199
>gi|148254792|ref|YP_001239377.1| putative conjugal transfer protein TrbG [Bradyrhizobium sp.
BTAi1]
gi|146406965|gb|ABQ35471.1| putative conjugal transfer protein trbG [Bradyrhizobium sp.
BTAi1]
Length = 315
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M S LL GC + EI ++ P+ ++ + P
Sbjct: 1 MNGRILTATALSFLLSGCATSKPPEIRYDAEVPPLPAAPVTVDDRPRALHVPPP 54
>gi|82751082|ref|YP_416823.1| lipoprotein [Staphylococcus aureus RF122]
gi|82656613|emb|CAI81037.1| probable lipoprotein [Staphylococcus aureus RF122]
Length = 304
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 24/54 (44%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E ++ P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKLVPEEMEASKYVGQGFQPPAEKDA 54
>gi|326315289|ref|YP_004232961.1| hypothetical protein Acav_0471 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372125|gb|ADX44394.1| Protein of unknown function DUF3016 [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 213
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY---SL 63
+ L + LL GC + Q + + + P +Y +
Sbjct: 23 VALVLACLLAGCAGTPGSAPAPAQDAAAVPARRDGPPAPSRAKGPPPPGIVSVTYDDPAG 82
Query: 64 WRDSHAALFKDSRALNVG-DILTVDIRIDDQAVF 96
+ D+ + + RA D L + + A
Sbjct: 83 FSDARRGVHEADRARRAWVDALCLYLSETAAAAL 116
>gi|251789657|ref|YP_003004378.1| hypothetical protein Dd1591_2053 [Dickeya zeae Ech1591]
gi|247538278|gb|ACT06899.1| conserved hypothetical protein [Dickeya zeae Ech1591]
Length = 605
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 10/185 (5%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R S + +LL GC + +T Q++ S +
Sbjct: 29 RRLSLAIALTCALLAGCAVAPEPMTAQEQVAQAMSDRSRMFADQEPVRGTVTLEEAIARA 88
Query: 62 SLWR-DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ AL + + ++ D+ +D+ A QT + S + ++ G
Sbjct: 89 LKYNLSQRVALMEQAMEDDLRDVARLDMLPKLAARAGLQTRDNVAASSSQSITTGRQSLE 148
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDE 180
T Q + + N D + L+ I+ + + N L + V D
Sbjct: 149 ASTSQDHTSRNGDLTLSW---------NVLDFGISYVNARMQANKTLAAEERRRKVVADI 199
Query: 181 IRSLN 185
R +
Sbjct: 200 TRQVR 204
>gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
Length = 242
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQ 30
M R + L ++L GC S+ + IP
Sbjct: 1 MKRLTITTLLAVAILSGCSSTEEVVPDIPP 30
>gi|10441409|gb|AAG17025.1|AF186846_2 OspB [Borrelia bissettii]
Length = 265
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 41/150 (27%), Gaps = 12/150 (8%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK--SY 61
+ + L GC + P+ +P + + D K + T +
Sbjct: 2 RLLLGFALTLALIGCA----QKGAEPKNTPQKYNDQKLIDSSKAPKDAKQTLPTVAEDTV 57
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
SL+ + L K+ + D+ T+ DQ + +NN
Sbjct: 58 SLFSGNEIFLSKEKNSSGKYDLRTII----DQVELKGTSD--KNNGSGSLEGVKADKSKV 111
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLN 151
+ + S IS +
Sbjct: 112 KLTVSDDLNTITVETFDSSGKKISSKVTVK 141
>gi|78188838|ref|YP_379176.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium
chlorochromatii CaD3]
gi|78171037|gb|ABB28133.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium
chlorochromatii CaD3]
Length = 511
Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 46/152 (30%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ L + +L GC SS + + ++ + ++ + +
Sbjct: 30 MKKIIWLALPTAIVLAGCSSSHTLQSPTIALNDRYQQNSAHPQLTEAEGQQQQLVVESVA 89
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
W + ++ T+ + N++L+ +L S
Sbjct: 90 ARWWEAFGSPKLNRLIEQSLKQNPTLAAAEATLRQAEALANAKYNSTLYPRLDAVGSAQR 149
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNL 152
Q + + GS+S + +L
Sbjct: 150 LQLNNSRNGVEGGEKRFNLYNGSLSSSYNFDL 181
>gi|325272325|ref|ZP_08138730.1| hypothetical protein G1E_05455 [Pseudomonas sp. TJI-51]
gi|324102552|gb|EGB99993.1| hypothetical protein G1E_05455 [Pseudomonas sp. TJI-51]
Length = 342
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Query: 6 FIVLCYSSLLFGCHS---SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
+ L LL GC S G Q+ +++ P + +
Sbjct: 1 MVPLLAVLLLSGCSSAAYYGQLAQGQWQLLRARQPVEQVVADPATPPLLRARLQRAEQAR 60
Query: 63 LWRDSHAALFKDSRALNVG 81
+ L D+R+ V
Sbjct: 61 AFASQQLKL-PDNRSYRVY 78
>gi|167585906|ref|ZP_02378294.1| PRC-barrel domain protein [Burkholderia ubonensis Bu]
Length = 318
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 16/53 (30%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
+F + + LL GC ++ P + ++E P
Sbjct: 18 TFFPILAAVLLSGCGLLPTQNPPAPISEALVEPVEETAGEPLTMPPVPAPVRP 70
>gi|37679247|ref|NP_933856.1| hypothetical protein VV1063 [Vibrio vulnificus YJ016]
gi|37197990|dbj|BAC93827.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 397
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 5/129 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + + +L C S S P ++P + ++ P N
Sbjct: 1 MKKLTLVS-ALTLVLSACGGSNSSTPAQPDVAPKTITGTIDSVDPQHRSLVVNGHQYTVE 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
+ ++ L AL ++ + Q + + + L ++G S
Sbjct: 60 QVSYSSANIELS----ALQPNMMIRIAPNSSVQRDSASGQADTFSAQLEPTMTGVISNIN 115
Query: 121 QQTPQMNGN 129
+ N
Sbjct: 116 PTDHTFSIN 124
>gi|329956044|ref|ZP_08296815.1| SusD family protein [Bacteroides clarus YIT 12056]
gi|328524803|gb|EGF51857.1| SusD family protein [Bacteroides clarus YIT 12056]
Length = 622
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 17/130 (13%)
Query: 1 MYRYSFIVL-CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M +Y F +L + ++ GC S + P+ + + + L ++
Sbjct: 1 MKKYIFALLSAATFIISGCDSVLERPVLT---KPLDETYGKTDTEYRLYVNEAYPVYFVG 57
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
S W ++A L R N D D A QT R L
Sbjct: 58 YNSSWGSAYAPL----RGYNFSD---------DNASSGKQTSFENTIPTSRGSYNTSDLA 104
Query: 120 GQQTPQMNGN 129
Q
Sbjct: 105 NSWITQYAAG 114
>gi|313898631|ref|ZP_07832166.1| putative lipoprotein [Clostridium sp. HGF2]
gi|312956515|gb|EFR38148.1| putative lipoprotein [Clostridium sp. HGF2]
Length = 145
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQM 31
M ++ V C LL GC + + E + Q+
Sbjct: 1 MKKFILSVFCCMLLLTGCSNKVQEKGKVQQI 31
>gi|261408598|ref|YP_003244839.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261285061|gb|ACX67032.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 436
Score = 36.6 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 12/115 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++L LL C S +E + + D
Sbjct: 1 MKKLMSLLLAGVVLLSACSSGGTEGGSDSTGNSGNEGSAGITEITVWAWDPA-------- 52
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ + + K++ A D +T+++ + QA + N+ + L
Sbjct: 53 ---FNIAAMNVAKEAYAQVNPD-VTINVVENAQADIVQKLNTGLNSGSTKGLPNI 103
>gi|328474648|gb|EGF45453.1| hypothetical protein VP10329_18135 [Vibrio parahaemolyticus 10329]
Length = 192
Score = 36.6 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 12/149 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITG---IPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R + + L GC S+ +P+ S+ P L I S
Sbjct: 1 MKRVFLLATALITGLTGCSSAPEATGALYLLPKAETKTSNQMSVAERPLLVIRPAQLASY 60
Query: 58 KKSYSL-WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF 116
S+ +R S+ + + R I + + +++ +++
Sbjct: 61 LNDNSIVYRTSNTQIVQAKRHQWAQS-----ISEQITQRIVAELRQKQSDYWPVEMNNLL 115
Query: 117 SLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
G+ Q++ N G+ G I
Sbjct: 116 DQSGESKLQLSLN---KFNGSYQGNAEIE 141
>gi|294142494|ref|YP_003558472.1| curli production assembly/transport component CsgG [Shewanella
violacea DSS12]
gi|293328963|dbj|BAJ03694.1| curli production assembly/transport component CsgG, putative
[Shewanella violacea DSS12]
Length = 259
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 67/234 (28%), Gaps = 34/234 (14%)
Query: 1 MYRYSFIVLCYSSLLFGCH--SSISEITGIPQMSPMGSSLD--ENNRMPFLGIDFKNSDS 56
M + I C LL C +++P+ ++ + P I
Sbjct: 1 MKK--LISYCGLLLLSACSLIPKPELNVTKAEINPVSQTMRALQAKPGPKYPIPVAVYSF 58
Query: 57 TKKSYSLWRDSHAALFKDSRALNVGDILTVDIRI----------------DDQAVFDNQT 100
++ + + F + +L + ++ + Q
Sbjct: 59 RDQTGQYKPQQNVSSFSTAVTQGATSMLIQTLLESKWFTPVEREGLQNLLTERKISKKQP 118
Query: 101 GRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTA 160
+S++ + + L G G G G+ + + I
Sbjct: 119 LKSKDAKVPLLTNARLLLEGGIISYETNISTGGAGVEYYGIGASEMYREDQVTIYLRAVD 178
Query: 161 ILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYG 214
+ ++ + + + E+R G++R + N ++AEA I +
Sbjct: 179 VHTGKVMMSVSTTKRVFSQEMR----AGLIR---FTSLN-----RLAEAEIGFT 220
>gi|213579818|ref|ZP_03361644.1| putative hemolysin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 58
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
++++I L LL C SS P++ + + + + +
Sbjct: 1 MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQGGTLMPVQTPQGVRS 58
>gi|218782368|ref|YP_002433686.1| hypothetical protein Dalk_4540 [Desulfatibacillum alkenivorans
AK-01]
gi|218763752|gb|ACL06218.1| hypothetical protein Dalk_4540 [Desulfatibacillum alkenivorans
AK-01]
Length = 114
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 14/88 (15%)
Query: 1 MYRYSFIVLCYSS-LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M + S IVL + GC + + MSP + ++ + +
Sbjct: 1 MKKLSLIVLALVLAMAVGCANVQQAANDVQNMSPK-------AKATWMMSMYNTAYDDYA 53
Query: 60 SYSLWRDSHAALFKDSRA--LNVGDILT 85
++ S + +D R D+LT
Sbjct: 54 ----FQASAMDISEDKRTVLRVKHDVLT 77
>gi|93004817|ref|YP_579268.1| hypothetical protein Pcryo_2505 [Psychrobacter cryohalolentis K5]
gi|92395379|gb|ABE76282.1| hypothetical protein Pcryo_2505 [Psychrobacter cryohalolentis K5]
Length = 107
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ + L L C S E + S M + I D
Sbjct: 12 NKLWIVFLVSFFGLSACSSETEEPAPNTESSEMTP--VQTATEAEDQIPASTEDVEGAGG 69
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRID 91
+ + S+ ++ D +A D +TV+
Sbjct: 70 TAYYSSNGSVENDQKA---DDTVTVNENNS 96
>gi|305680496|ref|ZP_07403304.1| putative lipoprotein [Corynebacterium matruchotii ATCC 14266]
gi|305660027|gb|EFM49526.1| putative lipoprotein [Corynebacterium matruchotii ATCC 14266]
Length = 110
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M + +++ L GC G + P+ + R+P L + ST
Sbjct: 1 MMKRLVLLVVLCGALAGCG-----EPGSAKEKPVEQVIPPLGRLPELPQSYTPPPST 52
>gi|289810802|ref|ZP_06541431.1| flagellar basal body L-ring protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 50
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 65 RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
+ LF+D R N+GD LT+ ++ + A + SR+
Sbjct: 8 NYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDG 49
>gi|118618057|ref|YP_906389.1| lipoprotein LpqB [Mycobacterium ulcerans Agy99]
gi|147648342|sp|A0PRE9|LPQB_MYCUA RecName: Full=Lipoprotein lpqB; Flags: Precursor
gi|118570167|gb|ABL04918.1| conserved lipoprotein LpqB [Mycobacterium ulcerans Agy99]
Length = 586
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M R F ++ + LL GC S S + + N P G+D
Sbjct: 1 MVRSVFALVFAAVLLGGCASVPSSSAPQ-AIGTVERPAPSNLPKPIPGMDPD 51
>gi|160887966|ref|ZP_02068969.1| hypothetical protein BACUNI_00370 [Bacteroides uniformis ATCC
8492]
gi|317478640|ref|ZP_07937796.1| hypothetical protein HMPREF1007_00912 [Bacteroides sp. 4_1_36]
gi|156862465|gb|EDO55896.1| hypothetical protein BACUNI_00370 [Bacteroides uniformis ATCC
8492]
gi|316905202|gb|EFV27000.1| hypothetical protein HMPREF1007_00912 [Bacteroides sp. 4_1_36]
Length = 289
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP 33
M + F + ++ LL C + EI+ P ++P
Sbjct: 5 MKKILFAIPLFAMLLVACDPIVDEISPDPNVTP 37
>gi|110805119|ref|YP_688639.1| hypothetical protein SFV_1125 [Shigella flexneri 5 str. 8401]
gi|110614667|gb|ABF03334.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 193
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|322835502|ref|YP_004215528.1| RND efflux system, outer membrane lipoprotein, NodT family
[Rahnella sp. Y9602]
gi|321170703|gb|ADW76401.1| RND efflux system, outer membrane lipoprotein, NodT family
[Rahnella sp. Y9602]
Length = 457
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 54/193 (27%), Gaps = 35/193 (18%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ ++ + LL GC S + +P+ + P +
Sbjct: 1 MIFRLSIISLAMLLAGCISLDPDYQRPA--APVPAVWPAQGAQPAATTVLSDWQGIMADA 58
Query: 62 SLWR-------------------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
L ++ AL+ + RA + A R
Sbjct: 59 RLNAVVAKALTSNRDLQEAIADIEAAKALYGEQRA---------SLFPTLDAELSQTRSR 109
Query: 103 SRNN--SLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNL---LIAAI 157
+++ S G S F N +L+ S ++ +L L A
Sbjct: 110 TQDAGVSSSATADGAVSSFEIDLFGRNRSLSTAAKETWLASESTAQNTRLTLISETSTAW 169
Query: 158 VTAILENGNLIIS 170
+T +N NL ++
Sbjct: 170 ITLAADNSNLKLA 182
>gi|223983511|ref|ZP_03633696.1| hypothetical protein HOLDEFILI_00977 [Holdemania filiformis DSM
12042]
gi|223964506|gb|EEF68833.1| hypothetical protein HOLDEFILI_00977 [Holdemania filiformis DSM
12042]
Length = 227
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L+ GC + + P S+L E + T
Sbjct: 1 MKNRILLSVLCVLLIGGCAAQPQTPPASDDL-PAPSALPEKTIPQSALMSESPISPTNLD 59
Query: 61 YSLWRDSHAALFKDSR 76
L+ D L+ D R
Sbjct: 60 DYLFLDDV--LYFDLR 73
>gi|183981323|ref|YP_001849614.1| lipoprotein LpqB [Mycobacterium marinum M]
gi|183174649|gb|ACC39759.1| conserved lipoprotein LpqB [Mycobacterium marinum M]
Length = 592
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M R F ++ + LL GC S S + + N P G+D
Sbjct: 7 MVRSVFALVFAAVLLGGCASVPSSSAPQ-AIGTVERPAPSNLPKPIPGMDPD 57
>gi|160332377|sp|Q9NYI0|PSD3_HUMAN RecName: Full=PH and SEC7 domain-containing protein 3; AltName:
Full=Exchange factor for ADP-ribosylation factor guanine
nucleotide factor 6; AltName: Full=Hepatocellular
carcinoma-associated antigen 67; AltName:
Full=Pleckstrin homology and SEC7 domain-containing
protein 3
Length = 1048
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 97 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 149
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 150 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKTLPAGQ----KNLPEIPLSAEVTT 205
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 206 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 236
>gi|167770028|ref|ZP_02442081.1| hypothetical protein ANACOL_01370 [Anaerotruncus colihominis DSM
17241]
gi|167667862|gb|EDS11992.1| hypothetical protein ANACOL_01370 [Anaerotruncus colihominis DSM
17241]
Length = 249
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 33/166 (19%)
Query: 1 MYRYSFIVLCYSSLL-FGC--HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R + L GC ++ S +P S SS+DE + + +
Sbjct: 1 MKRLLTAFMAACLFLTAGCGAGTAPSAAEDVPAPSAAASSMDETASSRAADAASQAAGAP 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ S S D+ A T++I +T + +L G+
Sbjct: 61 EGSGS----------ADAGA-------TIEIDDSQAPTASWETQTFTSGPFTFELPAGWK 103
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILE 163
+G + + + + + +V I+
Sbjct: 104 EYGDMG-------------SYTAMFFTDASVDIASQPSNVVVEIMP 136
>gi|118486051|gb|ABK94869.1| unknown [Populus trichocarpa]
Length = 437
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 48 GIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
+ + S S++ + LF SR+++ ++ + + +F+ + + S
Sbjct: 190 PQELMPTPPKPSSGSMFSNGTTGLFGGSRSMSP----SLQLNANSSTIFEGNGLHNLSGS 245
Query: 108 LHRKLSGGFSLFGQQTPQMNGN 129
+ Q + N
Sbjct: 246 ASMSATALLQKAAQMGATASSN 267
>gi|117606360|ref|NP_056125.3| PH and SEC7 domain-containing protein 3 isoform a [Homo sapiens]
gi|317040168|gb|ADU87649.1| epididymis tissue sperm binding protein Li 20mP [Homo sapiens]
Length = 1047
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 97 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 149
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 150 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKTLPAGQ----KNLPEIPLSAEVTT 205
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 206 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 236
>gi|154173936|ref|YP_001407553.1| outer membrane lipoprotein [Campylobacter curvus 525.92]
gi|112803874|gb|EAU01218.1| outer membrane lipoprotein [Campylobacter curvus 525.92]
Length = 224
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 12/160 (7%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ C+ +LL GC + S P+++ G+ + +G N+ S+ ++ ++ D
Sbjct: 11 LAGCFIALLAGCATESSRTIEAPKVASFGTPYNGTKVAVSIGRF--NNQSSYQNG-IFSD 67
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAV---FDNQTGRSRNNSLHRKLSGGFSLFGQQT 123
+D IL D++ + N +++++K T
Sbjct: 68 G-----EDRLGNQAQSILMTDLQQSGRFSVLDRTNMKAIKEESAINKKAQNLKGAKYVIT 122
Query: 124 PQMNG-NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ G G + + + V A+
Sbjct: 123 GDVTEFGRKTTGDHQLFGILGKGKTQTAYAKVNLNVVAVD 162
>gi|270295655|ref|ZP_06201856.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274902|gb|EFA20763.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 285
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSP 33
M + F + ++ LL C + EI+ P ++P
Sbjct: 1 MKKILFAIPLFAMLLVACDPIVDEISPDPNVTP 33
>gi|24112510|ref|NP_707020.1| hypothetical protein SF1109 [Shigella flexneri 2a str. 301]
gi|24051400|gb|AAN42727.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
Length = 194
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 5 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 62
>gi|28898793|ref|NP_798398.1| hypothetical protein VP2019 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839716|ref|ZP_01992383.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260364134|ref|ZP_05776840.1| putative lipoprotein [Vibrio parahaemolyticus K5030]
gi|260877217|ref|ZP_05889572.1| putative lipoprotein [Vibrio parahaemolyticus AN-5034]
gi|260897837|ref|ZP_05906333.1| putative lipoprotein [Vibrio parahaemolyticus Peru-466]
gi|260901534|ref|ZP_05909929.1| putative lipoprotein [Vibrio parahaemolyticus AQ4037]
gi|28807012|dbj|BAC60282.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746769|gb|EDM57757.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308087641|gb|EFO37336.1| putative lipoprotein [Vibrio parahaemolyticus Peru-466]
gi|308090326|gb|EFO40021.1| putative lipoprotein [Vibrio parahaemolyticus AN-5034]
gi|308110917|gb|EFO48457.1| putative lipoprotein [Vibrio parahaemolyticus AQ4037]
gi|308115231|gb|EFO52771.1| putative lipoprotein [Vibrio parahaemolyticus K5030]
Length = 192
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITG---IPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R + + L GC S+ +P+ S+ P L I S
Sbjct: 1 MKRVFLLATALVTGLTGCSSAPETTGALYLLPKAETKTSNQMSVAERPLLVIRPAQLASY 60
Query: 58 KKSYSL-WRDSHAALFKDSR---ALNVGDILTVDIRIDDQAVFD 97
S+ +R S + + R A ++ + +T + + +
Sbjct: 61 LNDNSIVYRTSDTQIVQAKRHQWAQSISEQITQRVVAELRQKQS 104
>gi|103485729|ref|YP_615290.1| hypothetical protein Sala_0233 [Sphingopyxis alaskensis RB2256]
gi|98975806|gb|ABF51957.1| hypothetical protein Sala_0233 [Sphingopyxis alaskensis RB2256]
Length = 102
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP 29
M R + L + LL GC S++ + P
Sbjct: 1 MMRALILPLMAAPLLAGCVSTVKSVVTAP 29
