HHsearch alignment for GI: 254780377 and conserved domain: PRK06005
>PRK06005 flgA flagellar basal body P-ring biosynthesis protein FlgA; Reviewed.
Probab=100.00 E-value=6.4e-34 Score=206.60 Aligned_cols=133 Identities=44% Similarity=0.707 Sum_probs=125.2
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCHHHEEEEEE-EHHHCCCCCCCCHHHHHCEEEECCCCCCCCCCHHHCCCCCCCCCCCE
Q ss_conf 77886788877520048996618743799996-82017842115867730301210227000015664023210037987
Q gi|254780377|r 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98 (152)
Q Consensus 20 ~~~~~~~~vvVa~r~I~~G~~I~~~Dl~~~~~-~~~~~~~~~~~~~~~~iG~~a~r~i~~G~~i~~~~l~~~~~V~~G~~ 98 (152)
T Consensus 28 ~~~~~~~~~~VP~~tIypGe~I~~~~L~~~~~~~~~~~~~~~~~d~~~vIG~~ArRtL~pGrpI~~~~L~~P~lV~RG~~ 107 (161)
T PRK06005 28 AAADEIAFAVVPSTTIYPGETISDSMLLEVQFVINPPAAAQYVLSIDQVVGKVARRTLLPGRPIPVSALREPSLVTRGSP 107 (161)
T ss_pred HHHCCCCCCCCCCEEECCCCCCCHHHCEEEECCCCCCCCCCCCCCHHHHCCCEEEEEECCCCEECHHHCCCCCEECCCCE
T ss_conf 13336674657722467887808667335503248631134018987917805898515987618788588558858998
Q ss_pred EEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEEC
Q ss_conf 999997697899999999244888977999988998889999972998999979
Q gi|254780377|r 99 VRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 (152)
Q Consensus 99 V~i~~~~g~~~i~~~g~Al~~g~~Gd~IrV~N~~S~k~v~g~V~~~~~V~V~~~ 152 (152)
T Consensus 108 V~lv~~~GgL~Ita~G~ALe~G~~Gd~IrV~N~~Sg~iV~G~V~~~G~V~V~~k 161 (161)
T PRK06005 108 VKLVFEAGGLTITAAGTPLQSGSAGDLIRVRNVDSGVIVSGTVLADGTIQVGAK 161 (161)
T ss_pred EEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEEC
T ss_conf 999996499999998989567789998999988999989999936977999539