HHsearch alignment for GI: 254780375 and conserved domain: COG3334
>COG3334 Uncharacterized conserved protein [Function unknown].
Probab=99.96 E-value=8.3e-27 Score=188.66 Aligned_cols=165 Identities=27% Similarity=0.449 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Q ss_conf 3788999998999999999999841302210146----6778576899999997667999999999999999999--999
Q gi|254780375|r 2 ILLPIIYYYKKRDMLSQLLFLLFFFLQGFANQSY----GDPTLVDREIQQYCTNVIDSVRERDYLSQKKVLEDLQ--KDI 75 (175)
Q Consensus 2 i~ip~if~~~~~~~l~~~~~~l~~~~~~~a~~~~----~~~~~~~~ei~~~~~~~~~~~re~~l~~~e~eL~~le--~~l 75 (175)
T Consensus 13 ~~~~~~~~~---~~~~~~a~~~~~~~~~e~ed~~~~~~~~~~~~~~e~~k~~~~i~da~~dq~~~~q~e~~~~lk~~a~~ 89 (192)
T COG3334 13 ILIPSRFLL---LLASAFALFAAKPVGAEAEDAAAELAEKKAAAQSEIEKFCANIADAAADQLYALQKELLEKLKDLAEV 89 (192)
T ss_pred HHHHHHHHH---HHHHHHHHHHHCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 974489999---99999999872442100032654200223033307788878899999999999888899998888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCH
Q ss_conf 9999999999999999999999999--9999-999999951998999999963798999999972998999999962999
Q gi|254780375|r 76 EQRVILLENHKKEYNLWFQKYDSFI--MSYN-KNILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNP 152 (175)
Q Consensus 76 ~~r~~eLe~~~~ei~~~l~~~~~~~--~~~~-~~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p 152 (175)
T Consensus 90 ~E~lk~lE~~kae~k~~~e~re~~l~~~qae~~klv~iY~~Mkp~~aA~~le~l~~e~Aa~Il~~L~~r~~~~ILakMdP 169 (192)
T COG3334 90 NERLKALEKKKAELKDLEEEREGILRSKQAEDGKLVKIYSKMKPDAAAAILENLPDEEAAAILMKLKPRKLGLILAKMDP 169 (192)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCH
T ss_conf 99999999989999999999989988778656279999980791668999983898889999983882189999873898
Q ss_pred HHHHHHHHHHHCCCCCH
Q ss_conf 99999999995271121
Q gi|254780375|r 153 KSATMITNVVANMLKFK 169 (175)
Q Consensus 153 ~~Aa~it~~la~~~~~~ 169 (175)
T Consensus 170 ekAA~lt~~i~~~~~~~ 186 (192)
T COG3334 170 EKAATLTELIASPPRNN 186 (192)
T ss_pred HHHHHHHHHHHCCCCCC
T ss_conf 88999999986578766