>gi|290243131|ref|YP_003494801.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288945636|gb|ADC73334.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 611
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 1 MY-RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS------SLDENNRMPFLGIDFKN 53
M R + +LL GC + + +P + + + D G
Sbjct: 1 MRLRTTIATGVAFALLTGCAAMPEDRDRLPDTTEIQRDKQDSWAEDRPPVSRVSGRSGIE 60
Query: 54 SDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGR 102
+ +L RD L +A +GD++ + A+ +++GR
Sbjct: 61 IGRQYPAPALLRDQEVDLDLPPQA-TMGDLVAILNAEGVPAMIRDESGR 108
>gi|308051331|ref|YP_003914897.1| nitrate reductase cytochrome C subunit (NapB) [Ferrimonas
balearica DSM 9799]
gi|307633521|gb|ADN77823.1| nitrate reductase cytochrome c-type subunit (NapB) [Ferrimonas
balearica DSM 9799]
Length = 122
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 17/56 (30%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M + + ++ L GC S+ +PQ + + + +
Sbjct: 1 MMKKTLTLMAVLVGLSGCQSNSDNGQPVPQSLRGEVPVASTAPVAAIPDYPAKGSA 56
>gi|16326485|gb|AAL17807.1|AF361470_28 putative capsular polysaccharide exporter outer membrane protein
[Rhizobium leguminosarum bv. trifolii]
Length = 379
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 52/189 (27%), Gaps = 22/189 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++L C S + N R+P + + +
Sbjct: 1 MRK--LAPIVLVAVLSACA-RPSNGPTAGGFYNATAP-QSNERIPVVRLSEAPMGPVAAT 56
Query: 61 YSLWRDSHAAL-------FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ + L F D+R GD++ V I + + T N +
Sbjct: 57 PLAYAATDPGLSLMRSSGFADTRLRR-GDVIEVTILDTGEEGLFSSTQSKTLNLGRFTVD 115
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQ 173
++ + + + + + +N V +G
Sbjct: 116 STGNVTLPFVGKQRVVDSSTEALQTRIVTGLKGS-AVNPQAVVTVVDRPSSG-------- 166
Query: 174 EVRVNDEIR 182
+ VN ++R
Sbjct: 167 -ITVNGDVR 174
>gi|329923574|ref|ZP_08279036.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5]
gi|328941217|gb|EGG37515.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5]
Length = 566
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++L +L C ++ + P+ S S + + S +
Sbjct: 4 MSKTLALLLACFLVLAACSNTTNNTPAAPEKSAESSEPADPFGRYEEPVQISISIEIDPT 63
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ L + + + L VD+ A N R L
Sbjct: 64 DNELPPGDTPL-NNQYTRQIKEALNVDVDHQFAASGQNLRQRISLAIASNDLP 115
>gi|157372336|ref|YP_001480325.1| type IV B pilus protein [Serratia proteamaculans 568]
gi|157324100|gb|ABV43197.1| type IV B pilus protein [Serratia proteamaculans 568]
Length = 206
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 7/97 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + +L GC + +SP+ S+ N + + D
Sbjct: 1 MKKTILVSSLAALMLTGCVTQQP--LQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVR 58
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
Y D + + D A D L+ I I A
Sbjct: 59 Y----DRYLLVSTDP-AAVQRDPLSQIIDIRIPASVK 90
>gi|284039247|ref|YP_003389177.1| hypothetical protein Slin_4397 [Spirosoma linguale DSM 74]
gi|283818540|gb|ADB40378.1| hypothetical protein Slin_4397 [Spirosoma linguale DSM 74]
Length = 303
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 14/64 (21%), Gaps = 2/64 (3%)
Query: 1 MYRYSFIVLCYSSLLF--GCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M +Y L S L GC P + ++ +
Sbjct: 1 MNKYLLFTLLISVFLSSEGCRRQRMSRNTGPTPVSSAPTPADSTLAANPAPKLPADSAQV 60
Query: 59 KSYS 62
S
Sbjct: 61 TPGS 64
>gi|261410037|ref|YP_003246278.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261286500|gb|ACX68471.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 491
Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 31/136 (22%), Gaps = 5/136 (3%)
Query: 1 MYRYS---FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDEN-NRMPFLGIDFKNSDS 56
M R+ + ++L GC + + P +P GS + ++
Sbjct: 6 MKRFMSTGVAAVLSLTMLAGCGGNSGKNGASPSTTPAGSDKPGVSAEVEVYENGLPKNEE 65
Query: 57 TKKSYSLWRDSH-AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ + F + V I I A + +
Sbjct: 66 VTLKVGFFVGGYGREWFDYAVESFTAKYPNVKIDITASADMKTILSTKISAGNDNDMFDL 125
Query: 116 FSLFGQQTPQMNGNLN 131
F+
Sbjct: 126 FNTDPAGGIVGLAEAG 141
>gi|162149408|ref|YP_001603869.1| hypothetical protein GDI_3646 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544661|ref|YP_002276890.1| hypothetical protein Gdia_2531 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161787985|emb|CAP57589.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl
5]
gi|209532338|gb|ACI52275.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 66
Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 7/62 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L ++L GC S P P D ++ N +
Sbjct: 11 MRRSCLVCLVLIAVLAGCASH-------PSPPPAARGRDAFHQFDPPAPGVANRPAIGLG 63
Query: 61 YS 62
+
Sbjct: 64 GA 65
>gi|219850306|ref|YP_002464739.1| hypothetical protein Cagg_3463 [Chloroflexus aggregans DSM 9485]
gi|219544565|gb|ACL26303.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
Length = 432
Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 7/76 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSS-----ISEITGIPQMSPMGSSLDENNRM--PFLGIDFKNS 54
RY ++++ S +L C + IP ++ ++ P +
Sbjct: 1 MRYRWLIIALSLILAACSTERIVDLSPTSGAIPALAVPSPTITATPMTGLPTVTPTMVVP 60
Query: 55 DSTKKSYSLWRDSHAA 70
T + ++ + +
Sbjct: 61 SPTVPTTQVFVPNITS 76
>gi|239813973|ref|YP_002942883.1| hypothetical protein Vapar_0966 [Variovorax paradoxus S110]
gi|239800550|gb|ACS17617.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 219
Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 18/59 (30%), Gaps = 6/59 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+ + + LL C + + + P + ++ + + SL+
Sbjct: 15 VAMPFVLLLAACATQPAPPAEAEALPP------PPAVPRVMPVEAEPKAPATQPASLFT 67
>gi|262190496|ref|ZP_06048743.1| protein F-related protein [Vibrio cholerae CT 5369-93]
gi|262033626|gb|EEY52117.1| protein F-related protein [Vibrio cholerae CT 5369-93]
Length = 204
Score = 36.2 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 9/166 (5%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSS------LDENNRMPFLGIDFKNSDST 57
F VLC + LL GC S +++ + + E P + T
Sbjct: 1 MKFWVLCVTFLLTGCGSLVTDRMFNDNLLDVAPKGDFDVRYPEWGYAPQKNTSVMPNAMT 60
Query: 58 KKSYSLWRDSHAALFKDSRALNV--GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ + + D L + V GD + + + + + ++
Sbjct: 61 QPRSASYEDLRHYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVARF 120
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLL-IAAIVTA 160
+ + G+ + G + K + RA + + + V
Sbjct: 121 LATESGIDIVLEGHTDNTGSEKLNDKLAERRANAVKAALVQSRVAQ 166
>gi|269122317|ref|YP_003310494.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
gi|268616195|gb|ACZ10563.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
Length = 913
Score = 36.2 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +++ ++ C SS + P SP + +D +PF D N++ K++
Sbjct: 1 MKKKLILIIALVIVVLSCSSSGGQSNQNPSPSP-PTPIDVTRDIPFNPEDPHNNNEAKET 59
Query: 61 YS 62
S
Sbjct: 60 DS 61
>gi|57168545|ref|ZP_00367678.1| probable lipoprotein Cj0406c [Campylobacter coli RM2228]
gi|305432962|ref|ZP_07402120.1| lipoprotein [Campylobacter coli JV20]
gi|57020050|gb|EAL56727.1| probable lipoprotein Cj0406c [Campylobacter coli RM2228]
gi|304444116|gb|EFM36771.1| lipoprotein [Campylobacter coli JV20]
Length = 301
Score = 36.2 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEI--TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M +Y + L C + + +P P + E + +
Sbjct: 1 MKKYFL--FIIALFLAACSGASNNFVHVSMPNFKPQTPTKVEPIDSGVSIMLEPINIEQN 58
Query: 59 KSYSLWRDSH 68
+YS + ++
Sbjct: 59 NNYSDYFENS 68
>gi|293606422|ref|ZP_06688781.1| outer membrane multidrug efflux protein OprB [Achromobacter
piechaudii ATCC 43553]
gi|292815180|gb|EFF74302.1| outer membrane multidrug efflux protein OprB [Achromobacter
piechaudii ATCC 43553]
Length = 505
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 5/81 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNR----MPFLGIDFKNSDS 56
M + S + + L GC + ++ + + P S
Sbjct: 5 MIKQSALSAFVAVALAGCSLAPDYQRPDAPVTGVWPDQPKVQYGGYNNPTSLGTQPASAV 64
Query: 57 TKKSYSLWRD-SHAALFKDSR 76
++ D F+D R
Sbjct: 65 VPEAGIPAADLGWREFFRDPR 85
>gi|324327996|gb|ADY23256.1| hypothetical protein YBT020_20140 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 246
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 1 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 59
Query: 61 Y 61
Sbjct: 60 G 60
>gi|301055586|ref|YP_003793797.1| DHH subfamily 1 protein [Bacillus anthracis CI]
gi|300377755|gb|ADK06659.1| DHH subfamily 1 protein [Bacillus cereus biovar anthracis str.
CI]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 2 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|283770558|ref|ZP_06343450.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
gi|283460705|gb|EFC07795.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
Length = 307
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|282904067|ref|ZP_06311955.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
gi|282595685|gb|EFC00649.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
Length = 261
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|282908678|ref|ZP_06316497.1| lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282327442|gb|EFB57736.1| lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97]
Length = 103
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|282916753|ref|ZP_06324511.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
gi|282319240|gb|EFB49592.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
Length = 307
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|257433597|ref|ZP_05609955.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436438|ref|ZP_05612485.1| lipoprotein [Staphylococcus aureus subsp. aureus M876]
gi|282914275|ref|ZP_06322062.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|282924382|ref|ZP_06332056.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|293510262|ref|ZP_06668970.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
gi|293526857|ref|ZP_06671541.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|257281690|gb|EEV11827.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284720|gb|EEV14840.1| lipoprotein [Staphylococcus aureus subsp. aureus M876]
gi|282313769|gb|EFB44162.1| lipoprotein [Staphylococcus aureus subsp. aureus C101]
gi|282322343|gb|EFB52667.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
gi|290920415|gb|EFD97479.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
gi|291467206|gb|EFF09724.1| lipoprotein [Staphylococcus aureus subsp. aureus M809]
Length = 205
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|257425549|ref|ZP_05601974.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428208|ref|ZP_05604606.1| lipoprotein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430838|ref|ZP_05607220.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|293501300|ref|ZP_06667151.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
gi|257272006|gb|EEV04144.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275049|gb|EEV06536.1| lipoprotein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278966|gb|EEV09585.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|291096305|gb|EFE26566.1| lipoprotein [Staphylococcus aureus subsp. aureus 58-424]
Length = 205
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|253732129|ref|ZP_04866294.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253724136|gb|EES92865.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH959]
Length = 304
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|228922840|ref|ZP_04086138.1| hypothetical protein bthur0011_38250 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228836895|gb|EEM82238.1| hypothetical protein bthur0011_38250 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 248
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 3 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 61
Query: 61 Y 61
Sbjct: 62 G 62
>gi|228929138|ref|ZP_04092165.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228830428|gb|EEM76038.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|228935410|ref|ZP_04098228.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228824162|gb|EEM69976.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|229031732|ref|ZP_04187725.1| hypothetical protein bcere0028_37850 [Bacillus cereus AH1271]
gi|228729616|gb|EEL80603.1| hypothetical protein bcere0028_37850 [Bacillus cereus AH1271]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|229093150|ref|ZP_04224268.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42]
gi|228690124|gb|EEL43918.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|229163027|ref|ZP_04290983.1| hypothetical protein bcere0009_37960 [Bacillus cereus R309803]
gi|228620433|gb|EEK77303.1| hypothetical protein bcere0009_37960 [Bacillus cereus R309803]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|229186334|ref|ZP_04313499.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1]
gi|228597128|gb|EEK54783.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|229140824|ref|ZP_04269369.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26]
gi|229198212|ref|ZP_04324920.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293]
gi|228585231|gb|EEK43341.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293]
gi|228642614|gb|EEK98900.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|282919200|ref|ZP_06326935.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|282317010|gb|EFB47384.1| lipoprotein [Staphylococcus aureus subsp. aureus C427]
gi|312438109|gb|ADQ77180.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH60]
Length = 304
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|225866074|ref|YP_002751452.1| putative lipoprotein [Bacillus cereus 03BB102]
gi|225785944|gb|ACO26161.1| putative lipoprotein [Bacillus cereus 03BB102]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 2 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|222097539|ref|YP_002531596.1| hypothetical protein BCQ_3879 [Bacillus cereus Q1]
gi|221241597|gb|ACM14307.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 246
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 1 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 59
Query: 61 Y 61
Sbjct: 60 G 60
>gi|206976247|ref|ZP_03237155.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217961582|ref|YP_002340152.1| hypothetical protein BCAH187_A4221 [Bacillus cereus AH187]
gi|206745443|gb|EDZ56842.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217063458|gb|ACJ77708.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 2 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|196047188|ref|ZP_03114404.1| putative lipoprotein [Bacillus cereus 03BB108]
gi|196021937|gb|EDX60628.1| putative lipoprotein [Bacillus cereus 03BB108]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 2 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|165871130|ref|ZP_02215780.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167633513|ref|ZP_02391837.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|167639413|ref|ZP_02397684.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|170687225|ref|ZP_02878443.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|170705881|ref|ZP_02896344.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|177652719|ref|ZP_02935135.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190565999|ref|ZP_03018918.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|196034984|ref|ZP_03102391.1| putative lipoprotein [Bacillus cereus W]
gi|196038773|ref|ZP_03106081.1| putative lipoprotein [Bacillus cereus NVH0597-99]
gi|218905228|ref|YP_002453062.1| putative lipoprotein [Bacillus cereus AH820]
gi|227816867|ref|YP_002816876.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|229599951|ref|YP_002868389.1| putative lipoprotein [Bacillus anthracis str. A0248]
gi|164713049|gb|EDR18576.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167512472|gb|EDR87847.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|167530919|gb|EDR93606.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|170129421|gb|EDS98285.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|170668842|gb|EDT19587.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|172082054|gb|EDT67122.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190562918|gb|EDV16884.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|195992523|gb|EDX56484.1| putative lipoprotein [Bacillus cereus W]
gi|196030496|gb|EDX69095.1| putative lipoprotein [Bacillus cereus NVH0597-99]
gi|218539216|gb|ACK91614.1| putative lipoprotein [Bacillus cereus AH820]
gi|227002856|gb|ACP12599.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|229264359|gb|ACQ45996.1| putative lipoprotein [Bacillus anthracis str. A0248]
Length = 247
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 2 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 60
Query: 61 Y 61
Sbjct: 61 G 61
>gi|94497300|ref|ZP_01303871.1| putative curli production assembly/transport component csgg
precursor [Sphingomonas sp. SKA58]
gi|94423163|gb|EAT08193.1| putative curli production assembly/transport component csgg
precursor [Sphingomonas sp. SKA58]
Length = 336
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHS-SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R F+ + LL GC+S + + IP M+PM L
Sbjct: 1 MIRQIFLASGAALLLGGCNSLATTGRDDIPSMNPMAVYPRYTQAQRQLMDLPPPQRPVAI 60
Query: 60 SYSLWRDSHA 69
+ + D
Sbjct: 61 AVYNFSDQTG 70
>gi|42783203|ref|NP_980450.1| hypothetical protein BCE_4157 [Bacillus cereus ATCC 10987]
gi|42739131|gb|AAS43058.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 246
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 1 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 59
Query: 61 Y 61
Sbjct: 60 G 60
>gi|30264166|ref|NP_846543.1| hypothetical protein BA_4310 [Bacillus anthracis str. Ames]
gi|47529606|ref|YP_020955.1| hypothetical protein GBAA_4310 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186996|ref|YP_030248.1| hypothetical protein BAS3998 [Bacillus anthracis str. Sterne]
gi|49478526|ref|YP_038148.1| hypothetical protein BT9727_3829 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|254683857|ref|ZP_05147717.1| hypothetical protein BantC_08400 [Bacillus anthracis str.
CNEVA-9066]
gi|254721692|ref|ZP_05183481.1| hypothetical protein BantA1_04395 [Bacillus anthracis str. A1055]
gi|254736204|ref|ZP_05193910.1| hypothetical protein BantWNA_13676 [Bacillus anthracis str.
Western North America USA6153]
gi|254744093|ref|ZP_05201776.1| hypothetical protein BantKB_24340 [Bacillus anthracis str. Kruger
B]
gi|254754127|ref|ZP_05206162.1| hypothetical protein BantV_16730 [Bacillus anthracis str. Vollum]
gi|254758183|ref|ZP_05210210.1| hypothetical protein BantA9_07735 [Bacillus anthracis str.
