BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring
biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str.
psy62]
         (152 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040054|gb|ACT56850.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 152

 Score =  299 bits (765), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY
Sbjct: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA
Sbjct: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK
Sbjct: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152


>gi|315121846|ref|YP_004062335.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495248|gb|ADR51847.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 149

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 122/149 (81%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R       YV  L+++ A+ +G AVVPSVVINAGEVL+E +LKE+ VTNSN+RGNYA  
Sbjct: 1   MRLFQVCLFYVFCLNAVLANGLGRAVVPSVVINAGEVLSELKLKELDVTNSNLRGNYARY 60

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           IKDV GLVTRR LLPD +I LS LHRPYVISRG KVRIIL QGNMTIS AG+ALSDAS+G
Sbjct: 61  IKDVKGLVTRRTLLPDRIILLSALHRPYVISRGDKVRIILNQGNMTISAAGVALSDASVG 120

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           D I+VKNIDTGV+VSGS +D GTVR+++K
Sbjct: 121 DAISVKNIDTGVIVSGSALDAGTVRIIIK 149


>gi|222084866|ref|YP_002543395.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722314|gb|ACM25470.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 166

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 101/150 (67%), Gaps = 3/150 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
            V F   FS     +D    + +G AVVP+ VI  G+++   +L+E+ VTN N+ G+YA 
Sbjct: 20  SVMFAPAFSAGATGVD---GTGMGTAVVPTEVIYPGDIIGSGQLEEVDVTNPNLSGDYAR 76

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +I+DV G V++R LLP   I +S L +P+ ++RG+  R++++ G+MTI+ AG  L D ++
Sbjct: 77  TIRDVTGRVSKRTLLPGRTISISALRQPFAVTRGSNARLVMSMGSMTITAAGTPLDDGAV 136

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           GD +  +N+D+G++V+G+V++ GT+RVV K
Sbjct: 137 GDSVRARNLDSGIIVNGTVLENGTIRVVSK 166


>gi|86356313|ref|YP_468205.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli CFN 42]
 gi|86280415|gb|ABC89478.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 160

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 90/128 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V GLV++R LLP   I +
Sbjct: 33  MGYAVVPTTIIYPGDTLSGSQLQEVEVTNPNLAGDYAKSISQVEGLVSKRTLLPGRTISV 92

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  PY ++RG+ +R++ + G MTIS AG  L D + G V+  +N+D+GV+VSG+V+  
Sbjct: 93  SALREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQVVRARNMDSGVIVSGTVLAD 152

Query: 145 GTVRVVVK 152
           GT+ V  K
Sbjct: 153 GTIHVRAK 160


>gi|116250483|ref|YP_766321.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255131|emb|CAK06205.1| putative flagellar protein FlgA precursor [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 160

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/128 (46%), Positives = 91/128 (71%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V G+V++R LLP   I +
Sbjct: 33  MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTISV 92

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L   Y ++RG+ +R++L+ G MTIS AG  L D +IG V+  +N+D+GV+VSG+V+  
Sbjct: 93  SGLREAYTVTRGSSIRLVLSLGAMTISAAGTPLEDGTIGQVVRARNMDSGVIVSGTVLAD 152

Query: 145 GTVRVVVK 152
           GTV V  K
Sbjct: 153 GTVHVRAK 160


>gi|222147572|ref|YP_002548529.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
 gi|221734560|gb|ACM35523.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
          Length = 159

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 91/126 (72%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           +A+VP+  I  GE ++ ++L  +QVTN N+ G +A  + DVVG+++ + LLP   IPL+ 
Sbjct: 34  YAIVPTDTIYPGEAISSNKLDRVQVTNPNLAGGFASDMADVVGMLSTKTLLPGRTIPLAT 93

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L RPY + RG+++R+I   GN+TIS +G  + DA+IGDVI V+N+D+G +VSG+V+  GT
Sbjct: 94  LKRPYAVIRGSQLRLIFNIGNLTISASGSPMDDANIGDVIRVRNLDSGQIVSGTVMGDGT 153

Query: 147 VRVVVK 152
           V+V+ K
Sbjct: 154 VQVMAK 159


>gi|218672800|ref|ZP_03522469.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli GR56]
          Length = 163

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 90/128 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V GLV++R LLP   I +
Sbjct: 36  MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 95

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+  
Sbjct: 96  SGLREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLAD 155

Query: 145 GTVRVVVK 152
           GTV V  K
Sbjct: 156 GTVHVRAK 163


>gi|190890364|ref|YP_001976906.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695643|gb|ACE89728.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 160

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 90/128 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V GLV++R LLP   I +
Sbjct: 33  MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 92

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+  
Sbjct: 93  SGLREPYTVTRGSSIRLVFSLGPMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLAD 152

Query: 145 GTVRVVVK 152
           GTV V  K
Sbjct: 153 GTVHVRAK 160


>gi|209547929|ref|YP_002279846.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533685|gb|ACI53620.1| flagella basal body P-ring formation protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 160

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 90/128 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A +I  V GLV++R LLP   I +
Sbjct: 33  MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLSGDFAKTISQVEGLVSKRTLLPGRTISV 92

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+  
Sbjct: 93  SGLREPYTVTRGSSIRLVFSLGAMTISAAGSPLEDGATGQLIRARNMDSGVIVSGTVLAD 152

Query: 145 GTVRVVVK 152
           GTV V  K
Sbjct: 153 GTVHVRAK 160


>gi|241203107|ref|YP_002974203.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856997|gb|ACS54664.1| flagella basal body P-ring formation protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 160

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 90/128 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V G+V++R LLP   I +
Sbjct: 33  MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTISV 92

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L   Y ++RG+ +R++L+ G +TIS AG  L D + G V+  +N+D+GV+VSG+V+  
Sbjct: 93  SGLREAYTVTRGSSIRLVLSFGALTISAAGTPLEDGTTGQVVRARNMDSGVIVSGTVLAD 152

Query: 145 GTVRVVVK 152
           GTV V  K
Sbjct: 153 GTVHVRAK 160


>gi|325291938|ref|YP_004277802.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium sp. H13-3]
 gi|325059791|gb|ADY63482.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium sp. H13-3]
          Length = 162

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 1/149 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           VR  L  +  + ++   FA     A+VP+  I  GE +   ++K ++VTN NI   YA  
Sbjct: 15  VRMCLASAFSLGAMAPAFAQAP-TALVPTRTIYPGETITPEQVKPVEVTNPNISAGYASD 73

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+++++ LLP   IP++ L  P ++ RG  V+++   GNMT+  +G  +SD S+G
Sbjct: 74  ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           +V+ V+NID+GVMVSG+V+  GT++V+ K
Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162


>gi|2275162|gb|AAB81414.1| FlgA [Sinorhizobium meliloti]
          Length = 168

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 83/125 (66%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AV+P   I  GE L+ S L+ + VTN ++R  Y HSI +V G+VT+R LLP  VI  S L
Sbjct: 44  AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVHSIDEVDGMVTKRTLLPGRVILASAL 103

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + RG+ VR++   G +TI+ AG  L DA++GD+I V+N+DTGV+VSG+V+   T+
Sbjct: 104 REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 163

Query: 148 RVVVK 152
            VV K
Sbjct: 164 HVVAK 168


>gi|159184363|ref|NP_353578.2| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium tumefaciens str. C58]
 gi|3913663|sp|Q44339|FLGA_AGRT5 RecName: Full=Flagellar protein flgA; Flags: Precursor
 gi|1086562|gb|AAB68969.1| orfA; No significant homologies in the database; Method: conceptual
           translation supplied by author [Agrobacterium
           tumefaciens]
 gi|2459715|gb|AAB71791.1| FlgA [Agrobacterium tumefaciens]
 gi|159139677|gb|AAK86363.2| flagellar protein FLGA precursor [Agrobacterium tumefaciens str.
           C58]
          Length = 162

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 85/125 (68%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A+VP   I  GE ++  ++K ++VTN NI   YA  I +V G+++++ LLP   IP++ L
Sbjct: 38  ALVPVRTIYPGEAISPEQVKSVEVTNPNISAGYASDISEVEGMISKQTLLPGRTIPIAAL 97

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++ RG  V+++   GNMT+  +G  +SD S+G+V+ V+NID+GVMVSG+V+  GT+
Sbjct: 98  REPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLGEVVRVRNIDSGVMVSGTVMKDGTI 157

Query: 148 RVVVK 152
           +V+ K
Sbjct: 158 QVMAK 162


>gi|307311558|ref|ZP_07591199.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti BL225C]
 gi|307318913|ref|ZP_07598344.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti AK83]
 gi|306895327|gb|EFN26082.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti AK83]
 gi|306899575|gb|EFN30204.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti BL225C]
          Length = 157

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 82/125 (65%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AV+P   I  GE L+ S L+ + VTN ++R  Y  SI +V G+VT+R LLP  VI  S L
Sbjct: 33  AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSIDEVDGMVTKRTLLPGRVILASAL 92

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + RG+ VR++   G +TI+ AG  L DA++GD+I V+N+DTGV+VSG+V+   T+
Sbjct: 93  REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 152

Query: 148 RVVVK 152
            VV K
Sbjct: 153 HVVAK 157


>gi|15964416|ref|NP_384769.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium meliloti 1021]
 gi|17380481|sp|Q52947|FLGA_RHIME RecName: Full=Flagellar protein flgA; Flags: Precursor
 gi|15073593|emb|CAC45235.1| Flagellar precursor transmembrane protein [Sinorhizobium meliloti
           1021]
          Length = 168

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 82/125 (65%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AV+P   I  GE L+ S L+ + VTN ++R  Y  SI +V G+VT+R LLP  VI  S L
Sbjct: 44  AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSIDEVDGMVTKRTLLPGRVILASAL 103

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + RG+ VR++   G +TI+ AG  L DA++GD+I V+N+DTGV+VSG+V+   T+
Sbjct: 104 REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 163

Query: 148 RVVVK 152
            VV K
Sbjct: 164 HVVAK 168


>gi|150395486|ref|YP_001325953.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium medicae WSM419]
 gi|150027001|gb|ABR59118.1| SAF domain protein [Sinorhizobium medicae WSM419]
          Length = 169

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 82/125 (65%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AV+P   I  GE L+ S L+ + VTN ++R  Y  S+ +V G+VT+R LLP  VI  S L
Sbjct: 45  AVIPKQTIYPGETLDASMLEVVDVTNPDLRDGYVRSLDEVDGMVTKRTLLPGRVILASAL 104

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + RG+ VRI+ + G +TI+ AG  L D +IG++I V+NIDTGV+VSG+V+   T+
Sbjct: 105 REQYAVERGSTVRIVFSNGGLTITAAGSPLQDGAIGELIRVRNIDTGVIVSGTVMADSTI 164

Query: 148 RVVVK 152
            VV K
Sbjct: 165 HVVAK 169


>gi|227820859|ref|YP_002824829.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium fredii NGR234]
 gi|227339858|gb|ACP24076.1| SAF domain protein [Sinorhizobium fredii NGR234]
          Length = 169

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 81/125 (64%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AV+P  +I  GE +  S L+ + VTN ++   Y  S+++V G VT+R LLP  VI  S L
Sbjct: 45  AVIPKQIIYPGETIEASMLEVVDVTNPDLADGYIGSLEEVEGKVTKRTLLPGRVILASAL 104

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + RG+ VR+I   G +TI+ AG  L DA++G++I  +NID+GV+VSG+V+  GTV
Sbjct: 105 RDRYAVERGSTVRLIFNNGGLTITAAGSPLEDAAVGELIRARNIDSGVIVSGTVMADGTV 164

Query: 148 RVVVK 152
            VV K
Sbjct: 165 HVVAK 169


>gi|163758016|ref|ZP_02165104.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
           phototrophica DFL-43]
 gi|162284305|gb|EDQ34588.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
           phototrophica DFL-43]
          Length = 160

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 77/127 (60%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G AVVP   I  GE L+   ++E+ VTN N+RG Y  +   V+G VT R LLP   IP  
Sbjct: 34  GTAVVPERTIYPGEELSAELVREVTVTNPNLRGGYVTTTTGVLGKVTTRTLLPGRTIPAG 93

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           VL   + + RG  V ++ +   +TI+ AG  L + ++GD I V+NI++GV VSG+V+  G
Sbjct: 94  VLRDAWAVERGTTVELVFSGKGLTITAAGTPLQNGAVGDFIRVRNIESGVTVSGTVMADG 153

Query: 146 TVRVVVK 152
           T++V  K
Sbjct: 154 TIQVAPK 160


>gi|218507130|ref|ZP_03505008.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli Brasil 5]
          Length = 109

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 66/93 (70%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V GLV++R LLP   I +
Sbjct: 17  MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 76

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           S L  PY ++RG+ +R++ + G MTIS AG  L
Sbjct: 77  SGLREPYTVTRGSSIRLVFSLGPMTISAAGTPL 109


>gi|110632655|ref|YP_672863.1| flagellar protein FlgA [Mesorhizobium sp. BNC1]
 gi|110283639|gb|ABG61698.1| flagellar protein FlgA [Chelativorans sp. BNC1]
          Length = 157

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           VVP+ VI  GE ++   L+EM +     RG  + A +  D+ G V RR LLP  +IPLS 
Sbjct: 33  VVPTRVIYPGETVSAEALQEMMLRQPP-RGAASIARTPGDLEGKVARRTLLPGRLIPLSY 91

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  PY++ +G+ V  + T G +TIS   + L   + GD I V+N+D+G + +G V+  GT
Sbjct: 92  VREPYLVEQGSTVTAVFTDGPLTISVLAVPLQPGAAGDFIKVRNVDSGAVFTGIVMQDGT 151

Query: 147 VRV 149
           V+V
Sbjct: 152 VKV 154


>gi|306846277|ref|ZP_07478838.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO1]
 gi|306273272|gb|EFM55141.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO1]
          Length = 160

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAAAQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG  V ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGVPVPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|254720609|ref|ZP_05182420.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|265985649|ref|ZP_06098384.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|306838571|ref|ZP_07471408.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
           2653]
 gi|264664241|gb|EEZ34502.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|306406357|gb|EFM62599.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
           2653]
          Length = 160

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAAAQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +I+RG    ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLITRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|217976226|ref|YP_002360373.1| flagella basal body P-ring formation protein FlgA [Methylocella
           silvestris BL2]
 gi|217501602|gb|ACK49011.1| flagella basal body P-ring formation protein FlgA [Methylocella
           silvestris BL2]
          Length = 148

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 7/137 (5%)

Query: 20  LFASVIGHAV------VPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVT 72
           LF  +  HA       VP++ I  G+ + +  L +      S +RGN   +   ++G + 
Sbjct: 9   LFGRIPAHAAESHALPVPAITIYPGDPIKDEWLVDRDFGATSPLRGNVVTNRSAIIGKIA 68

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           RR LLP   IP +V+    ++  G KVRI+  Q  + I+T G AL D ++GDVI+++NI+
Sbjct: 69  RRTLLPGAPIPANVVAERKIVGNGTKVRIVFEQPGIEIATYGAALQDGALGDVISLRNIE 128

Query: 133 TGVMVSGSVVDTGTVRV 149
           TG+ V+G V   G+VRV
Sbjct: 129 TGLTVTGVVQADGSVRV 145


>gi|182680547|ref|YP_001834693.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182636430|gb|ACB97204.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 166

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 30  VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+  I  G+ + E+ +  +E    ++  RGN       +VG   RR LLP   IP++ L
Sbjct: 42  VPTTTIYPGDTIKEAWIIEREFAANSTYARGNVLTERAALVGKAARRTLLPGVPIPINAL 101

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P  +  GAKVRI+  +  +TI+  G AL   S+GD ++V+N+D+G+ VSG V   G++
Sbjct: 102 SEPKAVLNGAKVRIVFMESGLTITAFGSALQSGSVGDNVSVRNLDSGLTVSGIVQADGSI 161

Query: 148 RV 149
           RV
Sbjct: 162 RV 163


>gi|306841048|ref|ZP_07473772.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO2]
 gi|306288937|gb|EFM60237.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO2]
          Length = 160

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|239834441|ref|ZP_04682769.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
           intermedium LMG 3301]
 gi|239822504|gb|EEQ94073.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
           intermedium LMG 3301]
          Length = 163

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+    G V R+ LLP   I +S L
Sbjct: 39  VVPSATVYPGQIVSDTALLEKQFFINAPAASQYVLSLDQAAGKVARKTLLPGKPILVSAL 98

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 99  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLADGRI 158

Query: 148 RV 149
           +V
Sbjct: 159 QV 160


>gi|153011523|ref|YP_001372737.1| flagellar basal body P-ring biosynthesis protein FlgA [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563411|gb|ABS16908.1| FlgA, flagellar basal-body P-ring formation protein [Ochrobactrum
           anthropi ATCC 49188]
          Length = 160

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S     G V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSPDQAAGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   ++GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAVGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|256014943|ref|YP_003104952.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
           CCM 4915]
 gi|255997603|gb|ACU49290.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
           CCM 4915]
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|225628626|ref|ZP_03786660.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
           str. Cudo]
 gi|237816666|ref|ZP_04595658.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           str. 2308 A]
 gi|225616472|gb|EEH13520.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
           str. Cudo]
 gi|237787479|gb|EEP61695.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           str. 2308 A]
 gi|326410336|gb|ADZ67400.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis M28]
 gi|326553628|gb|ADZ88267.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis M5-90]
          Length = 165

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 41  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 100

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 101 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 160

Query: 148 RV 149
           +V
Sbjct: 161 QV 162


>gi|23499917|ref|NP_699357.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis 1330]
 gi|62317104|ref|YP_222957.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269096|ref|YP_418387.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis biovar Abortus 2308]
 gi|161620237|ref|YP_001594123.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           canis ATCC 23365]
 gi|189022369|ref|YP_001932110.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus S19]
 gi|225686013|ref|YP_002733985.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis ATCC 23457]
 gi|254691411|ref|ZP_05154665.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|254695291|ref|ZP_05157119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698166|ref|ZP_05159994.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254702577|ref|ZP_05164405.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|254706291|ref|ZP_05168119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|254711415|ref|ZP_05173226.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|254712014|ref|ZP_05173825.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|254715083|ref|ZP_05176894.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|254731834|ref|ZP_05190412.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|256029955|ref|ZP_05443569.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|256059607|ref|ZP_05449805.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|256111942|ref|ZP_05452893.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|256256597|ref|ZP_05462133.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|256262864|ref|ZP_05465396.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
 gi|260544342|ref|ZP_05820163.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
 gi|260568515|ref|ZP_05838984.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
 gi|260757025|ref|ZP_05869373.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|260759603|ref|ZP_05871951.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|260762611|ref|ZP_05874945.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260882835|ref|ZP_05894449.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|261215660|ref|ZP_05929941.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|261216793|ref|ZP_05931074.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|261313735|ref|ZP_05952932.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|261319023|ref|ZP_05958220.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|261319660|ref|ZP_05958857.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|261323576|ref|ZP_05962773.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|261753157|ref|ZP_05996866.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|265986974|ref|ZP_06099531.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|265993389|ref|ZP_06105946.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|297249953|ref|ZP_06933654.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           bv. 5 str. B3196]
 gi|23463494|gb|AAN33362.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Brucella suis 1330]
 gi|62197297|gb|AAX75596.1| FlgA, flagellar basal-body P-ring formation protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939370|emb|CAJ12318.1| Flageller protein FlgA [Brucella melitensis biovar Abortus 2308]
 gi|161337048|gb|ABX63352.1| FlgA, flagellar basal-body P-ring formation protein [Brucella canis
           ATCC 23365]
 gi|189020943|gb|ACD73664.1| Flageller protein FlgA [Brucella abortus S19]
 gi|225642118|gb|ACO02031.1| flagella basal body P-ring formation protein FlgA [Brucella
           melitensis ATCC 23457]
 gi|260097613|gb|EEW81487.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
 gi|260155180|gb|EEW90261.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
 gi|260669921|gb|EEX56861.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|260673034|gb|EEX59855.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260677133|gb|EEX63954.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|260872363|gb|EEX79432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|260917267|gb|EEX84128.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|260921882|gb|EEX88450.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|261292350|gb|EEX95846.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|261298246|gb|EEY01743.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|261299556|gb|EEY03053.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|261302761|gb|EEY06258.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|261742910|gb|EEY30836.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|262764259|gb|EEZ10291.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|263092699|gb|EEZ16908.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
 gi|264659171|gb|EEZ29432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|297173822|gb|EFH33186.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           bv. 5 str. B3196]
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|260564304|ref|ZP_05834789.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
 gi|265989512|ref|ZP_06102069.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|260151947|gb|EEW87040.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
 gi|263000181|gb|EEZ12871.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 157

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 33  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 92

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 93  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 152

Query: 148 RV 149
           +V
Sbjct: 153 QV 154


>gi|256043074|ref|ZP_05446018.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 159

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 35  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 94

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 95  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 154

Query: 148 RV 149
           +V
Sbjct: 155 QV 156


>gi|163844347|ref|YP_001622002.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis ATCC 23445]
 gi|163675070|gb|ABY39180.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 160

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTVLLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|148558735|ref|YP_001257214.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ovis ATCC 25840]
 gi|148370020|gb|ABQ62892.1| putative flagellar basal-body P-ring formation protein FlgA
           [Brucella ovis ATCC 25840]
          Length = 160

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ L P   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLFPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|17989430|ref|NP_542063.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985307|gb|AAL54327.1| flagella basal body p ring formation protein flga [Brucella
           melitensis bv. 1 str. 16M]
          Length = 137

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 13  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 72

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 73  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 132

Query: 148 RV 149
           +V
Sbjct: 133 QV 134


>gi|256158117|ref|ZP_05456035.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
 gi|256252929|ref|ZP_05458465.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|261220020|ref|ZP_05934301.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|265996634|ref|ZP_06109191.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
 gi|260918604|gb|EEX85257.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|262550931|gb|EEZ07092.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
          Length = 160

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           V+P   +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VMPLATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RV 149
           +V
Sbjct: 156 QV 157


>gi|323139655|ref|ZP_08074697.1| flagella basal body P-ring formation protein FlgA [Methylocystis
           sp. ATCC 49242]
 gi|322395087|gb|EFX97646.1| flagella basal body P-ring formation protein FlgA [Methylocystis
           sp. ATCC 49242]
          Length = 159

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 12/151 (7%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIR-GNYA 61
           VR   FF +  ++L  + A      V VP V I  G+ + +  L+E      N R  N A
Sbjct: 9   VRSFTFFVVASMTLTLVAARAQESQVPVPRVTIYPGDQITDQVLEE-----KNYRLPNGA 63

Query: 62  HSI-----KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
            ++       +VG V RR LLP   IP   +  P+V+  GA+VRI+ ++G M I+T G+A
Sbjct: 64  DALVFLSRTGLVGKVARRTLLPGQPIPTIAVDNPHVVKVGAQVRIVFSEGGMQITTYGVA 123

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               ++GDVI V+N ++G+ +SG V   G++
Sbjct: 124 QQSGAVGDVIRVRNQESGLFISGRVQSDGSI 154


>gi|319781680|ref|YP_004141156.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167568|gb|ADV11106.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 175

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           ++PS VI  GE +N + LK++  V   +     A   +++ G V +R LLP   IP + +
Sbjct: 51  LIPSRVIYPGETINLAALKQVTLVVGKHKPEAVATRAEELDGKVAKRTLLPGRYIPSAAI 110

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              +++ +GA V+I    G +TIS   + L   + GD++ V+NID+G ++SG+V+  GT+
Sbjct: 111 REAWLVEQGASVQIFFIAGGLTISATAVTLQPGAAGDLVKVRNIDSGKILSGTVMADGTI 170

Query: 148 RV 149
           +V
Sbjct: 171 QV 172


>gi|27381983|ref|NP_773512.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium japonicum USDA 110]
 gi|27355153|dbj|BAC52137.1| flgA [Bradyrhizobium japonicum USDA 110]
          Length = 175

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 3/123 (2%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+V I AGE++ +  + E +    N+ G   +    + +VG + RR LLP   IP + +
Sbjct: 51  VPAVSIRAGELIRDDMITE-RAFAPNLLGVAQFIEGRQILVGRMARRALLPGQPIPTNSV 109

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P+ ++RGA V++++    ++I T G A+   + G +I V+N DTGV++ G V   GTV
Sbjct: 110 EDPWTVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALIPVRNTDTGVIIRGVVQPDGTV 169

Query: 148 RVV 150
           +VV
Sbjct: 170 KVV 172


>gi|296447437|ref|ZP_06889362.1| flagella basal body P-ring formation protein FlgA [Methylosinus
           trichosporium OB3b]
 gi|296255057|gb|EFH02159.1| flagella basal body P-ring formation protein FlgA [Methylosinus
           trichosporium OB3b]
          Length = 149

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
           P VVI  GE + +  L E +  N    G    +   ++G V RR LLPD  IP+  +  P
Sbjct: 29  PRVVIYPGEAIRDDMLAE-RAFNGGAAGVVVETRSALIGKVARRTLLPDRPIPVMAVDSP 87

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +++  A+V+I+     +TI   G AL    +GD I V+N D+G++V+G V   G++RV
Sbjct: 88  RIVAVNAQVKIVFEVTGLTIVAYGAALQAGGVGDFIRVRNQDSGLVVTGRVQPDGSIRV 146


>gi|13472577|ref|NP_104144.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Mesorhizobium loti MAFF303099]
 gi|14023323|dbj|BAB49930.1| flagellar protein; FlgA [Mesorhizobium loti MAFF303099]
          Length = 174

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           ++P+ VI  GE +  + LK++ +     + +  A   +++ G + +R LLP   IP + +
Sbjct: 50  LIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAAI 109

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              +++ +GA V++    G +TI+   + L   S GD+I V+N D+G ++SG+V+  GT+
Sbjct: 110 REAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTI 169

Query: 148 RV 149
           +V
Sbjct: 170 QV 171


>gi|158422257|ref|YP_001523549.1| flagellar basal-body P-ring formation protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329146|dbj|BAF86631.1| flagellar basal-body P-ring formation protein [Azorhizobium
           caulinodans ORS 571]
          Length = 190

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+V I  G+ +++S L  +   V+ S+ R   A S + ++G V RR L     IP++  
Sbjct: 67  VPAVAIYPGDTISDSMLVDRAYSVSPSD-RVAVATSRQALIGKVARRGLQAGTPIPVNAY 125

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P V+SRG    ++L +G +TIS   +A+ D S+G ++ +KN+D+G++++G+V   G+V
Sbjct: 126 ADPQVVSRGHLAPVVLQEGGLTISGFAMAMEDGSVGKIVRLKNLDSGLIIAGTVQSDGSV 185

Query: 148 RV 149
           RV
Sbjct: 186 RV 187


>gi|163850064|ref|YP_001638107.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium extorquens PA1]
 gi|240137198|ref|YP_002961667.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens AM1]
 gi|254559210|ref|YP_003066305.1| flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens DM4]
 gi|163661669|gb|ABY29036.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium extorquens PA1]
 gi|240007164|gb|ACS38390.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens AM1]
 gi|254266488|emb|CAX22252.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens DM4]
          Length = 164

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+V I  G+ + ES L+ MQ   +  R   A   +   + G V RR+LLP   +P++ +
Sbjct: 41  VPTVTIYPGDTIKESMLR-MQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAV 99

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  ++ G+V+  G +
Sbjct: 100 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRI 159

