HHsearch alignment for GI: 254780377 and conserved domain: COG3745

Probab=98.61  E-value=1.1e-07  Score=61.80  Aligned_cols=102  Identities=17%  Similarity=0.238  Sum_probs=79.2

Q ss_pred             EEEEEEEEEEEECCCCCCCCHHHEEEEEEEHHHCCCCCCCCHHH------HHCEEEECCCCCCCCCCHHHCCCCCCCCCC
Q ss_conf             86788877520048996618743799996820178421158677------303012102270000156640232100379
Q gi|254780377|r   23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD------VVGLVTRRVLLPDHVIPLSVLHRPYVISRG   96 (152)
Q Consensus        23 ~~~~~vvVa~r~I~~G~~I~~~Dl~~~~~~~~~~~~~~~~~~~~------~iG~~a~r~i~~G~~i~~~~l~~~~~V~~G   96 (152)
T Consensus        43 ~~~~~VlVA~~~L~~G~~L~~d~l~~~~WP~~~vp~gais~~~~pda~~~l~G~iv~~pi~~GEPVl~~Kl~~~-----g  117 (276)
T COG3745          43 KPTKPVLVAAVDLPVGQRLSADQLRWQPWPADSVPAGAISRENAPDALTGLAGRIVRVPIGAGEPVLPSKLSGP-----G  117 (276)
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHHHCCC-----C
T ss_conf             86336899931455677325142046666666788431035555411232268258621358985317650588-----8


Q ss_pred             CE-EEEEEECC--CEEEEEEEEECCCCCC--CCEEEEE
Q ss_conf             87-99999769--7899999999244888--9779999
Q gi|254780377|r   97 AK-VRIILTQG--NMTISTAGIALSDASI--GDVIAVK  129 (152)
Q Consensus        97 ~~-V~i~~~~g--~~~i~~~g~Al~~g~~--Gd~IrV~  129 (152)
T Consensus       118 ~~~LS~~L~~GkRAvai~V~~v~gvGGFVlPgDrVDVi  155 (276)
T COG3745         118 TRTLSSVLPPGKRAVAIRVDEVVGVGGFVLPGDRVDVI  155 (276)
T ss_pred             CCHHHHHCCCCCEEEEEEEEEEEECCCEECCCCEEEEE
T ss_conf             63014430899626889975431002232589737899