Australia 94]
gi|30258811|gb|AAP28029.1| putative lipoprotein [Bacillus anthracis str. Ames]
gi|47504754|gb|AAT33430.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180923|gb|AAT56299.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330082|gb|AAT60728.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 246
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 1 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 59
Query: 61 Y 61
Sbjct: 60 G 60
>gi|49483672|ref|YP_040896.1| lipoprotein [Staphylococcus aureus subsp. aureus MRSA252]
gi|282905833|ref|ZP_06313688.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|283958249|ref|ZP_06375700.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295427993|ref|ZP_06820625.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591035|ref|ZP_06949673.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
gi|49241801|emb|CAG40492.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282331125|gb|EFB60639.1| lipoprotein [Staphylococcus aureus subsp. aureus Btn1260]
gi|283790398|gb|EFC29215.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128351|gb|EFG57985.1| lipoprotein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575921|gb|EFH94637.1| lipoprotein [Staphylococcus aureus subsp. aureus MN8]
gi|315195384|gb|EFU25771.1| putative lipoprotein [Staphylococcus aureus subsp. aureus CGS00]
Length = 302
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|21283104|ref|NP_646192.1| hypothetical protein MW1375 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486325|ref|YP_043546.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253733265|ref|ZP_04867430.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|297207855|ref|ZP_06924288.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911940|ref|ZP_07129383.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204544|dbj|BAB95240.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49244768|emb|CAG43204.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253728805|gb|EES97534.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|296887429|gb|EFH26329.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886186|gb|EFK81388.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 305
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|163941831|ref|YP_001646715.1| hypothetical protein BcerKBAB4_3919 [Bacillus weihenstephanensis
KBAB4]
gi|163864028|gb|ABY45087.1| conserved hypothetical protein [Bacillus weihenstephanensis
KBAB4]
Length = 241
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 1 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 59
Query: 61 Y 61
Sbjct: 60 G 60
>gi|65321482|ref|ZP_00394441.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
A2012]
gi|118479291|ref|YP_896442.1| hypothetical protein BALH_3706 [Bacillus thuringiensis str. Al
Hakam]
gi|228916728|ref|ZP_04080293.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228947808|ref|ZP_04110095.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123611|ref|ZP_04252806.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201]
gi|118418516|gb|ABK86935.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|228659746|gb|EEL15391.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201]
gi|228811795|gb|EEM58129.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228842915|gb|EEM87998.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 252
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|295677552|ref|YP_003606076.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. CCGE1002]
gi|295437395|gb|ADG16565.1| RND efflux system, outer membrane lipoprotein, NodT family
[Burkholderia sp. CCGE1002]
Length = 506
Score = 36.2 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++S I + + L GC + ++ + ++ P + +
Sbjct: 1 MQKHSLIAVAVALLATGCTLAPHYQRPAAPVTATFPTGGVYDQQPGAQGERSANGQAAAD 60
Query: 61 YSLWRDSHAALFKDSR 76
F D R
Sbjct: 61 I-----GWRNFFVDPR 71
>gi|229174765|ref|ZP_04302289.1| hypothetical protein bcere0006_38520 [Bacillus cereus MM3]
gi|228608755|gb|EEK66053.1| hypothetical protein bcere0006_38520 [Bacillus cereus MM3]
Length = 252
Score = 36.2 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + V L GC+++ E ++ + + N + +
Sbjct: 7 MKKLIMTVFIAMLALAGCNTNKEEPKKEQKLEAVK-VAVQTNPKEIKPGEKTEVQALVTQ 65
Query: 61 Y 61
Sbjct: 66 G 66
>gi|149909955|ref|ZP_01898604.1| hypothetical protein PE36_18284 [Moritella sp. PE36]
gi|149806969|gb|EDM66928.1| hypothetical protein PE36_18284 [Moritella sp. PE36]
Length = 228
Score = 36.2 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 2 YRYSFIVLCYSSLLFGCH-SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
+ + I + +LL GC + T P+ +P S+ D N+ P +
Sbjct: 1 MKKAVIAISLITLLTGCALKQPASSTNEPKETPPHSTWDGNSYEPKYPRSLLPNQPI 57
>gi|229019301|ref|ZP_04176127.1| hypothetical protein bcere0030_38080 [Bacillus cereus AH1273]
gi|229025547|ref|ZP_04181955.1| hypothetical protein bcere0029_38430 [Bacillus cereus AH1272]
gi|228735729|gb|EEL86316.1| hypothetical protein bcere0029_38430 [Bacillus cereus AH1272]
gi|228741986|gb|EEL92160.1| hypothetical protein bcere0030_38080 [Bacillus cereus AH1273]
Length = 288
Score = 36.2 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + L GC+++ E ++ + + N + +
Sbjct: 48 MKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAIK-VAVQTNPKEIKPGEKTEVQALVTQ 106
Query: 61 Y 61
Sbjct: 107 G 107
>gi|94314770|ref|YP_587979.1| EPS I polysaccharide export outer membrane protein [Cupriavidus
metallidurans CH34]
gi|93358622|gb|ABF12710.1| EPS I polysaccharide export outer membrane protein [Cupriavidus
metallidurans CH34]
Length = 362
Score = 36.2 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 6/177 (3%)
Query: 8 VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS 67
+ C + LL C S S +++ N I +
Sbjct: 1 MACAALLLSACAVSP---GMQFSSSAPVNAVSPNAMPDVTPITLDLVHEQQAHSKPTNAG 57
Query: 68 HAALFKDSRALN--VGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG-QQTP 124
L+ GDI++V + + VF QT SGG ++ G +P
Sbjct: 58 VEDLYGTPTPYRIGPGDIISVVVWDHPELVFPTQTYSIGAAFEIPTSSGGSNMPGYVVSP 117
Query: 125 QMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEI 181
+ Y G +GK + +++ +++ +V ++ SQ V V+ E+
Sbjct: 118 AGDIQFPYAGVMRVAGKTANEVRDEMARILSRVVRDPQMTVRVLGFRSQRVYVDGEV 174
>gi|325002175|ref|ZP_08123287.1| cobalamin/Fe3+-siderophores transport systems, component
[Pseudonocardia sp. P1]
Length = 329
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 16/59 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R VL LL C S+ + +G +P G +
Sbjct: 1 MLRKLLPVLALFGLLTACSSAPAPDSGSGAPAPASDGAFPARIEHVYGSTEIPEQPQRV 59
>gi|317126025|ref|YP_004100137.1| extracellular solute-binding protein family 1 [Intrasporangium
calvum DSM 43043]
gi|315590113|gb|ADU49410.1| extracellular solute-binding protein family 1 [Intrasporangium
calvum DSM 43043]
Length = 439
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 38/146 (26%), Gaps = 9/146 (6%)
Query: 1 MYRYSFIVLC----YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDS 56
M++ +F + + L C S P S+
Sbjct: 1 MHKRAFGAVAVTGVAALALSACGGSEPAAPSNPTPG-TSSAATTTGEPETPTGTAAPVRD 59
Query: 57 TKKSYSLWRDSHAA----LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL 112
+W D + + D A G + V I D +A F + T + +
Sbjct: 60 ANVDLVIWTDPDRSKPVQKYADEFAAENGVTVKVQISTDTRAQFKDATKVGKGPDVIVGA 119
Query: 113 SGGFSLFGQQTPQMNGNLNYDGGGAS 138
Q + NL+ D
Sbjct: 120 HDWLGELVQNSTVAPINLSADVASKF 145
>gi|157368569|ref|YP_001476558.1| type IV B pilus protein [Serratia proteamaculans 568]
gi|157320333|gb|ABV39430.1| type IV B pilus protein [Serratia proteamaculans 568]
Length = 214
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 9/98 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD-ENNRMPFLGIDFKNSDSTKK 59
M + + + +L GC + +SP+ S+ N P + +
Sbjct: 1 MKKTILVSSLAALMLTGCVTQQP--LQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVR 58
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFD 97
D + + D A D L+ I I A
Sbjct: 59 Y-----DRYLLVSTDP-AAVQRDPLSQVIDIRIPASVK 90
>gi|88855186|ref|ZP_01129851.1| hypothetical protein A20C1_04871 [marine actinobacterium PHSC20C1]
gi|88815714|gb|EAR25571.1| hypothetical protein A20C1_04871 [marine actinobacterium PHSC20C1]
Length = 161
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRD 66
+ L + +L GC +S E P +P + + + + D
Sbjct: 15 LTLATAVVLSGCVASAPE----PSATPTVEASSTPSPEATPTGPILRPGEAAAANRQFFD 70
Query: 67 SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN 106
+ D+ G + ++ + A D + +
Sbjct: 71 QLNNEYFDANGRGKGRSIVDNLVENGFAKQDMEVTPDNTS 110
>gi|149911216|ref|ZP_01899840.1| surface protein Lk90-like protein [Moritella sp. PE36]
gi|149805743|gb|EDM65741.1| surface protein Lk90-like protein [Moritella sp. PE36]
Length = 1193
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 44/166 (26%), Gaps = 11/166 (6%)
Query: 4 YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSL 63
+ LL C +N L I + +T +
Sbjct: 8 KRLFSFAFILLLAACD------GSNSGFPAPECGGPDNPCKELLTIVTTPNVATVLTGMQ 61
Query: 64 WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGF-----SL 118
+ A+F D ++ D++ + A + Q + +S ++ F +
Sbjct: 62 QQFKTTAVFSDGSLQDLSDLVIWSVSDTAIATINQQGWVTTKSSGEVMINATFEGHQSNA 121
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
+ L +G+ + L+ V + N
Sbjct: 122 KLTVIDGVAEQLTIFPASKVLPEGTSQQYSSFVTLMDGQVIDVTNN 167
>gi|237737898|ref|ZP_04568379.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229419778|gb|EEO34825.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 200
Score = 36.2 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 4/132 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ F++ ++ L GC S + I + P ++ + +
Sbjct: 1 MKKFIFLICIFTLFLSGCSSISTFID---ENLPKKNTTIPVALQEQIATKINPENELFAV 57
Query: 61 YSLWRDSHAALFKDSRA-LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ D A+ ++A + D+L I+ + + F+ + N S L
Sbjct: 58 GNSNIDKSGAIIAQAKANKHAKDLLKEQIKKEIKINFNTFMLNTDNYSKGIISPVLSDLT 117
Query: 120 GQQTPQMNGNLN 131
N +
Sbjct: 118 DYAVDVALKNAS 129
>gi|319650498|ref|ZP_08004638.1| hypothetical protein HMPREF1013_01243 [Bacillus sp. 2_A_57_CT2]
gi|317397679|gb|EFV78377.1| hypothetical protein HMPREF1013_01243 [Bacillus sp. 2_A_57_CT2]
Length = 211
Score = 36.2 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 25/60 (41%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + ++ S +LFGC ++ + + + +P S +N D + + ++
Sbjct: 1 MKKLITMIALLSFVLFGCSNAPEQPSDVSAEAPKKSEAVKNYAPNPQVPDDRQLEKAGQT 60
>gi|223983671|ref|ZP_03633847.1| hypothetical protein HOLDEFILI_01128 [Holdemania filiformis DSM
12042]
gi|223964368|gb|EEF68704.1| hypothetical protein HOLDEFILI_01128 [Holdemania filiformis DSM
12042]
Length = 521
Score = 36.2 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDE 40
M + + L LL GC S+ +P ++ +
Sbjct: 1 MKKLVALTLASLMLLAGCSSTPKNDGNEATPTPEAAATEA 40
>gi|117619107|ref|YP_854978.1| hypothetical protein AHA_0447 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560514|gb|ABK37462.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 193
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 16/60 (26%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ +++ + LL GC + T P P + + +
Sbjct: 1 MKLRSLLMVGALLLGGCAVNPYGGTQAPVSEPDQPVSQPDKPVTKPDAGAPLPKPVAPTG 60
>gi|91792546|ref|YP_562197.1| hypothetical protein Sden_1188 [Shewanella denitrificans OS217]
gi|91714548|gb|ABE54474.1| conserved hypothetical protein [Shewanella denitrificans OS217]
Length = 645
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
++ LL C + P +P+ + P + + S + + +
Sbjct: 10 LLFSAMLLLSACGGGSDDSASEPNSAPITP--QPTAQAPVVNVIPLASPARQGTA 62
>gi|21228446|ref|NP_634368.1| copper-binding protein [Methanosarcina mazei Go1]
gi|20906925|gb|AAM32040.1| Copper-binding protein [Methanosarcina mazei Go1]
Length = 185
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 1 MYR--YSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLD---ENNRMPFLGIDFKNSD 55
M + FI+L + L GC + S + P +SP+ + ++ + PF
Sbjct: 1 MRKEYVIFIILLGALLPSGCAENGS-VEPEPSVSPVETPVEIPATPSETPFETPVLPAEV 59
Query: 56 STKKSY 61
+
Sbjct: 60 PQGPAG 65
>gi|119385307|ref|YP_916363.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans
PD1222]
gi|119375074|gb|ABL70667.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans
PD1222]
Length = 199
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 18/60 (30%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S + L L C ++ Q P+ + G ++ + +
Sbjct: 13 MLRLSTLALVSVLALAACQQPQPQLGPDGQPLPVAYKITPREEAEIPGRVLGQINALRAN 72
>gi|296102949|ref|YP_003613095.1| curli production assembly/transport component CsgG [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057408|gb|ADF62146.1| curli production assembly/transport component CsgG [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 277
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 75/239 (31%), Gaps = 38/239 (15%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLG------------ 48
M R F++L LL GC ++ + P + P S + +P
Sbjct: 1 MQR--FLILVAVCLLSGCLTAPPKEAAKPTLMPRAQSYRDLTHLPAPTGKIFVSVYNIQD 58
Query: 49 ------IDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDI--LTVDIRID--DQAVFDN 98
++ ST S AL KDSR + L + +A +N
Sbjct: 59 ETGQFKPYPASNFSTAVPQSATAMLVTAL-KDSRWFIPLERQGLQNLLNERKIIRAAQEN 117
Query: 99 QTGRSRN-NSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157
T N L + + G + + G G G+ ++ + + +
Sbjct: 118 GTVADNNRMPLQSLAAANVMIEGSIIGYESNVKSGGAGARYFGIGADTQYQLDQIAVNLR 177
Query: 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGK 216
V + L + + ++ E++ G+ R + Y ++ E I Y
Sbjct: 178 VVNVSTGEVLSSVTTSKTILSYEVQ----AGVFR--------FIDYQRLLEGEIGYTSN 224
>gi|239996781|ref|ZP_04717305.1| Dipeptidyl peptidase IV [Alteromonas macleodii ATCC 27126]
Length = 831
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 1 MYRYSFIVLCYSS--LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M +YS +++ S L GC S+ +E + + + ++ + P + +
Sbjct: 1 MKKYSSLLIAASVTFALGGCASTTNEPSSQAASTSLPAATVQQTVTPDVAPQNSAKNGEI 60
Query: 59 KSYSLWRD 66
+ D
Sbjct: 61 TLKQIMSD 68
>gi|118462442|ref|YP_882784.1| hypothetical protein MAV_3607 [Mycobacterium avium 104]
gi|118163729|gb|ABK64626.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 278
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 2 YRYSFIVLC----YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R ++LC ++ L CH + ++G P +P + P +
Sbjct: 5 MRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPD 64
Query: 58 KKSYSLWRDSH 68
++ +++ D
Sbjct: 65 RRIGAIFIDGG 75
>gi|317406702|gb|EFV86865.1| efflux system outer membrane component [Achromobacter
xylosoxidans C54]
Length = 495
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS---PMGSSLDENNRM-PFLGIDFKNSDS 56
M++ + + + L GC + +S P + P S
Sbjct: 5 MFKQTALSAFVAVALAGCSLAPDYKRPDAPVSGNWPDQPKVQYGAYATPMTLGTQPASAV 64
Query: 57 TKKSYSLWRD-SHAALFKDSR 76
++ + D F+D R
Sbjct: 65 APQAGTPAADLGWREFFRDPR 85
>gi|41408928|ref|NP_961764.1| hypothetical protein MAP2830c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41397287|gb|AAS05147.1| hypothetical protein MAP_2830c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 278
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 2 YRYSFIVLC----YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R ++LC ++ L CH + ++G P +P + P +
Sbjct: 5 MRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPD 64
Query: 58 KKSYSLWRDSH 68
++ +++ D
Sbjct: 65 RRIGAIFIDGG 75
>gi|241760681|ref|ZP_04758773.1| putative lipoprotein [Neisseria flavescens SK114]
gi|241318862|gb|EER55388.1| putative lipoprotein [Neisseria flavescens SK114]
Length = 209
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 26/191 (13%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENN-RMPFLGIDFKNSDSTKK 59
M + ++LC + L C + P S +++ ++P + ++
Sbjct: 9 MNK--LLILCSALALSAC------VVPHPYTSTEYQKYKQSDLKIPNQPYPIRLEGEFER 60
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
+ + ++ AL ++A + T + +D QA N NN + + G +
Sbjct: 61 NGKSFPKANPAL---TKAAQIALNGTKIVTVDPQAQ--NSLKIHANNIANIGGAVGNGIK 115
Query: 120 GQQTPQMNGNLNYDGGGAS----SGKGSISRAE-----KLNLLIAAIVTAILENGNL--- 167
T + + D GK ++R+E + + + + NL
Sbjct: 116 TGLTFGLADSTVQDYYQFYCSYSDGKKELNRSEFNHAIVTTFGLTSTPKELTPHSNLDQA 175
Query: 168 IISGSQEVRVN 178
IS ++++ VN
Sbjct: 176 FISVTKDIVVN 186
>gi|254776047|ref|ZP_05217563.1| hypothetical protein MaviaA2_15445 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 278
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 2 YRYSFIVLC----YSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
R ++LC ++ L CH + ++G P +P + P +
Sbjct: 5 MRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPD 64
Query: 58 KKSYSLWRDSH 68
++ +++ D
Sbjct: 65 RRIGAIFIDGG 75
>gi|167624527|ref|YP_001674821.1| hypothetical protein Shal_2606 [Shewanella halifaxensis HAW-EB4]
gi|167354549|gb|ABZ77162.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 374
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 39/144 (27%), Gaps = 4/144 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
RYS I + C +S + Q+SP+ D + +
Sbjct: 5 MRYSLI--AATCFAAICSTSATSAEPTTQVSPIAPKEQSLKPEQVYPPVDSKYDWLQLTS 62
Query: 62 -SLWRDSHAALFKDSRALNVGDILTVDIR-IDDQAVFDNQTGRSRNNSLHRKLSGGFSLF 119
L + L+ D ++ TV I D + + + L K
Sbjct: 63 LELLKGEIKNLYDDKLEFESDELDTVFIDWEDVKVLQSSGIVSIGFTDLSTKTGHLLVEN 122
Query: 120 GQQTPQMNGNLNYDGGGASSGKGS 143
G+ N +G S
Sbjct: 123 GKSYIDGEEFDNSQIMTIIAGDQS 146
>gi|114767453|ref|ZP_01446240.1| lipoprotein, putative [Pelagibaca bermudensis HTCC2601]
gi|114540463|gb|EAU43544.1| lipoprotein, putative [Roseovarius sp. HTCC2601]
Length = 168
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +V+ +L GC SS + + Q + ++D + +
Sbjct: 1 MKKTLSVVIVAGLVLTGCSSSWNPVNWFGQSESVPVNVDPSATGATNPLIPARRA----- 55
Query: 61 YSLWRDSHAALF 72
S++R + A L+
Sbjct: 56 -SIFRSNTAELY 66
>gi|209809406|ref|YP_002264944.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
gi|208010968|emb|CAQ81375.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
Length = 185
Score = 35.8 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 32/188 (17%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M ++ V+ SLL GC S+ + T + +P S + I + S +
Sbjct: 1 MKKHLLEVIIVGSLLSGCQSTSEDETTAIKSTPTIESFITYHHDELNAIITDDIGSVAQ- 59
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
V D + V + D + +S + +L+ +
Sbjct: 60 -------------------VNDEIIVLLNGDTSFDSGSIVIKSESKDALTQLAQLLNNKP 100
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI---AAIVTAILENG---------NLI 168
+ + G+ + G + S RA + L+ I G N+
Sbjct: 101 RSEVFIAGHTDSSGSKQFNTSLSNKRANSVLALLEQKGVDANRINTYGFGEAEPIASNMN 160
Query: 169 ISGSQEVR 176
+G ++ R
Sbjct: 161 ANGRKKNR 168
>gi|254429528|ref|ZP_05043235.1| Bacterial extracellular solute-binding protein, family 3
[Alcanivorax sp. DG881]
gi|196195697|gb|EDX90656.1| Bacterial extracellular solute-binding protein, family 3
[Alcanivorax sp. DG881]
Length = 260
Score = 35.8 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 17/180 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS--------EITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M R +I++ LL GC S+ + +P P+ + +
Sbjct: 2 MKRMGWILVLAVGLLAGCSSNGHGELEGEALRVGVMPDYPPLVFREEGKVVGLERDFAEQ 61
Query: 53 NSDSTKKSYSLWR-DSHAALFKDSRALNVGDILT-VDIRIDDQAVFDNQTGRSRNNSLHR 110
S ++ +SL + LF + + I++ + I Q F + +
Sbjct: 62 LSQDLERPFSLHEYTQLSDLFAALKNNEIDIIMSGISITPARQKAFAFSLPYTTIGQMAM 121
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS-----RAEKLNLLIAAIVTAILENG 165
+ G ++G+ + + N A L NG
Sbjct: 122 IRLDDAARLATPGALFTGQYRVGYKNGTTGEAFVKETMDAQTRGFNSNTEAT--QALVNG 179
>gi|15919983|ref|NP_361043.1| TraI protein [Plasmid pSB102]
gi|15722282|emb|CAC79174.1| TraI protein [Plasmid pSB102]
Length = 58
Score = 35.8 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 6/52 (11%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
+ + ++L ++ L GC ++ + + P +++ P
Sbjct: 1 MKRALVLLMLATALAGCATNRPSVLPQLEGKPRVP-INKQAPTPIKAATPSP 51
>gi|95929039|ref|ZP_01311784.1| PKD domain protein [Desulfuromonas acetoxidans DSM 684]
gi|95134940|gb|EAT16594.1| PKD domain protein [Desulfuromonas acetoxidans DSM 684]
Length = 449
Score = 35.8 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 1 MYRYSFIVLCYSSLL--FGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + FI++C++ L+ GC S + P+ + + N + S+ST
Sbjct: 1 MKKILFILVCFTFLILNGGCSSDNDHHASTNHV-PVADAGPDQNVTLGTVVQLDGSNSTD 59
Query: 59 KSY----------SLWRDSHAALFKD--SRALNVGDI-----LTVDIRIDDQAVFDNQTG 101
+ SL S A L D +R D+ L + + D D +T
Sbjct: 60 QDGDTLTYSWIFSSLPAGSSATLSDDTAARPTFTADVEGNYELNLIVSDDVSDSLD-ETV 118
Query: 102 RSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGK 141
++ + NL+ G + G
Sbjct: 119 LITASAANSAPVADAGTDQNVLVDDTVNLDGSGSSDTDGD 158
>gi|309796551|ref|ZP_07690958.1| uncharacterized lipoprotein [Escherichia coli MS 145-7]
gi|308119863|gb|EFO57125.1| uncharacterized lipoprotein [Escherichia coli MS 145-7]
Length = 213
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPSP 61
>gi|306815710|ref|ZP_07449859.1| hypothetical protein ECNC101_03878 [Escherichia coli NC101]
gi|305851372|gb|EFM51827.1| hypothetical protein ECNC101_03878 [Escherichia coli NC101]
Length = 200
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M L +LL GC+S P M P+ S N P +
Sbjct: 3 MQPGILFSLVTLALLAGCNSPQKLQQRAPAM-PVPSVSVSRNVQPVSQDIYAQPAPEVVR 61
Query: 61 YSLW 64
Y +
Sbjct: 62 YDRY 65
>gi|255565966|ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus communis]
gi|223536698|gb|EEF38339.1| Heterochromatin protein, putative [Ricinus communis]
Length = 462
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 9/108 (8%)
Query: 99 QTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI- 157
T + S L ++ + + + ++ + N ++ +
Sbjct: 187 NTQPKKKQSRSSAGYNVTGLDINVVDKLLPSASLNNKTSADSLTGSGHQGENNGDVSIVK 246
Query: 158 -VTAILENGNLIISGSQEVRVNDEIRSL-----NVTGIVRPQDVDAHN 199
+ ENG I+GS++ +E + GIV DV A N
Sbjct: 247 IIKKADENG--YINGSKQTLDKNEDNEYDPKLSELRGIVSTNDVSADN 292
>gi|167569831|ref|ZP_02362705.1| lipoprotein, putative [Burkholderia oklahomensis C6786]
Length = 169
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEIT 26
M + + L S++L GC SE
Sbjct: 77 MKKLILLPLVASAMLAGCAVYPSEPA 102
>gi|167562642|ref|ZP_02355558.1| lipoprotein, putative [Burkholderia oklahomensis EO147]
Length = 93
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEIT 26
M + + L S++L GC SE
Sbjct: 1 MKKLILLPLVASAMLAGCAVYPSEPA 26
>gi|320140423|gb|EFW32278.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 165
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M++ + ++L + LL GC ++ +E + P + F K+
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKD 53
>gi|57650444|ref|YP_186373.1| hypothetical protein SACOL1531 [Staphylococcus aureus subsp.