Query: 148 RV 149
           R+
Sbjct: 160 RI 161


>gi|218528667|ref|YP_002419483.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
 gi|218520970|gb|ACK81555.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
          Length = 164

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+V I  G+ + ES L+ MQ   +  R   A   +   + G V RR+LLP   +P++ +
Sbjct: 41  VPTVTIYPGDTIKESMLR-MQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAV 99

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  ++ G+V+  G +
Sbjct: 100 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRI 159

Query: 148 RV 149
           R+
Sbjct: 160 RI 161


>gi|260466618|ref|ZP_05812806.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           opportunistum WSM2075]
 gi|259029624|gb|EEW30912.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           opportunistum WSM2075]
          Length = 182

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIPLSVL 87
           ++P+ VI  GE +  + LK++ +     +     ++ +++ G V +R LLP   IP + +
Sbjct: 58  LIPNRVIYPGETIELTALKQVTLIPGKHKPEAMATVAEELQGKVAKRTLLPGRYIPSTAI 117

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              +++ +GA V++    G +TIS   + L   S GD+I V+N D+G ++SG+V+  GT+
Sbjct: 118 RDAWLVEQGAAVQVFFISGGLTISATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTI 177

Query: 148 RV 149
           +V
Sbjct: 178 QV 179


>gi|170741837|ref|YP_001770492.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
 gi|168196111|gb|ACA18058.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
          Length = 176

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+++ E+ L+E     +   R     +   +VG V RR LLP   +P++ + 
Sbjct: 52  VPAVTIYPGDMIKETMLREQSFPPTFRARAAVIDAPLAIVGRVARRTLLPGEPVPVNAVD 111

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++SRG    +I  +  + I+T G  L +  +G+VI V+N DTG +V G V   G +R
Sbjct: 112 DPRLVSRGTPTTMIFEENGLIITTLGTPLQNGGLGEVIRVRNTDTGRIVVGVVQGDGRIR 171

Query: 149 V 149
           +
Sbjct: 172 I 172


>gi|90422611|ref|YP_530981.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisB18]
 gi|90104625|gb|ABD86662.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
          Length = 161

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 9/125 (7%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS---NIRG--NYAHSIKDVVGLVTRRVLLPDHVIPL 84
           VP+ VI  G+++ +    EM +  S   N+ G   +      VVG + RR LLP  +IP+
Sbjct: 38  VPATVIYPGDLIKD----EMIIDRSFAPNLPGVAAFVGDRPAVVGRIARRTLLPGQLIPI 93

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + L    ++SRG+ V++++  G+++I T G +L   S G +I ++N+DTGV + G V   
Sbjct: 94  NALEEQKLVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGSMIQLRNLDTGVTIRGIVQPD 153

Query: 145 GTVRV 149
           G+VR+
Sbjct: 154 GSVRI 158


>gi|118589980|ref|ZP_01547384.1| flagellar basal body P-ring biosynthesis protein A [Stappia
           aggregata IAM 12614]
 gi|118437477|gb|EAV44114.1| flagellar basal body P-ring biosynthesis protein A [Stappia
           aggregata IAM 12614]
          Length = 151

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAV------VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           +L  SL+ L+L  +F++    A       VP   I AG  ++   L E        +  +
Sbjct: 1   MLIRSLF-LALVLVFSTAAARAAGGIDLPVPRQTIQAGTEISHQDLIERSFPTRTAQ-QF 58

Query: 61  AHSIK--DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
           A S     +VG+V RR LLP   +P+S + +P ++ RG   R++  +  + I     AL 
Sbjct: 59  AVSTNRGQLVGMVARRTLLPGQPVPISSVEKPVLVRRGEPARLVFREQGLMIIMQVEALQ 118

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +   G+ + V+N+D+G++VSG V + GT+RV
Sbjct: 119 NGGAGNFVRVRNVDSGLVVSGRVQEDGTIRV 149


>gi|328545504|ref|YP_004305613.1| flagellar basal body P-ring biosynthesis protein-like protein
           [polymorphum gilvum SL003B-26A1]
 gi|326415245|gb|ADZ72308.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 154

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP V I+ G+ +    L E +   +  R  +A   S +D+VG+V RR LLP   +PL  +
Sbjct: 32  VPRVTIHPGDEIGADLLIERRFPANTTR-QFAIVTSPRDLVGMVARRTLLPGQPVPLGAV 90

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               ++ RG   R++  +G + I T   AL     G V+ V+N+D+GV+V+G+V   G++
Sbjct: 91  APVMLVKRGEPARLVFKEGGLFIMTQVEALQSGGAGAVVRVRNVDSGVIVTGTVQADGSI 150


>gi|188579868|ref|YP_001923313.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium populi BJ001]
 gi|179343366|gb|ACB78778.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium populi BJ001]
          Length = 162

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+V I  G+ + +S L+ MQ   +  R   A   +   + G   RR+LLP   +P++ +
Sbjct: 39  VPTVTIYPGDTIKDSMLR-MQAYPATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAV 97

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  +V G+V   G +
Sbjct: 98  DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIVLGTVTADGRI 157

Query: 148 RV 149
           R+
Sbjct: 158 RI 159


>gi|23008124|ref|ZP_00049700.1| COG1261: Flagellar basal body P-ring biosynthesis protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 158

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAV-----------VPSVVINAGEVLNESRLKEMQVTN 53
           R  LF  L +  L    A+   HAV           VP+V I  G+ + E+ L+ MQ   
Sbjct: 3   RTPLFRGLLIACL----AAGPAHAVEGMAGGELMLPVPTVTIYPGDTIKETMLR-MQAYP 57

Query: 54  SNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
           +  R   A   +   + G   RR+LLP   +P++ +  P ++SRG   ++I  +  + I+
Sbjct: 58  ATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAVDDPRLVSRGTPTQMIFEENGLVIT 117

Query: 112 TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             G  L +  +G+ I V+N DT  +V G+V+  G +R+
Sbjct: 118 AIGAPLQNGGLGETIRVRNTDTNRIVLGTVMADGRIRI 155


>gi|294853177|ref|ZP_06793849.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294818832|gb|EFG35832.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 163

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S+   VG V R+ LLP   I +S L  P +++RG    ++ T G +TI+  G  L     
Sbjct: 3   SLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVA 62

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           GD I V+N+D+G++VSG+V+  G ++V
Sbjct: 63  GDFIKVRNVDSGIIVSGTVLANGRIQV 89


>gi|254500840|ref|ZP_05112991.1| flagella basal body P-ring formation protein FlgA [Labrenzia
           alexandrii DFL-11]
 gi|222436911|gb|EEE43590.1| flagella basal body P-ring formation protein FlgA [Labrenzia
           alexandrii DFL-11]
          Length = 152

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   LLFFSLYVLSL-DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           L+ F L +L+   S FA+ I   V    +    E+ +   ++    + +  +   A    
Sbjct: 7   LVAFCLAMLTAAPSAFAASIELPVARQTIPAGSEIGHRDLVERKFPSRTATQFAVASHRS 66

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            +VG VTRR LLP   IP++ + +P ++ RG   R++  +  + I     AL +   G  
Sbjct: 67  QLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGGAGSF 126

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
           + V+N+D+G++VSG V   GT+RV
Sbjct: 127 VRVRNVDSGLVVSGRVQQDGTIRV 150


>gi|90418391|ref|ZP_01226303.1| putative flagellar basal body P-ring formation protein
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90338063|gb|EAS51714.1| putative flagellar basal body P-ring formation protein
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 165

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP+ VI  G+ +    L  K   V +  I G YA     +VG V RR LLP   I LS L
Sbjct: 43  VPTTVIYPGQSVTGPGLHHKAFYVKDDKI-GLYAVDDSALVGRVARRTLLPGKAIRLSDL 101

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++  GA V ++ ++  + I+  G AL  A  G+ + V+N D+G++VSG V   G++
Sbjct: 102 KEPDLVRAGAAVTLVYSEAGLVITGQGTALRSAGAGETVRVRNADSGIIVSGIVSADGSI 161

Query: 148 RV 149
           R+
Sbjct: 162 RI 163


>gi|170748106|ref|YP_001754366.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170654628|gb|ACB23683.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 142

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP   I AG+V+  + L+E         R   A +    VG + RR LLP   IP   L 
Sbjct: 19  VPVATIYAGDVIKPTMLREQAFPEGYRPRLPVADTAARAVGRIARRTLLPGETIPSIALE 78

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              +++RGA   I+  +  +TIST G AL++A++ + + V+N  TG +V G V   G VR
Sbjct: 79  EAKLVTRGAPAVIVFEEHGVTISTVGTALANAAVNEAVNVRNAATGRVVQGIVQPDGRVR 138


>gi|319405402|emb|CBI79021.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
           AR 15-3]
          Length = 152

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           +VP   I AG+ +++  L E      S+    Y   +K ++  V +R L     I LS L
Sbjct: 29  LVPDKSIYAGQRISDIGLSEKHFFIKSDAASLYVMDMKQILHKVAKRTLTAGRPISLSSL 88

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+G +V+G+V+  G V
Sbjct: 89  GDPVLVERGQATKLIFQAHNLQITALGVVLQSGSSGDVIRVRNSDSGRVVTGTVLQNGDV 148

Query: 148 RV 149
           RV
Sbjct: 149 RV 150


>gi|319898638|ref|YP_004158731.1| flagella basal body P-ring formation protein FlgA [Bartonella
           clarridgeiae 73]
 gi|319402602|emb|CBI76147.1| Flagella basal body P-ring formation protein FlgA [Bartonella
           clarridgeiae 73]
          Length = 152

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +A  IG  +VP   I AG+ +++  L E      S+    Y   +K ++  V +R L   
Sbjct: 22  YADRIGF-LVPDKSIYAGQRISDIGLSERHFFIKSDAASLYVTDMKQILHKVAKRTLTAG 80

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS L  P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+G +V+G
Sbjct: 81  RPIALSSLGDPVLVERGQATKLIFQTHNLKITALGVVLQSGSSGDVIRVRNSDSGRVVTG 140

Query: 140 SVVDTGTVRV 149
           +V+  G VRV
Sbjct: 141 TVLQNGDVRV 150


>gi|312115248|ref|YP_004012844.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220377|gb|ADP71745.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 155

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP   +  G+V+ E  L   Q++ +     +      VVG  +RR LLP   IP   +  
Sbjct: 35  VPKRALYPGDVITEEMLTSKQLSENENASAFITEASGVVGKTSRRTLLPGLPIPKVAIRE 94

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P V+ +G  V ++     + I+   +AL   S+G+ I+ +N D+GV++ G V+  G+VRV
Sbjct: 95  PVVVRQGKAVSLVYESDTVRITGLAMALQSGSVGETISARNPDSGVVIHGVVMADGSVRV 154


>gi|218460754|ref|ZP_03500845.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
          etli Kim 5]
          Length = 95

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 46/63 (73%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
          +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V GLV++R LLP   I +
Sbjct: 33 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 92

Query: 85 SVL 87
          S L
Sbjct: 93 SGL 95


>gi|319406977|emb|CBI80614.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
           1-1C]
          Length = 152

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +A  IG  +VP   I AG+ +++  L E      S+    Y   +K ++  V +R L   
Sbjct: 22  YADRIGF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAVSLYVTDMKQILHKVAKRTLTAG 80

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS L  P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+G +V+G
Sbjct: 81  RPISLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQSGSSGDVIRVRNSDSGRVVTG 140

Query: 140 SVVDTGTVRV 149
           +V+  G VRV
Sbjct: 141 TVLQNGDVRV 150


>gi|121602252|ref|YP_989399.1| flagellar basal body P-ring biosynthesis protein FlgA [Bartonella
           bacilliformis KC583]
 gi|120614429|gb|ABM45030.1| flagella basal body P-ring formation protein FlgA [Bartonella
           bacilliformis KC583]
          Length = 152

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIKDV 67
           FFSL +L+  + +A  +   +VP   I  G+ +++  L E   +  S     Y   +K V
Sbjct: 12  FFSLCLLT--AAYADRVSF-LVPERSIYVGQRVSDVGLSEKNFIIKSEAASLYVIDMKQV 68

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +  V  R L     I L+ L  P ++ RG  +++I    N+ I+  G+ L   S GDV+ 
Sbjct: 69  LNKVATRPLRAGRPIALTALGDPVLVERGQTIKLIFQSDNLQITAIGVVLQSGSSGDVVR 128

Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
           V+N D+G +V G+V+  G+VRV
Sbjct: 129 VRNADSGRIVMGTVLQNGSVRV 150


>gi|319403962|emb|CBI77550.1| Flagellar protein flgA (fragment) [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 109

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 51/90 (56%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y   +K ++  V +R L     IPLS L  P ++ RG   ++I    N+ I+  G+ L  
Sbjct: 18  YVTDMKQILHKVAKRTLTAGRPIPLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQS 77

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            S GDVI V+N D+G +V+G+V+  G VRV
Sbjct: 78  GSSGDVIRVRNSDSGRVVTGTVLQNGDVRV 107


>gi|327478805|gb|AEA82115.1| SAF domain-containing protein [Pseudomonas stutzeri DSM 4166]
          Length = 267

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++L V S  S++   + HA     +I  G+ L    L+   +     +  Y H +++V G
Sbjct: 130 WTLEVTSQPSVWLPAV-HA---QGIIERGQTLGRDDLRLEPINIGKAQRGYFHRLEEVQG 185

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  +R +     +  S+L +P  + RG  V+I+ +   +  ST G AL+D   G+VI V+
Sbjct: 186 MAAKRRIRAGQTLTPSLLAQPLAVRRGQPVKIVASHDGIEASTNGEALADGQPGEVIRVR 245

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +G ++   VV+ G V
Sbjct: 246 NVRSGKVIDAKVVEEGVV 263


>gi|296283229|ref|ZP_06861227.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Citromicrobium bathyomarinum JL354]
          Length = 156

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 5/136 (3%)

Query: 19  SLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +L A   G  VV  V+   I  G++L+E      +VT +  RG+ A   +   G+  RR 
Sbjct: 22  ALHAQSTGDGVVADVLTRPIQRGDLLSERDFAPEEVTAAQARGSLA--AQQAAGMEARRT 79

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L     +  S L  P ++ RG  V+I + +G +TI+  G AL+DA++G+ + V +  T  
Sbjct: 80  LRAGMPVRASDLAEPRLVKRGETVKISVREGALTITAMGRALADAALGEQVRVFSEATNQ 139

Query: 136 MVSGSVVDTGTVRVVV 151
            + G V   GTVRV+ 
Sbjct: 140 TLQGVVEGAGTVRVLA 155


>gi|319409186|emb|CBI82830.1| Flagella basal body P-ring formation protein FlgA [Bartonella
           schoenbuchensis R1]
          Length = 152

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           +VP+  + AG+ +++  L E      S     YA  +  ++  V +R L     I L+ L
Sbjct: 29  IVPNKSVYAGQRVSDVGLSEKSFFIKSEAASLYATQMNQLLNKVAKRTLTAGRPISLASL 88

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++ RG   ++I    N+ I+  G+ L   S GD+I V+N D+G +V G+V+  G V
Sbjct: 89  GDPVLVERGQTTKLIFQMNNLQITALGVVLQSGSSGDLIRVRNADSGRIVMGTVLQNGDV 148

Query: 148 RV 149
           RV
Sbjct: 149 RV 150


>gi|121534937|ref|ZP_01666756.1| SAF domain [Thermosinus carboxydivorans Nor1]
 gi|121306536|gb|EAX47459.1| SAF domain [Thermosinus carboxydivorans Nor1]
          Length = 245

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I A E+L    L+  +     +   Y    + V+GL  RR L P  VI  SVL +P +I 
Sbjct: 125 IAAWEILTADSLQRERRDVGKLASGYITDEQKVLGLAARRSLTPGAVITDSVLAKPVLIR 184

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           RG  + II   G + +  AG AL D + G VI V+NI +  ++S  V+D  +
Sbjct: 185 RGQLIAIIARSGGIEVVAAGQALQDGAEGQVIRVQNIQSKKILSAQVLDNAS 236


>gi|304310781|ref|YP_003810379.1| Flageller protein FlgA [gamma proteobacterium HdN1]
 gi|301796514|emb|CBL44722.1| Flageller protein FlgA [gamma proteobacterium HdN1]
          Length = 227

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 27  HAVVPSVVINAGEVLNES--RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +AV+  + I+ G++++     L+E ++T S   G Y   I D  GL+ +R +  + V+  
Sbjct: 103 NAVIAKIPISRGQIIDTQAVELRETEITPS-ASGFYTR-ISDTKGLLAKRSIAANQVLTH 160

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           ++L  P VI RG  V I       +I TAG+AL+  +IG+++ VKN  +G  V G+++  
Sbjct: 161 TMLKNPDVIQRGQAVIIEAGNTQFSIRTAGVALASGAIGEIVRVKNSTSGRTVEGTIISD 220

Query: 145 GTVRV 149
            T+ +
Sbjct: 221 NTINI 225


>gi|289208108|ref|YP_003460174.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
           sp. K90mix]
 gi|288943739|gb|ADC71438.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
           sp. K90mix]
          Length = 244

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+YV      +A V+    V S  +     +    L+  ++  S   G+Y  S  ++VG
Sbjct: 107 WSIYVPVTVERYAEVL----VASRTLRRQHTILPGDLRTKRIQTSRHAGSYFESKNELVG 162

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L TRR +    ++    + +  V+SRG +V I+   G++ I   G AL +  +GD I VK
Sbjct: 163 LQTRRNIRSGQILGQQHVTQREVVSRGQRVTILAENGSVVIRMQGEALENGILGDRIRVK 222

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +V G V+++G VRV
Sbjct: 223 NSSSGRVVEGEVLESGHVRV 242


>gi|157147106|ref|YP_001454425.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
           koseri ATCC BAA-895]
 gi|157084311|gb|ABV13989.1| hypothetical protein CKO_02883 [Citrobacter koseri ATCC BAA-895]
          Length = 263

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G+VL+ S +   ++  S+ RGNY     + +GL  +R +     I L+ L  P ++ 
Sbjct: 143 LERGQVLSASDVSIKKLNISSTRGNYLTDPDEAIGLTVKRRIRELQPITLTQLESPVLVE 202

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           RG +V +I  QG +   T G A+     G++I VKN  +  +VS  V D G V++V
Sbjct: 203 RGQRVLMIAEQGGVEARTMGEAMKKGRKGEMIKVKNESSERVVSAIVADAGVVKMV 258


>gi|94267695|ref|ZP_01290964.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
 gi|93451897|gb|EAT02628.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
          Length = 242

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G  VV +  IN GE++    L   +   SN+ GN+    ++ VG   R  + P  V+  
Sbjct: 116 MGEVVVSARRINRGELIGSDDLMVQRRNISNLDGNFVSDPREAVGKQLRTTIQPGAVLHQ 175

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L +P ++ RG +VRII  QG + +S  G      + G+++ V+N+ +   +   V+D 
Sbjct: 176 SRLEKPPLVRRGDRVRIIAHQGRVRVSAPGEVRDLGAEGELVRVRNLMSRQEIQARVIDG 235

Query: 145 GTVRVVV 151
            TV  ++
Sbjct: 236 STVETIL 242


>gi|325295400|ref|YP_004281914.1| flagella basal body P-ring formation protein FlgA
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065848|gb|ADY73855.1| flagella basal body P-ring formation protein FlgA
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 321

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+++  S +K  +V +   R + A S+ +V+G + +R +    VI ++ L   YV+ 
Sbjct: 205 IPKGKLITYSDVKIEKVPSKKARKS-AISLNEVIGKIAKRDIKKGEVIKITDLSPNYVVW 263

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           R   V+II    N+ I   GIAL + +IGD+I +KNI TG ++   V+  G V+ V K
Sbjct: 264 RNKPVKIIYDIHNIHIELLGIALENGAIGDIIRIKNISTGKVLICKVIGNGIVKFVYK 321


>gi|218677622|ref|ZP_03525519.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli CIAT 894]
          Length = 66

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 44/66 (66%)

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +   Y ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+  GT
Sbjct: 1   MREAYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLADGT 60

Query: 147 VRVVVK 152
           + V  K
Sbjct: 61  IHVRAK 66


>gi|254473303|ref|ZP_05086700.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
           JE062]
 gi|211957419|gb|EEA92622.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
           JE062]
          Length = 124

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +P+++I  G+ + E  L+E      ++ + +  + ++DVVGL  RR L P   IP + + 
Sbjct: 1   MPAMMIYPGDKIEEGMLREHGFFKKSVAQLSIVNRMQDVVGLEARRTLFPGKPIPKNAVQ 60

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            P V+ RG+ V ++  +  + I     A    +IG  I  +N DTG+ V G V + G++
Sbjct: 61  DPVVVKRGSSVLLVFKEEGLEIRAIVEAQESGAIGANIRARNPDTGLSVLGKVQEDGSL 119


>gi|330830309|ref|YP_004393261.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           veronii B565]
 gi|328805445|gb|AEB50644.1| Flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           veronii B565]
          Length = 227

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G++L+ES+L       + IRG+Y      +VG+ ++R L P   I LS +    V+ 
Sbjct: 114 IAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVGVRSKRELKPGQPIRLSQVC---VVC 170

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +G +V +     N  I T   AL D S G++I + NI +G  V G V   G V V
Sbjct: 171 KGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLVNIRSGKTVEGKVSAVGAVSV 225


>gi|300024605|ref|YP_003757216.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526426|gb|ADJ24895.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 153

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 7/143 (4%)

Query: 4   VRFLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-- 59
           ++ L   +L+VL L    ++   +    VP+ VI  G+++    L + QV  S+  GN  
Sbjct: 2   MKSLALGTLFVLGLAGAASADDALRTVFVPNNVIYPGDMITADALVQRQVRVSS--GNMA 59

Query: 60  -YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
            +  + KD++G + RR LL +  +P S +     + +G   ++I    +++I   GIA  
Sbjct: 60  VFGENPKDLIGKMARRTLLRNEYVPRSAVREQDAVLQGKPYKVIYNSESLSIVGEGIAQK 119

Query: 119 DASIGDVIAVKNIDTGVMVSGSV 141
             ++GD+I+V+N  TGVM    V
Sbjct: 120 AGAVGDIISVRNTATGVMFKARV 142


>gi|307945667|ref|ZP_07661003.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
           TrichSKD4]
 gi|307771540|gb|EFO30765.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
           TrichSKD4]
          Length = 326

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)

Query: 35  INAGEVLNESRLKEMQVTN---SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           + +G+VL   RL++M  T    + +  N     K + GL  R  L  +  +  +   +P 
Sbjct: 197 LRSGQVL---RLEDMTTTRLPRTKVPANAVTDPKQIAGLAARTGLRANMPLVRNDFAKPV 253

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +ISRG KV I    G M ++T G A+ D ++GD I +KN+D+G +V   V   G V
Sbjct: 254 LISRGEKVSITYMVGGMKLTTRGRAMDDGALGDPIDIKNLDSGRIVPAMVRSRGQV 309


>gi|115523180|ref|YP_780091.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisA53]
 gi|115517127|gb|ABJ05111.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53]
          Length = 161

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 50/83 (60%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR LLP  +IP + +    +++RG+ V++++  G ++I T G +L     G  I
Sbjct: 76  VVGRTARRTLLPGRLIPNNAVEDQKIVNRGSVVKVVIEDGALSIVTYGSSLQSGGPGAFI 135

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            ++N+DTGV + G V   G+VR+
Sbjct: 136 QLRNLDTGVTIRGIVQPDGSVRI 158


>gi|302037629|ref|YP_003797951.1| putative flagella basal body P-ring formation protein FlgA
           [Candidatus Nitrospira defluvii]
 gi|300605693|emb|CBK42026.1| putative Flagella basal body P-ring formation protein FlgA
           [Candidatus Nitrospira defluvii]
          Length = 265

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VVP   I   E +    +   ++   +++  +  S  +V+G    R L P + I  + + 
Sbjct: 143 VVPVRSIKVDEEIAADDVTTERIVLYDLKQPFVTSPAEVIGKAAIRPLPPQNAIRTTSVR 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           RP+ + +G +V I   QG ++I T G+  S   +G  I V N+D+G  +  +VV  G VR
Sbjct: 203 RPFAVHKGDRVTIEARQGGLSIQTVGVTKSHGELGQTITVSNVDSGKELRATVVAPGVVR 262

Query: 149 V 149
           V
Sbjct: 263 V 263


>gi|261341498|ref|ZP_05969356.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316294|gb|EFC55232.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
          Length = 261

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 55/116 (47%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
            +  G V+  S +   +   SN+R  Y     DVVGL  +R +     + LS L  P ++
Sbjct: 140 TLERGHVMTASDITRRKFNISNLRSGYITRPDDVVGLTLKRRIRELQPLSLSQLDSPVMV 199

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            RG +V +I  Q  +   T GIA      G++I VKN  +   V+  V+D G VR 
Sbjct: 200 ERGQRVLMIADQDGVEARTMGIASKKGRKGEMIKVKNESSEREVTAMVIDMGVVRT 255


>gi|328543155|ref|YP_004303264.1| flagellar protein FlgA [polymorphum gilvum SL003B-26A1]
 gi|326412901|gb|ADZ69964.1| flagellar protein FlgA [Polymorphum gilvum SL003B-26A1]
          Length = 322

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G +L    L  +++    +      S  ++VGL  R  L P   +  +   RP +++
Sbjct: 193 IGRGSILKPEDLTVIRLPRQRVPSRAVTSPDEIVGLAARTTLRPGQPLSRTDFERPLIVA 252

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           RG KV ++     M ++  G A+S  + GD I V N+ +  +++G+VV  G +RV
Sbjct: 253 RGEKVTLLYEMSGMKLTARGQAMSAGAEGDEIDVMNLQSRRIITGTVVARGQIRV 307


>gi|145298485|ref|YP_001141326.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851257|gb|ABO89578.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 339

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G++L+ES L       + IRG+Y      ++G+ ++R L P   I LS +    V+ 
Sbjct: 226 VAKGDILSESVLTLAYQDQTQIRGDYLSDQAPLIGVRSKRELKPGQPIRLSQV---CVVC 282

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +G +V +     +M I T   AL D S GD+I++ NI +G  V G V   G+V
Sbjct: 283 KGDQVTLSAENSSMQIKTMARALQDGSFGDMISLVNIRSGKTVQGKVSAVGSV 335


>gi|94263286|ref|ZP_01287102.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
 gi|93456369|gb|EAT06493.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
          Length = 242

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G  VV +  IN GE++    L   +   SN+  N+    ++ VG   R  + P  V+  
Sbjct: 116 MGEVVVSARRINRGELIGSDDLMVQRRNISNLDSNFVSDPREAVGKQLRTTIQPGAVLHQ 175

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  P ++ RG +VRII  QG + +S  G      + G+++ V+N+ +   +   V+D 
Sbjct: 176 SRLENPPLVRRGDRVRIIAHQGRVRVSAPGEVRDIGAEGELVRVRNLMSRQEIQARVIDG 235

Query: 145 GTVRVVV 151
            TV  ++
Sbjct: 236 STVETIL 242


>gi|330501133|ref|YP_004378002.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328915419|gb|AEB56250.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 234

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+  L   S+F  V+ HA   + VI  G+ ++  +L+  +V        + +S  +VVG
Sbjct: 96  WSVTALVQASVFLPVV-HA---ARVIERGQTISAEQLQLQEVNIGKAPRGFYNSFDEVVG 151

