HHsearch alignment for GI: 254780376 and conserved domain: pfam02119
>pfam02119 FlgI Flagellar P-ring protein.
Probab=100.00 E-value=0 Score=959.51 Aligned_cols=340 Identities=56% Similarity=0.857 Sum_probs=331.9
Q ss_pred HHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
Q ss_conf 10001364000143026787887638899988774689999999999829745732146553269999997178775687
Q gi|254780376|r 25 RIKDVVSLQSGRDNQLIGYGLVVGLQGTGDSLRSSPFTEQSMRSLLQNLGISTPGGRLGSKNVAAVMVTANLPPFASPGS 104 (369)
Q Consensus 25 rikDi~~i~GvR~NqL~GyGLVVGL~GTGD~~~~~~~t~qsl~nml~~~Gv~~~~~~~~~kNvAaVmVtA~lPpfa~~G~ 104 (369)
T Consensus 1 RikDi~~v~GvR~NqLiGYGLVVGL~GTGD~~~~~~fT~qsl~nmL~~~Gv~v~~~~i~~kNvAaVmVTA~lPpfa~~G~ 80 (342)
T pfam02119 1 RIKDIASIEGVRDNQLVGYGLVVGLNGTGDSLTQSPFTEQSLANMLERLGVNIPPNNIKSKNVAAVMVTATLPPFAKPGQ 80 (342)
T ss_pred CCCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 94110005213554457789998238878887677308999999999759776866676542699999987277568998
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCC
Q ss_conf 68999956888454447779995214778618999816168334324567652004765421741654887413543247
Q gi|254780376|r 105 RIDVSINSLGDASSLRGGILVMTSLLGADGNIYAVAQGSVVVSGLFVKGQSSSFMEGISTGGKIVNGAIVERELPKKFKD 184 (369)
Q Consensus 105 ~iDv~VSSiGdAkSL~GG~LL~TpL~g~dg~vyAvAQG~i~vgg~~~~g~~~~~~~n~~t~GrIp~Ga~VErev~~~f~~ 184 (369)
T Consensus 81 ~iDVtVSSiGdAkSL~GGtLL~TPL~gadg~vYAvAQG~v~vgg~~~~~~g~~~~~n~pt~GrIp~GA~VErev~~~~~~ 160 (342)
T pfam02119 81 RIDVTVSSIGDAKSLRGGTLLMTPLKGADGEVYAVAQGNLVVGGFGAEGAGSSVTVNVPTVGRIPNGAIVEREVPFDFGQ 160 (342)
T ss_pred EEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCEECCCCCCEEECCCEEEEECCCCCCCC
T ss_conf 48899976657656789778985224899878999407678724113577751110577603865862999715777677
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCC-CHHHHHHHHHCCCCCCCCCCEEEEECC
Q ss_conf 7649999507887899999999987520245654124511563686328875-212132232201268789835999447
Q gi|254780376|r 185 SADLILQLRNPDFSTAIRIADQINSYSLNRFSRPIAEAYDSRTVKVSKPTNI-DLTRLMSEVEMLTVETDTPARVIINER 263 (369)
Q Consensus 185 ~~~l~L~L~~pdfttA~~ia~aIN~~~~~~~g~~~A~a~d~~~I~v~~P~~~-~~v~fla~ie~l~V~~~~~akVVINer 263 (369)
T Consensus 161 ~~~l~l~L~~pdFtTA~ria~aIN~~----~g~~~A~a~D~~tV~v~~P~~~~~~v~fla~ie~l~V~p~~~arVVINeR 236 (342)
T pfam02119 161 GDSLTLNLRNPDFTTANRIADAINAR----FGPGVARALDARTIEVRAPRDYSQRVSFLAEIENLEVEPDAPAKVVINER 236 (342)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHH----HCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECC
T ss_conf 97289996698769999999999886----18895498579889996688854178999998538466788876999578
Q ss_pred CCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCE-EEECCCCCHHHHHHHHHHC
Q ss_conf 634994597399899984170799963776665776545687344236641456046735-8973898899999999847
Q gi|254780376|r 264 TGTIVIGDNVRISKVVVSYGNLTVQITENEQVVQPNAFSSNGSTVTQNNTDLKVSDNKGS-FSLIDAPDLNSLISGMNSI 342 (369)
Q Consensus 264 TGTIV~g~~V~I~pvaVsHGnLtI~I~~~~~vsqp~~~~~~g~t~~~~~t~i~v~e~~~~-~~~~~~~tl~~lV~ALN~l 342 (369)
T Consensus 237 TGTIV~g~~V~I~~vaVshGnLtv~I~~~~~vsQP~pf-~~g~tvv~~~t~i~v~e~~~~~~~~~~~~tl~~lV~aLN~l 315 (342)
T pfam02119 237 TGTIVIGQNVRISPVAVSHGNLTVTITETPQVSQPNPF-SGGQTVVVPRTDIDVEEEGGRLFVLPPGASLADLVRALNAL 315 (342)
T ss_pred CCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCCCC-CCCCEEECCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHC
T ss_conf 54199679669968899508679996267522478877-89831653786026640676069708999599999999866
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 998789999999998716856258969
Q gi|254780376|r 343 GLKTDGIISILQGIKAAGALQSEIIIQ 369 (369)
Q Consensus 343 G~tp~DlIsILqalk~aGAL~AELiI~ 369 (369)
T Consensus 316 Gatp~DlIaILqalK~aGAL~AeL~ii 342 (342)
T pfam02119 316 GATPRDLIAILQALKAAGALHAELEVI 342 (342)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 998799999999998778870789969