aureus COL]
gi|87162187|ref|YP_494076.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195226|ref|YP_500028.1| hypothetical protein SAOUHSC_01512 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221608|ref|YP_001332430.1| hypothetical protein NWMN_1396 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509658|ref|YP_001575317.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221142049|ref|ZP_03566542.1| lipoprotein [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451146|ref|ZP_05699181.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|282921736|ref|ZP_06329453.1| lipoprotein [Staphylococcus aureus A9765]
gi|284024486|ref|ZP_06378884.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 132]
gi|294848453|ref|ZP_06789199.1| lipoprotein [Staphylococcus aureus A9754]
gi|304380927|ref|ZP_07363586.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|57284630|gb|AAW36724.1| lipoprotein, putative [Staphylococcus aureus subsp. aureus COL]
gi|87128161|gb|ABD22675.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202784|gb|ABD30594.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374408|dbj|BAF67668.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368467|gb|ABX29438.1| lipoprotein [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861201|gb|EEV84014.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|269940980|emb|CBI49364.1| putative lipoprotein [Staphylococcus aureus subsp. aureus TW20]
gi|282593998|gb|EFB98987.1| lipoprotein [Staphylococcus aureus A9765]
gi|294824479|gb|EFG40902.1| lipoprotein [Staphylococcus aureus A9754]
gi|302751320|gb|ADL65497.1| putative lipoprotein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340513|gb|EFM06448.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197760|gb|EFU28094.1| lipoprotein [Staphylococcus aureus subsp. aureus CGS01]
gi|320142733|gb|EFW34536.1| hypothetical protein HMPREF9529_01833 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329314166|gb|AEB88579.1| Lipoprotein [Staphylococcus aureus subsp. aureus T0131]
gi|329723184|gb|EGG59715.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21189]
Length = 305
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
M++ + ++L + LL GC ++ +E + P + F K+
Sbjct: 1 MFKRTKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKD 53
>gi|30062638|ref|NP_836809.1| hypothetical protein S1189 [Shigella flexneri 2a str. 2457T]
gi|30040884|gb|AAP16615.1| hypothetical protein S1189 [Shigella flexneri 2a str. 2457T]
gi|281600521|gb|ADA73505.1| fibronectin-binding protein B [Shigella flexneri 2002017]
gi|313650439|gb|EFS14846.1| fibronectin-binding protein B [Shigella flexneri 2a str. 2457T]
gi|332759415|gb|EGJ89723.1| fibronectin-binding protein B [Shigella flexneri 2747-71]
gi|332761045|gb|EGJ91332.1| fibronectin-binding protein B [Shigella flexneri K-671]
gi|332767327|gb|EGJ97521.1| fibronectin-binding protein B [Shigella flexneri 2930-71]
gi|333019312|gb|EGK38595.1| fibronectin-binding protein B [Shigella flexneri K-304]
Length = 213
Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|118471374|ref|YP_885111.1| LpqJ protein [Mycobacterium smegmatis str. MC2 155]
gi|118172661|gb|ABK73557.1| LpqJ protein [Mycobacterium smegmatis str. MC2 155]
Length = 179
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 2 YRYSFIVLCYSS---LLFGCHSSISEITGIPQMSPMGSSLDEN-----NRMPFLGIDFKN 53
+ ++ C S LL GCHS+I ++P+ + + P +
Sbjct: 1 MKVRLLLGCLLSVGGLLVGCHSAIEGKPVTKAITPIEPNFPTPRPTRSSPAPSSTVAAPP 60
Query: 54 SDSTKKSYSLWRDSHAALFKDSR 76
S + + + +F +++
Sbjct: 61 SAKPPTGATPLQPQNGYVFIETK 83
>gi|148654608|ref|YP_001274813.1| hypothetical protein RoseRS_0432 [Roseiflexus sp. RS-1]
gi|148566718|gb|ABQ88863.1| hypothetical protein RoseRS_0432 [Roseiflexus sp. RS-1]
Length = 240
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 5/128 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEIT-GIPQMSPMGSSLDENNRMPFLGID--FKNSDST 57
M + + +L C S + + P P+ ++L R +G S +
Sbjct: 1 MQKLFMFSMVMCIVLAACSQSPGDASLPAPTFIPLDTALASPRRSGPIGAYLLIDASGAR 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVG-DILTVDIRIDDQAVFDNQTGRSRNN-SLHRKLSGG 115
+ + L D V D I +A S + G
Sbjct: 61 LVAGLSFSAGATPLPTDPPDRQVWLDPDDRLADIVRRAQPSGDAQYLAVAVSGDLEGPGA 120
Query: 116 FSLFGQQT 123
F G
Sbjct: 121 FGPEGAFG 128
>gi|145220806|ref|YP_001131484.1| extracellular solute-binding protein [Mycobacterium gilvum
PYR-GCK]
gi|145213292|gb|ABP42696.1| amino acid ABC transporter substrate-binding protein, PAAT family
[Mycobacterium gilvum PYR-GCK]
Length = 324
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
Query: 1 MYRYSF----IVLCYSSLLFGCHSSISEITGIPQMS---PMGSSLDENNRMPFLGIDFKN 53
M + + L + +L GC ++ + P ++ P + L+E +P +
Sbjct: 1 MMKRALRRVGAALAAAVMLSGCAQALP-VVPTPTVTLAPPTPAGLEELPPVPARPATPAD 59
Query: 54 SD 55
+D
Sbjct: 60 TD 61
>gi|320324371|gb|EFW80450.1| outer membrane protein [Pseudomonas syringae pv. glycinea str.
B076]
gi|320328506|gb|EFW84508.1| outer membrane protein [Pseudomonas syringae pv. glycinea str. race
4]
Length = 469
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 17/161 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + L ++LL GC + P + + +P S S
Sbjct: 1 MRLFWPSLAVTALLTGC------VNLAPDYQRPEAPVSSQ-WLPATASQPVASGSVPTDI 53
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
F D R + + + V+ R A + + ++ SL
Sbjct: 54 -----DWQNFFTDKRLIRLQTLALVNNRDLRLASLNVE-----KAQAQYRIERAASLPTI 103
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ + +GK SIS L +++ +
Sbjct: 104 DASGSGTHTRTPSSTSMTGKSSISHEYSAQLGLSSYELDVF 144
>gi|257485359|ref|ZP_05639400.1| type II and III secretion system protein:NolW-like [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 387
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMS--------PMGSSLDENNRMPFLGIDFKNS 54
R + L + L GC S + M +D + P + +
Sbjct: 14 RTPLLCLATAVALGGCASKPDTLDPDNGMLQEALQGTGSQRPPVDPRSERPPVEPPSQQP 73
Query: 55 DSTKKSYSL 63
S+ + +
Sbjct: 74 ASSPQRQII 82
>gi|239820318|ref|YP_002947503.1| hypothetical protein Vapar_5645 [Variovorax paradoxus S110]
gi|239805171|gb|ACS22237.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 252
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + + +L GC ++ + G+ + MP + ++
Sbjct: 1 MRSRLLAFVIAIVLSGCAATAPPVPPHTGKLAKGAKVGVLVYMPSPAQHLHVGTTVFNNF 60
Query: 62 SLWRDSHAALFKDSRALNV 80
S + +RA +
Sbjct: 61 S--TNYQFPWTPTARAYEI 77
>gi|206601943|gb|EDZ38425.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 356
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 9/160 (5%)
Query: 1 MYRYSFI--VLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + +L LL GC +S S G SP+ + ++ +
Sbjct: 1 MISFFRAGALLGAGILLAGCATSPSLKGGPAPSSPVKPVSNTIKTAERHMLELARQYPSP 60
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
W R L + +++++ + + N +R + L SL
Sbjct: 61 DFVKAWSCRSEH--AAIRDLLMQLSVSINVSSEFLSTRKN-LDVTRRSKTRMSLDSMESL 117
Query: 119 FGQQTPQMNG----NLNYDGGGASSGKGSISRAEKLNLLI 154
G + +N + + +R +++ L
Sbjct: 118 KGLILKKDGECTFVAINPKNARDYYDESAKNREAEVSSLF 157
>gi|70732449|ref|YP_262211.1| putative lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68346748|gb|AAY94354.1| lipoprotein, putative [Pseudomonas fluorescens Pf-5]
Length = 194
Score = 35.8 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 3 RYSF-IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R F ++ S L GC S +++ P+++ + + + +D + S +
Sbjct: 4 RLLFGLITVTSLSLVGCAHSPQQLSPEPKLTAQLAPVGHGQPVVVKVVDGRPSPTLGTRG 63
Query: 62 SLWRDSHA 69
L+ ++ A
Sbjct: 64 GLYPETSA 71
>gi|238062094|ref|ZP_04606803.1| polysaccharide deacetylase [Micromonospora sp. ATCC 39149]
gi|237883905|gb|EEP72733.1| polysaccharide deacetylase [Micromonospora sp. ATCC 39149]
Length = 272
Score = 35.8 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 7/66 (10%)
Query: 3 RYSFIV-LCYSSLLFGCHSSI----SEITGIPQMSPMGSSLDENNRMP--FLGIDFKNSD 55
R + L + L GC SE T P SP + P +
Sbjct: 15 RTVLALGLSLALFLTGCSGRQTDRWSEATASPSASPEPTPEPTVAPKPTRTTPPRLRPRP 74
Query: 56 STKKSY 61
+ +
Sbjct: 75 TALPAG 80
>gi|238028496|ref|YP_002912727.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
glumae BGR1]
gi|237877690|gb|ACR30023.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia
glumae BGR1]
Length = 505
Score = 35.8 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 11/144 (7%), Positives = 35/144 (24%), Gaps = 14/144 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +++ + + + GC + +P+ + + + ++
Sbjct: 1 MRKFALTAMAVALVATGCTLAPHYERPA---APVAGTFPSDGVYATQPGASATRSANGQA 57
Query: 61 YSLWRDSHAALFKDSRALNVGDI---------LTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
S F D R + ++ ++V +A +
Sbjct: 58 AS--DIGWRNFFTDPRLQRLIELALKNNRDLRVSVLNVEAARAQYQITRAELLPALNGTG 115
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGG 135
L + ++
Sbjct: 116 TGSIQRLPAGVSTTGAPLISRTYN 139
>gi|29374943|ref|NP_814096.1| putative lipoprotein [Enterococcus faecalis V583]
gi|29342401|gb|AAO80167.1| lipoprotein, putative [Enterococcus faecalis V583]
Length = 176
Score = 35.8 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M +++ I L +++LL C ++ + + + S+++ ++ + + K+
Sbjct: 4 MIKFAGIALIFAALLSACSNAKNNTQKKAETAAQSSTIEASDSNENEPNTENITQAVKQL 63
Query: 61 YSLWRDSHAALFKDSRALNVGD-------ILTVDI--RIDDQAVFDNQTGRSRNNSLHRK 111
+ + D + D ++TV + + + + QT N+ +
Sbjct: 64 EEKFNSDEKLVKIDVKNNVKDDTSDNPHAVITVKVINDEAKKNMEEMQTAIDSNSGTEAQ 123
Query: 112 LSGGFSLFGQ 121
+ + +
Sbjct: 124 KTAIYGIQLN 133
>gi|323976522|gb|EGB71610.1| hypothetical protein ERFG_02311 [Escherichia coli TW10509]
Length = 213
Score = 35.8 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIA-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|296118806|ref|ZP_06837382.1| lipoprotein LpqB [Corynebacterium ammoniagenes DSM 20306]
gi|295968295|gb|EFG81544.1| lipoprotein LpqB [Corynebacterium ammoniagenes DSM 20306]
Length = 563
Score = 35.8 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 46/150 (30%), Gaps = 5/150 (3%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKN-----SD 55
M + + + +L GC + S S + P G +
Sbjct: 1 MKKLIAALSVSALVLSGCSTLPSASDPQVLRSFSPQPEVDPAVGPTPGQEADLLIREFYA 60
Query: 56 STKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGG 115
+ S +R + + L ++ + + + + + +G R ++ + G
Sbjct: 61 AAAIPSSDYRAARSFLTPEAAESWNPEESRRIVDVIELTSQNTSSGDQRAFTVRGSVIGS 120
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
+ G P+ +G G+ I+
Sbjct: 121 LASGGSYVPENSGYETTIRMEQVDGEWRIT 150
>gi|119504243|ref|ZP_01626323.1| Sugar fermentation stimulation protein [marine gamma
proteobacterium HTCC2080]
gi|119459751|gb|EAW40846.1| Sugar fermentation stimulation protein [marine gamma
proteobacterium HTCC2080]
Length = 255
Score = 35.8 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 5 SFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
F VL SLL GC S+ E P P S + +P+ + +S+
Sbjct: 4 IFWVLAVVSLLGGCAYSVEEADRAP---PPISPGAVPDAIPYAEPITRAGNSSP 54
>gi|330988878|gb|EGH86981.1| outer membrane protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 469
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 19/162 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + L +S+LL GC + + + S
Sbjct: 1 MRLFWPSLAFSALLTGCVN-------------LAPDYQRPEAPVSSQWLPATAGQPVASG 47
Query: 62 SLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+ D F D R + + + V+ R A + + ++ SL
Sbjct: 48 SVPTDIDWQNFFTDKRLVRLQTLALVNNRDLRLASLNVE-----KAQAQYRIERAASLPT 102
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ + +GK SIS L +++ +
Sbjct: 103 IDASGSGTHTRTPSSTSMTGKSSISHEYSAQLGLSSYELDVF 144
>gi|108760937|ref|YP_631913.1| putative lipoprotein [Myxococcus xanthus DK 1622]
gi|108464817|gb|ABF90002.1| putative lipoprotein [Myxococcus xanthus DK 1622]
Length = 176
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 6/58 (10%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M R L + +L C ++ +P+ + + P + + +
Sbjct: 1 MMRTRLAFLAAAVMLASCTDGVAP------YAPVHAPPAQEPVAPTDVLPPREGSEAR 52
>gi|253733266|ref|ZP_04867431.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|253728806|gb|EES97535.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
Length = 304
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 21/54 (38%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIAMIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|163847134|ref|YP_001635178.1| nitrite reductase, copper-containing [Chloroflexus aurantiacus
J-10-fl]
gi|222524971|ref|YP_002569442.1| nitrite reductase, copper-containing [Chloroflexus sp. Y-400-fl]
gi|163668423|gb|ABY34789.1| nitrite reductase, copper-containing [Chloroflexus aurantiacus
J-10-fl]
gi|222448850|gb|ACM53116.1| nitrite reductase, copper-containing [Chloroflexus sp. Y-400-fl]
Length = 348
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 36/142 (25%), Gaps = 14/142 (9%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R S I+ +LL GC ++ + + P + E L + + +
Sbjct: 1 MVR-SLIIAVLVTLLAGCATAPTPTGVQMPVVPTVAPAMEVTNEVMLPANAVPAPVGSRP 59
Query: 61 YSLWR-------------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNS 107
D F G ++ V + + N +S
Sbjct: 60 AQTVTVELTTREVVGYLGDGSTYTFWTFNGTVPGPMIRVRVGDTVELSLTNAPDSQLPHS 119
Query: 108 LHRKLSGGFSLFGQQTPQMNGN 129
+ G T G
Sbjct: 120 IDLHAVTGPGGGAVATQVAPGQ 141
>gi|315498479|ref|YP_004087283.1| rnd efflux system, outer membrane lipoprotein, nodt family
[Asticcacaulis excentricus CB 48]
gi|315416491|gb|ADU13132.1| RND efflux system, outer membrane lipoprotein, NodT family
[Asticcacaulis excentricus CB 48]
Length = 451
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 29/206 (14%)
Query: 6 FIVLCYSSLLFGCHS--SISEITGIPQMSPMGSSL----------DENNRMPFLGIDFKN 53
++ + +L GC + + ++ +P SP+ + D +
Sbjct: 11 LLMGVSALVLTGCAALPNTEPVSPVPSASPVPQDMLIGRWWDGYKDAQLTDLVQTALRDS 70
Query: 54 SDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ T + L +A + D + A+ + ++ ++
Sbjct: 71 PNLTAAAGRL-----------LKARALEDTQKATLYPTATALGASLQMGGKDPAIDAVTL 119
Query: 114 GGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIIS--- 170
GG + + ++ + + +L ++V A E G++
Sbjct: 120 GGINFGWELDFWGKNRAGLKATVTAAEAARADGQQAVLVLSTSLVNAWFELGHMYKDLDV 179
Query: 171 GSQEVRVNDEIRSL---NVTGIVRPQ 193
+ + + + +SL V G +RP+
Sbjct: 180 AERNLAIRTDTQSLVAQRVEGGLRPR 205
>gi|197334896|ref|YP_002155508.1| lipoprotein [Vibrio fischeri MJ11]
gi|197316386|gb|ACH65833.1| lipoprotein [Vibrio fischeri MJ11]
Length = 269
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 4 YSFIVLCYSSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
I+L S +L GC S + T P D MP +++ + S
Sbjct: 1 MRVILLAVSLILAGCASEPPQKTTDEPNAGRYQIDNDIAPDMPISVEHIEDAHPRYEPKS 60
Query: 63 LWRDSHAALFK 73
L+ + L
Sbjct: 61 LYGNKDYTLLG 71
>gi|59711353|ref|YP_204129.1| minor lipoprotein [Vibrio fischeri ES114]
gi|59479454|gb|AAW85241.1| minor lipoprotein [Vibrio fischeri ES114]
Length = 269
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 4 YSFIVLCYSSLLFGCHSSISEI-TGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
I+L S +L GC S + T P D MP +++ + S
Sbjct: 1 MRVILLAVSLILAGCASEPPQKTTDEPNAGRYQIDNDIAPDMPISVEHIEDAHPRYEPKS 60
Query: 63 LWRDSHAALFK 73
L+ + L
Sbjct: 61 LYGNKDYTLLG 71
>gi|227358106|ref|ZP_03842447.1| lipoprotein [Proteus mirabilis ATCC 29906]
gi|227161442|gb|EEI46479.1| lipoprotein [Proteus mirabilis ATCC 29906]
Length = 192
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + +LL GC + ++++ P MS + P K+
Sbjct: 1 MIKNLLCAVFALTLLAGCATPSNKLSIEPVMS---VPPSDPTMRPITLSITSQDKRPSKN 57
>gi|254505566|ref|ZP_05117713.1| cardiolipin synthetase [Vibrio parahaemolyticus 16]
gi|219551683|gb|EED28661.1| cardiolipin synthetase [Vibrio parahaemolyticus 16]
Length = 509
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1 MYRYSFIV--LCYSSLLFGCHSSISEITGIPQMSPMGSSLD 39
M + + L SLL GC + +I P +P+ S
Sbjct: 1 MIKLRRLASQLFIVSLLAGCGTLPDDIVHTPSTTPLPSDTQ 41
>gi|297207856|ref|ZP_06924289.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887430|gb|EFH26330.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 304
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|49486324|ref|YP_043545.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|49244767|emb|CAG43203.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
Length = 304
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|21283103|ref|NP_646191.1| hypothetical protein MW1374 [Staphylococcus aureus subsp. aureus
MW2]
gi|300911941|ref|ZP_07129384.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204543|dbj|BAB95239.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|300886187|gb|EFK81389.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 304
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNKETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|325958060|ref|YP_004289526.1| hypothetical protein Metbo_0302 [Methanobacterium sp. AL-21]
gi|325329492|gb|ADZ08554.1| hypothetical protein Metbo_0302 [Methanobacterium sp. AL-21]
Length = 175
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 19/152 (12%)
Query: 1 MYRYS---FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M +Y FI+LC ++ GC + S S + N+ +
Sbjct: 1 MKKYLIILFILLCAVVMVSGCVTDNKNNNETQTYSQNNVSFNYPGGWASANPTAPNAVAA 60
Query: 58 KKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
D +++ G TV I A N + + +
Sbjct: 61 V--------------ADPKSIQSGSPSTVVIIQKPNATASNLSAAY--AANYATFFNNTG 104
Query: 118 LFGQQTPQMNGNLNYDGGGASSGKGSISRAEK 149
+ N + + R +
Sbjct: 105 YQQVSEGNITVNGTGALENVYATNSTNPREYR 136
>gi|300974476|ref|ZP_07172622.1| uncharacterized lipoprotein [Escherichia coli MS 45-1]
gi|300410566|gb|EFJ94104.1| uncharacterized lipoprotein [Escherichia coli MS 45-1]
gi|315291049|gb|EFU50412.1| uncharacterized lipoprotein [Escherichia coli MS 153-1]
Length = 213
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|26247248|ref|NP_753288.1| hypothetical protein c1378 [Escherichia coli CFT073]
gi|26107649|gb|AAN79848.1|AE016759_122 Hypothetical protein ycfM [Escherichia coli CFT073]
Length = 214
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 5 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 62
>gi|124515997|gb|EAY57506.1| protein of unknown function [Leptospirillum rubarum]
Length = 357
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 8/155 (5%)
Query: 7 IVLCYSSLLFGCHSSIS-EITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+L +L GC ++ + P P+ + D + + + + + W
Sbjct: 9 ALLAAGIILSGCAAAPPSQGGSAPSFPPVATVSDSGKKAQMHMQELSHKYPSPDFVNAWS 68
Query: 66 DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ 125
R L + +++D+ + +R + L SL G +
Sbjct: 69 CRSER--DAIRDLMMQLTVSIDVS-SESLSIRKNRDVTRQSKTRMSLDSMESLKGLILKK 125
Query: 126 MNG----NLNYDGGGASSGKGSISRAEKLNLLIAA 156
+N + + +R +++ L+ A
Sbjct: 126 DGECTFVAINPKNARDYYAESAKNREAEVSSLLHA 160
>gi|282895288|ref|ZP_06303499.1| lipoprotein [Staphylococcus aureus A8117]
gi|282762339|gb|EFC02488.1| lipoprotein [Staphylococcus aureus A8117]
Length = 121
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|269203114|ref|YP_003282383.1| hypothetical protein SAAV_1477 [Staphylococcus aureus subsp.