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I  ++L  P +I RG +V I+ +Q  ++ S  G AL++   GDVI V+
Sbjct: 152 QGAKRRVRAGQLIAPNLLTAPLLIRRGQQVTIVASQDGISASATGEALANGREGDVIRVR 211

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +  ++   VV+ G V
Sbjct: 212 NLGSQKVIEAQVVEDGVV 229


>gi|119477961|ref|ZP_01618061.1| flagellar basal body P-ring biosynthesis protein [marine gamma
           proteobacterium HTCC2143]
 gi|119448874|gb|EAW30116.1| flagellar basal body P-ring biosynthesis protein [marine gamma
           proteobacterium HTCC2143]
          Length = 237

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +SLY+    +L+  V+  A++P   I  G ++    L+  ++  S + G Y  S   V+
Sbjct: 99  LWSLYIPVDVNLYKPVV-TAIIP---IAKGSIVTRESLEMREMNISKLTGTYFVSSDAVI 154

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G+  +R L  +  +  + L +P +I RG  V +    GN+ +   GIAL++   G  I++
Sbjct: 155 GMQAKRPLRANAPVIATHLQQPLLIKRGESVVMTARSGNLVVKIPGIALTNGHRGQQISI 214

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           +N  +  +V G V   G V +V+
Sbjct: 215 RNSQSKRIVEGKVSAQGQVMIVM 237


>gi|311992321|gb|ADQ26734.1| chaperone for P-ring biosynthesis protein [Aeromonas hydrophila]
          Length = 284

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           S  +  G++L+E  L +     + IRG+Y      ++G+ ++R L P   I LS +    
Sbjct: 168 STPVAKGDILSEGVLTQAYQDQTLIRGDYLSDTTALIGVRSKRELKPGQPIRLSQV---C 224

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           V+ +G +V +     +M I T   AL D S GD+I + NI +G  V G V   G+V
Sbjct: 225 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVNAVGSV 280


>gi|83944161|ref|ZP_00956617.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
 gi|83845028|gb|EAP82909.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
          Length = 227

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGL 70
           ++ L++ +L   V    +VP  ++ A +V     L EM +      G+YA +  + +VG 
Sbjct: 94  VWGLAMVTLTVPVPNRRIVPDEIVRAQDV----SLVEMPMQRV---GSYAINEYEQLVGQ 146

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
             RR+L+    +P + +  P +ISRG KV+I LT G + ++  G AL DA  G  + V N
Sbjct: 147 QVRRMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVN 206

Query: 131 IDTGVMVSGSVVDTGTVRVV 150
           + +   +S   +  G V VV
Sbjct: 207 LSSNKALSTIAMAAGVVEVV 226


>gi|148360444|ref|YP_001251651.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila str. Corby]
 gi|296106491|ref|YP_003618191.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148282217|gb|ABQ56305.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila str. Corby]
 gi|295648392|gb|ADG24239.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307609702|emb|CBW99212.1| hypothetical protein LPW_09931 [Legionella pneumophila 130b]
          Length = 233

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+     ++LY+    ++F SV+    V    +  G  ++ S + + ++    ++  Y  
Sbjct: 89  CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
             K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  GIA+ + ++
Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEGAL 204

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           GD + VKN+ +  ++   V    TV+V+
Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVI 232


>gi|146305246|ref|YP_001185711.1| SAF domain-containing protein [Pseudomonas mendocina ymp]
 gi|145573447|gb|ABP82979.1| SAF domain protein [Pseudomonas mendocina ymp]
          Length = 281

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 4/128 (3%)

Query: 22  ASVIGHAVVPSVVINAGEVL--NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           ASV   AV  + VI  G+ +   + +L+E+ V  S+ RG Y+ S+ +VVG   +R +   
Sbjct: 151 ASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSS-RGFYS-SLDEVVGQGAKRRIRAG 208

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            +I  S+L  P ++ RG +V I+  Q  ++ S  G AL +   G+VI V+N+ +  ++  
Sbjct: 209 ALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKVIEA 268

Query: 140 SVVDTGTV 147
            VV+ G V
Sbjct: 269 QVVEEGVV 276


>gi|87119683|ref|ZP_01075580.1| flagellar protein, putative [Marinomonas sp. MED121]
 gi|86165159|gb|EAQ66427.1| flagellar protein, putative [Marinomonas sp. MED121]
          Length = 242

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A+ P   I   + +NES     +V  + +RG      +   GL+ +R +  +  I   +
Sbjct: 121 KAITP---IRRKQTINESNTVIAKVDLTQVRGQIYSPNQAPYGLIAKRNININTFITKQL 177

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
              P ++ RG  + I    G + +   GIA  D ++G  I VKNI +G  V G VV  G 
Sbjct: 178 TELPIIVKRGQNILISAQSGQINVRMNGIAAEDGTLGQQIKVKNISSGRFVYGKVVSEGE 237

Query: 147 VRV 149
           +RV
Sbjct: 238 IRV 240


>gi|117619788|ref|YP_857349.1| flagella basal body P-ring formation protein FlgA [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561195|gb|ABK38143.1| flagella basal body P-ring formation protein FlgA [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 285

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           S  +  G++L+E  L +     + +RG+Y      ++G+ ++R L P   I LS +    
Sbjct: 169 STPVAKGDILSEGVLTQAYQDQTLMRGDYLSDTTALIGVRSKRELKPGQPIRLSQV---C 225

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           V+ +G +V +     +M I T   AL D S GD+I + NI +G  V G V   G+V
Sbjct: 226 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVNAVGSV 281


>gi|254785365|ref|YP_003072794.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
           turnerae T7901]
 gi|237683904|gb|ACR11168.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
           turnerae T7901]
          Length = 228

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%)

Query: 5   RFLLFFSLYVLSLDS--LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           R+ ++  + V + +   + A  IG        I AG+V+ +      ++  S++ G Y  
Sbjct: 89  RWTIYVPVQVETFEEVVIAAGAIGRGAQ----ITAGDVVTQ------RMNTSHLTGGYLR 138

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
               VVGL  RR+L P  +I L+ +  P V+ +G  V +      + + T   AL++  +
Sbjct: 139 DPARVVGLEARRMLRPGEIIKLNQVKAPDVVKKGQTVVLEARSSALRVVTEATALTNGGV 198

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G+ I V+N  +  +V   V   GTVRV
Sbjct: 199 GEQIKVRNNRSQRIVDAQVTGPGTVRV 225


>gi|83955139|ref|ZP_00963795.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
 gi|83840468|gb|EAP79641.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
          Length = 227

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGL 70
           ++ L++ +L   V    +VP  ++ A +V     L EM +      G+YA +    +VG 
Sbjct: 94  VWGLAMVTLTVPVPNRRIVPDEIVRAQDV----SLVEMPMQRV---GSYAINEYDQLVGQ 146

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
             RR+L+    +P + +  P +ISRG KV+I LT G + ++  G AL DA  G  + V N
Sbjct: 147 QVRRMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVN 206

Query: 131 IDTGVMVSGSVVDTGTVRVV 150
           + +   +S   +  G V VV
Sbjct: 207 LSSNKALSTIAMAAGVVEVV 226


>gi|52841143|ref|YP_094942.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296929|ref|YP_123298.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila str. Paris]
 gi|52628254|gb|AAU26995.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750714|emb|CAH12121.1| hypothetical protein lpp0970 [Legionella pneumophila str. Paris]
          Length = 233

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+     ++LY+    ++F SV+    V    +  G  ++ S + + ++    ++  Y  
Sbjct: 89  CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
             K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  GIA+ + ++
Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEGAL 204

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           GD + VKN+ +  ++   V    TV+V 
Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVT 232


>gi|163794153|ref|ZP_02188126.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
 gi|159180767|gb|EDP65286.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
          Length = 324

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GEV++E+ ++ ++V +     N    ++D++G   RR +     I L+ +   +VI +G 
Sbjct: 204 GEVISENDIQWLRVESRRASMNSVTRLEDLLGRTPRRPIAAGQPIRLTDVRPNFVIDKGD 263

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            V I+L  G MT++    A    ++GD+I V+N  +  M+   V   GTV +
Sbjct: 264 MVTIVLNSGTMTLTARAEATQKGAVGDIIKVRNNHSRRMLEARVTGAGTVSI 315


>gi|307823527|ref|ZP_07653756.1| flagella basal body P-ring formation protein FlgA [Methylobacter
           tundripaludum SV96]
 gi|307735512|gb|EFO06360.1| flagella basal body P-ring formation protein FlgA [Methylobacter
           tundripaludum SV96]
          Length = 232

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 19  SLFASVI----GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
           S+F SVI       VV S  I  GE++    L   +   S +R ++   ++ V      R
Sbjct: 96  SIFTSVIIKTYQMVVVLSQPIRRGEIITRQHLAIEKREVSKLREDFVIQMEQVENKQVTR 155

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L    ++ L  +  P +I RG KV I  T+ + +I   G+A+ D + G +I+VKN ++G
Sbjct: 156 QLDAGTILSLRNIAEPKLIKRGDKVVISTTKSDFSIKMNGVAMMDGTKGQLISVKNQNSG 215

Query: 135 VMVSGSVVDTGTVRV 149
            +++ +V++ G V V
Sbjct: 216 RIINATVIEPGLVSV 230


>gi|88811797|ref|ZP_01127051.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
 gi|88791188|gb|EAR22301.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
          Length = 244

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           +++ G +      ++GL TRR +    V+   +L    +I RG ++ +  T G+MT++  
Sbjct: 147 TDLSGAWYTEPSQLLGLETRRAIRAGEVLSPQLLSSARLIRRGQELVLFATSGSMTVTVK 206

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G AL D   GD++ V+N+ +  +V G VV T  V+V
Sbjct: 207 GKALEDGVEGDIVRVRNLSSNRVVEGRVVGTDKVQV 242


>gi|54293884|ref|YP_126299.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila str. Lens]
 gi|53753716|emb|CAH15174.1| hypothetical protein lpl0940 [Legionella pneumophila str. Lens]
          Length = 233

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+     ++LY+    ++F SV+    V    +  G  ++ S + + ++    ++  Y  
Sbjct: 89  CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
             K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  G+A+ + ++
Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGVAMDEGAL 204

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           GD + VKN+ +  ++   V    TV+V 
Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVT 232


>gi|114706772|ref|ZP_01439672.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
           pelagi HTCC2506]
 gi|114537720|gb|EAU40844.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
           pelagi HTCC2506]
          Length = 153

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 30  VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VP VVI  G+ +  + L  +   V +  + G +    +D+ G V RR LLP   I  + L
Sbjct: 31  VPGVVIYPGQDIVAAGLSTRTFIVKDEKV-GLFVVDREDLYGHVARRTLLPGKAIRRADL 89

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P  +  G  V +I  +  + I+  G+AL     G+ I V+N D+G+ +SG +   GT+
Sbjct: 90  TTPDAVKAGTNVTLIYAEEGLVITGLGMALESGQEGETIRVRNTDSGITISGRISPDGTI 149

Query: 148 RV 149
            V
Sbjct: 150 AV 151


>gi|126668330|ref|ZP_01739289.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
           ELB17]
 gi|126627247|gb|EAZ97885.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
           ELB17]
          Length = 263

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 26  GHAVVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           G A+V S  +  GE L    +  +  V N++ RG  A + + ++G+  RR +    +I  
Sbjct: 138 GPALVASRPLARGERLRADMVSLQTVVVNASRRGTIAEA-QSIIGMEVRRPINSGSLITP 196

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
            +L  P  + RG  V I  + G+ T+S+ G AL++A+IG+ + V+N+ +   + G V   
Sbjct: 197 DLLAAPDAVERGDHVMITASSGSFTVSSRGKALANAAIGEQVLVENLQSSRTIKGRVTAP 256

Query: 145 GTVRV 149
           G V++
Sbjct: 257 GQVQI 261


>gi|291085839|ref|ZP_06354200.2| putative flagellar protein [Citrobacter youngae ATCC 29220]
 gi|291070006|gb|EFE08115.1| putative flagellar protein [Citrobacter youngae ATCC 29220]
          Length = 260

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V+P  +I    V+    L+  +   SN R     ++ + +GL ++R L P   I  S L 
Sbjct: 136 VMPKSLIARDTVITADDLQLKKFNISNQREGLMTNMDEAIGLTSKRALQPGKPITRSELV 195

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            P ++ R   V I+     +T S  G+AL +   G+VI ++N  +  ++SG V DTG V
Sbjct: 196 LPVLVKRDQPVMIVSHMAGITASMPGVALKNGRKGEVIKIRNSSSQRIISGVVDDTGVV 254


>gi|225850284|ref|YP_002730518.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
 gi|225645553|gb|ACO03739.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
          Length = 312

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 24/124 (19%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-----------LVTRRVLLPDHVIP 83
           I  GE++ E  ++ ++ T+ N+R  +   IKD+VG           ++T R+++PD    
Sbjct: 194 IKKGEIITEEDIRFIK-TDKNVRKPFT-DIKDIVGSTAKIDISENDVITERMVIPD---- 247

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
                  Y + R   V++I ++ ++ I   G+AL +  +GD+I VKNI +G ++   V+ 
Sbjct: 248 -------YKVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKVLICKVIG 300

Query: 144 TGTV 147
             TV
Sbjct: 301 KDTV 304


>gi|23092309|gb|AAN08634.1| FlgA [Aeromonas hydrophila]
          Length = 339

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           S  +  G++L+E  L       + IRG+Y      ++G+ ++R L P   I L+ +    
Sbjct: 223 SAPVAKGDILSEGMLTLAYQDQTLIRGDYLSDPTPLIGVRSKRELKPGQPIRLTQV---C 279

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           V+ +G +V +     +M I T   AL D S GD+I + NI +G  V G V   G V
Sbjct: 280 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVSAVGAV 335


>gi|163782719|ref|ZP_02177715.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881840|gb|EDP75348.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
          Length = 211

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 48/86 (55%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S ++++  V  R +    V+  S L +  ++ RG +V +I   GN+ IS +G AL    
Sbjct: 123 ESTEELINYVALRTVKRGEVLVKSYLKKEPLVRRGQEVSVIYRSGNLEISFSGKALDTGF 182

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147
            GDVI V++ +TG ++ G V+  G+V
Sbjct: 183 YGDVIRVRSFNTGKVLRGRVISEGSV 208


>gi|117926378|ref|YP_866995.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Magnetococcus sp. MC-1]
 gi|117610134|gb|ABK45589.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Magnetococcus sp. MC-1]
          Length = 236

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
            + +Q++    R  Y   ++++VG    R +  +  +  S    P  + RG +VR++L  
Sbjct: 132 WQTIQISREGFR--YVSDVREIVGKAASRPVRANIALQASWFEEPVAVERGDRVRVLLKD 189

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTG------VMVSGSVVDTG 145
           G + I+T G+A  D  +G+ I V+N+ +       VM  G VV  G
Sbjct: 190 GALVINTVGVAGKDGRVGEAILVRNLSSNKSFLARVMAPGQVVAEG 235


>gi|315125980|ref|YP_004067983.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
           sp. SM9913]
 gi|315014494|gb|ADT67832.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
           sp. SM9913]
          Length = 253

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
            +N G+VLN+  L+   V     R      I  +VG   +R +    VI    L + Y+I
Sbjct: 136 TLNRGKVLNKQDLEYKSVDLGKHRHQGETGIDQLVGFTVKREIDKGTVISNRYLEKQYLI 195

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++   + + +T    + +   IAL D  +G+VI VKN+ +  +V G V+  G
Sbjct: 196 NKNEHISLQITTATFSANVKAIALEDGQLGEVINVKNLSSKKVVQGRVIAQG 247


>gi|319790433|ref|YP_004152066.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
           ammonificans HB-1]
 gi|317114935|gb|ADU97425.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
           ammonificans HB-1]
          Length = 321

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +V+I  G  +  + +K   V +     N  HS+K+VVG + R  +L   +I  ++L 
Sbjct: 199 VVAAVLIPKGTKITPTMVKLASVPSRKAY-NAFHSVKEVVGSIARTDILSGKIIRPTMLK 257

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
             +++ R   V+++   G + I   G+AL +   G +I VKNI TG ++   VV  G V 
Sbjct: 258 PNFLVKRNMPVKVVYNSGPIHIELLGVALDNGVKGHIIRVKNISTGKVLRCRVVGEGLVE 317


>gi|209963566|ref|YP_002296481.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
 gi|209957032|gb|ACI97668.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
          Length = 215

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 55/121 (45%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A VP+  +  GE++    L  + V    +      +  D++G   RR L+P  ++    
Sbjct: 91  EAAVPNRRLTPGEIIQPGDLASLPVRADQVSARAVVAPTDLIGKQVRRALVPGRLVQSGS 150

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P V+ R   V +    G + ++  G AL    +GDV+ V N+D+   ++G V   G 
Sbjct: 151 VGEPVVVERSKPVTLEFRSGALLLTARGRALESGGVGDVVRVINLDSNRTITGVVSGPGV 210

Query: 147 V 147
           V
Sbjct: 211 V 211


>gi|163744350|ref|ZP_02151710.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
 gi|161381168|gb|EDQ05577.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
          Length = 219

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           FA V     VP   +   +++ E  L  M++    I        ++V+G   RRVL P  
Sbjct: 89  FALVTMPVPVPVTRLLPDDIIMEDDLAIMRLPVGRIGAYVITDAEEVIGKQVRRVLTPGR 148

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            I    +  P VI+RG +V I  + G + +S+ G AL DA  G  I + N+ +   V+G 
Sbjct: 149 PIQTQSIIHPLVINRGERVDIYFSDGLLALSSPGRALDDAHEGQEIRIVNLVSNKTVTGI 208

Query: 141 VVDTGTVRV 149
               GTV +
Sbjct: 209 ATGEGTVEI 217


>gi|261856134|ref|YP_003263417.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
           neapolitanus c2]
 gi|261836603|gb|ACX96370.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
           neapolitanus c2]
          Length = 255

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 53  NSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
           N+N + N Y  S  + +G +  R +    ++    L    VI RG  V +I   GN+++S
Sbjct: 157 NANQQVNAYLTSPDEAIGQIVTRPMQAGQILTQQDLGIAKVIHRGDHVTVIAGTGNVSVS 216

Query: 112 TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           T G+A +DA +G  I VKN  +G +V G V D  TV
Sbjct: 217 TEGVAQADAGVGQRIMVKNSRSGQLVEGFVRDANTV 252


>gi|238927616|ref|ZP_04659376.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
 gi|238884541|gb|EEQ48179.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
          Length = 254

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           + G V  R +    VI   +L  P V+S G+ V ++   G +TI   G+AL    IG VI
Sbjct: 170 LAGRVAGRYIRKGMVIAPPLLAMPRVVSAGSPVELVAESGGITIRAEGVALEAGRIGYVI 229

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            V+N  +G ++ G V+D  TV+++
Sbjct: 230 RVRNASSGKLMRGRVIDEKTVQII 253


>gi|320354343|ref|YP_004195682.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
           propionicus DSM 2032]
 gi|320122845|gb|ADW18391.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
           propionicus DSM 2032]
          Length = 278

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 5/117 (4%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRG-NYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYV 92
           +N G+V+N+S +  MQ    +I G N+ ++ K+ ++G+   R +    V+  + +  P +
Sbjct: 163 LNKGDVINDSNIAVMQ---QDIGGLNHPYTSKEQLIGMQVARTVNAGTVLEQAHIAAPPI 219

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +  G  V+I   +G + +ST+G+A +D  +G++I VKNI +  ++   V   G V V
Sbjct: 220 VKDGEMVKIFARKGALQLSTSGLAKTDGRLGEIIQVKNIGSNKLIHCRVDGPGMVSV 276


>gi|330447899|ref|ZP_08311547.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492090|dbj|GAA06044.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 312

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S    VG  T R +    +I  ++L +P++I++G +V I+  +G    ST GIAL    +
Sbjct: 224 STDQTVGSYTSRRVRQGQLITENLLKKPFLINKGDEVLIVAKRGEFEASTKGIALEHGKL 283

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            + I +KN ++  ++SG +   G V  +
Sbjct: 284 NEQIKIKNKNSHKVISGIIFAQGKVETI 311


>gi|311694437|gb|ADP97310.1| flagella basal body P-ring formation protein FlgA [marine bacterium
           HP15]
          Length = 222

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVT-NSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           S+ G A+V +  +  GE + E  L +  V  NS+ RG    S K  +G+  RR +    +
Sbjct: 94  SIHGPALVAARPLTRGERITEGLLAKQSVEINSSRRGVITDS-KQAIGMEVRRAVNAGSL 152

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +   +L  P  + RG  V I    G  ++ + G AL+ AS+G+ + V+N+ +   +  SV
Sbjct: 153 VTPDMLSAPNAVERGDHVIITAKTGGFSVRSRGKALASASVGEQVLVENLRSSRTIRASV 212

Query: 142 VDTGTVRV 149
           V  G V +
Sbjct: 213 VAPGHVEI 220


>gi|297182935|gb|ADI19084.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
           proteobacterium HF0070_15B21]
          Length = 357

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 62/121 (51%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V+    I A  V+ E+ + +++     +   Y    +D++G V  R + P+ VI  + + 
Sbjct: 236 VIAKDTIKADHVIGEADILKVRRNVDRMPSKYVTDAQDILGKVASRAINPNEVIRETTVA 295

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              V+  G ++ I+    N+ ++  G++L   ++GD I V+N+ + ++V  +V D   V+
Sbjct: 296 AQPVVKSGDRLMIVFETQNLRLTAPGMSLQKGALGDRIQVRNLQSKILVYATVRDKNHVQ 355

Query: 149 V 149
           V
Sbjct: 356 V 356


>gi|119947160|ref|YP_944840.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Psychromonas ingrahamii 37]
 gi|119865764|gb|ABM05241.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Psychromonas ingrahamii 37]
          Length = 234

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 14/127 (11%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           GH++ P  ++           +E ++ N++    Y  ++  + G  T+R L    +I   
Sbjct: 122 GHSLQPEDIV----------FREQRIRNND----YYPNVAGLAGKKTKRKLRAGSIIKKK 167

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
            +   Y + R ++V II  Q + ++ST GIAL    +GD+I VKN  +G +++ +V+   
Sbjct: 168 DIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKN 227

Query: 146 TVRVVVK 152
            V V  K
Sbjct: 228 KVSVESK 234


>gi|163750576|ref|ZP_02157814.1| flagellar basal body P-ring biosynthesis protein [Shewanella
           benthica KT99]
 gi|161329731|gb|EDQ00720.1| flagellar basal body P-ring biosynthesis protein [Shewanella
           benthica KT99]
          Length = 234

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           + +F S+ V   D L+  V+  A + P  +I  G+++ +       V  + +RG    ++
Sbjct: 100 WQIFISVRV---DILYPVVVARATLGPGDLITKGDIVIKY------VEQTLLRGRQFSNL 150

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            +VVG   +R + P+  I  + L     + +G  V II    N  I T G AL D ++GD
Sbjct: 151 DEVVGTRAKRRIAPNQPIFSNNL---CFVCKGDSVSIIARTENFQIKTVGEALQDGNLGD 207

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
            I +KN  +   V+  V+D G V V
Sbjct: 208 RIRIKNTYSNKRVNARVIDVGKVEV 232


>gi|254497119|ref|ZP_05109939.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           drancourtii LLAP12]
 gi|254353657|gb|EET12372.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           drancourtii LLAP12]
          Length = 246

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 58/113 (51%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE ++   + + ++    ++  Y   I ++VG V ++ +  +       +  P V+ +G 
Sbjct: 133 GEHISGHDMYQAEIDVHKLKNGYFEDIDELVGRVCKQNIAINSPFNPHNIELPKVVRKGE 192

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           KV I+    N+T+S  GIA++D ++G+ I VKN+ +  ++   V     V VV
Sbjct: 193 KVAIVTNNNNLTVSMDGIAINDGAMGETIKVKNLVSKRIIEAQVAGKKRVTVV 245


>gi|192358836|ref|YP_001982407.1| putative flagella basal body P-ring formation protein FlgA
           [Cellvibrio japonicus Ueda107]
 gi|190685001|gb|ACE82679.1| putative flagella basal body P-ring formation protein FlgA
           [Cellvibrio japonicus Ueda107]
          Length = 256

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE ++ S ++   +  S +R +Y    K+++GL  +R +        + L  P VI RG 
Sbjct: 144 GEQISASDIQWETINISLLRQSYLLETKEIIGLEVKRNIGLGSPFLSASLDAPKVIYRGE 203

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            V +  + G + +S +G AL+D  +G  I V+N  +  +V+G+VV +G V
Sbjct: 204 TVDLESSVGGINVSASGTALADGRLGQKIRVRNNQSDRVVTGTVVASGKV 253


>gi|91204382|emb|CAJ70882.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 339

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 63  SIKDVVGLVTRRVLL---PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           +I  V  L+ +RVL    P   +  +++  P VI +G  V+I++  GN++I T G+A  D
Sbjct: 248 TIDSVEPLLGKRVLYTIPPGKPLTQNMVDDPAVIKKGELVKILVKIGNLSILTKGVAKED 307

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
              G  I V N+DT   + G V D  TV++++
Sbjct: 308 GYKGRAIKVMNLDTKKELYGEVQDDCTVKIIL 339


>gi|83312593|ref|YP_422857.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Magnetospirillum magneticum AMB-1]
 gi|82947434|dbj|BAE52298.1| Flagellar basal body P-ring biosynthesis protein [Magnetospirillum
           magneticum AMB-1]
          Length = 324

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           + VRF +  S+Y  +   + A  +G           G+V+ E  ++ + V    +R +  
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMGR----------GDVIREDDIQWVDVREEVVRRDII 225

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            + + +VG   R  L     +  + + +P V+++ + V I+L    MT++  G A+ D S
Sbjct: 226 SNARMLVGQEPRYQLRAGVPVRTNEVQKPVVVAKNSSVTIMLRSKFMTLTAQGRAIEDGS 285

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +GDVI V N+ +   V   +   G V V+
Sbjct: 286 VGDVIRVTNVQSKQTVDAKIEGPGQVSVM 314


>gi|288940403|ref|YP_003442643.1| flagella basal body P-ring formation protein FlgA [Allochromatium
           vinosum DSM 180]
 gi|288895775|gb|ADC61611.1| flagella basal body P-ring formation protein FlgA [Allochromatium
           vinosum DSM 180]
          Length = 245

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S +   Y     DVVGL +RR L+P  V+  + + +  ++ RG +V +   +  + +   
Sbjct: 148 STLTNGYFTEASDVVGLASRRRLMPGQVLTSAHVTQRRIVERGQEVTLFSARPGLVVRMK 207

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G AL +   G+ I V+N  +  +V G V  +G VRV +
Sbjct: 208 GTALENGVEGERIRVRNTSSKRIVEGYVEPSGAVRVAL 245


>gi|119503639|ref|ZP_01625722.1| flagellar protein [marine gamma proteobacterium HTCC2080]
 gi|119460701|gb|EAW41793.1| flagellar protein [marine gamma proteobacterium HTCC2080]
          Length = 234

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 10  FSLYVLSLDSLFASVIGHAVVP--SVVINAGEVL--NESRLKEMQVTNSNIRGNYAHSIK 65
           ++LYV         V  + VVP  +  +  G+++  N+  LK+ ++T  N  G     I 
Sbjct: 98  WTLYV------RGEVAANQVVPVLTAALRRGDLIGNNDIILKKRRITQEN--GGIVTEID 149