aureus ED98]
gi|262075404|gb|ACY11377.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED98]
gi|329727265|gb|EGG63721.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21172]
Length = 298
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|171463380|ref|YP_001797493.1| hypothetical protein Pnec_0634 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192918|gb|ACB43879.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 360
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 24/231 (10%)
Query: 2 YRYSFIVL--CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+ +F+ + L GC + + + + N + +S S
Sbjct: 4 NKKTFLAYTGLSLAFLAGCATKLPVPNAESVIVGQVPADPPKNPVINTEALKADSKSIAV 63
Query: 60 SYSLWRDSHAAL--FKDSR---ALNVGDILTVDIRI--DDQAVFDNQTGRSRNNSLHRKL 112
+ ++ L +++R A +V +T D+A TG + +++ K
Sbjct: 64 TDIYFKKDGKNLTFIEETRTATANSVSSTITPKTIEVDADKANASAITGGANSSAYPVKF 123
Query: 113 SGG--FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN------ 164
+ G T + +S + +++ K + + + L
Sbjct: 124 TDLSDPKAAGPGTGAPPAPVVDMAQSGNSASSANTQSMKKSGYQSNSEYSELRYLANPIR 183
Query: 165 GNLIISGSQEVRV-------NDEIRSLNVTGIVRPQDVDAHNSVSYDKIAE 208
G LI SG + V+ N ++ ++ +D + V Y +AE
Sbjct: 184 GLLIKSGYKVVQAKPTVAAPNQGDEFFDIVKRIKARDFSDADYVLYGVLAE 234
>gi|152987882|ref|YP_001350619.1| putative lipoprotein [Pseudomonas aeruginosa PA7]
gi|150963040|gb|ABR85065.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
Length = 195
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 1 MYRYSFIVLCYS--SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + L + +L GC S ++ P + +++ + +D + S
Sbjct: 1 MLHRLLLSLMTASALVLGGCALSPQQLDPQPVLKGPLTAVGHGQPVVVKVVDGRPGPSLG 60
Query: 59 KSYSLWRDSHA 69
L+ D+
Sbjct: 61 TRGGLYADTST 71
>gi|332089292|gb|EGI94398.1| fibronectin-binding protein B [Shigella boydii 5216-82]
Length = 213
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|194882279|ref|XP_001975240.1| GG22207 [Drosophila erecta]
gi|190658427|gb|EDV55640.1| GG22207 [Drosophila erecta]
Length = 270
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 4 YSFIVLCYSSLLFGCH----SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
F+V+ ++ L C S + P +P+ P ++ + +
Sbjct: 1 MKFLVVAFAVL--ACAYGDVSHLGYDYSPPAPAPVYQPAPAPVYQPAPAPVYQPAPAP-- 56
Query: 60 SYSLWRDSHAALFK 73
+++ + A +++
Sbjct: 57 ---VYQPAPAPVYQ 67
>gi|320184232|gb|EFW59046.1| hypothetical protein SGF_03575 [Shigella flexneri CDC 796-83]
Length = 212
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|187731341|ref|YP_001880724.1| putative lipoprotein [Shigella boydii CDC 3083-94]
gi|187428333|gb|ACD07607.1| putative lipoprotein [Shigella boydii CDC 3083-94]
gi|320175612|gb|EFW50704.1| hypothetical protein SDB_01853 [Shigella dysenteriae CDC 74-1112]
Length = 212
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|15599835|ref|NP_253329.1| hypothetical protein PA4639 [Pseudomonas aeruginosa PAO1]
gi|116052784|ref|YP_793101.1| putative lipoprotein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893736|ref|YP_002442605.1| putative lipoprotein [Pseudomonas aeruginosa LESB58]
gi|254238620|ref|ZP_04931943.1| hypothetical protein PACG_04775 [Pseudomonas aeruginosa C3719]
gi|254244469|ref|ZP_04937791.1| hypothetical protein PA2G_05327 [Pseudomonas aeruginosa 2192]
gi|296391460|ref|ZP_06880935.1| putative lipoprotein [Pseudomonas aeruginosa PAb1]
gi|313107301|ref|ZP_07793496.1| putative lipoprotein [Pseudomonas aeruginosa 39016]
gi|9950893|gb|AAG08027.1|AE004878_5 hypothetical protein PA4639 [Pseudomonas aeruginosa PAO1]
gi|115588005|gb|ABJ14020.1| putative lipoprotein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170551|gb|EAZ56062.1| hypothetical protein PACG_04775 [Pseudomonas aeruginosa C3719]
gi|126197847|gb|EAZ61910.1| hypothetical protein PA2G_05327 [Pseudomonas aeruginosa 2192]
gi|218773964|emb|CAW29779.1| putative lipoprotein [Pseudomonas aeruginosa LESB58]
gi|310879998|gb|EFQ38592.1| putative lipoprotein [Pseudomonas aeruginosa 39016]
Length = 195
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 1 MYRYSFIVLCYS--SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + L + +L GC S ++ P + +++ + +D + S
Sbjct: 1 MLHRLLLSLMTASALVLGGCALSPQQLDPQPVLKGPLTAVGHGQPVVVKVVDGRPGPSLG 60
Query: 59 KSYSLWRDSHA 69
L+ D+
Sbjct: 61 TRGGLYADTST 71
>gi|15801222|ref|NP_287239.1| hypothetical protein Z1744 [Escherichia coli O157:H7 EDL933]
gi|15830737|ref|NP_309510.1| hypothetical protein ECs1483 [Escherichia coli O157:H7 str.
Sakai]
gi|16129068|ref|NP_415623.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|74311666|ref|YP_310085.1| hypothetical protein SSON_1125 [Shigella sonnei Ss046]
gi|82777282|ref|YP_403631.1| hypothetical protein SDY_2045 [Shigella dysenteriae Sd197]
gi|89107951|ref|AP_001731.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. W3110]
gi|110641281|ref|YP_669011.1| hypothetical protein ECP_1097 [Escherichia coli 536]
gi|117623290|ref|YP_852203.1| hypothetical protein APECO1_186 [Escherichia coli APEC O1]
gi|157157010|ref|YP_001462338.1| putative lipoprotein [Escherichia coli E24377A]
gi|157160632|ref|YP_001457950.1| putative lipoprotein [Escherichia coli HS]
gi|168751346|ref|ZP_02776368.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4113]
gi|168757819|ref|ZP_02782826.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4401]
gi|168764899|ref|ZP_02789906.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4501]
gi|168771330|ref|ZP_02796337.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|168776800|ref|ZP_02801807.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4196]
gi|168783475|ref|ZP_02808482.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|168790083|ref|ZP_02815090.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|168802511|ref|ZP_02827518.1| putative lipoprotein [Escherichia coli O157:H7 str. EC508]
gi|170020500|ref|YP_001725454.1| membrane lipoprotein lipid attachment site [Escherichia coli ATCC
8739]
gi|170080756|ref|YP_001730076.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
DH10B]
gi|170682321|ref|YP_001744073.1| putative lipoprotein [Escherichia coli SMS-3-5]
gi|188492338|ref|ZP_02999608.1| putative lipoprotein [Escherichia coli 53638]
gi|191168578|ref|ZP_03030362.1| putative lipoprotein [Escherichia coli B7A]
gi|191173071|ref|ZP_03034604.1| putative lipoprotein [Escherichia coli F11]
gi|193066298|ref|ZP_03047349.1| putative lipoprotein [Escherichia coli E22]
gi|193070901|ref|ZP_03051832.1| putative lipoprotein [Escherichia coli E110019]
gi|194429807|ref|ZP_03062321.1| putative lipoprotein [Escherichia coli B171]
gi|194433697|ref|ZP_03065973.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|194439709|ref|ZP_03071778.1| putative lipoprotein [Escherichia coli 101-1]
gi|195938864|ref|ZP_03084246.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. EC4024]
gi|208807606|ref|ZP_03249943.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4206]
gi|208815577|ref|ZP_03256756.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|208822753|ref|ZP_03263072.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4042]
gi|209400489|ref|YP_002269950.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|209918361|ref|YP_002292445.1| hypothetical protein ECSE_1170 [Escherichia coli SE11]
gi|215486316|ref|YP_002328747.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6
str. E2348/69]
gi|217328474|ref|ZP_03444556.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
gi|218553682|ref|YP_002386595.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218557986|ref|YP_002390899.1| outer membrane lipoprotein [Escherichia coli S88]
gi|218689057|ref|YP_002397269.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218694638|ref|YP_002402305.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218700393|ref|YP_002408022.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|218704516|ref|YP_002412035.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|227886538|ref|ZP_04004343.1| lipoprotein [Escherichia coli 83972]
gi|237706909|ref|ZP_04537390.1| fibronectin-binding protein B [Escherichia sp. 3_2_53FAA]
gi|238900359|ref|YP_002926155.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
gi|253773872|ref|YP_003036703.1| membrane lipoprotein lipid attachment site [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161211|ref|YP_003044319.1| putative outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|254792488|ref|YP_003077325.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
str. TW14359]
gi|256018639|ref|ZP_05432504.1| predicted outer membrane lipoprotein [Shigella sp. D9]
gi|256023197|ref|ZP_05437062.1| predicted outer membrane lipoprotein [Escherichia sp. 4_1_40B]
gi|260843345|ref|YP_003221123.1| putative outer membrane lipoprotein [Escherichia coli O103:H2
str. 12009]
gi|260854588|ref|YP_003228479.1| putative outer membrane lipoprotein [Escherichia coli O26:H11
str. 11368]
gi|260867468|ref|YP_003233870.1| putative outer membrane lipoprotein [Escherichia coli O111:H-
str. 11128]
gi|261226991|ref|ZP_05941272.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7
str. FRIK2000]
gi|261256225|ref|ZP_05948758.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
str. FRIK966]
gi|291282125|ref|YP_003498943.1| hypothetical protein G2583_1365 [Escherichia coli O55:H7 str.
CB9615]
gi|293404394|ref|ZP_06648388.1| ycfM protein [Escherichia coli FVEC1412]
gi|293409471|ref|ZP_06653047.1| lipoprotein [Escherichia coli B354]
gi|293414398|ref|ZP_06657047.1| lipoprotein [Escherichia coli B185]
gi|293433394|ref|ZP_06661822.1| lipoprotein [Escherichia coli B088]
gi|297521299|ref|ZP_06939685.1| hypothetical protein EcolOP_26924 [Escherichia coli OP50]
gi|298380171|ref|ZP_06989776.1| ycfM protein [Escherichia coli FVEC1302]
gi|300816806|ref|ZP_07097026.1| uncharacterized lipoprotein [Escherichia coli MS 107-1]
gi|300821115|ref|ZP_07101264.1| uncharacterized lipoprotein [Escherichia coli MS 119-7]
gi|300896866|ref|ZP_07115358.1| uncharacterized lipoprotein [Escherichia coli MS 198-1]
gi|300902497|ref|ZP_07120478.1| uncharacterized lipoprotein [Escherichia coli MS 84-1]
gi|300918712|ref|ZP_07135290.1| uncharacterized lipoprotein [Escherichia coli MS 115-1]
gi|300922632|ref|ZP_07138730.1| uncharacterized lipoprotein [Escherichia coli MS 182-1]
gi|300928342|ref|ZP_07143876.1| uncharacterized lipoprotein [Escherichia coli MS 187-1]
gi|300938673|ref|ZP_07153400.1| uncharacterized lipoprotein [Escherichia coli MS 21-1]
gi|300982512|ref|ZP_07176162.1| uncharacterized lipoprotein [Escherichia coli MS 200-1]
gi|301023311|ref|ZP_07187106.1| uncharacterized lipoprotein [Escherichia coli MS 69-1]
gi|301029589|ref|ZP_07192666.1| uncharacterized lipoprotein [Escherichia coli MS 196-1]
gi|301051108|ref|ZP_07197941.1| uncharacterized lipoprotein [Escherichia coli MS 185-1]
gi|301305659|ref|ZP_07211748.1| uncharacterized lipoprotein [Escherichia coli MS 124-1]
gi|301328523|ref|ZP_07221587.1| uncharacterized lipoprotein [Escherichia coli MS 78-1]
gi|301644520|ref|ZP_07244514.1| uncharacterized lipoprotein [Escherichia coli MS 146-1]
gi|306814046|ref|ZP_07448219.1| hypothetical protein ECNC101_18449 [Escherichia coli NC101]
gi|307137740|ref|ZP_07497096.1| hypothetical protein EcolH7_06355 [Escherichia coli H736]
gi|307310118|ref|ZP_07589768.1| membrane lipoprotein lipid attachment site [Escherichia coli W]
gi|312968817|ref|ZP_07783024.1| fibronectin-binding protein B [Escherichia coli 2362-75]
gi|312971241|ref|ZP_07785419.1| fibronectin-binding protein B [Escherichia coli 1827-70]
gi|331641648|ref|ZP_08342783.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|331646363|ref|ZP_08347466.1| putative outer membrane lipoprotein [Escherichia coli M605]
gi|331652157|ref|ZP_08353176.1| putative outer membrane lipoprotein [Escherichia coli M718]
gi|331657168|ref|ZP_08358130.1| putative outer membrane lipoprotein [Escherichia coli TA206]
gi|331662514|ref|ZP_08363437.1| putative outer membrane lipoprotein [Escherichia coli TA143]
gi|331667505|ref|ZP_08368369.1| putative outer membrane lipoprotein [Escherichia coli TA271]
gi|331672620|ref|ZP_08373409.1| putative outer membrane lipoprotein [Escherichia coli TA280]
gi|331676896|ref|ZP_08377592.1| putative outer membrane lipoprotein [Escherichia coli H591]
gi|332279707|ref|ZP_08392120.1| fibronectin-binding protein B [Shigella sp. D9]
gi|77416636|sp|P0AB39|LPOB_ECO57 RecName: Full=Penicillin-binding protein activator LpoB;
Short=PBP activator LpoB; Flags: Precursor
gi|77416637|sp|P0AB38|LPOB_ECOLI RecName: Full=Penicillin-binding protein activator LpoB;
Short=PBP activator LpoB; AltName: Full=Lipoprotein
activator of PBP from the outer membrane B; Flags:
Precursor
gi|123617454|sp|Q3Z312|LPOB_SHISS RecName: Full=Penicillin-binding protein activator LpoB;
Short=PBP activator LpoB; Flags: Precursor
gi|12514652|gb|AAG55851.1|AE005320_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1787348|gb|AAC74189.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|13360947|dbj|BAB34906.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|73855143|gb|AAZ87850.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81241430|gb|ABB62140.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|85674837|dbj|BAA35912.2| predicted outer membrane lipoprotein [Escherichia coli str. K12
substr. W3110]
gi|110342873|gb|ABG69110.1| hypothetical protein YcfM [Escherichia coli 536]
gi|115512414|gb|ABJ00489.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157066312|gb|ABV05567.1| putative lipoprotein [Escherichia coli HS]
gi|157079040|gb|ABV18748.1| putative lipoprotein [Escherichia coli E24377A]
gi|169755428|gb|ACA78127.1| membrane lipoprotein lipid attachment site [Escherichia coli ATCC
8739]
gi|169888591|gb|ACB02298.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. DH10B]
gi|170520039|gb|ACB18217.1| putative lipoprotein [Escherichia coli SMS-3-5]
gi|187767909|gb|EDU31753.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4196]
gi|188014630|gb|EDU52752.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4113]
gi|188487537|gb|EDU62640.1| putative lipoprotein [Escherichia coli 53638]
gi|188999158|gb|EDU68144.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|189355247|gb|EDU73666.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4401]
gi|189359866|gb|EDU78285.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|189365180|gb|EDU83596.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4501]
gi|189370389|gb|EDU88805.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|189375515|gb|EDU93931.1| putative lipoprotein [Escherichia coli O157:H7 str. EC508]
gi|190901372|gb|EDV61137.1| putative lipoprotein [Escherichia coli B7A]
gi|190906616|gb|EDV66222.1| putative lipoprotein [Escherichia coli F11]
gi|192926070|gb|EDV80713.1| putative lipoprotein [Escherichia coli E22]
gi|192955755|gb|EDV86227.1| putative lipoprotein [Escherichia coli E110019]
gi|194412154|gb|EDX28462.1| putative lipoprotein [Escherichia coli B171]
gi|194418126|gb|EDX34219.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|194421328|gb|EDX37346.1| putative lipoprotein [Escherichia coli 101-1]
gi|208727407|gb|EDZ77008.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4206]
gi|208732225|gb|EDZ80913.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|208738238|gb|EDZ85921.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4042]
gi|209161889|gb|ACI39322.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|209773088|gb|ACI84856.1| hypothetical protein ECs1483 [Escherichia coli]
gi|209773090|gb|ACI84857.1| hypothetical protein ECs1483 [Escherichia coli]
gi|209773092|gb|ACI84858.1| hypothetical protein ECs1483 [Escherichia coli]
gi|209773094|gb|ACI84859.1| hypothetical protein ECs1483 [Escherichia coli]
gi|209773096|gb|ACI84860.1| hypothetical protein ECs1483 [Escherichia coli]
gi|209911620|dbj|BAG76694.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215264388|emb|CAS08745.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6
str. E2348/69]
gi|217318901|gb|EEC27327.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
gi|218351370|emb|CAU97076.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218360450|emb|CAQ98004.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218364755|emb|CAR02445.1| putative outer membrane lipoprotein [Escherichia coli S88]
gi|218370379|emb|CAR18182.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|218426621|emb|CAR07449.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218431613|emb|CAR12492.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|222032858|emb|CAP75597.1| Uncharacterized protein ycfM [Escherichia coli LF82]
gi|226898119|gb|EEH84378.1| fibronectin-binding protein B [Escherichia sp. 3_2_53FAA]
gi|227836742|gb|EEJ47208.1| lipoprotein [Escherichia coli 83972]
gi|238862711|gb|ACR64709.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
gi|242376908|emb|CAQ31626.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|253324916|gb|ACT29518.1| membrane lipoprotein lipid attachment site [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973112|gb|ACT38783.1| predicted outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|253977326|gb|ACT42996.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|254591888|gb|ACT71249.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7
str. TW14359]
gi|257753237|dbj|BAI24739.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11
str. 11368]
gi|257758492|dbj|BAI29989.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2
str. 12009]
gi|257763824|dbj|BAI35319.1| predicted outer membrane lipoprotein [Escherichia coli O111:H-
str. 11128]
gi|260449756|gb|ACX40178.1| membrane lipoprotein lipid attachment site [Escherichia coli DH1]
gi|284920930|emb|CBG33993.1| putative lipoprotein [Escherichia coli 042]
gi|290761998|gb|ADD55959.1| hypothetical protein G2583_1365 [Escherichia coli O55:H7 str.
CB9615]
gi|291324213|gb|EFE63635.1| lipoprotein [Escherichia coli B088]
gi|291428980|gb|EFF02005.1| ycfM protein [Escherichia coli FVEC1412]
gi|291434456|gb|EFF07429.1| lipoprotein [Escherichia coli B185]
gi|291469939|gb|EFF12423.1| lipoprotein [Escherichia coli B354]
gi|294491823|gb|ADE90579.1| putative lipoprotein [Escherichia coli IHE3034]
gi|298279869|gb|EFI21377.1| ycfM protein [Escherichia coli FVEC1302]
gi|299877531|gb|EFI85742.1| uncharacterized lipoprotein [Escherichia coli MS 196-1]
gi|300297234|gb|EFJ53619.1| uncharacterized lipoprotein [Escherichia coli MS 185-1]
gi|300307158|gb|EFJ61678.1| uncharacterized lipoprotein [Escherichia coli MS 200-1]
gi|300359311|gb|EFJ75181.1| uncharacterized lipoprotein [Escherichia coli MS 198-1]
gi|300397080|gb|EFJ80618.1| uncharacterized lipoprotein [Escherichia coli MS 69-1]
gi|300405433|gb|EFJ88971.1| uncharacterized lipoprotein [Escherichia coli MS 84-1]
gi|300414147|gb|EFJ97457.1| uncharacterized lipoprotein [Escherichia coli MS 115-1]
gi|300421040|gb|EFK04351.1| uncharacterized lipoprotein [Escherichia coli MS 182-1]
gi|300456389|gb|EFK19882.1| uncharacterized lipoprotein [Escherichia coli MS 21-1]
gi|300463600|gb|EFK27093.1| uncharacterized lipoprotein [Escherichia coli MS 187-1]
gi|300526414|gb|EFK47483.1| uncharacterized lipoprotein [Escherichia coli MS 119-7]
gi|300530580|gb|EFK51642.1| uncharacterized lipoprotein [Escherichia coli MS 107-1]
gi|300839087|gb|EFK66847.1| uncharacterized lipoprotein [Escherichia coli MS 124-1]
gi|300845069|gb|EFK72829.1| uncharacterized lipoprotein [Escherichia coli MS 78-1]
gi|301077152|gb|EFK91958.1| uncharacterized lipoprotein [Escherichia coli MS 146-1]
gi|305852683|gb|EFM53131.1| hypothetical protein ECNC101_18449 [Escherichia coli NC101]
gi|306909836|gb|EFN40330.1| membrane lipoprotein lipid attachment site [Escherichia coli W]
gi|307553106|gb|ADN45881.1| fibronectin-binding protein B [Escherichia coli ABU 83972]
gi|307627425|gb|ADN71729.1| hypothetical protein UM146_11800 [Escherichia coli UM146]
gi|309701376|emb|CBJ00677.1| putative lipoprotein [Escherichia coli ETEC H10407]
gi|310336443|gb|EFQ01629.1| fibronectin-binding protein B [Escherichia coli 1827-70]
gi|312286219|gb|EFR14132.1| fibronectin-binding protein B [Escherichia coli 2362-75]
gi|312945667|gb|ADR26494.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
NRG 857C]
gi|315060382|gb|ADT74709.1| predicted outer membrane lipoprotein [Escherichia coli W]
gi|315135737|dbj|BAJ42896.1| fibronectin-binding protein B [Escherichia coli DH1]
gi|315253906|gb|EFU33874.1| uncharacterized lipoprotein [Escherichia coli MS 85-1]
gi|315287433|gb|EFU46844.1| uncharacterized lipoprotein [Escherichia coli MS 110-3]
gi|315296648|gb|EFU55943.1| uncharacterized lipoprotein [Escherichia coli MS 16-3]
gi|315618277|gb|EFU98867.1| fibronectin-binding protein B [Escherichia coli 3431]
gi|320179193|gb|EFW54151.1| hypothetical protein SGB_03476 [Shigella boydii ATCC 9905]
gi|320188112|gb|EFW62777.1| hypothetical protein ECoD_05245 [Escherichia coli O157:H7 str.
EC1212]
gi|320637556|gb|EFX07356.1| hypothetical protein ECO5101_10627 [Escherichia coli O157:H7 str.
G5101]
gi|320643117|gb|EFX12318.1| hypothetical protein ECO9389_04106 [Escherichia coli O157:H- str.
493-89]
gi|320648575|gb|EFX17230.1| hypothetical protein ECO2687_20221 [Escherichia coli O157:H- str.
H 2687]
gi|320653889|gb|EFX21963.1| hypothetical protein ECO7815_16558 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659369|gb|EFX26938.1| hypothetical protein ECO5905_20033 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664504|gb|EFX31655.1| hypothetical protein ECOSU61_02728 [Escherichia coli O157:H7 str.
LSU-61]
gi|323156774|gb|EFZ42909.1| fibronectin-binding protein B [Escherichia coli EPECa14]
gi|323163649|gb|EFZ49471.1| fibronectin-binding protein B [Escherichia coli E128010]
gi|323165614|gb|EFZ51401.1| fibronectin-binding protein B [Shigella sonnei 53G]
gi|323175260|gb|EFZ60873.1| fibronectin-binding protein B [Escherichia coli LT-68]
gi|323175664|gb|EFZ61258.1| fibronectin-binding protein B [Escherichia coli 1180]
gi|323190525|gb|EFZ75798.1| fibronectin-binding protein B [Escherichia coli RN587/1]
gi|323379058|gb|ADX51326.1| membrane lipoprotein lipid attachment site [Escherichia coli
KO11]
gi|323937845|gb|EGB34109.1| hypothetical protein ERCG_00930 [Escherichia coli E1520]
gi|323942574|gb|EGB38741.1| hypothetical protein ERDG_00887 [Escherichia coli E482]
gi|323947591|gb|EGB43595.1| hypothetical protein EREG_00988 [Escherichia coli H120]
gi|323953208|gb|EGB49074.1| hypothetical protein ERKG_00093 [Escherichia coli H252]
gi|323957930|gb|EGB53642.1| hypothetical protein ERLG_00834 [Escherichia coli H263]
gi|323962704|gb|EGB58282.1| hypothetical protein ERGG_00837 [Escherichia coli H489]
gi|323967046|gb|EGB62472.1| hypothetical protein ERJG_01687 [Escherichia coli M863]
gi|323973305|gb|EGB68494.1| hypothetical protein ERHG_00681 [Escherichia coli TA007]
gi|324007848|gb|EGB77067.1| uncharacterized lipoprotein [Escherichia coli MS 57-2]
gi|324013277|gb|EGB82496.1| uncharacterized lipoprotein [Escherichia coli MS 60-1]
gi|324017483|gb|EGB86702.1| uncharacterized lipoprotein [Escherichia coli MS 117-3]
gi|324117324|gb|EGC11231.1| hypothetical protein ERBG_02751 [Escherichia coli E1167]
gi|326339328|gb|EGD63142.1| hypothetical protein ECF_04747 [Escherichia coli O157:H7 str.
1125]
gi|326340409|gb|EGD64212.1| putative lipoprotein [Escherichia coli O157:H7 str. 1044]
gi|327253503|gb|EGE65141.1| fibronectin-binding protein B [Escherichia coli STEC_7v]
gi|330910921|gb|EGH39431.1| lipoprotein YcfM [Escherichia coli AA86]
gi|331038446|gb|EGI10666.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|331045115|gb|EGI17242.1| putative outer membrane lipoprotein [Escherichia coli M605]
gi|331050435|gb|EGI22493.1| putative outer membrane lipoprotein [Escherichia coli M718]
gi|331055416|gb|EGI27425.1| putative outer membrane lipoprotein [Escherichia coli TA206]
gi|331060936|gb|EGI32900.1| putative outer membrane lipoprotein [Escherichia coli TA143]
gi|331065090|gb|EGI36985.1| putative outer membrane lipoprotein [Escherichia coli TA271]
gi|331070263|gb|EGI41629.1| putative outer membrane lipoprotein [Escherichia coli TA280]
gi|331075585|gb|EGI46883.1| putative outer membrane lipoprotein [Escherichia coli H591]
gi|332102059|gb|EGJ05405.1| fibronectin-binding protein B [Shigella sp. D9]
gi|332342654|gb|AEE55988.1| fibronectin-binding protein B [Escherichia coli UMNK88]
Length = 213
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|332758268|gb|EGJ88591.1| fibronectin-binding protein B [Shigella flexneri 4343-70]
gi|333004916|gb|EGK24436.1| fibronectin-binding protein B [Shigella flexneri VA-6]
gi|333005529|gb|EGK25047.1| fibronectin-binding protein B [Shigella flexneri K-218]
gi|333008312|gb|EGK27786.1| fibronectin-binding protein B [Shigella flexneri K-272]
gi|333019800|gb|EGK39072.1| fibronectin-binding protein B [Shigella flexneri K-227]
Length = 213
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|91210260|ref|YP_540246.1| fibronectin-binding protein B [Escherichia coli UTI89]
gi|91071834|gb|ABE06715.1| fibronectin-binding protein B [Escherichia coli UTI89]
Length = 214
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 5 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 62
>gi|85705239|ref|ZP_01036338.1| hypothetical protein ROS217_17262 [Roseovarius sp. 217]
gi|85670112|gb|EAQ24974.1| hypothetical protein ROS217_17262 [Roseovarius sp. 217]
Length = 453
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 75/238 (31%), Gaps = 45/238 (18%)
Query: 6 FIVLCYSSLLFGC-------HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
++ +L GC + +S P M P + + + + S
Sbjct: 25 LLLAGACLVLAGCLRDGGSDDAEVSRAAAGPDMRPDQEARAKEAAQSEIISALQARRSVL 84
Query: 59 KSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
S + ++ D+L+ + R+ S + G ++
Sbjct: 85 VPGSSFDQVAGSVLAAYSRSAEADLLSARL-------------RAEAASKNWLPRIGPNI 131
Query: 119 FGQQTPQMNGNLNYDGGGASSGKGSISRA-EKLNLLIAAIVTAILENGN------LIISG 171
+ L + +G+ RA K ++ +AA+ A NG L ++
Sbjct: 132 SLTSLSDIVTQLIVEQVLYDNGRKKAERAFAKADVEVAAVTLAEDVNGRVFEALMLYLAA 191
Query: 172 SQEV-RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIG 228
SQ R+ E R+L +D+ + +++ KG +++ I
Sbjct: 192 SQARERLALERRTL--------EDISQFEWIMSERV---------KGGVSDMSDLNIL 232
>gi|309788177|ref|ZP_07682783.1| fibronectin-binding protein B [Shigella dysenteriae 1617]
gi|308924029|gb|EFP69530.1| fibronectin-binding protein B [Shigella dysenteriae 1617]
gi|323185772|gb|EFZ71133.1| fibronectin-binding protein B [Escherichia coli 1357]
gi|332092878|gb|EGI97946.1| fibronectin-binding protein B [Shigella dysenteriae 155-74]
Length = 210
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 1 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 58
>gi|82544427|ref|YP_408374.1| hypothetical protein SBO_1956 [Shigella boydii Sb227]
gi|81245838|gb|ABB66546.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|332094435|gb|EGI99484.1| fibronectin-binding protein B [Shigella boydii 3594-74]
Length = 212
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|71737525|ref|YP_274581.1| outer membrane protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558078|gb|AAZ37289.1| outer membrane protein [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 469
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 17/161 (10%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + L ++LL GC + P + + +P S S
Sbjct: 1 MRLFWPSLAVTALLTGC------VNLAPDYQRPEAPVSSQ-WLPATASQPVASGSVPTDI 53
Query: 62 SLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQ 121
F D R + + + V+ R A + + ++ SL
Sbjct: 54 -----DWQNFFTDKRLIRLQTLALVNNRDLRLASLNVE-----KAQAQYRIECAASLPTI 103
Query: 122 QTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ + +GK SIS L +++ +
Sbjct: 104 DASGSGTHTRTPSSTSMTGKSSISHEYSAQLGLSSYELDVF 144
>gi|156741267|ref|YP_001431396.1| hypothetical protein Rcas_1281 [Roseiflexus castenholzii DSM
13941]
gi|156232595|gb|ABU57378.1| conserved hypothetical protein [Roseiflexus castenholzii DSM
13941]
Length = 430
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 3 RYSFIVLCYSSLLFGCHSSI-SEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R ++ + L GC SI + T P+ P + + P + + +
Sbjct: 5 RRFALIGILALTLTGCSVSIGANPTATPEPRPTSTPRPTSTPRPTSTPLPTAAPTARPKP 64
Query: 62 SL 63
++
Sbjct: 65 TI 66
>gi|320201000|gb|EFW75584.1| hypothetical protein ECoL_01708 [Escherichia coli EC4100B]
Length = 213
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|281178215|dbj|BAI54545.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 214
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 5 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPTEPQQPVPTVPSVPTIPQQPGP 62
>gi|49082702|gb|AAT50751.1| PA4639 [synthetic construct]
Length = 196
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 1 MYRYSFIVLCYS--SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + L + +L GC S ++ P + +++ + +D + S
Sbjct: 1 MLHRLLLSLMTASALVLGGCALSPQQLDPQPVLKGPLTAVGHGQPVVVKVVDGRPGPSLG 60
Query: 59 KSYSLWRDSHA 69
L+ D+
Sbjct: 61 TRGGLYADTST 71
>gi|220913180|ref|YP_002488489.1| hypothetical protein Achl_2435 [Arthrobacter chlorophenolicus A6]
gi|219860058|gb|ACL40400.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
Length = 313
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 43/169 (25%), Gaps = 13/169 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + L+ G ++ + PQ +P + + ST +
Sbjct: 100 MRRLVVAAVSL-QLVSGAAANAETLAPGPQWAP-----TQEYASAMKATPESPAASTGPA 153
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
D+ + A + LT + A + + S G +
Sbjct: 154 GRAMEDATSTPATAPGAGHPEQALTPGLTPTSTAREELAHATPETAPITVDASSGAAGHS 213
Query: 121 QQTPQMNGNLNYDGGGAS-------SGKGSISRAEKLNLLIAAIVTAIL 162
Q P+ A + ++ +A + L
Sbjct: 214 QLQPRWQPRTTPLVDPAMLAPPATREEATTGGDSDHTTGTVAVLAGDTL 262
>gi|300948693|ref|ZP_07162772.1| uncharacterized lipoprotein [Escherichia coli MS 116-1]
gi|300956231|ref|ZP_07168541.1| uncharacterized lipoprotein [Escherichia coli MS 175-1]
gi|300316924|gb|EFJ66708.1| uncharacterized lipoprotein [Escherichia coli MS 175-1]
gi|300451816|gb|EFK15436.1| uncharacterized lipoprotein [Escherichia coli MS 116-1]
Length = 213
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M RY+ I + L GC + +P +
Sbjct: 4 MSRYALIT-ALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGP 61
>gi|124360329|gb|ABN08342.1| Pectinesterase; Pectinesterase inhibitor [Medicago truncatula]
Length = 324
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 15/169 (8%)
Query: 4 YSFIVLCYSSLLFG---CHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
+ LL C S+ ++ T + + S +GI +
Sbjct: 20 LITCTFILTLLLSTPALCASAPTKATSEFEFLKVAPSEFVGTVQDVVGILQEVM------ 73
Query: 61 YSLWRDSHAALFKDSR-ALNVGDILTVDIRIDD----QAVFDNQTGRSRNNSLHRKLSGG 115
S+ + F DSR + V D + + D A N++ +
Sbjct: 74 -SILSQFGGSGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQNPKGKHNSTGNVNSDVR 132
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILEN 164
L ++G + + ++ ++A ++T + N
Sbjct: 133 TWLSSALANPETCMDGFEGTSGIESQLVSTGLSQMMSMLAELLTQVDPN 181
>gi|90411794|ref|ZP_01219803.1| outer membrane efflux protein [Photobacterium profundum 3TCK]
gi|90327356|gb|EAS43720.1| outer membrane efflux protein [Photobacterium profundum 3TCK]
Length = 479
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 18/156 (11%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + +++ S L GC S I + P + +
Sbjct: 1 MNKTLSLLIGASLSLGGCASFIPDYER--------PIAPVETLWPVDESKMNITGAQVSP 52
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
YS WR + N+ ++ + + + + S F
Sbjct: 53 YSDWRQFVQS-------NNIQQVVNLALTNNRDVRIAVLNILKAEAQYGIQRSQLFPNID 105
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAA 156
N L+ + G +I R +NL I +
Sbjct: 106 LSAGASNQRLS---ENVNGGNSTIDRQYSVNLGITS 138
>gi|107099694|ref|ZP_01363612.1| hypothetical protein PaerPA_01000712 [Pseudomonas aeruginosa
PACS2]
Length = 197
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 1 MYRYSFIVLCYS--SLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M + L + +L GC S ++ P + +++ + +D + S
Sbjct: 3 MLHRLLLSLMTASALVLGGCALSPQQLDPQPVLKGPLTAVGHGQPVVVKVVDGRPGPSLG 62
Query: 59 KSYSLWRDSHA 69
L+ D+
Sbjct: 63 TRGGLYADTST 73
>gi|329733799|gb|EGG70124.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21193]
Length = 210
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|283770559|ref|ZP_06343451.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
gi|283460706|gb|EFC07796.1| lipoprotein [Staphylococcus aureus subsp. aureus H19]
Length = 301
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|282916754|ref|ZP_06324512.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
gi|282319241|gb|EFB49593.1| lipoprotein [Staphylococcus aureus subsp. aureus D139]
Length = 179
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|258423142|ref|ZP_05686035.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257846592|gb|EEV70613.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 304
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|258420312|ref|ZP_05683258.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257843699|gb|EEV68102.1| conserved hypothetical protein [Staphylococcus aureus A9719]
Length = 139
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|257793738|ref|ZP_05642717.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257787710|gb|EEV26050.1| conserved hypothetical protein [Staphylococcus aureus A9781]
Length = 301
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|253315453|ref|ZP_04838666.1| hypothetical protein SauraC_04742 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 118
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|21283105|ref|NP_646193.1| hypothetical protein MW1376 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486326|ref|YP_043547.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253733264|ref|ZP_04867429.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|297207854|ref|ZP_06924287.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911939|ref|ZP_07129382.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204545|dbj|BAB95241.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244769|emb|CAG43205.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253728804|gb|EES97533.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH130]
gi|296887428|gb|EFH26328.1| lipoprotein [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886185|gb|EFK81387.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH70]
Length = 301
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|17988375|ref|NP_541008.1| VirB7 [Brucella melitensis bv. 1 str. 16M]
gi|23499830|ref|NP_699270.1| type IV secretion system protein VirB7 [Brucella suis 1330]
gi|62317022|ref|YP_222875.1| type IV secretion system protein VirB7 [Brucella abortus bv. 1
str. 9-941]
gi|83269016|ref|YP_418307.1| type IV secretion system protein VirB7 [Brucella melitensis
biovar Abortus 2308]
gi|161620153|ref|YP_001594039.1| TraI protein [Brucella canis ATCC 23365]
gi|163844261|ref|YP_001621916.1| hypothetical protein BSUIS_B0067 [Brucella suis ATCC 23445]
gi|189022289|ref|YP_001932030.1| type IV secretion system protein VirB7 KO [Brucella abortus S19]
gi|225628542|ref|ZP_03786576.1| VirB7 [Brucella ceti str. Cudo]
gi|225685930|ref|YP_002733902.1| TraI protein [Brucella melitensis ATCC 23457]
gi|237816584|ref|ZP_04595576.1| VirB7 [Brucella abortus str. 2308 A]
gi|254691494|ref|ZP_05154748.1| TraI protein [Brucella abortus bv. 6 str. 870]
gi|254698309|ref|ZP_05160137.1| TraI protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254699378|ref|ZP_05161206.1| TraI protein [Brucella suis bv. 5 str. 513]
gi|254702497|ref|ZP_05164325.1| TraI protein [Brucella suis bv. 3 str. 686]
gi|254706377|ref|ZP_05168205.1| TraI protein [Brucella pinnipedialis M163/99/10]
gi|254711332|ref|ZP_05173143.1| TraI protein [Brucella pinnipedialis B2/94]
gi|254711931|ref|ZP_05173742.1| TraI protein [Brucella ceti M644/93/1]
gi|254715001|ref|ZP_05176812.1| TraI protein [Brucella ceti M13/05/1]
gi|254720687|ref|ZP_05182498.1| TraI protein [Brucella sp. 83/13]
gi|254731751|ref|ZP_05190329.1| TraI protein [Brucella abortus bv. 4 str. 292]
gi|256014859|ref|YP_003104868.1| type IV secretion system protein VirB7 [Brucella microti CCM
4915]
gi|256030038|ref|ZP_05443652.1| TraI protein [Brucella pinnipedialis M292/94/1]
gi|256042987|ref|ZP_05445933.1| TraI protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256059690|ref|ZP_05449885.1| TraI protein [Brucella neotomae 5K33]
gi|256112029|ref|ZP_05452974.1| TraI protein [Brucella melitensis bv. 3 str. Ether]
gi|256158211|ref|ZP_05456120.1| TraI protein [Brucella ceti M490/95/1]
gi|256252848|ref|ZP_05458384.1| TraI protein [Brucella ceti B1/94]
gi|256256679|ref|ZP_05462215.1| TraI protein [Brucella abortus bv. 9 str. C68]
gi|256261857|ref|ZP_05464389.1| VirB7 [Brucella melitensis bv. 2 str. 63/9]
gi|260166911|ref|ZP_05753722.1| type IV secretion system protein VirB7 [Brucella sp. F5/99]
gi|260544258|ref|ZP_05820079.1| type IV secretion system protein VirB7 KO [Brucella abortus NCTC
8038]
gi|260564221|ref|ZP_05834706.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
16M]
gi|260568597|ref|ZP_05839066.1| type IV secretion system protein virB7 [Brucella suis bv. 4 str.