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            ++G+  RR L P + +  + L  P ++ RG  V I+     + +S  G AL+  + GD 
Sbjct: 150 GLIGMEARRNLDPGNPLRFNDLVAPILVERGQTVNIVSGGSGLRVSMQGKALAKGAAGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTV 147
           + V N+ +G  V G +   G+V
Sbjct: 210 VLVANLTSGTRVEGIIATDGSV 231


>gi|88799014|ref|ZP_01114595.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
           MED297]
 gi|88778241|gb|EAR09435.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
           MED297]
          Length = 268

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%)

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
           ++R  Y      + G   RR +    VI   ++  P +I+RG  V +I  +G +T++T G
Sbjct: 169 DLRQGYFLEAAKIEGYALRRTVKAGQVITPYMVEAPSLIARGDWVTVISGRGALTVTTTG 228

Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            AL D ++G+ I V+N+ +   V   V+  G V
Sbjct: 229 EALKDGALGEQIPVRNLSSDETVRAWVIRKGVV 261


>gi|160896083|ref|YP_001561665.1| SAF domain-containing protein [Delftia acidovorans SPH-1]
 gi|160361667|gb|ABX33280.1| SAF domain [Delftia acidovorans SPH-1]
          Length = 254

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           YA+  +D VGLV  R L     +  ++L  P + + GA+VR+++  G  +++++G A+S 
Sbjct: 166 YANQ-QDWVGLVASRPLAAGQALRQNMLRTPALFAVGAEVRVLVNGGGFSVTSSGKAMSA 224

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           A  G  + V+ +D G ++SG V   G V
Sbjct: 225 AGEGQTVRVR-MDNGRLISGVVNPEGVV 251


>gi|146281765|ref|YP_001171918.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           stutzeri A1501]
 gi|145569970|gb|ABP79076.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           stutzeri A1501]
          Length = 250

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 32  SVVINAGEVLNESRLKEMQVTN-----SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            V++    +L +SRL E  V+      SN+   Y   + +V+G    R + PD VI  + 
Sbjct: 126 QVIVANRSLLRDSRLSEADVSLAERDVSNLTQGYLTRMDEVLGNKLTRPVQPDQVIAPNQ 185

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +    V+ +G +V I    G + +   G A++D + G  I VKN  +G +V   V+  G 
Sbjct: 186 MELAEVVRKGDQVVITARSGAINVRMPGEAMADGAPGKQIPVKNQRSGRVVKARVIGPGH 245

Query: 147 VRVVV 151
           V V +
Sbjct: 246 VEVAM 250


>gi|51246534|ref|YP_066418.1| flagellar protein (FlgA) [Desulfotalea psychrophila LSv54]
 gi|50877571|emb|CAG37411.1| related to flagellar protein (FlgA) [Desulfotalea psychrophila
           LSv54]
          Length = 315

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S +   G   RR +  D VI  S L    V+ RG +V+I L  GN+ + T G+A +D  +
Sbjct: 227 SARQAEGQRLRRRIRKDDVIRASSLEHVPVVHRGDRVKIHLLSGNLQVVTLGVARADGGV 286

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            D I V+NI++  ++   VV  G V+V
Sbjct: 287 HDFIRVQNINSKKIIYCQVVAPGIVKV 313


>gi|153950687|ref|YP_001399630.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
 gi|152962182|gb|ABS49643.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
          Length = 272

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 165 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 221

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 222 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 267


>gi|209964691|ref|YP_002297606.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodospirillum centenum SW]
 gi|209958157|gb|ACI98793.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
          Length = 326

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 57/108 (52%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + +GEV+ +  +  ++V    +  +    ++++VGL  RR L  +  +    +  P V++
Sbjct: 196 LGSGEVIGDQDIAWIKVPRERVSADVVTDLENLVGLAARRTLAANQPVRGRDVRTPVVVA 255

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
           RGA V ++L    MT++  G AL+D  +G+ + + N  +  +V  +V 
Sbjct: 256 RGALVTLLLQTPAMTLTAQGKALADGGLGESVRIVNTTSNRVVDATVA 303


>gi|170022967|ref|YP_001719472.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|186896775|ref|YP_001873887.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590923|emb|CAH22579.1| Putative flagella basal body P-ring formation protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|169749501|gb|ACA67019.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|186699801|gb|ACC90430.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
          Length = 272

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 165 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 221

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 222 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 267


>gi|150260253|ref|ZP_01916981.1| lateral flagellar P-ring addition protein [Yersinia pestis
           CA88-4125]
 gi|162419782|ref|YP_001604851.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Angola]
 gi|165925092|ref|ZP_02220924.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939099|ref|ZP_02227651.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008979|ref|ZP_02229877.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211927|ref|ZP_02237962.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167418801|ref|ZP_02310554.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425137|ref|ZP_02316890.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167466345|ref|ZP_02331049.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis FV-1]
 gi|229837404|ref|ZP_04457567.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Pestoides A]
 gi|229840617|ref|ZP_04460776.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842832|ref|ZP_04462984.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229900941|ref|ZP_04516065.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Nepal516]
 gi|294502784|ref|YP_003566846.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Z176003]
 gi|149289661|gb|EDM39738.1| lateral flagellar P-ring addition protein [Yersinia pestis
           CA88-4125]
 gi|162352597|gb|ABX86545.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Angola]
 gi|165913055|gb|EDR31680.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923292|gb|EDR40443.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992318|gb|EDR44619.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206673|gb|EDR51153.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962795|gb|EDR58816.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167055900|gb|EDR65681.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229682280|gb|EEO78372.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Nepal516]
 gi|229690099|gb|EEO82156.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696983|gb|EEO87030.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705527|gb|EEO91537.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Pestoides A]
 gi|262360816|gb|ACY57537.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           D106004]
 gi|262364761|gb|ACY61318.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           D182038]
 gi|294353243|gb|ADE63584.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Z176003]
 gi|320016715|gb|ADW00287.1| Flagellar basal-body P-ring formation proteinflgA [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 282

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 175 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 231

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 232 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 277


>gi|108809059|ref|YP_652975.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Antiqua]
 gi|108810744|ref|YP_646511.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Nepal516]
 gi|167398491|ref|ZP_02304015.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|21960413|gb|AAM87006.1|AE013948_14 putative flagellar protein [Yersinia pestis KIM 10]
 gi|45437658|gb|AAS63208.1| putative flagellar protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774392|gb|ABG16911.1| flagella basal body P-ring formation protein [Yersinia pestis
           Nepal516]
 gi|108780972|gb|ABG15030.1| putative flagella basal body P-ring formation protein [Yersinia
           pestis Antiqua]
 gi|167050995|gb|EDR62403.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
          Length = 305

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 198 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 254

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 255 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 300


>gi|149374965|ref|ZP_01892738.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
           algicola DG893]
 gi|149360854|gb|EDM49305.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
           algicola DG893]
          Length = 234

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 12/133 (9%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR------VL 76
           ++ G A+V +  +  GE L ++ ++   V  ++IR     +I+ +VG+  RR      V 
Sbjct: 106 TITGDAMVAARPLGRGERLTKAAIRSDNVVVNSIRRGAITNIEQLVGMEMRRGVNTGTVF 165

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            PD V+       P  I RG  V I    GN ++++ G AL+  SIG+ + V+N+ +   
Sbjct: 166 TPDLVLA------PAAIERGDHVIISARSGNFSVNSRGKALASGSIGEQVLVENLSSSRT 219

Query: 137 VSGSVVDTGTVRV 149
           V   V   G V +
Sbjct: 220 VRARVTAPGHVEI 232


>gi|224370759|ref|YP_002604923.1| FlgA [Desulfobacterium autotrophicum HRM2]
 gi|223693476|gb|ACN16759.1| FlgA [Desulfobacterium autotrophicum HRM2]
          Length = 310

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           ++ GE+L    L   ++  S I  NY   +  +VG+  ++ L  +     +++    +I+
Sbjct: 194 LSRGEILAPKDLCLKRINVSKIPDNYLTRLDSLVGMRLKQSLASNGFFRENMVEDSPLIN 253

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           RG  V ++  +GNM I   G+A  +  +GD I V N+ T  +VSG +    TV V
Sbjct: 254 RGDNVVLVARKGNMRIVATGVADQEGRLGDQIQVNNLTTNRVVSGRISGPKTVDV 308


>gi|157376222|ref|YP_001474822.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sediminis HAW-EB3]
 gi|157318596|gb|ABV37694.1| SAF domain protein [Shewanella sediminis HAW-EB3]
          Length = 259

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           + +F S+ V   D L+  V+    + P  +I++G+V  +       V  +++RG     I
Sbjct: 125 WQIFLSVRV---DVLYPVVVSRETLGPDDLISSGDVAIQ------YVEQTSLRGQQFDKI 175

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +DVVG   +R + P+  I ++ L     + +G  V I     N  I T G AL D ++GD
Sbjct: 176 EDVVGTRVKRRIPPNQPIFINNL---CFVCKGDTVSIFARSKNFEIKTVGEALRDGNLGD 232

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
            I +KN  +   +   V   G V V
Sbjct: 233 RIRIKNSYSNKSLDAKVTGVGEVEV 257


>gi|326794324|ref|YP_004312144.1| flagella basal body P-ring formation protein FlgA [Marinomonas
           mediterranea MMB-1]
 gi|326545088|gb|ADZ90308.1| flagella basal body P-ring formation protein FlgA [Marinomonas
           mediterranea MMB-1]
          Length = 231

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           SV I+ G V+  +     +V  + IRG+   +     GLV  R +  +  I   +  +P 
Sbjct: 112 SVPISRGSVITPTNTTTGKVDITTIRGHLYTAKTPPYGLVASRNIRINTFITDKITKQPI 171

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           ++ +GA+V I    G +++   G AL D + G  I VKN  +G +V G VV    V
Sbjct: 172 LVKKGARVLITARSGRISVKMNGTALEDGAKGQQIRVKNASSGRIVYGKVVSDSEV 227


>gi|145597813|ref|YP_001161889.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Pestoides F]
 gi|145209509|gb|ABP38916.1| flagella basal body P-ring formation protein [Yersinia pestis
           Pestoides F]
          Length = 305

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 198 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 254

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 255 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 300


>gi|254491860|ref|ZP_05105039.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxidans DMS010]
 gi|224463338|gb|EEF79608.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxydans DMS010]
          Length = 232

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%)

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
            +R  Y  S   V+G   +  L     +P   L +  VI RG ++ ++ + G+M +   G
Sbjct: 136 ELRQGYIQSTDKVIGQQLKYPLSMGMALPPRGLKQEKVIRRGEQIILVASAGSMEVRMNG 195

Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
            A+ DAS+G+ + VKN  +  +V G V   G V+V +
Sbjct: 196 TAMGDASVGEKVKVKNSSSKRVVEGIVHAPGVVKVTM 232


>gi|288574698|ref|ZP_06393055.1| flagella basal body P-ring formation protein FlgA
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570439|gb|EFC91996.1| flagella basal body P-ring formation protein FlgA
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 304

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
            Y    KD+VG+   R +       + +   P +I  G  +R++   G++ +ST+G A+ 
Sbjct: 212 KYYDDPKDLVGMTVERDMAKGDPFTVRITEEPELIRTGDLIRLLYRSGSLLVSTSGRAMD 271

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             ++GD I V+N  T  +V G V   GTV V
Sbjct: 272 RGALGDRIKVRNDRTRKIVFGIVTGPGTVEV 302


>gi|304438316|ref|ZP_07398257.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
 gi|304368682|gb|EFM22366.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
          Length = 254

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           + G V  R +    VI  ++L  P V++ G+ V ++   G +TI   G+AL    IG VI
Sbjct: 170 LAGRVAGRYIRKGTVITPTLLAMPRVLTAGSPVTLVAENGGITIRAEGVALEAGRIGYVI 229

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            V+N  +G ++ G VVD  TV+++
Sbjct: 230 RVRNARSGKIMRGRVVDEKTVQII 253


>gi|161484755|ref|NP_670755.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis KIM 10]
 gi|161511337|ref|NP_994331.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis biovar Microtus str. 91001]
 gi|161760560|ref|YP_071832.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
 gi|218927908|ref|YP_002345783.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis CO92]
 gi|270487677|ref|ZP_06204751.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|115346519|emb|CAL19395.1| putative flagella basal body P-ring formation protein [Yersinia
           pestis CO92]
 gi|270336181|gb|EFA46958.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
          Length = 237

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           LK+  +T   ++G Y     +++GL + RR+     VIP S L +P +++R   V ++  
Sbjct: 130 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 186

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Q  +     GIA  +   G++I VKN+ +G +V+ +V  +G VR++
Sbjct: 187 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 232


>gi|317050616|ref|YP_004111732.1| flagella basal body P-ring formation protein FlgA
           [Desulfurispirillum indicum S5]
 gi|316945700|gb|ADU65176.1| flagella basal body P-ring formation protein FlgA
           [Desulfurispirillum indicum S5]
          Length = 249

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 23  SVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLP 78
           +VI H   A VP   I  GEVL E   +      +  R        D    +V+ R L  
Sbjct: 117 AVINHMVEAYVPVRNITRGEVLREGDFRRQLFPATQARNAMDIGETDFASHIVSTRNLQE 176

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             ++  + L R Y + RG  V +I     +T+S A +A   A +GDV+ +KN  +G +++
Sbjct: 177 GQIVRTTDLRREYAVQRGDIVEVIYRHDRLTLSMAAVATERAYLGDVVRLKNPSSGRILT 236

Query: 139 GSVVDTGTVRVV 150
             ++      ++
Sbjct: 237 ARLLQGKKAEII 248


>gi|238762363|ref|ZP_04623334.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           kristensenii ATCC 33638]
 gi|238699348|gb|EEP92094.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           kristensenii ATCC 33638]
          Length = 249

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 48  EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           E++  N S  +G Y  +  ++VGL  +R +    V+  S L +P +++RG +V +I  Q 
Sbjct: 141 ELKKKNISTAQGGYITNPDEIVGLTVKRRIRGLQVVTPSQLEQPVLVTRGQQVLMIAEQE 200

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +     G AL +   G++I VKN+ +   V+  V D   VR++
Sbjct: 201 GIEARMLGEALKNGRKGELIKVKNLSSKRTVTAIVDDIARVRML 244


>gi|170725949|ref|YP_001759975.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           woodyi ATCC 51908]
 gi|169811296|gb|ACA85880.1| flagella basal body P-ring formation protein FlgA [Shewanella
           woodyi ATCC 51908]
          Length = 235

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V   D L+  V+         +  G++L+   +    V  +N+RG     IK
Sbjct: 101 WQIFLSVRV---DILYPVVVARET-----LGPGDLLSNDDVIIEYVDRTNLRGQQFDDIK 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            VVG   +R + P+  I  S L     + +G  V I     N+ I T G AL D ++GD 
Sbjct: 153 QVVGTRVKRRIPPNQPIFSSNL---CFVCKGDTVSIYARSANVVIKTVGEALRDGNLGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
           I +KN  +   +  +V   G V V
Sbjct: 210 IRIKNTHSNKSLHATVTGVGEVEV 233


>gi|288958676|ref|YP_003449017.1| FlgA protein [Azospirillum sp. B510]
 gi|288910984|dbj|BAI72473.1| FlgA protein [Azospirillum sp. B510]
          Length = 259

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 6/119 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+   ++P  VI  G++ +   ++  Q T+     + A +   ++G+  +R +  +  +
Sbjct: 131 PVLSRRIIPGDVIGPGDI-DWQDVRADQTTS-----DTAATDAQLIGMTPKRGVSTNQPV 184

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
            L  L  P +I +GA V I LT  +MT++T G AL D   G+VI V N  +  +V  +V
Sbjct: 185 RLRDLQSPRMIDKGAMVTITLTTPSMTLTTQGKALQDGGKGEVIRVVNTQSNRIVEATV 243


>gi|157961165|ref|YP_001501199.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           pealeana ATCC 700345]
 gi|157846165|gb|ABV86664.1| SAF domain protein [Shewanella pealeana ATCC 700345]
          Length = 257

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +  G++L    ++   +  SN+RG     I  VVG   +R + P   I  + L 
Sbjct: 138 VVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEISQVVGARLKRRVAPGQPIFANQL- 196

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              ++ +G  V I     N  I T G AL D ++GD I +KN  +   +   V   G V 
Sbjct: 197 --CIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSHKKLDARVTGVGQVE 254

Query: 149 V 149
           V
Sbjct: 255 V 255


>gi|90423016|ref|YP_531386.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisB18]
 gi|90105030|gb|ABD87067.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
          Length = 370

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +++++ A+V+   V  + V+ + +V+ E R K      + I G+ A S  D VG+  RR 
Sbjct: 212 AIETVDAAVLARGVERNEVLKSSDVVVERRPK------AEIGGDAA-SRDDAVGMQARRQ 264

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L     + L  L +P ++SR   V +I     + ++  G AL   + GDV+ V N+ +  
Sbjct: 265 LRAGQALRLVDLSKPDLVSRDQAVTLIYQSTGLYLTVRGKALESGTEGDVVNVINLQSKR 324

Query: 136 MVSGSVVDTGTVRVVV 151
            V+G+V+  G V V V
Sbjct: 325 TVAGTVIGRGQVAVSV 340


>gi|89072320|ref|ZP_01158899.1| LfgA [Photobacterium sp. SKA34]
 gi|89051852|gb|EAR57304.1| LfgA [Photobacterium sp. SKA34]
          Length = 270

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 46/88 (52%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           ++  V+GL T R +    +I  ++L +P++I++G +V I+  +G    ST G+AL    +
Sbjct: 182 NVDQVIGLHTNRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGVALDHGKM 241

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            + I V+N     ++   V   G V  +
Sbjct: 242 KEQIKVENTANQKVIHARVFAQGKVETI 269


>gi|332162905|ref|YP_004299482.1| flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667135|gb|ADZ43779.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863355|emb|CBX73478.1| hypothetical protein YEW_ES20730 [Yersinia enterocolitica W22703]
          Length = 234

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 48  EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           E++  N S  +G Y     ++VG   +R +    V+  S L +P +++RG +V +I  Q 
Sbjct: 126 ELKKKNISTAQGGYITDPDEIVGFTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQD 185

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +     G AL +   G++I VKNI +   V+  V D   VR++
Sbjct: 186 GIEARMFGEALKNGRKGELIKVKNISSKRTVTAMVDDVAKVRML 229


>gi|83647408|ref|YP_435843.1| flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
 gi|83635451|gb|ABC31418.1| Flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
          Length = 236

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%)

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
           ++R  +  + +DVVG++TRR +        ++L  P +I++G  V I     + ++   G
Sbjct: 140 DLRYGFYTNAEDVVGMITRRPVNAGSAPYPNMLEAPKLINKGDMVVIEAATHHFSVKMPG 199

Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +A++D   G  I VKN  +  MV   V+ +G VR
Sbjct: 200 VAMADGRRGQQIMVKNSSSNRMVRAEVIGSGHVR 233


>gi|318604248|emb|CBY25746.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 234

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 48  EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           E++  N S  +G Y     ++VG   +R +    V+  S L +P +++RG +V +I  Q 
Sbjct: 126 ELKKKNISTAQGGYITDPDEIVGFTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQD 185

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +     G AL +   G++I VKNI +   V+  V D   VR++
Sbjct: 186 GIEARMFGEALKNGRKGELIKVKNISSKRTVTAMVDDVAKVRML 229


>gi|330972404|gb|EGH72470.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 222

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D VI    L +P +I +G +V II   G++ +   
Sbjct: 125 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 184

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  SV   G V V +
Sbjct: 185 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 222


>gi|238752870|ref|ZP_04614335.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
           ATCC 43380]
 gi|238708909|gb|EEQ01162.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
           ATCC 43380]
          Length = 215

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 48  EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           E++  N S  +G+Y  +  ++VG   +R +    ++  + L +P +++RG  V +I  Q 
Sbjct: 107 ELKKKNISAAQGSYITNPDEIVGFTVKRRIRNLQIVTSAQLEQPVLVTRGQHVVMIAEQD 166

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +     G AL +   G++I VKN+ +   +S  V D G VR++
Sbjct: 167 GIEARMLGEALKNGRKGELIKVKNLSSKRTISAIVEDIGKVRML 210


>gi|110677664|ref|YP_680671.1| flagellar basal body P-ring biosynthesis protein FlgA [Roseobacter
           denitrificans OCh 114]
 gi|109453780|gb|ABG29985.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter denitrificans OCh 114]
          Length = 140

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R  L   L  L L +LFA V    VVP+  I A   +  S +    + N N     A++
Sbjct: 2   IRLALISWLMCLPL-ALFAEV----VVPAKTIRANATITASDITLKPIQNEN-----AYT 51

Query: 64  I-KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +  DVVG   R  L     I    +  P ++SR   V +      + I T G AL    +
Sbjct: 52  LMADVVGQEARTTLYAGRPILFDDIGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGV 111

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           GD + + N+D+   + G V   G+VRV
Sbjct: 112 GDRVRIMNLDSRATLFGQVQADGSVRV 138


>gi|114777906|ref|ZP_01452820.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
 gi|114551693|gb|EAU54245.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
          Length = 234

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%)

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           G +  +   +VG+ T R L    VI  S + +P ++ RG  V I+L  G + I   G A+
Sbjct: 136 GAWWQNSSTLVGMRTTRPLAAGDVILSSYVKQPPLVKRGDLVSILLDVGGLHIRAEGKAM 195

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             A  G+ I V+N+ +  M+   V  TG VRV
Sbjct: 196 RSAGKGESIPVRNMRSHEMIQAVVEQTGLVRV 227


>gi|66046716|ref|YP_236557.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257423|gb|AAY38519.1| Flageller protein FlgA [Pseudomonas syringae pv. syringae B728a]
          Length = 252

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D VI    L +P +I +G +V II   G++ +   
Sbjct: 155 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 214

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  SV   G V V +
Sbjct: 215 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 252


>gi|260365768|ref|ZP_05778264.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus K5030]
 gi|260880690|ref|ZP_05893045.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897704|ref|ZP_05906200.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308086270|gb|EFO35965.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308092470|gb|EFO42165.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308115034|gb|EFO52574.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus K5030]
          Length = 265

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +   EV+  + LK ++    +   ++  + K  +GL T R L    V+  + L 
Sbjct: 144 VVAATTVGRSEVVTANHLK-LETRTISRSDDFYTAPKHAIGLETTRRLRAGQVVDPTSLS 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 203 APALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 251


>gi|28900118|ref|NP_799773.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|28808401|dbj|BAC61606.1| LfgA [Vibrio parahaemolyticus RIMD 2210633]
          Length = 235

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +   EV+  + LK ++    +   ++  + K  +GL T R L    V+  + L 
Sbjct: 114 VVAATTVGRSEVVTANHLK-LETRTISRSDDFYTAPKHAIGLETTRRLRAGQVVDPTSLS 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G
Sbjct: 173 APALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 218


>gi|152990360|ref|YP_001356082.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
 gi|151422221|dbj|BAF69725.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
          Length = 238

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
           NY   +++++G V R  +  +  I   ++   Y + +   VRII  +G + I   G+AL 
Sbjct: 147 NYP-DLQEIIGSVARVNIYKNRKITRYMIEPNYAVKKRQNVRIIYAKGPIRIELLGLALQ 205

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +   GD+I VKNI T  ++   V+  G V+
Sbjct: 206 NGKRGDIIKVKNISTNKVLECKVLSDGVVQ 235


>gi|289679038|ref|ZP_06499928.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae FF5]
 gi|302185595|ref|ZP_07262268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae 642]
 gi|330899392|gb|EGH30811.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330943194|gb|EGH45603.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. pisi str. 1704B]
 gi|330953710|gb|EGH53970.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae Cit 7]
          Length = 222

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D VI    L +P ++ +G +V II   G++ +   
Sbjct: 125 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMVHKGDQVVIIARSGSLAVRMP 184

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  SV   G V V +
Sbjct: 185 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 222


>gi|270262405|ref|ZP_06190676.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
 gi|270043089|gb|EFA16182.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
          Length = 217

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            VIG+ +V +  I+AG  L  + +K        +      +    +G V+ R + P   +
Sbjct: 90  QVIGNYLVSARNISAGSRLTAADVKLKSGRLDTLAPRTLTNADKAIGAVSLRNISPGQPL 149

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G  V++        IS AG A+++A+  D + V+ + +G +VSG   
Sbjct: 150 TFAMLRRAWVIKAGQPVQVTAQGTGFNISGAGKAMNNAAAEDSVRVR-MASGQIVSGIAD 208

Query: 143 DTGTVRVVV 151
           D GT+R+ +
Sbjct: 209 DDGTIRIAL 217


>gi|1272364|gb|AAA97472.1| LfgA [Vibrio parahaemolyticus]
          Length = 235

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +   EV+  ++LK ++    +   ++    K  +GL T R L    V+  + L 
Sbjct: 114 VVAATTVGRSEVVTANQLK-LETRTISRSDDFYTDPKHAIGLETTRRLRAGQVVDPTNLS 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G
Sbjct: 173 APALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 218


>gi|167623355|ref|YP_001673649.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           halifaxensis HAW-EB4]
 gi|167353377|gb|ABZ75990.1| SAF domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 257

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +  G++L+   ++   +  + +RG+    I +VVG   +R + P   I  + L 
Sbjct: 138 VVAKSTMGPGDLLSRGDIELEYIEQTTLRGHQFEEISEVVGARLKRRVAPGQPIFANQL- 196

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              ++ +G  V I     N  I T G AL DA++GD + +KN  +   +   V   G V 
Sbjct: 197 --CIVCKGDSVSIYARSENFEIKTVGEALHDANVGDKVRIKNSHSHKNLDARVTGVGQVE 254

Query: 149 V 149
           V
Sbjct: 255 V 255


>gi|241763673|ref|ZP_04761723.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           delafieldii 2AN]
 gi|241367148|gb|EER61514.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           delafieldii 2AN]
          Length = 200

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)

Query: 19  SLFASVIGHAVVPSVVIN----AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
           S+F  V   A  P+ V+N    +G  L  +   E +V  +        +    VG V  R
Sbjct: 65  SVFLPVTIKAFGPAWVLNNNVASGVALTAADATEAEVDWAAEAAPVLANPDQWVGQVASR 124

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L+    +  S++  P V   GA+VR++       ++++G ALS+ + G  I ++ +D G
Sbjct: 125 QLMAGQAVRQSMVRAPAVFRAGAQVRVVTQGPGYMVTSSGQALSNGATGQTIRIR-MDNG 183

Query: 135 VMVSGSVVDTGTVRVVV 151
             +SG V + GTV V +
Sbjct: 184 RTISGIVNEDGTVAVTL 200


>gi|225849136|ref|YP_002729300.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643496|gb|ACN98546.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 167

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 31/58 (53%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           VI +  KV I+   G + I   G+AL     GD I VKNI TG  + G VVD  TV V
Sbjct: 107 VIQKNQKVNILYINGPIKIQLLGVALESGKEGDYIKVKNISTGKEIVGKVVDNQTVLV 164


>gi|170682474|ref|YP_001742369.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
           SMS-3-5]
 gi|170520192|gb|ACB18370.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
           SMS-3-5]
          Length = 245

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R +    + D +GL ++  L P   I    L  P ++ R   V I
Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMI 193

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N+ +  ++S  V ++G V  V
Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNVSSQRVISARVAESGVVTTV 242


>gi|260431747|ref|ZP_05785718.1| flagella basal body P-ring formation protein FlgA [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415575|gb|EEX08834.1| flagella basal body P-ring formation protein FlgA [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 138