40]
gi|260757114|ref|ZP_05869462.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759516|ref|ZP_05871864.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762760|ref|ZP_05875092.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882923|ref|ZP_05894537.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261216704|ref|ZP_05930985.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261219935|ref|ZP_05934216.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313823|ref|ZP_05953020.1| conserved hypothetical protein [Brucella pinnipedialis
M163/99/10]
gi|261318936|ref|ZP_05958133.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319572|ref|ZP_05958769.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323661|ref|ZP_05962858.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749828|ref|ZP_05993537.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753070|ref|ZP_05996779.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261756296|ref|ZP_06000005.1| type IV secretion system protein VirB7 [Brucella sp. F5/99]
gi|265985736|ref|ZP_06098471.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265987060|ref|ZP_06099617.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265989425|ref|ZP_06101982.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993474|ref|ZP_06106031.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265996722|ref|ZP_06109279.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294853090|ref|ZP_06793762.1| type IV secretion system protein VirB7 [Brucella sp. NVSL
07-0026]
gi|297250034|ref|ZP_06933735.1| type IV secretion system protein VirB7 [Brucella abortus bv. 5
str. B3196]
gi|306839361|ref|ZP_07472177.1| VirB7 [Brucella sp. NF 2653]
gi|81832627|sp|Q7CEG2|VIRB7_BRUSU RecName: Full=Type IV secretion system putative lipoprotein
virB7; Flags: Precursor
gi|123545543|sp|Q2YJ77|VIRB7_BRUA2 RecName: Full=Type IV secretion system putative lipoprotein
virB7; Flags: Precursor
gi|148841290|sp|P0C535|VIRB7_BRUAB RecName: Full=Type IV secretion system putative lipoprotein
virB7; Flags: Precursor
gi|148841291|sp|P0C537|VIRB7_BRUME RecName: Full=Type IV secretion system putative lipoprotein
virB7; Flags: Precursor
gi|148841292|sp|P0C538|VIRB7_BRUO2 RecName: Full=Type IV secretion system putative lipoprotein
virB7; Flags: Precursor
gi|5929872|gb|AAD56617.1|AF141604_7 VirB7 [Brucella suis 1330]
gi|8163890|gb|AAF73900.1|AF226278_7 VirB7 [Brucella abortus]
gi|17984154|gb|AAL53272.1| channel protein virb7 homolog [Brucella melitensis bv. 1 str.
16M]
gi|23463399|gb|AAN33275.1| type IV secretion system protein VirB7 [Brucella suis 1330]
gi|62197215|gb|AAX75514.1| type IV secretion system protein VirB7 [Brucella abortus bv. 1
str. 9-941]
gi|82939290|emb|CAJ12228.1| type IV secretion system protein VirB7 KO: K03202 type IV
secretion system protein VirB7 [Brucella melitensis
biovar Abortus 2308]
gi|122831089|gb|ABM66831.1| VirB7 [Brucella melitensis]
gi|161336964|gb|ABX63268.1| TraI protein [Brucella canis ATCC 23365]
gi|163674984|gb|ABY39094.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020863|gb|ACD73584.1| type IV secretion system protein VirB7 KO [Brucella abortus S19]
gi|225616388|gb|EEH13436.1| VirB7 [Brucella ceti str. Cudo]
gi|225642035|gb|ACO01948.1| TraI protein [Brucella melitensis ATCC 23457]
gi|237787397|gb|EEP61613.1| VirB7 [Brucella abortus str. 2308 A]
gi|255997519|gb|ACU49206.1| type IV secretion system protein VirB7 [Brucella microti CCM
4915]
gi|260097529|gb|EEW81403.1| type IV secretion system protein VirB7 KO [Brucella abortus NCTC
8038]
gi|260151864|gb|EEW86957.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
16M]
gi|260155262|gb|EEW90343.1| type IV secretion system protein virB7 [Brucella suis bv. 4 str.
40]
gi|260669834|gb|EEX56774.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673181|gb|EEX60002.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677222|gb|EEX64043.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872451|gb|EEX79520.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260918519|gb|EEX85172.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260921793|gb|EEX88361.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292262|gb|EEX95758.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298159|gb|EEY01656.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299641|gb|EEY03138.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302849|gb|EEY06346.1| conserved hypothetical protein [Brucella pinnipedialis
M163/99/10]
gi|261736280|gb|EEY24276.1| type IV secretion system protein VirB7 [Brucella sp. F5/99]
gi|261739581|gb|EEY27507.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261742823|gb|EEY30749.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551019|gb|EEZ07180.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262764344|gb|EEZ10376.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000094|gb|EEZ12784.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091333|gb|EEZ15869.1| VirB7 [Brucella melitensis bv. 2 str. 63/9]
gi|264659257|gb|EEZ29518.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264664328|gb|EEZ34589.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294818745|gb|EFG35745.1| type IV secretion system protein VirB7 [Brucella sp. NVSL
07-0026]
gi|297173903|gb|EFH33267.1| type IV secretion system protein VirB7 [Brucella abortus bv. 5
str. B3196]
gi|306405609|gb|EFM61872.1| VirB7 [Brucella sp. NF 2653]
Length = 57
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 14/51 (27%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
+ + ++ L GC ++ + + P P L
Sbjct: 1 MKKVILAFVATAFLAGCTTTGPAVVPVLDGKPRVPVNKSVPAKPPLAQPNP 51
>gi|15924478|ref|NP_372012.1| hypothetical protein SAV1488 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927069|ref|NP_374602.1| hypothetical protein SA1319 [Staphylococcus aureus subsp. aureus
N315]
gi|148267972|ref|YP_001246915.1| hypothetical protein SaurJH9_1545 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394037|ref|YP_001316712.1| hypothetical protein SaurJH1_1576 [Staphylococcus aureus subsp.
aureus JH1]
gi|156979807|ref|YP_001442066.1| hypothetical protein SAHV_1476 [Staphylococcus aureus subsp.
aureus Mu3]
gi|255006274|ref|ZP_05144875.2| hypothetical protein SauraM_07395 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258407516|ref|ZP_05680658.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258429305|ref|ZP_05688270.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443525|ref|ZP_05691865.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445591|ref|ZP_05693773.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258448326|ref|ZP_05696450.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258455539|ref|ZP_05703496.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269203115|ref|YP_003282384.1| hypothetical protein SAAV_1478 [Staphylococcus aureus subsp.
aureus ED98]
gi|282895289|ref|ZP_06303500.1| hypothetical protein SGAG_02620 [Staphylococcus aureus A8117]
gi|282929835|ref|ZP_06336974.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295407761|ref|ZP_06817540.1| hypothetical protein SMAG_02925 [Staphylococcus aureus A8819]
gi|297244662|ref|ZP_06928545.1| hypothetical protein SLAG_00747 [Staphylococcus aureus A8796]
gi|13701287|dbj|BAB42581.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|14247259|dbj|BAB57650.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|147741041|gb|ABQ49339.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946489|gb|ABR52425.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH1]
gi|156721942|dbj|BAF78359.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257840885|gb|EEV65337.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257849698|gb|EEV73664.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851290|gb|EEV75232.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855638|gb|EEV78571.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257858410|gb|EEV81289.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257862227|gb|EEV84998.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262075405|gb|ACY11378.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282589014|gb|EFB94121.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282762340|gb|EFC02489.1| hypothetical protein SGAG_02620 [Staphylococcus aureus A8117]
gi|285817169|gb|ADC37656.1| hypothetical protein SA2981_1445 [Staphylococcus aureus 04-02981]
gi|294967372|gb|EFG43422.1| hypothetical protein SMAG_02925 [Staphylococcus aureus A8819]
gi|297178692|gb|EFH37938.1| hypothetical protein SLAG_00747 [Staphylococcus aureus A8796]
gi|315128456|gb|EFT84464.1| hypothetical protein CGSSa03_13437 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727357|gb|EGG63813.1| putative lipoprotein [Staphylococcus aureus subsp. aureus 21172]
Length = 301
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ + ++L + LL GC ++ +E + P + F K++
Sbjct: 1 MFKRTKLILIATILLSGCSTTNNESNNETKSVPEEMEASKYVGQGFQPPAEKDA 54
>gi|254362196|ref|ZP_04978311.1| possible lipoprotein [Mannheimia haemolytica PHL213]
gi|261492212|ref|ZP_05988778.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495101|ref|ZP_05991566.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093768|gb|EDN74707.1| possible lipoprotein [Mannheimia haemolytica PHL213]
gi|261309236|gb|EEY10474.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312132|gb|EEY13269.1| putative lipoprotein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 66
Score = 35.5 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 10/35 (28%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMG 35
M R + L C S P M P G
Sbjct: 1 MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAG 35
>gi|134035362|sp|Q6AFL2|Y958_LEIXX RecName: Full=Putative ankyrin-containing lipoprotein Lxx09580;
Flags: Precursor
Length = 254
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 53/182 (29%), Gaps = 35/182 (19%)
Query: 3 RYSFIVLCYSSLLFGCHSSI---------SEITGIPQMSPMGSSLDENNRMPFLGIDFKN 53
R +VL S LL GC S++ P +P+ L ++
Sbjct: 8 RLLTLVLASSVLLAGCSSAVPTTPVRSATPSAAATPTATPVVPPTVNPAATASLHAAARS 67
Query: 54 SDSTKKSYSLWR---------DSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSR 104
D+ +L L + ++ +V +A+ + +
Sbjct: 68 GDAEAVRSALAAGAAIEDRGEGGRTPLVEAAKGNHV---------EAARALIEAGADVNA 118
Query: 105 NNSLHRKL---SGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEK-----LNLLIAA 156
+ + +G + + + +G I +E + +LIAA
Sbjct: 119 KDDIQDSAYLYAGAEGYLEILRMTLTTGADVNAKNRFNGTALIPASEHAHTEVVRMLIAA 178
Query: 157 IV 158
V
Sbjct: 179 GV 180
>gi|260597408|ref|YP_003209979.1| curli production assembly/transport protein CsgG [Cronobacter
turicensis z3032]
gi|260216585|emb|CBA29843.1| Curli production assembly/transport component csgG [Cronobacter
turicensis z3032]
Length = 276
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
M R IVL + LL GC ++ + P + P G S + +P
Sbjct: 1 MQR--LIVLIATILLSGCLTAPPKEAASPTLMPRGQSYQDLIHLPEP 45
>gi|255324659|ref|ZP_05365773.1| hypothetical protein CORTU0001_0705 [Corynebacterium
tuberculostearicum SK141]
gi|255298134|gb|EET77437.1| hypothetical protein CORTU0001_0705 [Corynebacterium
tuberculostearicum SK141]
Length = 94
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 18/73 (24%), Gaps = 11/73 (15%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISE-----------ITGIPQMSPMGSSLDENNRMPFLGI 49
M R + + L GC + + P P L +
Sbjct: 1 MQRTLIFAILAAFCLAGCAQPEPDRPLPTSVGATPLADAPSWQPPPRPLAPRDLPREDKP 60
Query: 50 DFKNSDSTKKSYS 62
+ + + S S
Sbjct: 61 AAPSPPAEQPSPS 73
>gi|295407760|ref|ZP_06817539.1| predicted protein [Staphylococcus aureus A8819]
gi|294967371|gb|EFG43421.1| predicted protein [Staphylococcus aureus A8819]
Length = 147
Score = 35.5 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQDFQPPAEKDA 54
>gi|148267971|ref|YP_001246914.1| hypothetical protein SaurJH9_1544 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394036|ref|YP_001316711.1| hypothetical protein SaurJH1_1575 [Staphylococcus aureus subsp.
aureus JH1]
gi|297244661|ref|ZP_06928544.1| hypothetical protein SLAG_00746 [Staphylococcus aureus A8796]
gi|147741040|gb|ABQ49338.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946488|gb|ABR52424.1| protein of unknown function DUF1672 [Staphylococcus aureus subsp.
aureus JH1]
gi|297178691|gb|EFH37937.1| hypothetical protein SLAG_00746 [Staphylococcus aureus A8796]
Length = 298
Score = 35.5 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNS 54
M++ ++L + +L GC ++ +E + P + F K++
Sbjct: 1 MFKRIKLILIATIILSGCSTTNNESNNETKSVPEEMEASKYVGQDFQPPAEKDA 54
>gi|238919706|ref|YP_002933221.1| hypothetical protein NT01EI_1809 [Edwardsiella ictaluri 93-146]
gi|238869275|gb|ACR68986.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 198
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 46/166 (27%), Gaps = 8/166 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + + LL GC + Q +S + K
Sbjct: 2 MMKRMTGIALAALLLSGCQGLLQRGERPSQPPAPTTSAKPSVVPTPRPPVVTPVPQPPKM 61
Query: 61 YSL-WRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNN----SLHRKLSGG 115
SL W+ S A L + G+ ++ + Q + Q G + + S
Sbjct: 62 SSLDWQGSFAPLIDQLLSAQGGETGSILLVDGVQNKTNGQLGMANASEVLRSALAGNPRF 121
Query: 116 FSLFGQQTPQMNGNLNYDGGGASSGKGSI---SRAEKLNLLIAAIV 158
+ Q Q +L + + +R ++ V
Sbjct: 122 QLVSAAQLAQAKQSLGLAANDSLGSRSKAIGLARQVSAQYVLYTTV 167
>gi|254362625|ref|ZP_04978714.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
PHL213]
gi|261492868|ref|ZP_05989414.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496782|ref|ZP_05993157.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|153094239|gb|EDN75110.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
PHL213]
gi|261307621|gb|EEY08949.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311409|gb|EEY12566.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 291
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 17/46 (36%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPF 46
M + V+ + +L C S ++ P++ + + N
Sbjct: 1 MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSAYV 46
>gi|193787130|dbj|BAG52336.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 97 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 149
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 150 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKLLPAGQ----KNLPEIPLSAEVTT 205
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 206 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 236
>gi|190690075|gb|ACE86812.1| pleckstrin and Sec7 domain containing 3 protein [synthetic
construct]
gi|190691449|gb|ACE87499.1| pleckstrin and Sec7 domain containing 3 protein [synthetic
construct]
Length = 982
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 32 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 84
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 85 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKLLPAGQ----KNLPEIPLSAEVTT 140
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 141 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 171
>gi|120610478|ref|YP_970156.1| peptidase M14, carboxypeptidase A [Acidovorax citrulli AAC00-1]
gi|120588942|gb|ABM32382.1| peptidase M14, carboxypeptidase A [Acidovorax citrulli AAC00-1]
Length = 618
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 15/45 (33%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDF 51
+VL + + GC S+ +P+ S+ P
Sbjct: 26 LVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTRPETPRTVPPP 70
>gi|119584186|gb|EAW63782.1| pleckstrin and Sec7 domain containing 3, isoform CRA_d [Homo
sapiens]
Length = 1013
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 63 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 115
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 116 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKLLPAGQ----KNLPEIPLSAEVTT 171
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 172 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 202
>gi|119584185|gb|EAW63781.1| pleckstrin and Sec7 domain containing 3, isoform CRA_c [Homo
sapiens]
gi|119584187|gb|EAW63783.1| pleckstrin and Sec7 domain containing 3, isoform CRA_c [Homo
sapiens]
Length = 986
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 15 LFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
L GCHS + +T P+ S ID S + +
Sbjct: 63 LTGCHSGLDSVTEGPKDVREAPSQSHLKEQSLQPIDSLISALKATEARI-------ISGT 115
Query: 75 SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
+A V D V Q + T + +++ L G + P++ +
Sbjct: 116 LQATKVLDQDAVSSFSVQQVEKELDTASRKTQRVNKLLPAGQ----KNLPEIPLSAEVTT 171
Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENG 165
+ L A ++ I+ NG
Sbjct: 172 EESFYLSIQKDLTALLTGDTQAEISQIMNNG 202
>gi|332346163|gb|AEE59497.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 198
Score = 35.5 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M L +LL GC+S P M P+ S N P + +
Sbjct: 1 MQPGILFSLVTLALLAGCNSPQKLQQRAPAM-PVPSVSVSRNVQPVSQDIYAQAAPEVVR 59
Query: 61 YSLW 64
Y +
Sbjct: 60 YDRY 63
>gi|228909919|ref|ZP_04073740.1| hypothetical protein bthur0013_40690 [Bacillus thuringiensis IBL
200]
gi|228849754|gb|EEM94587.1| hypothetical protein bthur0013_40690 [Bacillus thuringiensis IBL
200]
Length = 248
Score = 35.5 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 11/78 (14%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSIS-----------EITGIPQMSPMGSSLDENNRMPFLGI 49
M + I+ L GC+++ + + +
Sbjct: 3 MKKLIMILFIAMLALAGCNTNKEEPKKEKKLESVNVAIQTNPKEIKPGEKTEVQALVTQG 62
Query: 50 DFKNSDSTKKSYSLWRDS 67
+ +D+ + +W+D
Sbjct: 63 KERVTDADDVKFEIWKDG 80
>gi|331017212|gb|EGH97268.1| general secretion pathway protein D [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 409
Score = 35.5 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 3/63 (4%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQM---SPMGSSLDENNRMPFLGIDFKNSDSTKK 59
R + L + L GC S + M + G+ P S +
Sbjct: 14 RTPLLCLATAVALGGCASQPDTLDPDNGMLQEALQGTGSQRPPVDPRSERPPVEPPSQQT 73
Query: 60 SYS 62
+ S
Sbjct: 74 AAS 76
>gi|91784754|ref|YP_559960.1| putative phospholipase D [Burkholderia xenovorans LB400]
gi|91688708|gb|ABE31908.1| Putative phospholipase D [Burkholderia xenovorans LB400]
Length = 558
Score = 35.5 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYS 62
R+ F++ C ++ L C + Q++ + E + + + + + +
Sbjct: 31 RHFFLLCCATAFLTACATRPPATAFERQVT-HALPVTEATPLRTALMPVEAAHPDQSGFR 89
Query: 63 LWRDSHAAL 71
L + AL
Sbjct: 90 LLPNGTDAL 98
>gi|328860041|gb|EGG09148.1| hypothetical protein MELLADRAFT_96419 [Melampsora larici-populina
98AG31]
Length = 1393
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 29 PQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDI 88
PQ +P + ++ F + S+ S A L + N+GD+L VD+