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VV 68
           L V  L  LFA    + VVP+  I A EV+    LK          G+ A +++D   +V
Sbjct: 6   LMVCLLCPLFAQ--ANVVVPTRTIRAKEVITAEDLKIQP-------GDVAGAVEDPDLLV 56

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G   R  L P   I  S +  P V+ R   V ++  +  +TI   G AL   ++G+ I  
Sbjct: 57  GQEARIALYPGRPIRASDVRAPAVVDRNDLVTLVFVKNGLTIEVEGRALGRGAVGERIRA 116

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
            N+ +   V+G V   G + V
Sbjct: 117 MNLSSRSAVTGKVGPDGQIEV 137


>gi|90577340|ref|ZP_01233151.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
 gi|90440426|gb|EAS65606.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
          Length = 247

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 45/86 (52%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + V+GL   R +    +I  ++L +P++I++G +V I+  +G    ST GIAL    + +
Sbjct: 161 EQVIGLHAIRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGIALEHGKMHE 220

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVV 150
            I V+N  T  ++   V   G V  V
Sbjct: 221 QIRVENTATQKVIHARVFAQGKVETV 246


>gi|163733144|ref|ZP_02140588.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter litoralis Och 149]
 gi|161393679|gb|EDQ18004.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter litoralis Och 149]
          Length = 140

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +RF L  S  V S   +FA V    VVP+  I A   ++ S +    + N N     A+S
Sbjct: 2   IRFALI-SWLVCSPFFVFAEV----VVPAKTIRANATISASDITLKPIKNEN-----AYS 51

Query: 64  I-KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +  DVVG   R  L     I    +  P ++SR   V +      + I T G AL    +
Sbjct: 52  LMADVVGQEARTTLYAGRPILFDDVGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGV 111

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           GD + + N+D+   + G V   G++RV
Sbjct: 112 GDRVRIMNLDSRATLFGQVQADGSIRV 138


>gi|258625238|ref|ZP_05720150.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
 gi|258582485|gb|EEW07322.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
          Length = 265

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +   E + ES LK  + T +     Y ++ + V+GL T R +    ++  ++L 
Sbjct: 144 VVAKTTLRRDETIQESNLKIEKRTLTRQEDFYTNT-QQVIGLETTRRIRSGQIVNPNILR 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              ++ +G +V II ++   T +T GIAL     G  I V+N  +G ++   V D   V
Sbjct: 203 SSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVIRAVVTDLNQV 261


>gi|206889894|ref|YP_002249847.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741832|gb|ACI20889.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 231

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+    +  + +  GEV+ E ++ E++   S +          ++G V +R L    +I
Sbjct: 103 EVLTRVYITQIPLKRGEVITEEKIMEIKQPLSRLPVGAITDKNLLIGKVVKRSLTRGLII 162

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               L+    + +G+KV +I+  G + I T G+  SDA +G    V+   TG  + G +V
Sbjct: 163 KEDYLYSGMPVKKGSKVDVIINTGQVMIMTEGVLKSDAVVGGNARVQCFQTGKEIVGKLV 222

Query: 143 DTGTVRV 149
               VRV
Sbjct: 223 GKDKVRV 229


>gi|297183132|gb|ADI19275.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
           proteobacterium HF0200_39L23]
          Length = 227

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 49/90 (54%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y    +D++G +  R + P+ VI  + +    VI  G ++ I+    N+ ++  GI+L  
Sbjct: 137 YVTDEEDILGKIASRAINPNEVIQETNVSAVPVIKSGDRLMIVFETQNLRLTAPGISLQK 196

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            ++GD I V+N+ + ++V  ++ D   V+V
Sbjct: 197 GALGDRIRVRNLQSKILVYATIEDRNHVQV 226


>gi|118588712|ref|ZP_01546120.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
 gi|118438698|gb|EAV45331.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
          Length = 331

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 55/115 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G+++ E  L  ++   + +       ++D+VG   R  L  +  +  + + RP +I 
Sbjct: 202 VRRGDIVREEDLNIIREARTKVPAGALTEVEDIVGKQARTTLRANAPLSRNDVQRPILIE 261

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           RG K+ +      M +++   A+   + GDVI V N+ +  +V  ++   G VRV
Sbjct: 262 RGEKITVTYVMPGMKLTSRAQAMDSGAKGDVIDVMNLQSRRIVPATITSRGQVRV 316


>gi|330875965|gb|EGH10114.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 248

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D VI    L +P +I +G +V II   
Sbjct: 145 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARS 202

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 203 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 248


>gi|237799198|ref|ZP_04587659.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806217|ref|ZP_04592921.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331022053|gb|EGI02110.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027330|gb|EGI07385.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   G + +   
Sbjct: 155 SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARTGTLAVRMP 214

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  SV   G V V +
Sbjct: 215 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 252


>gi|28869130|ref|NP_791749.1| flagellar protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967591|ref|ZP_03395739.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
 gi|301385704|ref|ZP_07234122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato Max13]
 gi|302062727|ref|ZP_07254268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato K40]
 gi|302134843|ref|ZP_07260833.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852370|gb|AAO55444.1| flagellar protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927892|gb|EEB61439.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
 gi|331019680|gb|EGH99736.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 248

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D VI    L +P +I +G +V II   G++ +   
Sbjct: 151 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 210

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 211 GEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 248


>gi|300113144|ref|YP_003759719.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           watsonii C-113]
 gi|299539081|gb|ADJ27398.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           watsonii C-113]
          Length = 235

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S+  +V G  +V +  I++G  LN + ++  +   S +R  Y +     VG   +R +  
Sbjct: 103 SVKMAVYGKVLVATHSISSGFPLNLADMRLERRDLSELRQGYLNEPAQAVGKRLKRPVGL 162

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             +I   +L  P +I RG +V ++     + ++  G AL DA  G+ I V+N  +  +V 
Sbjct: 163 GAIITPGMLETPKLIRRGQQVILMAKVPGLRVNMKGQALEDAGAGEHIRVRNTSSQRIVE 222

Query: 139 GSVVDTGTVRV 149
           G+V   G V+V
Sbjct: 223 GTVTAAGLVQV 233


>gi|149912835|ref|ZP_01901369.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. AzwK-3b]
 gi|149813241|gb|EDM73067.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. AzwK-3b]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           A+ +  V+G   R  L     I L+ +  P V+ R   V +I     + I+T G AL  A
Sbjct: 49  ANRLDQVIGQEARVALYAGRPIRLTDIGEPAVVDRNQMVSLIFESHGLRIATEGRALDRA 108

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +G++I V N+ +   VSG V+  G +RV+
Sbjct: 109 GVGEMIRVMNMSSRATVSGEVLPDGRIRVM 138


>gi|71735190|ref|YP_275572.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71555743|gb|AAZ34954.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 149 LRERDV--SSLGQGFLASLDQAVGQTVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 206

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 207 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 252


>gi|121997325|ref|YP_001002112.1| SAF domain-containing protein [Halorhodospira halophila SL1]
 gi|121588730|gb|ABM61310.1| SAF domain [Halorhodospira halophila SL1]
          Length = 262

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 56  IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN---MTIST 112
           IRG +      ++G   RR L     I  + +  P ++ R    R+ +T GN   + IS+
Sbjct: 166 IRGEFYRDPAPLIGQAVRRSLREGAAITGNHVQPPRLVER--NDRVTITAGNGGAIQISS 223

Query: 113 AGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            G AL     G+ I V+N+D+G  +   VV  G VRV
Sbjct: 224 RGRALEHGQEGERIRVENLDSGREIQARVVGEGQVRV 260


>gi|148976388|ref|ZP_01813094.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
           bacterium SWAT-3]
 gi|145964211|gb|EDK29467.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
           bacterium SWAT-3]
          Length = 234

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE++ +  +    ++ +  R     + + V+G   ++ L P  V+    +    V+ R  
Sbjct: 124 GEIIGQYDVTTAMISLNKFRRQGFTAPEQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           KV I   +G MTI+T G AL+D S+GD + VKN  +  ++ G V +   V V
Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTNMSEVTV 232


>gi|77166141|ref|YP_344666.1| flageller protein FlgA [Nitrosococcus oceani ATCC 19707]
 gi|254435735|ref|ZP_05049242.1| SAF domain family [Nitrosococcus oceani AFC27]
 gi|76884455|gb|ABA59136.1| flagellar protein FlgA [Nitrosococcus oceani ATCC 19707]
 gi|207088846|gb|EDZ66118.1| SAF domain family [Nitrosococcus oceani AFC27]
          Length = 235

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S+  +V G  +V +  I++G  L+   L+  +   S +R  Y +     VG   +R +  
Sbjct: 103 SVKMAVYGKVLVATHSISSGFPLSLVDLRLERRDLSELRQGYLNEPAQAVGKRLKRPVGL 162

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             +I   +L  P +I RG +V ++ T   + ++  G AL DA  G+ I V+N  +  +V 
Sbjct: 163 GAIITPGMLEIPKLIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVRNTSSRRIVE 222

Query: 139 GSVVDTGTVRV 149
           G+V   G V+V
Sbjct: 223 GTVTAAGLVQV 233


>gi|212634342|ref|YP_002310867.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           piezotolerans WP3]
 gi|212555826|gb|ACJ28280.1| Flagellar basal-body P-ring formation protein FlgA [Shewanella
           piezotolerans WP3]
          Length = 237

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +  G++L+ S ++   V  + +RG     +  VVG   +R + P   I  + L 
Sbjct: 118 VVAKSTLGPGDLLSSSDVEIDYVEQTTLRGQQFDQVDQVVGARLKRRVAPQQPIFNNHL- 176

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              ++ +G  V I     N  I T G AL D ++GD I +KN  +   ++  V   G V 
Sbjct: 177 --CIVCKGDTVSIFARSENFEIKTVGEALHDGNLGDKIRIKNTHSQKTLNAKVTAVGQVE 234

Query: 149 V 149
           V
Sbjct: 235 V 235


>gi|320325083|gb|EFW81152.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329342|gb|EFW85335.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330880507|gb|EGH14656.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 222

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222


>gi|253702431|ref|YP_003023620.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M21]
 gi|251777281|gb|ACT19862.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M21]
          Length = 246

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GEVL+ S L   +   S  RG Y     D VGL  +  L  +  +    L 
Sbjct: 124 VVAARTLERGEVLSASDLAVAKRDLSLARGGYLKEPDDAVGLRVKTTLRANTPVRKDNLE 183

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +  V+  G  V I+     + ++ +G A    + GDVI V+N+ +   ++  VVD  TV+
Sbjct: 184 KVPVVKSGQMVTILAENDVVRVTASGRAKGAGAPGDVITVQNLSSQKDIAARVVDAATVK 243

Query: 149 V 149
           V
Sbjct: 244 V 244


>gi|289627754|ref|ZP_06460708.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647434|ref|ZP_06478777.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330866413|gb|EGH01122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 222

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222


>gi|260574400|ref|ZP_05842404.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
           SW2]
 gi|259023296|gb|EEW26588.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
           SW2]
          Length = 139

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 15/148 (10%)

Query: 4   VRFLLFFSLY--VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           +RFL    L+  +   DSL A+           I A  VL E+   +M +  ++I G   
Sbjct: 1   MRFLALILLFPTLAQADSLVATR---------TIRAQTVLAET---DMTLVAADIPGALT 48

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            +    +GL  R  L     I    L  P ++ R   V +    G +TI T G A++   
Sbjct: 49  DT-GAALGLEARTTLYAGRPIRPGDLGAPAIVERNQVVSLAYHAGPLTILTEGRAMARGG 107

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +GDVIAV N+D+   VSG +   G V+V
Sbjct: 108 VGDVIAVMNLDSRTTVSGRIDAEGMVQV 135


>gi|258404728|ref|YP_003197470.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
           retbaense DSM 5692]
 gi|257796955|gb|ACV67892.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
           retbaense DSM 5692]
          Length = 326

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            V+  SVL  P ++ RG  V +   +G + I+ +G+A  D  + + I V+N  TG  + G
Sbjct: 255 EVLDRSVLAAPILVQRGKPVTLEAVRGALVITASGVAQEDGGLQETIRVENRRTGKEIFG 314

Query: 140 SVVDTGTVRV 149
           +VV   TVRV
Sbjct: 315 TVVSADTVRV 324


>gi|254227979|ref|ZP_04921409.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|262396039|ref|YP_003287892.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
 gi|151939475|gb|EDN58303.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|262339633|gb|ACY53427.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
          Length = 265

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
             +GL T R L    V+  S L  P +I +G +V +I ++   + ST G+AL D + G  
Sbjct: 180 QAIGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQ 239

Query: 126 IAVKNIDTGVMV 137
           I V+N+ +G ++
Sbjct: 240 IEVENLSSGKVI 251


>gi|298487866|ref|ZP_07005906.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157591|gb|EFH98671.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 252

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 149 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 206

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 207 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 252


>gi|330892071|gb|EGH24732.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. mori str. 301020]
 gi|330986458|gb|EGH84561.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 222

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222


>gi|269960112|ref|ZP_06174488.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
 gi|269835083|gb|EEZ89166.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
          Length = 265

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I+  + L+ S LK    T S  + ++       +GL T R +    +I  + L 
Sbjct: 144 LVATSTIDRNDTLSASNLKSETRTISR-QDDFYTKANQAIGLETTRRIRAGQIIDPTNLS 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            P +I +G +V II ++G  + ST G+AL     G  I V+N  +G ++
Sbjct: 203 SPPLIEKGNEVIIIASKGGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251


>gi|153837099|ref|ZP_01989766.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ3810]
 gi|149749687|gb|EDM60432.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ3810]
          Length = 179

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++ +SV    VV +  +   EV+  + LK ++    +   ++    K  +GL T R L  
Sbjct: 48  TIKSSVTLPVVVATTTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 106

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
             V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G
Sbjct: 107 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 162


>gi|257484959|ref|ZP_05639000.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331011033|gb|EGH91089.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 222

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  V  S++   +  S+   VG    R ++ D V+    L +P +I +G +V II   
Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVIIIARS 176

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G++ +   G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222


>gi|328470097|gb|EGF41008.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 10329]
          Length = 181

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++ +SV    VV +  +   EV+  + LK ++    +   ++    K  +GL T R L  
Sbjct: 50  TIKSSVTLPVVVAATTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 108

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
             V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G
Sbjct: 109 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164


>gi|283784081|ref|YP_003363946.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
           ICC168]
 gi|282947535|emb|CBG87087.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
           ICC168]
          Length = 256

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
           VI A +VL    LK   V  S  R      + + +G+ ++R L P   +  + L  P ++
Sbjct: 142 VITADDVL----LKRYNV--SGQRSGLLMDLNEAIGMTSKRPLQPGKPLNRAQLVAPVLV 195

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            R   V I+   G +T +  G+AL +   G+VI ++N  +  ++SG V D G V
Sbjct: 196 KRDQPVMIVSRLGGITAAMPGVALKNGRKGEVIKIRNAASQRIISGVVDDAGVV 249


>gi|146277660|ref|YP_001167819.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145555901|gb|ABP70514.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 225

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 6/74 (8%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           V L   + +LP H+ P       ++++RG  V + +  G + + TAG AL+DA++GD++ 
Sbjct: 145 VALAPGQPILPRHLEPD------WLVTRGGPVALRVAVGPIEVLTAGEALADAALGDLVE 198

Query: 128 VKNIDTGVMVSGSV 141
           V+N+ +G ++  +V
Sbjct: 199 VRNLSSGAILRATV 212


>gi|308126103|ref|ZP_05907780.2| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|308109249|gb|EFO46789.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ4037]
          Length = 181

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++ +SV    VV +  +   EV+  + LK ++    +   ++    K  +GL T R L  
Sbjct: 50  TIKSSVTLPVVVAATTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 108

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
             V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G
Sbjct: 109 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164


>gi|300817274|ref|ZP_07097492.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
 gi|300530250|gb|EFK51312.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
          Length = 245

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R +    + D +GL ++  L P   I    L  P ++ R   V I
Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMI 193

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N  +  ++S  V ++G V  V
Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQWVISAMVAESGVVTTV 242


>gi|242238965|ref|YP_002987146.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech703]
 gi|242131022|gb|ACS85324.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech703]
          Length = 234

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G VT R+L     I   +L   + I  G  V+++++    +I++ G AL +A++ D 
Sbjct: 150 EAIGNVTTRMLGAGQAISAKMLRSAWAIKMGEPVQVVVSGTGFSINSEGKALENAAVNDK 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+ +D+G ++SG   + G VR++
Sbjct: 210 VRVR-MDSGQIISGIAAEKGLVRII 233


>gi|218708798|ref|YP_002416419.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           splendidus LGP32]
 gi|218321817|emb|CAV17785.1| Flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           splendidus LGP32]
          Length = 248

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE++ +  +    ++ +  R     + + V+G   ++ L P  V+    +    V+ R  
Sbjct: 138 GEIVGQYDVTTAMISLNKFRRQGFTTPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 194

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           KV I   +G MTI+T G AL+D S+GD + VKN  +  ++ G V     V V
Sbjct: 195 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 246


>gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria
           pomeroyi DSS-3]
 gi|56676836|gb|AAV93502.1| flagellar basal-body P-ring formation protein FlgA [Ruegeria
           pomeroyi DSS-3]
          Length = 138

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 4/130 (3%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           L  +     +VP+  I A E++     +++ + ++ + G++     +V+G   R  L   
Sbjct: 12  LAQTAAAEVLVPTRTIRAKEIIGA---EDLMLKSAEVPGSFTDP-AEVIGQEARVALYAG 67

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  + +  P ++ R   V +    G + I+T G AL   + GDVI V N+ +   VSG
Sbjct: 68  RPIRYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSG 127

Query: 140 SVVDTGTVRV 149
            +   G++ V
Sbjct: 128 QIRPNGSIEV 137


>gi|254464729|ref|ZP_05078140.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium Y4I]
 gi|206685637|gb|EDZ46119.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium Y4I]
          Length = 140

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR------RVLLPDHVI 82
           ++P   I A E++N    +++ + N  I G  +    DV G+  R      R L P  + 
Sbjct: 23  LIPLRTIRAKEIVNP---EDLALKNGEILGALSDP-ADVTGMEARVSLYAGRPLRPGDIG 78

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
           P      P +I R   V +I  QG +TI+  G AL   + G+ + V N+ +   V+G + 
Sbjct: 79  P------PAIIERNDLVTLIFRQGVLTIAAEGRALGRGAAGEAVRVMNLSSRTTVTGRIK 132

Query: 143 DTGTVRV 149
           + G+V V
Sbjct: 133 EDGSVEV 139


>gi|330961187|gb|EGH61447.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 192

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++   +  S+   VG    R ++ D VI    L +P +I +G +V II   G + +   
Sbjct: 95  SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARTGTLAVRMP 154

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G A+SD    + I VKN+++  ++  +V   G V V +
Sbjct: 155 GEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 192


>gi|84514783|ref|ZP_01002146.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
           vestfoldensis SKA53]
 gi|84510942|gb|EAQ07396.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
           vestfoldensis SKA53]
          Length = 237

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLH--RPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           +I+DVVG V  + L P   +P+S  H  R + I+    V + +  G + I + GIAL   
Sbjct: 145 TIEDVVGRVLSQSLTPR--VPVSPRHLQRDWAINADDIVTLQIVNGGIEIESPGIALEPG 202

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
            IGD I ++N+ +G  V G +     V+V+ K
Sbjct: 203 QIGDNIRLRNLSSGSEVIGRISQERKVQVISK 234


>gi|86146161|ref|ZP_01064487.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
           MED222]
 gi|85836108|gb|EAQ54240.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
           MED222]
          Length = 234

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE++ +  +    ++ +  R     + + V+G   ++ L P  V+    +    V+ R  
Sbjct: 124 GEIVGQYDVTTAMISLNKFRRQGFTTPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           KV I   +G MTI+T G AL+D S+GD + VKN  +  ++ G V     V V
Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 232


>gi|27363711|ref|NP_759239.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus CMCP6]
 gi|27359827|gb|AAO08766.1| Flagellar basal-body P-ring formation protein flgA [Vibrio
           vulnificus CMCP6]
          Length = 248

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           ++ GE+++ S +    +     R      I  VVG   +RVL P  V+    +    V+ 
Sbjct: 135 LSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVGAKVKRVLRPGDVVERGDI---CVVC 191

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           R  KV I  T+  MTI+T G +L D + G+ + VKN  +  ++ G V  TG   V V
Sbjct: 192 RNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVKNDKSQRIIEGIV--TGIAEVTV 246


>gi|37679141|ref|NP_933750.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus YJ016]
 gi|320157115|ref|YP_004189494.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           vulnificus MO6-24/O]
 gi|37197883|dbj|BAC93721.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus YJ016]
 gi|319932427|gb|ADV87291.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           vulnificus MO6-24/O]
          Length = 248

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           ++ GE+++ S +    +     R      I  VVG   +RVL P  V+    +    V+ 
Sbjct: 135 LSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVGAKVKRVLRPGDVVERGDI---CVVC 191

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           R  KV I  T+  MTI+T G +L D + G+ + VKN  +  ++ G V  TG   V V
Sbjct: 192 RNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVKNDKSQRIIEGIV--TGIAEVTV 246


>gi|84388085|ref|ZP_00990981.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
           12B01]
 gi|84377152|gb|EAP94022.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
           12B01]
          Length = 234

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GE++ +  +    ++ +  R     + + V+G   ++ L P  V+    +    V+ R  
Sbjct: 124 GEIVGQYDVTTAMISLNKFRRQGFTAPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           KV I   +G MTI+T G AL+D S+GD + VKN  +  ++ G V     V V
Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 232


>gi|288962679|ref|YP_003452973.1| FlgA protein [Azospirillum sp. B510]
 gi|288914945|dbj|BAI76429.1| FlgA protein [Azospirillum sp. B510]
          Length = 246

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP   I  GEV+  + L  +++        +  S + +VG   RR +    ++ +  +  
Sbjct: 116 VPVRRIRPGEVIEAADLTTIRLPLERAGAGFITSAEALVGQSPRRQISAGRMVQVGSVGA 175

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P V+ R   V ++   G + ++  G AL +  +GD + V NI +  +V+G+V    TV V
Sbjct: 176 PIVVQRNRPVTLVYEDGALMLAARGRALQEGGVGDTVRVMNIASSTIVTGTVTGAETVSV 235


>gi|148980287|ref|ZP_01815974.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
 gi|145961306|gb|EDK26616.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
          Length = 235

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 45/84 (53%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           ++ G   +R +    ++  S ++  Y + +G  V ++    ++ + T G+AL    IGD 
Sbjct: 151 EIAGSKIKRSVNKGDLLTTSSMYLDYAVEKGHAVDVVFQSKSIRLETLGMALESGLIGDT 210

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
           ++VKN  +G ++ G V++   VR+
Sbjct: 211 VSVKNQQSGKLLRGVVIEKNRVRI 234


>gi|23015789|ref|ZP_00055556.1| COG1261: Flagellar basal body P-ring biosynthesis protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 324

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           + VRF +  S+Y  +   + A  +G           GEV+ E+ ++ ++V    +R +  
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMGR----------GEVIAEADIQWVEVREEVVRRDIV 225

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            + + ++G   R  L     +  + + +P  + + + V I+L    MT++  G A+ D S
Sbjct: 226 SNPRMLIGQEPRYQLRAGVPVRTNEVQKPLAVGKNSSVTIVLRSKFMTLTAQGRAMEDGS 285

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +GDVI V N+ +   V   +   G V V+
Sbjct: 286 VGDVIRVTNVQSKQTVDARIEGPGQVSVM 314


>gi|256020224|ref|ZP_05434089.1| flagella basal body P-ring formation protein FlgA [Shigella sp. D9]
 gi|260853462|ref|YP_003227353.1| putative lateral flagellar P-ring addition protein [Escherichia
           coli O26:H11 str. 11368]
 gi|260866409|ref|YP_003232811.1| putative lateral flagellar P-ring addition protein [Escherichia
           coli O111:H- str. 11128]
 gi|307313523|ref|ZP_07593144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|331666542|ref|ZP_08367416.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
 gi|332281386|ref|ZP_08393799.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
 gi|257752111|dbj|BAI23613.1| predicted lateral flagellar P-ring addition protein [Escherichia
           coli O26:H11 str. 11368]
 gi|257762765|dbj|BAI34260.1| predicted lateral flagellar P-ring addition protein [Escherichia
           coli O111:H- str. 11128]
 gi|306906691|gb|EFN37202.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|315059538|gb|ADT73865.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli W]
 gi|323158107|gb|EFZ44206.1| lateral flagellar P-ring addition protein [Escherichia coli
           EPECa14]
 gi|323178498|gb|EFZ64076.1| lateral flagellar P-ring addition protein [Escherichia coli 1180]
 gi|323379903|gb|ADX52171.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           KO11]
 gi|331065766|gb|EGI37650.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
 gi|332103738|gb|EGJ07084.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R +    + D +GL ++  L P   I    L  P ++ R   V I
Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMI 193

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N  +  ++S  V ++G V  V
Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|269965640|ref|ZP_06179753.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
 gi|269829708|gb|EEZ83944.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
          Length = 265

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +  VGL T R L    V+  S L  P +I +G +V +I ++   + ST G+AL D + G 
Sbjct: 179 EQAVGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQ 238

Query: 125 VIAVKNIDTGVMV 137
            I V+N  +G ++
Sbjct: 239 QIDVENPSSGKVI 251


>gi|312884838|ref|ZP_07744530.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367490|gb|EFP95050.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 265

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y H + DV+   T R +   H+I    L+ P ++  G +V I  ++   + +T GIAL  
Sbjct: 175 YTH-VSDVLEKTTTRRIRSGHIITPKTLNAPAMVEVGNQVIISASKDRFSATTKGIALEK 233

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            + G+ I V+N+ +G  +  +V+    V+ 
Sbjct: 234 GNKGEQITVQNVSSGKTIQATVIGHNKVQT 263


>gi|260886212|ref|ZP_05897475.1| putative flagella basal body P-ring formation protein FlgA
           [Selenomonas sputigena ATCC 35185]
 gi|330839792|ref|YP_004414372.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           sputigena ATCC 35185]
 gi|260863931|gb|EEX78431.1| putative flagella basal body P-ring formation protein FlgA
           [Selenomonas sputigena ATCC 35185]
 gi|329747556|gb|AEC00913.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           sputigena ATCC 35185]
          Length = 244

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 39  EVLNES--RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
           + L+E+  R +E +VT   +RG       +V+G V  R++    V+   +L +P V+  G
Sbjct: 132 QALSEADMRFEEREVTR--VRGRCLKDKGEVLGHVVSRMVQEGAVLSEDLLRQPVVMESG 189

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           A V I+     + +  +G+AL+   +G  I V+N  +  ++   V+D  TV +
Sbjct: 190 AAVTIVSRYNGIEVRVSGVALTRGRVGQKIRVRNAASRKVMLARVLDASTVEI 242


>gi|312962594|ref|ZP_07777084.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
           fluorescens WH6]
 gi|311283174|gb|EFQ61765.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
           fluorescens WH6]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S I   Y  S+   +G    R ++ D VI L  L +  VI +G +V I  + G + +   
Sbjct: 157 SQINQGYLTSLDQALGQKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGTLNVKMP 216

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G ALS+  + + I VKN+++  ++   V   G V V +
Sbjct: 217 GEALSNGGMSEQIRVKNLNSNRVIKARVTAPGQVEVAL 254


>gi|89902473|ref|YP_524944.1| flageller protein FlgA [Rhodoferax ferrireducens T118]
 gi|89347210|gb|ABD71413.1| Flageller protein FlgA [Rhodoferax ferrireducens T118]
          Length = 246

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G A V    ++AG  L +  + E +V  +  R     +    +G V  R L     +   
Sbjct: 122 GQAWVVKGQVSAGAALTQDDVMEAEVDWAEQREAIISNPDQWLGQVANRALTSGQALRQG 181

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++    V   GA++R+ +      I++ G ALS   +G    VK ++ G ++SG V+D+ 
Sbjct: 182 MIRPAEVFRAGAQIRVQVQGAGFEITSDGQALSAGVVGQPARVK-MNNGHVMSGEVLDSR 240

Query: 146 TVRVVV 151
           TVR+ +
Sbjct: 241 TVRLEI 246


>gi|91224203|ref|ZP_01259466.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
 gi|91191114|gb|EAS77380.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
          Length = 236

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +  VGL T R L    V+  S L  P +I +G +V +I ++   + ST G+AL D + G 
Sbjct: 150 EQAVGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQ 209

Query: 125 VIAVKNIDTGVMV 137
            I V+N  +G ++
Sbjct: 210 QIDVENPSSGKVI 222


>gi|326319093|ref|YP_004236765.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375929|gb|ADX48198.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 259

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G A V +  + +G VL E+   + +V  +        + ++ VG V  R L+    +   
Sbjct: 135 GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAIVANPENWVGQVASRPLMAGQALRQH 194

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++  P     GA VR++      ++++AG A++  SIG+ + V+ +D G +++G V + G
Sbjct: 195 MVKAPMAFRAGAPVRVVAQGRGYSVTSAGQAVTAGSIGETVRVR-MDNGRVIAGIVSNDG 253

Query: 146 TVRV 149
           TV V
Sbjct: 254 TVEV 257


>gi|154253002|ref|YP_001413826.1| flagellar basal body P-ring biosynthesis protein FlgA [Parvibaculum
           lavamentivorans DS-1]
 gi|154156952|gb|ABS64169.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 326

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 55/115 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G+++    +  +++  + +  N   SI  +VG+  R        + LS +  P V+ 
Sbjct: 194 MQPGDIVRHQDIDWVRMPANRVSQNMIASIDHLVGMSPRHPARAGEPLRLSDMQPPLVVE 253

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           + A+V +    G +T++  G AL   ++GD++ V NI +   V G V     +R+
Sbjct: 254 KNAQVDMTFVSGALTLTARGRALQSGAVGDIVNVLNIRSNRTVQGIVTGPNLIRI 308


>gi|331671800|ref|ZP_08372596.1| SAF domain protein [Escherichia coli TA280]
 gi|331070789|gb|EGI42148.1| SAF domain protein [Escherichia coli TA280]
          Length = 252

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R N      D +G  ++  L P   I    L  P ++ R   V I
Sbjct: 143 NDVELKPYNV--SAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMI 200

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N  +  ++S  V ++G V  V
Sbjct: 201 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 249


>gi|293408363|ref|ZP_06652202.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471541|gb|EFF14024.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
            + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   
Sbjct: 155 ELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQNAGITASMPGVALKNGRK 214

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           G+++ V+N  +  ++S  V ++G V  V
Sbjct: 215 GEMVKVRNASSQRVISAMVEESGVVTTV 242


>gi|59889777|emb|CAH19132.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli]
 gi|284920041|emb|CBG33097.1| lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli 042]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R      + D +GL ++  L P   I    L  P ++ R   V I
Sbjct: 136 NDVELKPYNV--SAQRREVLMELDDAIGLSSKHALQPGKPITKEELVSPVLVGRDQPVMI 193

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N  +  ++S  V ++G V  V
Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|163803165|ref|ZP_02197048.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
 gi|159173065|gb|EDP57898.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
          Length = 228

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I   EV++ S LK    T S  + ++   +  V+GL T R +     I  + L 
Sbjct: 107 LVATSTIGRNEVISASNLKTETRTISR-QNDFFTQMNQVIGLETTRRIRAGQTIAPTNLS 165

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            P +I +G +V II ++   + ST G+AL     G  I V+N  +G ++
Sbjct: 166 SPPLIEKGNEVLIIASKEGFSASTKGVALEQGKKGQQIEVENTRSGKVI 214


>gi|218703521|ref|YP_002411040.1| lateral flagellar P-ring addition FlgA-like protein [Escherichia
           coli UMN026]
 gi|293403351|ref|ZP_06647442.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378963|ref|ZP_06988844.1| conserved hypothetical protein [Escherichia coli FVEC1302]
 gi|300900365|ref|ZP_07118540.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
 gi|218430618|emb|CAR11484.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli UMN026]
 gi|291429204|gb|EFF02224.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280076|gb|EFI21580.1| conserved hypothetical protein [Escherichia coli FVEC1302]
 gi|300356121|gb|EFJ71991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
           N+  LK   V  S  R N      D +G  ++  L P   I    L  P ++ R   V I
Sbjct: 136 NDVELKPYNV--SAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMI 193

Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +     +T S  G+AL +   G+++ V+N  +  ++S  V ++G V  V
Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|145297451|ref|YP_001140292.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850223|gb|ABO88544.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 226

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+ +    L E  +  S ++  +  S + +VG  + R L    +I    L + + + 
Sbjct: 110 IQKGQAIRAGDLVEKSLDISRLQRGFVPSSESLVGSKSTRNLRMGQLIGELDLQKAWAVR 169

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            G  V I       + +T G AL++ +IGD I V+NI +G  +   V+D G V
Sbjct: 170 EGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNISSGKEIQAWVIDKGEV 222


>gi|28897546|ref|NP_797151.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308094616|ref|ZP_05890645.2| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AN-5034]
 gi|308125762|ref|ZP_05777207.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus K5030]
 gi|308126465|ref|ZP_05910342.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|5361002|gb|AAD42909.1|U12817_3 polar flagellar FlgA homolog [Vibrio parahaemolyticus]
 gi|28805758|dbj|BAC59035.1| polar flagellar FlgA [Vibrio parahaemolyticus RIMD 2210633]
 gi|308090165|gb|EFO39860.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AN-5034]
 gi|308106761|gb|EFO44301.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|308115098|gb|EFO52638.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus K5030]
          Length = 248

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   S + VVG  + R V L D V    V 
Sbjct: 129 IVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC 188

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I   +  MTI+T G AL D + GD + VKN  +  ++ G V D   +
Sbjct: 189 ----VVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEI 244

Query: 148 RV 149
            V
Sbjct: 245 TV 246


>gi|229592136|ref|YP_002874255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           fluorescens SBW25]
 gi|229364002|emb|CAY51553.1| putative flagella basal body P-ring formation protein [Pseudomonas
           fluorescens SBW25]
          Length = 236

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S I   Y  S+   VG    R ++ D VI L  L +  VI +G +V I  + G + +   
Sbjct: 139 SMISQGYLTSLDQAVGQKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGGLNVKMP 198

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G ALS+  + + I VKN+++  ++   V   G V V +
Sbjct: 199 GEALSNGGMSEQIRVKNLNSNRVIKARVTAPGQVEVAL 236


>gi|32490786|ref|NP_871040.1| hypothetical protein WGLp037 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165992|dbj|BAC24183.1| flgA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 225

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           L  +F        V S +I +G +++E  +K +     NI  N   S + + G ++   +
Sbjct: 91  LLKIFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTKNIPQNIILSNQKISGKISTISI 150

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                I  S+L  P++I +G KV +I      TI   GI++ + +I D++ VK + +G +
Sbjct: 151 GIGQPITTSMLKSPWIIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKI 209

Query: 137 VSG 139
             G
Sbjct: 210 FQG 212


>gi|258622484|ref|ZP_05717506.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
 gi|262173350|ref|ZP_06041027.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|258585184|gb|EEW09911.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
 gi|261890708|gb|EEY36695.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
          Length = 265

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +   E +  S LK  + T +     Y ++ + V+GL T R +    ++  ++L 
Sbjct: 144 VVAKTTLRRDETIQASDLKIEKRTLTRQEDFYTNT-QQVIGLETTRRIRSGQIVSPNILR 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              ++ +G +V II ++   T +T GIAL     G  I V+N  +G ++   V D   V
Sbjct: 203 SSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVIRAVVTDLNQV 261


>gi|304321134|ref|YP_003854777.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
           HTCC2503]
 gi|303300036|gb|ADM09635.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
           HTCC2503]
          Length = 125

 Score = 43.5 bits (101), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%)

Query: 38  GEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
           GEV   +RL    V + S + GN  + +  +VG    R + P   I  S      ++ R 
Sbjct: 12  GEVHANARLPAGTVIDGSGLAGNE-NDVDRLVGRQLTRTIFPGRTISFSDTKEADLVDRN 70

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           + VRI+  +G M I T G AL   + G+ I V N+++   ++  +   G VRV
Sbjct: 71  STVRIVAVKGPMRIETKGRALGAGAEGEEILVMNLESRRTITAVISGPGEVRV 123


>gi|74101654|gb|AAZ99744.1| FlgAL [Aeromonas hydrophila]
          Length = 270

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+ +    L E  +  S ++  +  S + +VG  + R L    +I    L + + I 
Sbjct: 154 IQKGQTIRTGDLVEKSLDISRLQRGFVPSSESLVGSKSNRNLRMGQLIGELDLQKAWAIR 213

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            G  V I       + +T G AL++ +IGD I V+NI +G  +   V++ G V
Sbjct: 214 EGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNISSGKEIQAWVIEKGEV 266


>gi|34497155|ref|NP_901370.1| flagella basal body P-ring formation protein flgA [Chromobacterium
           violaceum ATCC 12472]
 gi|34103012|gb|AAQ59375.1| probable flagella basal body P-ring formation protein flgA
           [Chromobacterium violaceum ATCC 12472]
          Length = 236

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           GL +R  L  D  +    L  P  + RG  V I+  Q  + +++AG AL++   G+VI V
Sbjct: 154 GLASRTPLRQDQPLRRRQLQPPQWVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRV 213

Query: 129 KNIDTGVMVSGSVVDTGTV 147
           +N  +  +++  V   G V
Sbjct: 214 RNTSSNKIINARVSAQGEV 232


>gi|153839087|ref|ZP_01991754.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149747425|gb|EDM58385.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 248

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   S + VVG  + R V L D V    V 
Sbjct: 129 IVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC 188

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I   +  MTI+T G AL D + GD + VKN  +  ++ G V D   +
Sbjct: 189 ----VVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEI 244

Query: 148 RV 149
            +
Sbjct: 245 TI 246


>gi|292490649|ref|YP_003526088.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           halophilus Nc4]
 gi|291579244|gb|ADE13701.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           halophilus Nc4]
          Length = 221

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 6/123 (4%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           H +VP   ++  ++  E R  E       +R  Y      V G   +R L    VI   V
Sbjct: 103 HPLVPGSPLSLADIHLERRNLE------QLRQGYLRDPAQVAGKRLKRPLGLGAVITPEV 156

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L  P ++ RG +V +I     + +   G AL DA  G+ I V+N  +  +V G+V   G 
Sbjct: 157 LEIPKLVRRGQQVILIAKVPGLQVHMKGQALEDAGAGEHIRVRNNSSQRIVEGTVTADGI 216

Query: 147 VRV 149
           V+V
Sbjct: 217 VQV 219


>gi|322421661|ref|YP_004200884.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M18]
 gi|320128048|gb|ADW15608.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M18]
          Length = 238

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 59/127 (46%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +   VV +  +  GEVL+ S L  ++   + ++G Y   I +  GL  +  L  +  +
Sbjct: 110 EALAEMVVAARTLERGEVLSASDLAVVKRDLAQVQGRYFKEIGEAAGLRVKSTLKANSPV 169

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               L +  ++  G  V I+     + I+  G A    + GD+I V+N+ +   ++  VV
Sbjct: 170 RKDNLEKVPIVKSGQVVTIVAENDVVRITATGRAKVAGAQGDLITVQNLSSQKEIAARVV 229

Query: 143 DTGTVRV 149
           D  TV+V
Sbjct: 230 DAATVKV 236


>gi|15598546|ref|NP_252040.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PAO1]
 gi|218890454|ref|YP_002439318.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa LESB58]
 gi|254236312|ref|ZP_04929635.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
 gi|254242037|ref|ZP_04935359.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
 gi|9949483|gb|AAG06738.1|AE004757_7 hypothetical protein PA3350 [Pseudomonas aeruginosa PAO1]
 gi|126168243|gb|EAZ53754.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
 gi|126195415|gb|EAZ59478.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
 gi|218770677|emb|CAW26442.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa LESB58]
          Length = 232

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I
Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230


>gi|120613055|ref|YP_972733.1| SAF domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120591519|gb|ABM34959.1| SAF domain protein [Acidovorax citrulli AAC00-1]
          Length = 259

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G A V +  + +G VL E+   + +V  +        + ++ VG V  R L+    +   
Sbjct: 135 GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAIVANPENWVGQVASRPLMAGQALRQH 194

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++  P     G+ VR++      ++++AG A++  SIG+ + V+ +D G +++G V + G
Sbjct: 195 MVKAPMAFRAGSPVRVVAQGRGYSVTSAGQAVTAGSIGETVRVR-MDNGRIIAGIVSNDG 253

Query: 146 TVRV 149
           TV V
Sbjct: 254 TVEV 257


>gi|301646809|ref|ZP_07246661.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|331640709|ref|ZP_08341856.1| SAF domain protein [Escherichia coli H736]
 gi|301075002|gb|EFK89808.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|331040083|gb|EGI12291.1| SAF domain protein [Escherichia coli H736]
          Length = 252

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
            + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   
Sbjct: 162 ELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRK 221

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           G+++ V+N  +  ++S  V ++G V  V
Sbjct: 222 GEMVKVRNASSQRVISAMVAESGVVTTV 249


>gi|49082058|gb|AAT50429.1| PA3350 [synthetic construct]
          Length = 233

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I
Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230


>gi|107102882|ref|ZP_01366800.1| hypothetical protein PaerPA_01003950 [Pseudomonas aeruginosa PACS2]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I
Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230


>gi|152985501|ref|YP_001347163.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PA7]
 gi|150960659|gb|ABR82684.1| hypothetical protein PSPA7_1780 [Pseudomonas aeruginosa PA7]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+  + L +   + +G +V I+     + +   G AL+D + G  I
Sbjct: 148 VVGQKLRRPVINDQVLAPAFLEQAEAVRKGDQVVILARTATINVKMPGEALADGAPGQQI 207

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 208 RVRNLRSQRVIKARVLEPGTVEV 230


>gi|306813308|ref|ZP_07447501.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           NC101]
 gi|305854071|gb|EFM54510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           NC101]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 41/85 (48%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   G++
Sbjct: 158 DAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEM 217

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+N  +  ++S  V ++G V  V
Sbjct: 218 VKVRNASSQRVISAMVAESGVVTTV 242


>gi|70731829|ref|YP_261571.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           fluorescens Pf-5]
 gi|68346128|gb|AAY93734.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 253

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 46  LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
           L+E  ++ +N    Y  S+   +G    R ++ D ++ L+ L +  V+ +G +V I    
Sbjct: 150 LRERDISQNN--QGYLTSVDQAIGQKLVRPMVADQLVTLAHLEQAEVVRKGDQVVISARS 207

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G + +   G ALS+  + + I VKN+++  ++   +   G V V +
Sbjct: 208 GTLNVRMPGEALSNGGMSEQIRVKNLNSQRVIKARITAPGQVEVAM 253


>gi|58039416|ref|YP_191380.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Gluconobacter oxydans 621H]
 gi|58001830|gb|AAW60724.1| Flagella basal body P ring formation protein FlgA [Gluconobacter
           oxydans 621H]
          Length = 330

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D VGL  R VL    V+ +S L  P ++ RG+ V    +  ++ ++ +G  L    
Sbjct: 220 QSPEDAVGLEARGVLAAGQVLSVSELAHPQLVHRGSPVVATFSGPSLHLTVSGTVLEAGG 279

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            GD + V N  + ++++G VVD   V V+
Sbjct: 280 KGDTVHVYNASSRMVLTGRVVDRTEVEVI 308


>gi|307136854|ref|ZP_07496210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H736]
 gi|315616831|gb|EFU97448.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           3431]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
            + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   
Sbjct: 155 ELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRK 214

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           G+++ V+N  +  ++S  V ++G V  V
Sbjct: 215 GEMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|308095530|ref|ZP_05906616.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus Peru-466]
 gi|308086102|gb|EFO35797.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus Peru-466]
          Length = 216

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRG 96
           GE+++ S +    +     R +   S + VVG  + R V L D V    V     V+ R 
Sbjct: 106 GEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC----VVCRN 161

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            KV I   +  MTI+T G AL D + GD + VKN  +  ++ G V D   + V
Sbjct: 162 EKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEITV 214


>gi|285018214|ref|YP_003375925.1| flagellar basal body p-ring biosynthesis protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473432|emb|CBA15937.1| probable flagellar basal body p-ring biosynthesis protein
           [Xanthomonas albilineans]
          Length = 255

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 3   CVR---FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
           C R   + LF  + V  +  +   V+   +     I A +++ E R        + I G 
Sbjct: 112 CPRDAGWRLFVPVKVRRMQQVL--VLARGLTAGETIGAADIVPEKR------DAARIVGA 163

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
                   VG + RR L    ++ L  L  P ++ RG  V ++  +G + +  AG A+SD
Sbjct: 164 VMTDPAVAVGKLVRRTLPAGTLLSLGDLVSPRLVRRGDNVALVARKGGLEVRMAGRAMSD 223

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           A   + + V+N+ +  +V G+V   G V
Sbjct: 224 AGENERVTVENLSSRRIVQGTVSQNGDV 251


>gi|116051365|ref|YP_789802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|296388142|ref|ZP_06877617.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PAb1]
 gi|313108700|ref|ZP_07794696.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa 39016]
 gi|115586586|gb|ABJ12601.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310881198|gb|EFQ39792.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa 39016]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I
Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 208 RVRNLRSQRVIKARVIEPGTVEV 230


>gi|327254550|gb|EGE66166.1| lateral flagellar P-ring addition protein [Escherichia coli
           STEC_7v]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + + +GL ++  L P   +    L  P +I R   V I+     +T S  G+AL +   G
Sbjct: 147 LNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNGRKG 206

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +++ V+N  +  ++S  V ++G V  V
Sbjct: 207 EMVKVRNASSQRVISAMVAESGVVTTV 233


>gi|222053733|ref|YP_002536095.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           FRC-32]
 gi|221563022|gb|ACM18994.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           FRC-32]
          Length = 226

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  GEV++ + +   +   S ++G +   + +VVG   R  +  ++ I    L R  +I 
Sbjct: 110 LERGEVIDAADVAVQKRGLSRLQGRFVRDVDEVVGKRVRTAIRGNNPIRPDFLERVPLIK 169

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            G  V I+    ++ I+ AG A +  + GD + V+N+ +   +   V+D  TV+V
Sbjct: 170 SGQLVTIVAENESLRITAAGKARNSGAEGDTVMVRNLASQKELPARVIDAETVKV 224


>gi|291336858|gb|ADD96390.1| predicted flagellar basal body P ring biosynthesis protein
           [uncultured organism MedDCM-OCT-S09-C206]
          Length = 239

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I+ G+V++E  L         I G Y H I  V+G   +  +    ++    L   Y + 
Sbjct: 122 ISKGQVISEEYLGFEARPERQIHGAYNH-ISGVLGRKAKNNIAAGTILKARHLDTVYSVD 180

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           +   V +I     +TI+T+ IAL +  +GD+IAVKN+ +
Sbjct: 181 KNDSVLVIAANKAITITTSAIALENGQVGDMIAVKNVKS 219


>gi|323181543|gb|EFZ66963.1| lateral flagellar P-ring addition protein [Escherichia coli 1357]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   G
Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKG 215

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +++ V+N  +  ++S  V ++G V  V
Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|163784419|ref|ZP_02179303.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880310|gb|EDP73930.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 317

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            AVV    I  G +++   +K  +V   N    Y  +I  ++G   R  +     I L  
Sbjct: 191 KAVVAKRYIPKGSIISYDDVKIDKVKAKN-DERYFTNINKLIGKKLRFAVKKGQPITLKY 249

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L + Y + R   V ++  +    I   G AL +  +GD+I V+N  +G ++   V+    
Sbjct: 250 LEKEYYVFRNTNVEVLYEKNGFRIRLLGRALENGELGDLIRVRNTSSGKVILCKVIGKNK 309

Query: 147 VRVV 150
           V+ +
Sbjct: 310 VKFI 313


>gi|332305609|ref|YP_004433460.1| flagella basal body P-ring formation protein FlgA [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172938|gb|AEE22192.1| flagella basal body P-ring formation protein FlgA [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           VI +AV P      G +LN+S +K + +  + +R     ++ DV+G   +R + P   I 
Sbjct: 118 VISNAVSP------GTILNQSNIKLVDMNRALLRRTTFSTLDDVLGARIKRRVRPGQPIT 171

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            + L     + +G  + I  +   M +   G+A+ D +IGD I+V N  +   ++  V  
Sbjct: 172 PNNL---CFVCKGDTIVINASNPMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAS 228

Query: 144 TGTV 147
           T  V
Sbjct: 229 TSEV 232


>gi|323191534|gb|EFZ76795.1| lateral flagellar P-ring addition protein [Escherichia coli
           RN587/1]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 41/85 (48%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   G++
Sbjct: 158 DAIGFSSKHALQPGRPITKEELISPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEM 217

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+N  +  ++S  V ++G V  V
Sbjct: 218 VKVRNASSQRVISAMVAESGVVTTV 242


>gi|260768766|ref|ZP_05877700.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260616796|gb|EEX41981.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
          Length = 233

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + V+G   RR +   H+I  + L + YV+ +G  V +       T+ T   A S+  IGD
Sbjct: 148 EQVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAESNGLIGD 207

Query: 125 VIAVKNIDTGVMVSGSVVDTGTV 147
            I V++ D+G ++S  VV  G V
Sbjct: 208 TIWVRSRDSGRLLSVKVVGDGEV 230


>gi|323171059|gb|EFZ56708.1| lateral flagellar P-ring addition protein [Escherichia coli LT-68]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL +   G
Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGHKG 215

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +++ V+N  +  ++S  V ++G V  V
Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|156976137|ref|YP_001447043.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           harveyi ATCC BAA-1116]
 gi|156527731|gb|ABU72816.1| hypothetical protein VIBHAR_04908 [Vibrio harveyi ATCC BAA-1116]
          Length = 265

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I   E ++ S LK    T S  + ++       +GL T R +    +I  + L 
Sbjct: 144 LVATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIRAGQIIDPTNLS 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            P +I +G +V II ++   + ST G+AL     G  I V+NI +G ++
Sbjct: 203 SPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENISSGKVI 251


>gi|118581850|ref|YP_903100.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118504560|gb|ABL01043.1| SAF domain protein [Pelobacter propionicus DSM 2379]
          Length = 238

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G V+  + L   +   + ++G Y    +D VG   R  L P+  I    L +  +I 
Sbjct: 122 INHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPNAAIRSDQLEKVPLIR 181

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            G  V II     M I+  G + S  + GD I V+N+ +   +   V+D+ TV +V
Sbjct: 182 AGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIV 237


>gi|237755438|ref|ZP_04584063.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692402|gb|EEP61385.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 170

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 30/58 (51%)

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            Y I +  KV I+    N+ I   G+AL +   GD I VKNI TG  + G V+   TV
Sbjct: 106 KYKIVKNQKVGIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTV 163


>gi|300936121|ref|ZP_07151060.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
 gi|300458699|gb|EFK22192.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
          Length = 252

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           D +G  ++  L P   I    L  P ++ R   V I+     ++ S  G+AL +   G++
Sbjct: 165 DAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGISASMPGVALKNGRKGEM 224

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+N  +  ++S  V ++G V  V
Sbjct: 225 VKVRNASSQRVISARVAESGVVTTV 249


>gi|323975934|gb|EGB71028.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TW10509]
          Length = 252

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + + +GL ++  L P   +    L  P +I R   V I+     +T S  G+AL +   G
Sbjct: 163 LNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNGRKG 222

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +++ V+N  +  ++S  V ++G V  V
Sbjct: 223 EMVKVRNASSQRVISAIVAESGVVTTV 249


>gi|85058007|ref|YP_453709.1| flagellar basal body P-ring formation protein FlgA [Sodalis
           glossinidius str. 'morsitans']
 gi|84778527|dbj|BAE73304.1| flagellar basal body P-ring formation protein FlgA [Sodalis
           glossinidius str. 'morsitans']
          Length = 238

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
           N   + + V G +T R +     +  ++L  P+ + +G  V ++       +   G A+S
Sbjct: 136 NVIFATQPVTGSLTTRAIQAGQPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMS 195

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           DA++GD + V+ + +G MVSG+V + G V
Sbjct: 196 DAAVGDALRVR-LASGQMVSGAVDNQGVV 223


>gi|85706166|ref|ZP_01037261.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. 217]
 gi|85669330|gb|EAQ24196.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. 217]
          Length = 139

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +RFL  F + +++  +L        VV +  I A EVL  + L  +      I     H 
Sbjct: 2   MRFLTSFLMLIIANPAL-----ADMVVATRTIRAQEVLGPADL--LLKPGEGISDVTLH- 53

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
             D++G   R  L P   I    +  P VI R   V ++     + I T G +LS A +G
Sbjct: 54  --DLIGQEVRVALYPGRQIRAVDVGPPTVIERNQIVPLVYAHSGLRIETEGRSLSRAGVG 111

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTV 147
           D + V N+ +   VSG V  TG +
Sbjct: 112 DYVRVMNLASRATVSGRVTQTGHI 135


>gi|14581460|gb|AAK31635.1| FlgA [Pseudomonas aeruginosa]
          Length = 188

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVG   RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I
Sbjct: 104 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 163

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +  ++   V++ GTV V
Sbjct: 164 RVRNLRSQRIIKARVIEPGTVEV 186


>gi|312880334|ref|ZP_07740134.1| flagella basal body P-ring formation protein FlgA [Aminomonas
           paucivorans DSM 12260]
 gi|310783625|gb|EFQ24023.1| flagella basal body P-ring formation protein FlgA [Aminomonas
           paucivorans DSM 12260]
          Length = 312

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY---AHSIKDVVGLVTRRVLL 77
           F  V+     P VV  +     E+  +E       I+  Y   AHS + V G V R  + 
Sbjct: 173 FVRVVLRWYQPQVVAKSPLRKGETIRREDVFLRLGIQDTYRLLAHSFQQVEGKVLRIPVK 232

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
               + + VL R  V+  G +V +    G++ +   G AL   ++GD I V+N+DT  +V
Sbjct: 233 AGVPVAMEVLVRDEVVHAGNQVVLSSVVGSVAVEAKGRALEQGAVGDTIRVRNLDTRQIV 292

Query: 138 SGSVVDTGTVRVVVK 152
           SG V+  G V ++ K
Sbjct: 293 SGVVIGPGRVEILQK 307


>gi|262273533|ref|ZP_06051347.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
 gi|262222511|gb|EEY73822.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
          Length = 224

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 44/95 (46%)

Query: 56  IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
           +R  +    + ++G   RR + P  ++   ++ RP  + R  +V I   +  M     GI
Sbjct: 129 VRHGFFTDTEPLIGKQVRRNISPGRILTPKLIDRPVWVKRDQEVIIEARRDTMIARMKGI 188

Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           AL + S GD+I VKN  +   +   V   GTV  +
Sbjct: 189 ALENGSEGDIIRVKNSTSEKEIRARVSSPGTVSTI 223


>gi|220934388|ref|YP_002513287.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995698|gb|ACL72300.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 262

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV     +  +V G  VV    +  G  L    L+  +     + G Y + ++    
Sbjct: 125 WSLYV----PVHVAVHGEVVVLGHPLPRGMQLEAQHLRLERHDVGALPGGYLNDLELARD 180

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +V RR L    V+   ++  P ++ RG +V ++     + +   G AL+D S G+ + V+
Sbjct: 181 MVLRRALPAGTVLTPQMVEPPRLVRRGQRVTLLAEGSAVNVRVEGEALADGSRGERVQVR 240

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +  +V G V+  G V
Sbjct: 241 NLSSRRVVEGVVLSHGVV 258


>gi|146341905|ref|YP_001206953.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium sp. ORS278]
 gi|146194711|emb|CAL78736.1| putative flagellar protein FlgA [Bradyrhizobium sp. ORS278]
          Length = 351

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 5   RFLLFFSLYV----------LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
           RF + F L             +++++ A V+   +  + VI AG++  E R K       
Sbjct: 170 RFDIVFELGTAGSTKLRYTGTAIETVEAVVLTRNIDRNEVIRAGDLQTERRPK------V 223

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
            + G    S +  VG+  RR +     +  + L +P ++ R   V +I     + ++T G
Sbjct: 224 ELGGAEPASRELAVGMQMRRPVRAGQALKATDLAKPDLVQRDQTVTLIYQTAGIYLTTRG 283

Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            AL   + GDV++V N+ +   ++G V+  G V +
Sbjct: 284 KALESGTEGDVVSVLNLQSKRTITGRVIGRGQVSI 318


>gi|90408053|ref|ZP_01216224.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
           CNPT3]
 gi|90310810|gb|EAS38924.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
           CNPT3]
          Length = 230

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP--- 83
             ++ +  +  GE LN + +K   +T S +RG      K ++G   +R +    +I    
Sbjct: 109 RTIISAQALRKGETLNNNNIKVTYLTKSQLRGGSFSQKKILIGSRLKRNMGAQKIIKNRD 168

Query: 84  -LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              V  +  VI       I   +  + I T+GIAL++A+IG+ + VKN  +  +V G+V 
Sbjct: 169 VCFVCQKDQVI-------ISAIKAGLVIKTSGIALNNANIGESVRVKNSRSQRIVVGTVS 221

Query: 143 DTGTVRV 149
               V+V
Sbjct: 222 AQKEVQV 228


>gi|302392938|ref|YP_003828758.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
           arabaticum DSM 5501]
 gi|302205015|gb|ADL13693.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
           arabaticum DSM 5501]
          Length = 328

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P ++ R  +V+II   G + +STAG+AL   + G+ I V+NI +   +   V+   TV+V
Sbjct: 267 PPLVKRRDRVKIIAVVGRVRVSTAGVALESGTEGEHIKVRNIKSNREIMAKVIGKKTVKV 326

Query: 150 VV 151
           ++
Sbjct: 327 IL 328


>gi|238758114|ref|ZP_04619294.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
           ATCC 35236]
 gi|238703652|gb|EEP96189.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
           ATCC 35236]
          Length = 226

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R +VI  G  V+I+       I++ G A+++A++ D + V
Sbjct: 145 GAVSLRQINAGQPLTRNMLRRLWVIKAGQDVQILAQGEGFNINSTGKAMNNAAVQDSVRV 204

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+++++
Sbjct: 205 R-MASGQIVSGTVADNGTIQIML 226


>gi|149191168|ref|ZP_01869426.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
           AK1]
 gi|148835006|gb|EDL51985.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
           AK1]
          Length = 235

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +VVG   +R +    ++  S L+  Y + +G  V ++     + + T G AL    +GD 
Sbjct: 151 EVVGSKLKRSVKKGELLTTSRLYLDYDVEKGQAVDVVYQSETIRLETLGTALESGLVGDT 210

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
           ++V+N  +G ++ G V     VRV
Sbjct: 211 VSVQNQQSGKLLRGVVTKKNQVRV 234


>gi|302878272|ref|YP_003846836.1| flagella basal body P-ring formation protein FlgA [Gallionella
           capsiferriformans ES-2]
 gi|302581061|gb|ADL55072.1| flagella basal body P-ring formation protein FlgA [Gallionella
           capsiferriformans ES-2]
          Length = 225

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           G+++ E+ L  +Q   +   G    S+  +VG V R  +   +++   +L  PY I +G 
Sbjct: 115 GQIVRETDLARLQTETTLNSGITDASL--IVGKVLRYSVAAGYILREDMLRPPYSIKQGQ 172

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            V + +     T+S++G+AL++AS G+ +  +   +G ++SG+    G +
Sbjct: 173 TVNLSIQANGFTLSSSGVALNNASEGETVQART-SSGRVISGTASADGVI 221


>gi|15606189|ref|NP_213566.1| flagellar protein FlgA [Aquifex aeolicus VF5]
 gi|6225340|sp|O67005|FLGA_AQUAE RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|2983376|gb|AAC06962.1| flagellar protein FlgA [Aquifex aeolicus VF5]
          Length = 223

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  GE LN S ++E ++       N+  +  + V L   + +    ++  S L + +++ 
Sbjct: 110 IYPGERLNFSNVEEREIYLERCPQNFKENFVNFVAL---KEIKKGTIVRRSYLKKEFLVK 166

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           RG  V  +   GN+ I     AL +   G+VI V +  +  ++ G ++  GTV+++
Sbjct: 167 RGEIVNAVYENGNVVIRFRTKALENGYYGEVIRVLSPFSRKVIRGKIIGEGTVKIL 222


>gi|157363240|ref|YP_001470007.1| SAF domain-containing protein [Thermotoga lettingae TMO]
 gi|157313844|gb|ABV32943.1| SAF domain protein [Thermotoga lettingae TMO]
          Length = 219

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/105 (20%), Positives = 53/105 (50%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I +GE++    ++ ++      +GN+ ++++ V G V+R++      I L  L +   + 
Sbjct: 102 IKSGEIIKREDVELVEFDVFGKKGNFTNNLEVVAGKVSRKMFREGEPIDLFYLVKAPDVR 161

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            G  +  +   G++  +     L D + G+++  +N+DTG ++ G
Sbjct: 162 AGQVLLAVFETGSVLATALVRVLHDGNFGEIVKARNVDTGFLIQG 206


>gi|170737034|ref|YP_001778294.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           cenocepacia MC0-3]
 gi|169819222|gb|ACA93804.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           cenocepacia MC0-3]
          Length = 252

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  + +G  LNE+  K+  V +  +  +        VG + RR +    VI   +L+
Sbjct: 128 LVATTALRSGHTLNEADFKQ-DVRDFALTPDALTDPALAVGRMLRRTVKAGQVIQARLLN 186

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               I RG  V+I    G + +S  G A+ + ++ +VI VKN  TG ++   V    TV 
Sbjct: 187 GAETIRRGQAVQIEANTGPIRVSVPGTAMQNGAVDEVIRVKNASTGKVIFARVTGADTVE 246

Query: 149 VV 150
            V
Sbjct: 247 PV 248


>gi|328473460|gb|EGF44308.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus 10329]
          Length = 198

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRG 96
           GE+++ S +    +     R +   S + VVG  + R V L D V    V     V+ R 
Sbjct: 88  GEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC----VVCRN 143

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            KV I   +  MTI+T G AL D + GD + VKN  +  ++ G V D
Sbjct: 144 EKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTD 190


>gi|109899408|ref|YP_662663.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pseudoalteromonas atlantica T6c]
 gi|109701689|gb|ABG41609.1| flagella basal body P ring formation protein FlgA
           [Pseudoalteromonas atlantica T6c]
          Length = 236

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           VI +AV P      G +LN+S ++ + +  + +R     ++ DV+G   +R + P   I 
Sbjct: 118 VISNAVSP------GTILNQSNIELINMNRALLRRTTFSNVDDVMGARIKRRVRPGQPIT 171

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            + L     + +G  + I  +   M +   G+A+ D +IGD I+V N  +   ++  V  
Sbjct: 172 PNNL---CFVCKGDTIIINASNSMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAS 228

Query: 144 TGTV 147
           T  V
Sbjct: 229 TSEV 232


>gi|144897833|emb|CAM74697.1| Distal basal body ring component protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 317

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 55/115 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +N G+++ E+ +K +++     R +    +  ++G   R+ +  D  +  S L RP ++ 
Sbjct: 193 LNRGDIITEADIKWVELRADVARRDIIIDVDQIIGQEPRQPVRADAPLRASELRRPVLVE 252

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           R A V + L   NM++++   A      GDVI + N+ +   V   V   G V V
Sbjct: 253 RNAMVTVTLKTANMSLTSQAKATEAGGKGDVIRITNLQSKRTVEAVVEGPGLVSV 307


>gi|2494515|sp|Q56892|FLGA_YEREN RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|793897|emb|CAA88191.1| flgA [Yersinia enterocolitica]
          Length = 224

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%)

Query: 23  SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76
            V GH  V +  + AGE   L + ++K+ ++      + +  N+A       G V+ R +
Sbjct: 97  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 150

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                +  ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +
Sbjct: 151 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 209

Query: 137 VSGSVVDTGTVRVVV 151
           VSG+V D GTV +++
Sbjct: 210 VSGTVADDGTVHILL 224


>gi|322832560|ref|YP_004212587.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
           Y9602]
 gi|321167761|gb|ADW73460.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
           Y9602]
          Length = 260

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S + V G+  R + +    + LS+L RP+++  G +V++  T     +S+AG A+++A+ 
Sbjct: 174 SQQAVNGITLRNISI-GQPLTLSMLRRPWMVHAGQEVQVQATGSGFNVSSAGKAMNNAAA 232

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
            + + ++ + +G +V+G+V   G+V V +
Sbjct: 233 NESVRIR-MPSGAIVNGTVGSDGSVTVTI 260


>gi|332161318|ref|YP_004297895.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665548|gb|ADZ42192.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 226

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%)

Query: 23  SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76
            V GH  V +  + AGE   L + ++K+ ++      + +  N+A       G V+ R +
Sbjct: 99  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 152

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                +  ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +
Sbjct: 153 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 211

Query: 137 VSGSVVDTGTVRVVV 151
           VSG+V D GTV +++
Sbjct: 212 VSGTVADDGTVHILL 226


>gi|163802609|ref|ZP_02196501.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
 gi|159173692|gb|EDP58511.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
          Length = 216

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 28  AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82
           A VP +V    +  GE+++ S +    +     R +   + + VVG  + R V L D V 
Sbjct: 92  ASVPMIVSTRQLGRGEIISTSDVTTSMIELQRFRKDGFTTYEQVVGAKLKRNVRLGDVVE 151

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              V     V+ R  KV I   +G MTI+T G AL D + GD + VKN  +  ++ G V 
Sbjct: 152 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVT 207

Query: 143 D 143
           +
Sbjct: 208 N 208


>gi|149203124|ref|ZP_01880095.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. TM1035]
 gi|149143670|gb|EDM31706.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. TM1035]
          Length = 138

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +++D++G   R  L P   +    +  P V+ R   V +I  +G + I T G +L  A I
Sbjct: 50  ALEDLIGQEARVALYPGRPVRQGDVGPPTVVERNQVVPLIYLRGGLEIMTEGRSLDRAGI 109

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTV 147
           GD + V N+ +   VSG V   G +
Sbjct: 110 GDHVRVMNLASRATVSGRVTANGQI 134


>gi|330860611|emb|CBX70908.1| flagella basal body P-ring formation protein flgA [Yersinia
           enterocolitica W22703]
          Length = 161

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%)

Query: 23  SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76
            V GH  V +  + AGE   L + ++K+ ++      + +  N+A       G V+ R +
Sbjct: 34  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 87

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                +  ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +
Sbjct: 88  NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 146

Query: 137 VSGSVVDTGTVRVVV 151
           VSG+V D GTV +++
Sbjct: 147 VSGTVADDGTVHILL 161


>gi|188997556|ref|YP_001931807.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932623|gb|ACD67253.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 170

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            + + +  KV I+    N+ I   G+AL +   GD I VKNI TG  + G V+   TV
Sbjct: 106 KWAVVKNQKVSIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTV 163


>gi|148256793|ref|YP_001241378.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium sp. BTAi1]
 gi|146408966|gb|ABQ37472.1| putative flagellar protein FlgA [Bradyrhizobium sp. BTAi1]
          Length = 355

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 55/115 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           ++  E++  S L+  +   + + G    S +  VG+  RR +     +  + L +P ++ 
Sbjct: 207 VDRNEMIRSSDLQIERRPRAELAGGEPASRELAVGMQMRRAVRAGQALKTTDLAKPDLVQ 266

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           R   V +I     + ++T G AL   + GDV++V N+ +   V+G V   G V V
Sbjct: 267 RDQTVTLIYQTAGIYLTTRGKALEAGTDGDVVSVLNLQSKRTVTGRVTGRGQVSV 321


>gi|156973578|ref|YP_001444485.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           harveyi ATCC BAA-1116]
 gi|156525172|gb|ABU70258.1| hypothetical protein VIBHAR_01281 [Vibrio harveyi ATCC BAA-1116]
          Length = 248

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 28  AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82
           A VP +V    +  GE+++ S +    +     R +   +   V+G  + R V L D V 
Sbjct: 124 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIGAKLKRNVRLGDVVE 183

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
              V     V+ R  KV I   +G MTI+T G AL D S GD + VKN  +  ++ G
Sbjct: 184 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 236


>gi|330811241|ref|YP_004355703.1| flagella basal body P-ring formation protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379349|gb|AEA70699.1| Putative flagella basal body P-ring formation protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 254

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S I   +  S+   +G    R ++ D V+ L  L +  V+ +G +V I    G++ +   
Sbjct: 157 SQITQGFLTSVDQAIGQKLVRPMVADQVVTLVHLEQAEVVRKGDQVVITARTGSLAVRMP 216

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           G ALS+  + + I VKN+++  ++   V+  G V V +
Sbjct: 217 GEALSNGGMREQIRVKNLNSQRVIKAQVMAPGQVEVAM 254


>gi|261344146|ref|ZP_05971790.1| flagella basal body P-ring formation protein FlgA [Providencia
           rustigianii DSM 4541]
 gi|282567739|gb|EFB73274.1| flagella basal body P-ring formation protein FlgA [Providencia
           rustigianii DSM 4541]
          Length = 222

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G +  R +     +  S++ RP+ I  G  V +  T  N ++   G A+++A IG+ I V
Sbjct: 140 GTIALRNITAGQTLTNSMVRRPWAIKSGQTVHVFATGNNFSVKYEGRAINNAVIGENIRV 199

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + I+ G +V+G   + G+V+V +
Sbjct: 200 RLIN-GQVVNGEAQENGSVQVAL 221


>gi|294140178|ref|YP_003556156.1| flagellar basal-body P-ring formation protein FlgA [Shewanella
           violacea DSS12]
 gi|293326647|dbj|BAJ01378.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella violacea DSS12]
          Length = 234

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 56  IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
           +RG   +++ +VVG   +R    +  I  + L     + +G  V I     N  I T G 
Sbjct: 142 LRGQQFNNLAEVVGTRVKRRTPANQPIFSNNL---CFVCKGDSVSIFARTDNFEIKTVGE 198

Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           AL D ++GD I +KN  +   V   V+D G V V
Sbjct: 199 ALQDGNLGDRIRIKNTYSHKTVDARVIDVGKVEV 232


>gi|153834451|ref|ZP_01987118.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
 gi|148869147|gb|EDL68179.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
          Length = 243

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 28  AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82
           A VP +V    +  GE+++ S +    +     R +   +   V+G  + R V L D V 
Sbjct: 119 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIGAKLKRNVRLGDVVE 178

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
              V     V+ R  KV I   +G MTI+T G AL D S GD + VKN  +  ++ G
Sbjct: 179 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 231


>gi|91225867|ref|ZP_01260836.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
 gi|91189517|gb|EAS75793.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
          Length = 248

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   S   VVG  + R V L D V    V 
Sbjct: 129 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVGAKLKRNVRLGDVVERNDVC 188

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I      MTI+T G AL D S GD + VKN  +  ++ G V D   +
Sbjct: 189 ----VVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEGIVTDIAEI 244

Query: 148 RV 149
            V
Sbjct: 245 TV 246


>gi|85859197|ref|YP_461399.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
           aciditrophicus SB]
 gi|85722288|gb|ABC77231.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
           aciditrophicus SB]
          Length = 244

 Score = 42.0 bits (97), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 38/67 (56%)

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S+L  P +  +G  V++I   G ++I+T G+A  + ++G  + +KNI +  ++   V+  
Sbjct: 178 SMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGN 237

Query: 145 GTVRVVV 151
             V+V +
Sbjct: 238 SVVKVEI 244


>gi|126738577|ref|ZP_01754282.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
           SK209-2-6]
 gi|126720376|gb|EBA17082.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
           SK209-2-6]
          Length = 138

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           ++ LL F L  ++  S  A ++    VP   I A E++  + L   +V       N   +
Sbjct: 1   MKHLLAF-LIAVTAQSALADIL----VPLRTIRAKEIIQATDLTFKKV-------NLPGA 48

Query: 64  IKD---VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           + D   VVG+  R  L P   +    +  P ++ R   V +   QG +TI T G +L   
Sbjct: 49  LSDANVVVGMEARVALYPGRPMRAGDIGPPAIVDRNDLVTLAYRQGGLTIITEGRSLGRG 108

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           S G++I V N+ +   V+G +   G+V V
Sbjct: 109 SEGEIIKVMNLASRSTVTGRINADGSVEV 137


>gi|260429306|ref|ZP_05783283.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
           SE45]
 gi|260419929|gb|EEX13182.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
           SE45]
          Length = 139

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)

Query: 61  AH-SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           AH S+ DVVG      + P   + +  +  P +I R   V +I  +G + I+T G AL+ 
Sbjct: 47  AHDSLADVVGQEALVAIYPGRPVLIGTVGIPALIERNQIVELIFAKGALQIATEGRALAR 106

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            ++G+ I V N+ +   + G+V + G V
Sbjct: 107 GAVGERIRVMNLSSRTTLFGTVTEAGAV 134


>gi|94500235|ref|ZP_01306768.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
           RED65]
 gi|94427534|gb|EAT12511.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
           RED65]
          Length = 248

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 31  PSVVINA---GEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           P VV+N     ++  ++R  ++++ N +++R  Y    ++V+G  ++R L    V+   +
Sbjct: 124 PVVVLNQPVPKDIELQARHLDLEIHNLADLRSGYFLKKENVIGKQSKRGLAGQTVLNGRL 183

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +    ++ +G +V I  ++G M++   G AL+D   G  I VKN+ +  ++  +V ++G 
Sbjct: 184 VLPALLVKKGDRVIISASKGPMSVKMPGEALNDGREGRQIRVKNLRSERIIRATVEESGV 243

Query: 147 VRV 149
           V V
Sbjct: 244 VSV 246


>gi|170021364|ref|YP_001726318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ATCC 8739]
 gi|188492061|ref|ZP_02999331.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
 gi|169756292|gb|ACA78991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ATCC 8739]
 gi|188487260|gb|EDU62363.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + D +G  ++  L P   I    L  P ++ R   V I+     ++ S  G+AL +   G
Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGISASMPGVALKNGRKG 215

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +++ V+N  +  ++S  V ++G V  V
Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|183598613|ref|ZP_02960106.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
 gi|188020792|gb|EDU58832.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
          Length = 218

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S++ RP+ +  G  V +     N ++   G A+++A+ G+   V+ I+ G +V+G  ++ 
Sbjct: 152 SMMRRPWAVKAGQNVYVFANGHNFSVKYEGRAINNAATGENTRVRLIN-GQVVNGEALEN 210

Query: 145 GTVRVVVK 152
           G+VRV +K
Sbjct: 211 GSVRVALK 218


>gi|315180469|gb|ADT87383.1| flagellar basal body P-ring biosynthesis protein flgA [Vibrio
           furnissii NCTC 11218]
          Length = 233

 Score = 41.6 bits (96), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + V+G   RR +   H+I  + L + YV+ +G  V +       T+ T   A ++  IGD
Sbjct: 148 EQVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAENNGLIGD 207

Query: 125 VIAVKNIDTGVMVSGSVVDTGTV 147
            I V++ D+G ++S  VV  G V
Sbjct: 208 TIWVRSRDSGRLLSVKVVGDGEV 230


>gi|149188060|ref|ZP_01866355.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
 gi|148838048|gb|EDL54990.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
          Length = 248

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           V+ R  KV I   +G MTIST G AL+D + GD + VKN  +  ++ G V  TG   + V
Sbjct: 189 VVCRNEKVVIRAVKGEMTISTKGTALTDGANGDQVRVKNDKSQRIIEGIV--TGVAEITV 246


>gi|120554102|ref|YP_958453.1| SAF domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120323951|gb|ABM18266.1| SAF domain [Marinobacter aquaeolei VT8]
          Length = 235

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + V G++ RR +    V+   +L  P  I RG  V I    G+ ++S+ G AL+ A +G+
Sbjct: 149 ESVSGMMMRRPVNAGTVMTPDLLEAPNAIERGDHVIITARSGSFSVSSRGKALASAGVGE 208

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
            + V+N+ +   V    V  G V +
Sbjct: 209 QVLVENLRSSRTVKARAVGPGRVEI 233


>gi|254488219|ref|ZP_05101424.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
           GAI101]
 gi|214045088|gb|EEB85726.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
           GAI101]
          Length = 123

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIP 83
           +   VVP+  + A  ++ E     M V   N+   +    ++DV+G   R VL     I 
Sbjct: 1   MAQVVVPTRTVRADAIITE-----MDVMIGNVSAADGFDRLRDVIGQEARVVLYAGRPIM 55

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
           L  +  P ++ R   V +      + I+T G AL    +GD I V N+ +   + G V  
Sbjct: 56  LDQIGPPAIVDRNQIVSLFFEGRGLRIATEGRALERGGVGDNIRVMNLASRATLFGQVQQ 115

Query: 144 TGTVRV 149
            GT+++
Sbjct: 116 DGTIQI 121


>gi|119775456|ref|YP_928196.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           amazonensis SB2B]
 gi|119767956|gb|ABM00527.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella amazonensis SB2B]
          Length = 235

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S+ A V+   VV    +  G++L+   ++   V  + +RG     ++ + G   +R +  
Sbjct: 106 SVRAEVLFPVVVAKRPLGNGDLLDAESIEVRYVDKTLLRGQQFSHLQPLYGSRVKRRIPQ 165

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
           D  I    L     + +G  V I     +  I T G AL+D + GD I +KNI++  ++ 
Sbjct: 166 DAPIFADNL---CFVCKGDAVTIYAKSASFEIKTQGEALADGNEGDRIRIKNINSDRVLE 222

Query: 139 GSVVDTGTVRV 149
            +V+  G V V
Sbjct: 223 ATVIGVGEVEV 233


>gi|332531614|ref|ZP_08407511.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
 gi|332038977|gb|EGI75406.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
          Length = 288

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVT----NSNI 56
           M CV+    +S+ +     +   V+G A V    + AG+ + +  L+  +V     NS +
Sbjct: 144 MRCVQGATRWSVTL----PVQVQVMGSAWVLRANVPAGQAVTDQDLERREVDLAEDNSPV 199

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
               A       G VT R L     +  ++     V + GA+VR+++      IS  G A
Sbjct: 200 LATDAWE-----GQVTSRGLRAGQTLRQNMFRAAKVFTSGAQVRVLVQGSGFQISAPGRA 254

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           LS   +G +  V+ ++ G +++ +VVD  TVRV +
Sbjct: 255 LSVGVVGQLAQVR-MENGRVMNATVVDARTVRVEI 288


>gi|154249530|ref|YP_001410355.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153466|gb|ABS60698.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 319

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 37/56 (66%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +I +G  V+ I   G + +ST   AL + ++G VI+VKN++ GV++ G++ + GT+
Sbjct: 258 LIVKGQVVKAISIVGGVMVSTLVQALENGNVGKVISVKNLENGVIIKGTIQEDGTI 313


>gi|146278640|ref|YP_001168799.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556881|gb|ABP71494.1| SAF domain [Rhodobacter sphaeroides ATCC 17025]
          Length = 139

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +VL L  L +      VV +  I A EVL      ++ +    + G      +  +GL  
Sbjct: 3   WVLLLLCLASPAPADTVVATRTIRALEVLGPG---DLALRPETLPGTLTEPAQ-AIGLEA 58

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           R  L     + +  +  P +++R   V +  + G + I   G AL+   +GDVI V N+ 
Sbjct: 59  RVTLYAGRPVGIGDVGPPGIVNRNQIVPLAYSLGALEIRAEGRALARGGVGDVIRVMNLS 118

Query: 133 TGVMVSGSVVDTGTVRV 149
           +   VSG + D G+V V
Sbjct: 119 SRSTVSGRIADDGSVHV 135


>gi|222100098|ref|YP_002534666.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
 gi|221572488|gb|ACM23300.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
          Length = 287

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 58/116 (50%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  +   +     I G   +++ +VVG+V++R L    V+  ++L  P  + 
Sbjct: 168 INVGDVIKEDFVTVEERDIFEINGEPFYNVSEVVGMVSKRYLRSGTVLTKNMLEHPPDVV 227

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +G  V   +  G++ +ST    L +  +G+ +   N+++   V G V     +R++
Sbjct: 228 KGQIVPAYVDLGSIKVSTFVEILENGHLGETVKAMNVESRKYVFGRVEKGPVLRIL 283


>gi|313894969|ref|ZP_07828528.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312976422|gb|EFR41878.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 233

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V  R +  D VI  + L  P VI  G  V +I     + +   G A+    IG  I V
Sbjct: 151 GRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRV 210

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
           +N+ +G ++ G V+D  TV++
Sbjct: 211 RNVRSGKILRGKVIDAETVQI 231


>gi|238799103|ref|ZP_04642559.1| Flagella basal body P-ring formation protein flgA [Yersinia
           mollaretii ATCC 43969]
 gi|238717050|gb|EEQ08910.1| Flagella basal body P-ring formation protein flgA [Yersinia
           mollaretii ATCC 43969]
          Length = 234

 Score = 41.2 bits (95), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R ++I  G  V+++       +++ G A+++A+I D + V
Sbjct: 153 GSVSLRQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGDGFNVNSNGKAMNNAAIQDSVRV 212

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG V D GT+R+++
Sbjct: 213 R-MPSGQIVSGVVADDGTIRIML 234


>gi|320530442|ref|ZP_08031500.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           artemidis F0399]
 gi|320137275|gb|EFW29199.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           artemidis F0399]
          Length = 254

 Score = 41.2 bits (95), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V  R +  D VI  + L  P VI  G  V +I     + +   G A+    IG  I V
Sbjct: 172 GRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRV 231

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
           +N+ +G ++ G V+D  TV++
Sbjct: 232 RNVRSGKILRGKVIDGETVQI 252


>gi|42522135|ref|NP_967515.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
 gi|39574666|emb|CAE78508.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
          Length = 310

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V + +I  GE +    L+ M +T+     + +  ++D+ G +  R L     +  S L R
Sbjct: 191 VTTRLILQGERVQADDLR-MSMTDVTFAKDGSLRMEDIQGQMAARSLPVGSTVWASDLKR 249