Sbjct: 1088 PQTTPPVAPTQSPSKATGPPPGFVPYRPPTSATSVQSPSAAPLSSVPSSGNLGDLLNVDV 1147
Query: 89 RIDDQAVFDN 98
+A+ N
Sbjct: 1148 N-TLKALLSN 1156
>gi|226939985|ref|YP_002795058.1| type II and III secretion system protein [Laribacter
hongkongensis HLHK9]
gi|226714911|gb|ACO74049.1| type II and III secretion system protein [Laribacter
hongkongensis HLHK9]
Length = 616
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 18/72 (25%), Gaps = 2/72 (2%)
Query: 1 MYRYSFIVL--CYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M+ + LL GC + + + S + P +
Sbjct: 1 MHHSRLLPFSPLLLVLLTGCQTPPRVMPSPQHLGQSDSPPAGSIPAPVPLPVPDQATVAA 60
Query: 59 KSYSLWRDSHAA 70
YS+ A
Sbjct: 61 PVYSIIISRSAP 72
>gi|195584162|ref|XP_002081883.1| GD25487 [Drosophila simulans]
gi|194193892|gb|EDX07468.1| GD25487 [Drosophila simulans]
Length = 280
Score = 35.1 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 4 YSFIVLCYSSLLFGCH----SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
F+V+ ++ L C S + P +P+ P ++ + +
Sbjct: 1 MKFLVVAFAVL--ACAYGDVSHLGYDYSPPAPAPVYQPAPAPVYQPAPAPVYQPAPAP-- 56
Query: 60 SYSLWRDSHAALFK 73
+++ + A +++
Sbjct: 57 ---VYQPAPAPVYQ 67
>gi|11499672|ref|NP_070914.1| hypothetical protein AF2090-N [Archaeoglobus fulgidus DSM 4304]
gi|2648440|gb|AAB89163.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 1948
Score = 35.1 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 20/204 (9%)
Query: 20 SSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALN 79
++ + + P + + + + + + S + SL +F D+
Sbjct: 1249 TATIQTSTPPPPTEIKTFYLHGDSVLNTSAESTPSQIQIVANSLHSWYQNPVFADN--FR 1306
Query: 80 VGDILTVDIRIDDQAVFDNQTGR---SRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
+ D +TV++ + ++ S + + + T
Sbjct: 1307 IYDNVTVNLWLSSSTSSTHEVRVQVLSTTGTTSYLIGANSTTLTLTTTPTLYTFKIPLTS 1366
Query: 137 ASS---GKGSISRAEKL-NLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRP 192
G + R E + + + ++ + I+ VN E V+G
Sbjct: 1367 PFEFRRGDYIVLRVENIASSDMTVSMSQTYSSN---ITLHTSTYVNVEEIQSVVSG---- 1419
Query: 193 QDVDA-HNS---VSYDKIAEARIS 212
DV N + I+EARI
Sbjct: 1420 NDVTVYANVTDPIGSYDISEARIE 1443
>gi|330950379|gb|EGH50639.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas
syringae Cit 7]
Length = 468
Score = 35.1 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 19/162 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + L ++LL GC + + + S
Sbjct: 1 MRLFWPSLAVTALLAGCVN-------------LAPDYQRPEAPVSSQWLPATAAQPAASG 47
Query: 62 SLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+ D F D+R + + ++ V+ R A + + ++ SL
Sbjct: 48 SVPTDIEWQNFFIDNRLVRLQNLALVNNRDLRLASLNVE-----KAQAQYRIERAASLPT 102
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ + +GK SIS L +++ +
Sbjct: 103 IDASGSGTHTRTPSSTSMTGKSSISHEYSAQLGLSSYELDVF 144
>gi|319791711|ref|YP_004153351.1| hypothetical protein Varpa_1022 [Variovorax paradoxus EPS]
gi|315594174|gb|ADU35240.1| hypothetical protein Varpa_1022 [Variovorax paradoxus EPS]
Length = 222
Score = 35.1 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 17/59 (28%), Gaps = 6/59 (10%)
Query: 7 IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWR 65
+ + + LL C + + P + ++ + + SL+
Sbjct: 15 LAMPFVLLLAACATQPKPPAEADALPP------PAVVPRVMPVEAEPRAPATQPASLFT 67
>gi|320162258|ref|YP_004175483.1| glycosidase [Anaerolinea thermophila UNI-1]
gi|319996112|dbj|BAJ64883.1| glycosidase [Anaerolinea thermophila UNI-1]
Length = 442
Score = 35.1 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 1 MYRYSF--IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTK 58
M+R + I + L C + + + + S
Sbjct: 5 MFRNTLFRISMVLVLFLSACSVPQTPPVPP------TETPEPSATPIPTQPPTATSVPVP 58
Query: 59 KSYSLWRDSHAALFKD 74
S + + LFK+
Sbjct: 59 SPRSFFTGEYRNLFKE 74
>gi|282601502|ref|ZP_05981894.2| periplasmic binding protein [Subdoligranulum variabile DSM 15176]
gi|282568885|gb|EFB74420.1| periplasmic binding protein [Subdoligranulum variabile DSM 15176]
Length = 327
Score = 35.1 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS 32
M F LC + LL GC +S S + P +
Sbjct: 1 MMNRIFPALCAALLLTGCGASASVQSTAPAAT 32
>gi|330897354|gb|EGH28773.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 468
Score = 35.1 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 19/162 (11%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
R + L ++LL GC + + + S
Sbjct: 1 MRLFWPSLAVTALLAGCVN-------------LAPDYQRPEAPVSSQWLPATAGQPAASG 47
Query: 62 SLWRD-SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
S+ D F D+R + + ++ V+ R A + + ++ SL
Sbjct: 48 SVPTDIEWQNFFIDNRLVRLQNLALVNNRDLRLASLNVE-----KAQAQYRIERAASLPT 102
Query: 121 QQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAIL 162
+ + +GK SIS L +++ +
Sbjct: 103 IDASGSGPHTRTPSSTSMTGKSSISHEYSAQLGLSSYELDVF 144
>gi|205696353|sp|A8AI45|CSGG_CITK8 RecName: Full=Curli production assembly/transport component CsgG;
Flags: Precursor
Length = 277
Score = 35.1 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
M R ++L LL GC ++ + P + P S + +P
Sbjct: 1 MQR--LLILVAVCLLSGCLTAPPKEAAKPTLMPRAQSYKDLTHLPMP 45
>gi|206580710|ref|YP_002239277.1| putative lipoprotein [Klebsiella pneumoniae 342]
gi|288936132|ref|YP_003440191.1| membrane lipoprotein lipid attachment site [Klebsiella variicola
At-22]
gi|290510814|ref|ZP_06550184.1| lipoprotein [Klebsiella sp. 1_1_55]
gi|206569768|gb|ACI11544.1| putative lipoprotein [Klebsiella pneumoniae 342]
gi|288890841|gb|ADC59159.1| membrane lipoprotein lipid attachment site [Klebsiella variicola
At-22]
gi|289777530|gb|EFD85528.1| lipoprotein [Klebsiella sp. 1_1_55]
Length = 215
Score = 35.1 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 32/134 (23%), Gaps = 1/134 (0%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M RY+ I + L GC + + + P + S
Sbjct: 4 MCRYALIT-ALAIFLAGCAGLREQPAPVEEAKPQPQQPAQPQPTVPTVPAVPAVPSQPGP 62
Query: 61 YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
R + + + QA N +S++ + +G +
Sbjct: 63 IEHQDQQSGQPAPRVRHYDWNGAVQPLVGQMLQASGVNAGSILLVDSVNNRTNGTLNAGE 122
Query: 121 QQTPQMNGNLNYDG 134
T N
Sbjct: 123 ATTALRNALAGNGK 136
>gi|146343889|ref|YP_001208937.1| putative polysaccharide export protein [Bradyrhizobium sp. ORS278]
gi|146196695|emb|CAL80722.1| Conserved hypothetical protein; putative polysaccharide export
protein [Bradyrhizobium sp. ORS278]
Length = 236
Score = 35.1 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 11/146 (7%)
Query: 1 MYRYSF--IVLCYSSLLFGCHSSISEITGIPQM--------SPMGSSLDENNRMPFLGID 50
M Y I + ++ LL GC ++ G PQ +P + + + +
Sbjct: 1 MRAYFVPVIAILFTVLLSGCVTTSPVAVGQPQSDLDAMAYGTPSTAPVAATGQGGAIPAL 60
Query: 51 FKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHR 110
+ + + + +A + A ++ + + + Q N + S+
Sbjct: 61 RNSFAAAPRGAAGMPVGYAPARSEQ-AYHLDAGDKLRVVVYGQEGLTNTYAIDASGSITM 119
Query: 111 KLSGGFSLFGQQTPQMNGNLNYDGGG 136
L G G+ T + +
Sbjct: 120 PLIGSVPARGRTTAGLAAEIMAKLRN 145
>gi|308185862|ref|YP_003929993.1| Curli production assembly/transport component csgG precursor
[Pantoea vagans C9-1]
gi|308056372|gb|ADO08544.1| Curli production assembly/transport component csgG precursor
[Pantoea vagans C9-1]
Length = 225
Score = 35.1 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 12/131 (9%)
Query: 2 YRYSF--IVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
+Y+F + L +SL+ GC + S PQ+ + + R P F N S
Sbjct: 3 KKYAFAALSLLTTSLISGCATESSRAIQAPQVRAASQPVYQGVRSPIAVGQFDNRSSYMN 62
Query: 60 SYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAV---FDNQTGRSRNNSLHRKLSGGF 116
++ D D IL ++ ++ N + + R
Sbjct: 63 G--IFSDGV-----DRLGNQSKTILITHLQQTNRFSVLDRSNLKELQQESDFKRSQQNIK 115
Query: 117 SLFGQQTPQMN 127
T +
Sbjct: 116 GANYIITGDIT 126
>gi|306841158|ref|ZP_07473874.1| VirB7 [Brucella sp. BO2]
gi|306845316|ref|ZP_07477891.1| VirB7 [Brucella sp. BO1]
gi|306274232|gb|EFM56044.1| VirB7 [Brucella sp. BO1]
gi|306288784|gb|EFM60102.1| VirB7 [Brucella sp. BO2]
Length = 57
Score = 35.1 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 14/51 (27%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
+ + ++ L GC ++ + + P P L
Sbjct: 1 MKKVILAFVATAFLAGCTTTGPAVVPVLDGKPRVPVNKSVPATPPLAQPNP 51
>gi|91976041|ref|YP_568700.1| RTX toxins and related Ca2+-binding proteins-like
[Rhodopseudomonas palustris BisB5]
gi|91682497|gb|ABE38799.1| RTX toxins and related Ca2+-binding proteins-like
[Rhodopseudomonas palustris BisB5]
Length = 769
Score = 35.1 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIP-----QMSPMGSSLDENNRMPFLGIDFKNSDST 57
+ ++ L + L GC + + + + P D+ P D
Sbjct: 27 KRRWVPLAFLLFLTGCAAYLKSFMPVGLEAREEGKPKPPGGDDEAAGPKPDEAIATEDDD 86
Query: 58 KKSYSL 63
+ S+
Sbjct: 87 LTTASI 92
>gi|283784834|ref|YP_003364699.1| curli production assembly/transport component [Citrobacter
rodentium ICC168]
gi|282948288|emb|CBG87868.1| curli production assembly/transport component [Citrobacter
rodentium ICC168]
Length = 277
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFL 47
M R ++L +LL GC ++ + P + P S + +P
Sbjct: 1 MQR--LLILIAVTLLSGCLTTPPKEAAKPTLMPRAQSYKDLTHLPVP 45
>gi|206562425|ref|YP_002233188.1| TonB-dependent receptor [Burkholderia cenocepacia J2315]
gi|198038465|emb|CAR54423.1| TonB-dependent receptor [Burkholderia cenocepacia J2315]
Length = 788
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M+R IV LL G S+ + +
Sbjct: 18 MFRKKLIVTALGGLLTGGAVSLPAWAEDGAATAGAPDAQPAQQASDDAAAAAPKAVRANR 77
Query: 61 YSLWRD---SHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFS 117
+ R+ + R ++ D+ + A+ +N+ + + + G S
Sbjct: 78 GAAARETNLGTVTVTARRRKESIQDVPVAVTALSGDAIRNNELRVINDVTKYVPNFTGQS 137
Query: 118 LFGQQTPQM 126
G++ P+
Sbjct: 138 TEGRERPRW 146
>gi|197284024|ref|YP_002149896.1| hypothetical protein PMI0112 [Proteus mirabilis HI4320]
gi|194681511|emb|CAR40387.1| putative lipoprotein [Proteus mirabilis HI4320]
Length = 192
Score = 35.1 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + + ++L GC + ++++ P MS + P K+
Sbjct: 1 MIKNLLCAVFALTMLAGCATPSNKLSIEPVMS---VPPSDPTMRPITLSITSQDKRPSKN 57
>gi|256828531|ref|YP_003157259.1| hypothetical protein Dbac_0720 [Desulfomicrobium baculatum DSM
4028]
gi|256577707|gb|ACU88843.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium
baculatum DSM 4028]
Length = 186
Score = 35.1 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIP 29
M R F+V L GC + + P
Sbjct: 1 MRRAFFLVFFLVLALAGCATPRIVVLSDP 29
>gi|270296362|ref|ZP_06202562.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273766|gb|EFA19628.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 596
Score = 35.1 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + FI LL GC + + + + +++ + I + ++
Sbjct: 1 MKKILFIASAILILLSGCENFLDSELLTEKTTANFPETEKDAQEMVTAIYAHLLFESPET 60
Query: 61 YSLW 64
S +
Sbjct: 61 SSQY 64
>gi|160891985|ref|ZP_02072988.1| hypothetical protein BACUNI_04444 [Bacteroides uniformis ATCC
8492]
gi|156858463|gb|EDO51894.1| hypothetical protein BACUNI_04444 [Bacteroides uniformis ATCC
8492]
Length = 596
Score = 35.1 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M + FI LL GC + + + + +++ + I + ++
Sbjct: 1 MKKILFIASAILILLSGCENFLDSELLTEKTTANFPETEKDAQEMVTAIYAHLLFESPET 60
Query: 61 YSLW 64
S +
Sbjct: 61 SSQY 64
>gi|237810849|ref|YP_002895300.1| capsular polysaccharide biosynthesis/export protein [Burkholderia
pseudomallei MSHR346]
gi|237503864|gb|ACQ96182.1| capsular polysaccharide biosynthesis/export protein [Burkholderia
pseudomallei MSHR346]
Length = 429
Score = 35.1 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 12/163 (7%)
Query: 1 MYRYSFIVLCYSSLLFGCH---------SSISEITGIPQMSPMGSSLDENNRMPFLGIDF 51
M++ + L GC S +++ P S + ++ +
Sbjct: 1 MFKPLAWASATALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQA 60
Query: 52 KNSDSTKKSYSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRK 111
+D+ K L + AA D R + D+L + + + G + S
Sbjct: 61 DEADTRAKEAGLAQSLPAA-SADYR-VGPDDVLGIVVWDHPELTRGGGNGTGADTSPLAD 118
Query: 112 LSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLI 154
+ G + ++ G S + N I
Sbjct: 119 IGTLQ-ASGGLGGVLPQQVSAFGANGQGEVDSPGQRVAANGTI 160
>gi|315498554|ref|YP_004087358.1| lytic murein transglycosylase [Asticcacaulis excentricus CB 48]
gi|315416566|gb|ADU13207.1| lytic murein transglycosylase [Asticcacaulis excentricus CB 48]
Length = 442
Score = 35.1 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 9/110 (8%)
Query: 1 MYRYSFIVLCYSSLLFGCHSS---ISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDST 57
M R VL L C ++ + I PQ + + ++ T
Sbjct: 1 MKRR---VLSLCLFLGACSTASSLPTSIENKPQPPRAETGQATDKPQTPPKTSPASAPVT 57
Query: 58 KKSYSLWRDSHAALFKDS---RALNVGDILTVDIRIDDQAVFDNQTGRSR 104
+++ WR++ A RA ++ V + Q S+
Sbjct: 58 YANFADWREAFVAKAAARGFERAFVENLLVDVQPKESVVKADTGQPEFSK 107
>gi|159899167|ref|YP_001545414.1| SMP-30/gluconolaconase/LRE domain-containing protein
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892206|gb|ABX05286.1| SMP-30/Gluconolaconase/LRE domain protein [Herpetosiphon
aurantiacus ATCC 23779]
Length = 330
Score = 35.1 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITG-IPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
M R ++L L C S+++ P + + + P L +
Sbjct: 1 MARIYLLMLIIGVSLTSCGSTVAPTATIAPSTTSVSQAEATATVAPTLEPTTAPIAAITA 60
Query: 60 S 60
Sbjct: 61 P 61
>gi|163745256|ref|ZP_02152616.1| hypothetical protein OIHEL45_06695 [Oceanibulbus indolifex
HEL-45]
gi|161382074|gb|EDQ06483.1| hypothetical protein OIHEL45_06695 [Oceanibulbus indolifex
HEL-45]
Length = 97
Score = 35.1 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 16/75 (21%), Gaps = 7/75 (9%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
+ I S L C +++ P ++ P + +
Sbjct: 1 MKLPLIAGAMSLTLGACATALPPF-------PDVTTAYVQQPTPLPEVAAMTAADNSTRG 53
Query: 62 SLWRDSHAALFKDSR 76
S R
Sbjct: 54 SAATAEEQPFAGYRR 68
>gi|148253081|ref|YP_001237666.1| putative outer membrane lipoprotein (NodT-like), RND efflux system
[Bradyrhizobium sp. BTAi1]
gi|146405254|gb|ABQ33760.1| putative outer membrane lipoprotein (NodT-like), RND efflux system
[Bradyrhizobium sp. BTAi1]
Length = 543
Score = 35.1 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 34/142 (23%), Gaps = 12/142 (8%)
Query: 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSY 61
YR F C + LL C P+ S + L + +S +
Sbjct: 21 YRSVFAASCAALLLSSCAV-------GPKFSSPPTPDVARYTPELLSSPHSSPESPGIAG 73
Query: 62 SLWRDSH---AALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
+ + + R+ + D++ + + R + + G
Sbjct: 74 QRFIEGGDIPTRWWAAFRSQPLNDLIRLAVDHSP--TLQASEAAIRVANYNALAQRGLFF 131
Query: 119 FGQQTPQMNGNLNYDGGGASSG 140
G G
Sbjct: 132 PQISGSSGPSQTLLTNAGTVFG 153
>gi|330889717|gb|EGH22378.1| general secretion pathway protein D [Pseudomonas syringae pv.
mori str. 301020]
Length = 88
Score = 35.1 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMS--------PMGSSLDENNRMPFLGIDFKNS 54
R + L + L GC S + M +D + P + +
Sbjct: 14 RTPLLCLATAVALGGCASKPDTLDPDNGMLQEALQGTGSQRPPVDPRSERPPVEPPSQQP 73
Query: 55 DSTKKSYSL 63
S+ + +
Sbjct: 74 ASSPQRQII 82
>gi|269138344|ref|YP_003295044.1| hypothetical protein ETAE_0988 [Edwardsiella tarda EIB202]
gi|267984004|gb|ACY83833.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
gi|304558376|gb|ADM41040.1| Hypothetical lipoprotein yajG precursor [Edwardsiella tarda
FL6-60]
Length = 194
Score = 35.1 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMS-PMGSSLDENNRMPFLGIDFKNSDSTK 58
M + FI L L GC S + + PQM+ P + + G D + +
Sbjct: 3 MLKKFFIPLLALIALAGCASHSTTLNINPQMALPQQDPTLQGITISINGADMRQDKALA 61
>gi|319653674|ref|ZP_08007772.1| hypothetical protein HMPREF1013_04389 [Bacillus sp. 2_A_57_CT2]
gi|317394647|gb|EFV75387.1| hypothetical protein HMPREF1013_04389 [Bacillus sp. 2_A_57_CT2]
Length = 126
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDE 40
M + F+ C LL GC +P++ + ++ E
Sbjct: 1 MRKAIFLFACVLFLLAGCSKENDAAEKVPELLEVSVNIPE 40
>gi|260595856|ref|YP_003208427.1| hypothetical protein CTU_00640 [Cronobacter turicensis z3032]
gi|260215033|emb|CBA26719.1| unknown protein [Cronobacter turicensis z3032]
Length = 164
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 18/49 (36%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGI 49
M + L + + GC + +T ++ + + + +R +
Sbjct: 1 MNMRIVLALLFVLGVAGCKTPPPAVTDDTIVTSVVNGVTLTHRHAVIPP 49
>gi|308270699|emb|CBX27309.1| Outer membrane protein oprM [uncultured Desulfobacterium sp.]
Length = 508
Score = 34.7 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCH---SSISEITGIPQMSPMGSSLDENNRMPFLGIDFK 52
M + ++L + GC + +P P G + P +
Sbjct: 41 MKKQIILILGVLLFMGGCSMNPKYTKPLAPVPAEWPKGEAYKLTQAAPETPTAPE 95
>gi|289625539|ref|ZP_06458493.1| general secretion pathway protein D [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|330866897|gb|EGH01606.1| general secretion pathway protein D [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 775
Score = 34.7 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 3 RYSFIVLCYSSLLFGCHSSISEITGIPQMS--------PMGSSLDENNRMPFLGIDFKNS 54
R + L + L GC S + M +D + P + +
Sbjct: 14 RTPLLCLATAVALGGCASKPDTLDPDNGMLQEALQGTGSQRPPVDPRSERPPVEPPSQQP 73
Query: 55 DSTKKSYSL 63
S+ + +
Sbjct: 74 ASSPQRQII 82
>gi|186475825|ref|YP_001857295.1| polysaccharide export protein [Burkholderia phymatum STM815]
gi|184192284|gb|ACC70249.1| polysaccharide export protein [Burkholderia phymatum STM815]
Length = 393
Score = 34.7 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 32/126 (25%), Gaps = 7/126 (5%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGS--SLDENNRMPFLGIDFKNSDSTK 58
+ R+ I L ++ L C ++ ++ + + +
Sbjct: 2 LKRHITISLALTTFLSACATAPGNYLDTSRLKEDQQNKPAETYPVTLIDASVIQKQQAQT 61
Query: 59 KSYSLWRDSHAA-LFKDSRAL----NVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS 113
+ F D DIL + + + N + S + + L
Sbjct: 62 ADAIAHQVLPPPGPFADPTQYVYRIAPQDILGITVWDHPELTTPNGSTLSSGGNTTQTLG 121
Query: 114 GGFSLF 119
G
Sbjct: 122 GALQQP 127
>gi|108757326|ref|YP_633315.1| hypothetical protein MXAN_5162 [Myxococcus xanthus DK 1622]
gi|108461206|gb|ABF86391.1| hypothetical protein MXAN_5162 [Myxococcus xanthus DK 1622]
Length = 283
Score = 34.7 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 17/62 (27%)
Query: 1 MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
M R + + LC ++ L C S + + + + +
Sbjct: 38 MNRTALLSLCVAASLVACTERTSSPAAGVDSGIAAAPVAPATPGKGQTPSPAPNTEPQGA 97
Query: 61 YS 62
S
Sbjct: 98 GS 99
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.306 0.130 0.369
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,735,797,306
Number of Sequences: 14124377
Number of extensions: 81340869
Number of successful extensions: 407275
Number of sequences better than 10.0: 3648
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 1390
Number of HSP's that attempted gapping in prelim test: 387785
Number of HSP's gapped (non-prelim): 14914
length of query: 238
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 103
effective length of database: 2,936,002,735
effective search space: 302408281705
effective search space used: 302408281705
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 79 (35.1 bits)