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
                +G  V+ +L   +  IS   +A     +GD+I VKN++T  ++SG V + G V++
Sbjct: 250 EPAAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVLSGLVTEKGVVKL 309


>gi|289523331|ref|ZP_06440185.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503023|gb|EFD24187.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 305

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           Y++ RG +VR+ +  G +++ T   AL   ++GD+I V N+D+   +S  V   G V
Sbjct: 242 YLVKRGDRVRLYVNSGMISVETVAKALDSGALGDIIRVINLDSRRTISAKVAGKGAV 298


>gi|78485818|ref|YP_391743.1| flageller protein FlgA [Thiomicrospira crunogena XCL-2]
 gi|78364104|gb|ABB42069.1| Flageller basal body P-ring formation protein FlgA [Thiomicrospira
           crunogena XCL-2]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G+  +R L P+ ++ +  L  PY++     V II   GN+ + + G AL D      + 
Sbjct: 163 IGMRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVP 222

Query: 128 VKNIDTGVMVSGSVVDTGTV 147
           V+N+ +  ++ G V+   TV
Sbjct: 223 VENLSSKKIIKGIVIAPNTV 242


>gi|318605238|emb|CBY26736.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 226

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 71/135 (52%), Gaps = 13/135 (9%)

Query: 23  SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76
            V GH  V +  + AGE   L + ++K+ ++      + +  N+A       G V+ R +
Sbjct: 99  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 152

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                +  ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +
Sbjct: 153 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 211

Query: 137 VSGSVVDTGTVRVVV 151
           V+G+V D GTV +++
Sbjct: 212 VNGTVADDGTVHILL 226


>gi|153831669|ref|ZP_01984336.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
 gi|148872179|gb|EDL70996.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
          Length = 265

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           ++ +  I   E ++ S LK    T S  + ++       +GL T R +    +I  + L 
Sbjct: 144 LIATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIRAGQIIDPTNLS 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            P +I +G +V II ++   + ST G+AL     G  I V+N  +G ++
Sbjct: 203 SPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251


>gi|85715051|ref|ZP_01046036.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
 gi|85698248|gb|EAQ36120.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
          Length = 362

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%)

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           G  A S   VVG+ TRR +     +  + L RP ++ R   V +I     + ++  G A 
Sbjct: 235 GRDAASHDHVVGMQTRRQMRAGQALHGADLTRPDLVQRDEAVTLIYQAAGIYLTVRGKAT 294

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              + GDV++V N+ +   VSG VV  G V V
Sbjct: 295 EAGTEGDVVSVLNLQSKRTVSGVVVGRGQVSV 326


>gi|75675313|ref|YP_317734.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
           winogradskyi Nb-255]
 gi|74420183|gb|ABA04382.1| flagellar protein FlgA [Nitrobacter winogradskyi Nb-255]
          Length = 380

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%)

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           GN   S   VVG+ TRR +     +    L RP ++ R   V +I     + ++  G A 
Sbjct: 252 GNNPASRDHVVGMQTRRQMRAGQALHGIDLTRPDLVQRDQAVTLIYQTAGIYLTVRGKAT 311

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              + GDV++V N+ +   +SG VV  G V V
Sbjct: 312 ESGTEGDVVSVLNLQSNRTISGVVVGRGQVSV 343


>gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus
           denitrificans BC]
 gi|317119096|gb|ADV01585.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans BC]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
             G A V +  + +GEVL+E+   E +V  +        + +  VGL+  R L     + 
Sbjct: 122 AFGPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAIVANPQAWVGLIATRPLAAGQALR 181

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            +++  P +   G+ VR+++      ++++G A+S  + G  + V+ +  G +V+G V++
Sbjct: 182 QNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAGAQGQNVRVR-MANGRIVAGIVLE 240

Query: 144 TGTVRVVV 151
            GTV   +
Sbjct: 241 DGTVEAAL 248


>gi|304392505|ref|ZP_07374445.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
           R2A130]
 gi|303295135|gb|EFL89495.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
           R2A130]
          Length = 135

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVT-NSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
             +VP   I  GE +  S L+ ++V      R     + +D +G V    LL    I   
Sbjct: 10  QVLVPVRTIYPGETITASDLRLVEVAAGRERRQGVLRNWEDGIGRVATATLLARRYIVTR 69

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
            L  P+ +  G  VR+   +  +TI T G AL   ++G  IAV++
Sbjct: 70  TLVVPHAVKVGEVVRVTFRRAGLTIETKGQALQSGAVGKAIAVRS 114


>gi|303328379|ref|ZP_07358817.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861709|gb|EFL84645.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 417

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  + +I T+GN+ ++T   AL+D   G  I V+N+ T   +  +V D  TV +
Sbjct: 359 MVRRGTILSLIYTRGNLRMTTQAEALADGEPGATIPVRNLQTKKQIYATVKDGSTVEI 416


>gi|260774932|ref|ZP_05883833.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609187|gb|EEX35345.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +I  V+G  T++ L    VI  + +    V+ R   V I   +  MTI+T G AL+D S 
Sbjct: 163 NIDAVIGAKTKKNLRAGEVIESNDI---CVVCRNETVTIKAVKSGMTITTKGTALTDGSH 219

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           G+ I VKN  +  ++ G V     V V+
Sbjct: 220 GEQIRVKNTKSNRIIEGRVTGISEVTVI 247


>gi|84502380|ref|ZP_01000516.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           batsensis HTCC2597]
 gi|84389192|gb|EAQ01989.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           batsensis HTCC2597]
          Length = 222

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP   +  GE + E  L  +++  + I         D+VG+  +R+L     +    + +
Sbjct: 101 VPVARMLPGERIGEEDLGAVKLPLARIGAFTVTDPADLVGMQVKRLLTQGRPVMTQSVIK 160

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P +I RG ++ I    G + +S  G AL  A  G  I + N+ +   ++G  V  G V V
Sbjct: 161 PLIIDRGDRISIRYDDGLLALSAPGKALDAAHKGQEIRIVNLASNTSLTGVAVGRGIVEV 220


>gi|296534162|ref|ZP_06896655.1| flagella basal body P-ring formation protein FlgA [Roseomonas
           cervicalis ATCC 49957]
 gi|296265508|gb|EFH11640.1| flagella basal body P-ring formation protein FlgA [Roseomonas
           cervicalis ATCC 49957]
          Length = 107

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           V+G    R L     +PLS L   + + R + V+++     ++++T+G AL D ++G  I
Sbjct: 3   VLGRRIGRPLGAGQPVPLSELSAQHAVRRDSVVQLVHEASGLSLTTSGRALEDGALGATI 62

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            + N+  G ++ G V+  G VR +
Sbjct: 63  TILNLSNGAVLLGEVLAPGRVRAL 86


>gi|330826751|ref|YP_004390054.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans K601]
 gi|329312123|gb|AEB86538.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans K601]
          Length = 248

 Score = 40.4 bits (93), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
             G A V +  + +GEVL+E+   E +V  +        + +  VGL+  R L     + 
Sbjct: 122 AFGPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAIVANPQAWVGLIATRPLAAGQALR 181

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            +++  P +   G+ VR+++      ++++G A+S  + G  + V+ +  G +V+G V++
Sbjct: 182 QNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAGAQGQNVRVR-MANGRIVAGIVLE 240

Query: 144 TGTVRVVV 151
            GTV   +
Sbjct: 241 DGTVEAAL 248


>gi|238782788|ref|ZP_04626817.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           bercovieri ATCC 43970]
 gi|238716211|gb|EEQ08194.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           bercovieri ATCC 43970]
          Length = 236

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
            C     F  + V +  + +     H + P V I   ++  ESR   +      +  N  
Sbjct: 94  QCEGQRKFIQIAVYAQGTWWTP--SHPLKPGVTIQPEDL--ESRTGSLARLPEGVVFNKE 149

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
           H    ++GL T R +     +  + L +P VI  G +V +I T     I + G AL +A+
Sbjct: 150 H----IIGLTTTRSINRGQPVLQNQLRQPRVIMTGQEVEMIATGPGFRIRSRGKALDNAA 205

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           +G  + +    TG +++G+V   G V + +K
Sbjct: 206 LGGTLRIIT-KTGQIMTGTVTAEGKVNIDLK 235


>gi|238793994|ref|ZP_04637612.1| Flagella basal body P-ring formation protein flgA [Yersinia
           intermedia ATCC 29909]
 gi|238726626|gb|EEQ18162.1| Flagella basal body P-ring formation protein flgA [Yersinia
           intermedia ATCC 29909]
          Length = 226

 Score = 40.4 bits (93), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 51/83 (61%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R +VI  G +V+++       +++ G A+++A+I D + V
Sbjct: 145 GAVSLRRINAGQPLTRNMLRRLWVIKAGQEVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 204

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V + GT+R+++
Sbjct: 205 R-MASGQIVSGTVGEDGTIRIML 226


>gi|68164554|gb|AAY87283.1| predicted flagellar basal body P-ring biosynthesis protein
           [uncultured bacterium BAC17H8]
          Length = 276

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +GL  R+ L+  H+ P       Y++  G +V I  + G ++I+  G AL +  I + I 
Sbjct: 197 MGLSARKPLMARHLYP------DYLVEEGNEVLITSSSGGISINMVGYALENGQISEWIG 250

Query: 128 VKNIDTGVMVSGSVVDTGTVRVVVK 152
           V+N  +G  +   +     V V+ K
Sbjct: 251 VENASSGKTIRAKITGEKKVTVIAK 275


>gi|95929875|ref|ZP_01312616.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
 gi|95134171|gb|EAT15829.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
          Length = 243

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           +K+VVG +  R +     +    +  P ++ +G+ V+++  +  M ++  GIAL D S G
Sbjct: 156 LKNVVGKLVARNVRAGQPVEFKSVETPPLVHKGSFVKLVARRSGMMLTAIGIALEDGSKG 215

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +VI V+N  +  +V   VV    V V
Sbjct: 216 EVIRVQNNRSKKVVMAQVVGPDLVEV 241


>gi|54307266|ref|YP_128286.1| hypothetical protein PBPRA0029 [Photobacterium profundum SS9]
 gi|46911686|emb|CAG18484.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 44/94 (46%)

Query: 56  IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
           +R  Y  S + + GL +RR ++   +I   ++ +P ++ R   V I    G M  +  G+
Sbjct: 158 LRHGYFTSKQALTGLTSRRKIVAGKIISPRMVEQPKLVQRNDGVLIEAKFGKMNATMKGV 217

Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           AL     GD I V+N+ +   +   +V    VR 
Sbjct: 218 ALESGVKGDSIRVRNLSSQKEIYAIIVGPQKVRT 251


>gi|325982376|ref|YP_004294778.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
           AL212]
 gi|325531895|gb|ADZ26616.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
           AL212]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            +L  PYVI RG  V +++      I + G AL+DA+ G VI V+N  +G +VSG
Sbjct: 184 QMLRAPYVILRGQTVSLVVQGRGFNIQSEGQALADAADGQVIQVRN-KSGRIVSG 237


>gi|197120122|ref|YP_002140549.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           bemidjiensis Bem]
 gi|197089482|gb|ACH40753.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           bemidjiensis Bem]
          Length = 246

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GEVL  S L   +   S  RG Y     +  GL  +  +  +  +    L 
Sbjct: 124 VVAARTLERGEVLLASDLSVAKRDLSLARGGYLKEPDEAAGLRVKATMRANTPVRKDNLE 183

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +  V+  G  V I+     + ++ +G A    + GDVI V+N+ +   ++  VVD  TV+
Sbjct: 184 KVPVVKSGQMVTILAENDVVKVTASGRAKGAGAPGDVITVQNLSSQKEIAARVVDAATVK 243

Query: 149 V 149
           V
Sbjct: 244 V 244


>gi|87306344|ref|ZP_01088491.1| putative flagella basal body P-ring formation protein
           [Blastopirellula marina DSM 3645]
 gi|87290523|gb|EAQ82410.1| putative flagella basal body P-ring formation protein
           [Blastopirellula marina DSM 3645]
          Length = 287

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           H V P   I  GEV+    L    +      G++   I+ +VG    R L     I    
Sbjct: 142 HTVRP---IRRGEVIQAEDLTVQPLNTVRTDGDFETRIESLVGKEAIRSLPAQRPIESGS 198

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
           +  P VI +   V +I   G + I    IA SDAS+GD++ V+ I
Sbjct: 199 IREPVVIQQNDVVTVIAQIGGLVIRRDAIAASDASVGDLLMVQAI 243


>gi|292669969|ref|ZP_06603395.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
           noxia ATCC 43541]
 gi|292648381|gb|EFF66353.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
           noxia ATCC 43541]
          Length = 255

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 41/82 (50%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V  R +  D VI   +L  P V+  G  V ++     + +   G+A+    IG  I V
Sbjct: 173 GRVAGRYIRRDTVITPPMLAMPLVVRAGNAVELVHNANGILVRAEGVAIESGRIGYTIRV 232

Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
           +N  +G ++ G ++D  TV+++
Sbjct: 233 RNARSGKIMRGRIIDAQTVQII 254


>gi|316932822|ref|YP_004107804.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris DX-1]
 gi|315600536|gb|ADU43071.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris DX-1]
          Length = 343

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +++++ A+V+   V  + VI   ++  E R K    ++       A S    +G+  R+ 
Sbjct: 202 AIETVVATVLTRPVQRNEVIKTSDIATERRPKSEVASD-------AASRDGAIGMQARQP 254

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L    ++  + L +P +++R   V +I     + ++  G AL   + GDV+ V N+ +  
Sbjct: 255 LRSGQILRNADLAKPDLVTRDQSVTLIYRTAGIYLTARGKALETGAEGDVVNVLNLQSKR 314

Query: 136 MVSGSVVDTGTVRVVV 151
            ++G+V+  G V +  
Sbjct: 315 TIAGTVIGRGQVSITA 330


>gi|114330357|ref|YP_746579.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
           eutropha C91]
 gi|114307371|gb|ABI58614.1| putative flagella basal body P-ring formation protein [Nitrosomonas
           eutropha C91]
          Length = 231

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LYV     + A+VI HA  P   IN G++++   +   +V    I          VVG
Sbjct: 95  WTLYVPVEIEVIANVI-HAAQP---INMGKLVDTQDIVSKEVDLVRIPAGAVTDPDQVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    L     I    L  PY+I+RG K+R+  T     +ST G AL+ A+ G+V+ ++
Sbjct: 151 KVAVTFLASGQPIRTHQLRAPYIITRGQKIRLTATGAGFAVSTEGEALAAAAEGEVVQIR 210

Query: 130 NIDTGVMVSG 139
           N  TG ++SG
Sbjct: 211 N-HTGRIMSG 219


>gi|123442788|ref|YP_001006765.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089749|emb|CAL12602.1| flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 200

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R ++I  G  V+++       +++ G A+++A+I D + V
Sbjct: 119 GAVSLRPINAGQPLTRNMLRRLWIIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 178

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GTV +++
Sbjct: 179 R-MASGQIVSGTVADDGTVHILL 200


>gi|331645414|ref|ZP_08346518.1| SAF domain protein [Escherichia coli M605]
 gi|331045576|gb|EGI17702.1| SAF domain protein [Escherichia coli M605]
          Length = 252

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           D +G  ++  L P   I    L    ++ R   V I+     +T S  G+AL +   G++
Sbjct: 165 DAIGFSSKHALQPGRPITKEELISAVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEM 224

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+N  +  ++S  V ++G V  V
Sbjct: 225 VKVRNASSQRVISAMVAESGVVTTV 249


>gi|269961593|ref|ZP_06175955.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833634|gb|EEZ87731.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 248

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 28  AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVI 82
           A VP +V    +  GE+++ S +    +     R +   ++  V+G  + R V L D V 
Sbjct: 124 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFSNMDQVIGSKLKRNVRLGDVVE 183

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
              V     V+ R  KV I   +  MTI+T G AL D S GD + VKN  +  ++ G
Sbjct: 184 RNDVC----VVCRNEKVTIKAVKSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 236


>gi|103488384|ref|YP_617945.1| flagellar protein [Sphingopyxis alaskensis RB2256]
 gi|98978461|gb|ABF54612.1| flagellar protein [Sphingopyxis alaskensis RB2256]
          Length = 170

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+ RG  VR+ +   N +IS A IA+ D  +GD IA++  D    +S +V   G  R+
Sbjct: 111 VVRRGDHVRVSIDTPNYSISYAAIAVEDGRVGDSIALRGSDRKSTLSATVTGPGAARI 168


>gi|220903672|ref|YP_002478984.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219867971|gb|ACL48306.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 416

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  V +I ++GN+ I+T   AL+D   G  I V+N+ T   V G V +  TV +
Sbjct: 358 MVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEI 415


>gi|238755328|ref|ZP_04616671.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
           ATCC 29473]
 gi|238706464|gb|EEP98838.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
           ATCC 29473]
 gi|253317691|gb|ACT22780.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           ruckeri]
          Length = 219

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV---VGLVTRRVLLPD 79
            V G  +V +  + AGE L E   KEM      +      ++ D     G +  R +   
Sbjct: 92  QVSGKYLVATRQLAAGEKLTE---KEMTYKEGRLDTLPPGALLDARFAKGTLALRHINAG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +  ++L R +V+  G  V+++       +++ G A+++A++ D + V+ + +G +VSG
Sbjct: 149 QPLTRTMLRRSWVVKAGQAVQVVAEGEGFNVNSEGKAMNNAALQDNVRVRMV-SGQIVSG 207

Query: 140 SVVDTGTVRVVV 151
           +V D G +R+++
Sbjct: 208 TVGDDGVIRIML 219


>gi|212709488|ref|ZP_03317616.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
           30120]
 gi|212687826|gb|EEB47354.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
           30120]
          Length = 223

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G +  R +        S++ RP+ I  G  V +  T  N ++   G A+++A IG+ I V
Sbjct: 141 GTLALRNITAGQTFTNSMVRRPWAIKAGQTVYVFATGDNFSVKYEGRAINNAVIGENIRV 200

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + I+ G +V+G   + G+V V +
Sbjct: 201 RLIN-GQVVNGEAQENGSVHVAL 222


>gi|114762165|ref|ZP_01441633.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
           bermudensis HTCC2601]
 gi|114545189|gb|EAU48192.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           HTCC2601]
          Length = 138

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           ++DV+G   R  L P   +    +  P ++ R   V +I  +  + I T G AL  A  G
Sbjct: 50  LEDVIGQEARVTLYPGRAVMRGAVGAPALVERNQIVELIFARNGLHIVTEGRALDRAGAG 109

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           + + V N+ +   + G+V  +GTV V+
Sbjct: 110 ERVRVMNLSSRSTLFGTVTASGTVSVL 136


>gi|113969600|ref|YP_733393.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. MR-4]
 gi|113884284|gb|ABI38336.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. MR-4]
          Length = 235

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           VV S  +  GE++N S+++   V  +++RG        + G+ V RRV    H  P+   
Sbjct: 116 VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTNQISGVRVKRRVA--KH-FPIFAN 172

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +  +V  +   V I +   N  + T G AL D +IGD I VKN  +   +   V   G V
Sbjct: 173 NLCFVC-KNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEV 231

Query: 148 RV 149
            V
Sbjct: 232 EV 233


>gi|255021350|ref|ZP_05293398.1| Flagellar basal-body P-ring formation protein flgA
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969213|gb|EET26727.1| Flagellar basal-body P-ring formation protein flgA
           [Acidithiobacillus caldus ATCC 51756]
          Length = 226

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 51/115 (44%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + AG VL    L  M    +++ G    S+ +  G   R   +    I  S+L  P  + 
Sbjct: 110 LTAGTVLTAGDLALMPGNAASLAGTPLSSLSEATGRTLRFGTVAGQPITQSMLAAPIWVH 169

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            G  V ++     + I+T   A+ +   G  I V+N+ +G +V G+V    TVRV
Sbjct: 170 GGNNVTLVAEGDGVRITTLAQAIENGHPGQSILVRNLQSGRVVRGTVTAVATVRV 224


>gi|114046832|ref|YP_737382.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. MR-7]
 gi|113888274|gb|ABI42325.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. MR-7]
          Length = 235

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           VV S  +  GE++N S+++   V  +++RG        + G+ V RRV    H  P+   
Sbjct: 116 VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTNQISGVRVKRRVA--KH-FPIFAN 172

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +  +V  +   V I +   N  + T G AL D +IGD I VKN  +   +   V   G V
Sbjct: 173 NLCFVC-KNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEV 231

Query: 148 RV 149
            V
Sbjct: 232 EV 233


>gi|224825773|ref|ZP_03698877.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
 gi|224601997|gb|EEG08176.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
          Length = 240

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 42/86 (48%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
           HS  + VGL +R  L     +   +L    ++ RG  V I+ ++  + ++  G +L    
Sbjct: 152 HSPAEAVGLSSRSALRRGQPLRRKLLEAVVLVRRGDAVEIVASKEAIVVTAPGESLESGR 211

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147
             DVI V+N+ +G ++   V + G V
Sbjct: 212 RNDVIRVRNVGSGKILRARVTEAGRV 237


>gi|91792658|ref|YP_562309.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           denitrificans OS217]
 gi|91714660|gb|ABE54586.1| Flageller protein FlgA [Shewanella denitrificans OS217]
          Length = 235

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV   V++ G ++    L    V   ++RG +   I+ ++G   +R +  D  I    L 
Sbjct: 116 VVADNVLSPGALITRDSLNIAFVDQYSLRGQFFTEIEQIIGSRVKRRVAKDAPILSGNL- 174

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +G  V I     N+ I T+G AL+D + GD I VKN  +   +   V   G V 
Sbjct: 175 --CFVCKGDPVSIFARTENIVIKTSGEALNDGNEGDTIRVKNSISNRELDAQVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|149908763|ref|ZP_01897424.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
           PE36]
 gi|149808305|gb|EDM68244.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
           PE36]
          Length = 269

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 54/116 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN  ++L +  ++  +   S     +  S + +V    +R +    +I  S L +  ++ 
Sbjct: 153 INPNQILKKQNIQLQRGVISRHTQRFITSSQQLVNQRAKRRIRSGKIILPSQLQQRLLVE 212

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           R  +V I    G+  +S  G AL +  +GD I +KN+ +G  +   ++ +G V  +
Sbjct: 213 RNDEVIIRAGSGSFVVSMKGKALQNGQLGDKIYIKNLSSGKKIQAKIIASGVVETL 268


>gi|260767775|ref|ZP_05876710.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260617284|gb|EEX42468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|315179393|gb|ADT86307.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           furnissii NCTC 11218]
          Length = 218

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+ R   V I      M+I+T G ALSD ++GD I VKN  +  ++ G V   G V V
Sbjct: 159 VVCRNESVMIRAISAGMSITTKGTALSDGTLGDQIKVKNDKSNRIIDGKVSGIGEVTV 216


>gi|269965430|ref|ZP_06179549.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
 gi|269829909|gb|EEZ84139.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
          Length = 266

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   S   VVG  + R V L D V    V 
Sbjct: 143 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVGAKLKRNVRLGDVVERNDVC 202

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I      MTI+T G AL D S GD + VKN  +  ++   V D   +
Sbjct: 203 ----VVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEXIVTDIAEI 258

Query: 148 RV 149
            V
Sbjct: 259 TV 260


>gi|238751758|ref|ZP_04613246.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
           ATCC 43380]
 gi|238710029|gb|EEQ02259.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
           ATCC 43380]
          Length = 224

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R +VI  G  V+++       +++ G A+++A+I D + V
Sbjct: 143 GAVSLRQINAGQPLTRNMLRRQWVIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 202

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG++ + G +R+++
Sbjct: 203 R-MASGQIVSGTLAEDGIIRIIL 224


>gi|34496454|ref|NP_900669.1| flagella basal body P-ring formation protein flgA [Chromobacterium
           violaceum ATCC 12472]
 gi|34102307|gb|AAQ58673.1| probable flagella basal body P-ring formation protein flgA
           [Chromobacterium violaceum ATCC 12472]
          Length = 221

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 37  AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
           AGE ++   ++ + ++N  + GN        VG V R        +   ++  PY++   
Sbjct: 108 AGETISGGDVRLVDISNPALAGNVLTDASQAVGQVLRSGAPAGAWVRNFMVRAPYLVRSN 167

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +V++       +    G AL +A+ GD I+V+ + TG +V G V   G+V VV
Sbjct: 168 QRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR-LSTGRVVLGVVQADGSVAVV 220


>gi|187478181|ref|YP_786205.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           avium 197N]
 gi|115422767|emb|CAJ49295.1| flagella basal body P-ring formation protein [Bordetella avium
           197N]
          Length = 249

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +V G   V S  I AG+ +    L   +    N+        + +VG+  R  +     I
Sbjct: 122 NVPGIYYVASRQIPAGQAITSEDLDSREGDLMNLPPGAMTDARSIVGMQARHRINIGQPI 181

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S L     ISRG  VRII       +S+ G AL D + G  I V+   +G +VSG + 
Sbjct: 182 RGSALRDAASISRGQNVRIIARGNGFVVSSEGQALEDGAPGATIQVRT-QSGQVVSGVLQ 240

Query: 143 DTGTVRV 149
             G V +
Sbjct: 241 PGGQVEL 247


>gi|148266115|ref|YP_001232821.1| SAF domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146399615|gb|ABQ28248.1| SAF domain protein [Geobacter uraniireducens Rf4]
          Length = 238

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 54/112 (48%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GEV+    +   +   + ++G    + ++ VG   R  +  ++ I    L +  ++  G 
Sbjct: 125 GEVIGNGDIAVQKRDLAKMQGKTCRTAEEAVGKRVRTAIRGNNPIRADYLEKISLVKSGQ 184

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            V I++    + I+ AG A +  + GD + V+N+ +   V+  VVD  TV+V
Sbjct: 185 LVTIVVENDALRITAAGRARNSGAEGDTVMVQNLASQKEVAARVVDATTVKV 236


>gi|119469944|ref|ZP_01612749.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Alteromonadales bacterium TW-7]
 gi|119446654|gb|EAW27927.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Alteromonadales bacterium TW-7]
          Length = 235

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 5/116 (4%)

Query: 35  INAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
           I  GEV+  + +  EM+ T+  +R  Y    K ++G  ++R +     +P+ +L++  ++
Sbjct: 122 IARGEVITSAHITVEMKPTHF-VRVQYQDDPKALIGSRSKRNIR--EGMPI-LLNQICMV 177

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +G  + I  +   + I T G+AL D ++G+ I V+N  TG +++  V    +V+V
Sbjct: 178 CKGDAINIYASTKGLQIKTTGVALEDGTLGEQILVENKKTGKVLNARVDGVESVQV 233


>gi|261253620|ref|ZP_05946193.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           orientalis CIP 102891]
 gi|260937011|gb|EEX93000.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           orientalis CIP 102891]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G  V  +  I+ G++++E  +    V     R     SI  V+G   ++ L    VI   
Sbjct: 126 GPQVTLTSPISRGQLISEYDVTISMVDLQRFRRQGFTSIDAVIGAKAKKNLRAGEVIEDR 185

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
            +    V+ R   V I   +  MTI+T G+AL+D S G+ I VKN  +  ++ G V
Sbjct: 186 DI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVKNSKSNRIIEGRV 238


>gi|323495383|ref|ZP_08100460.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
 gi|323310306|gb|EGA63493.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
          Length = 248

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           V+ R   V I   +  MTI+T G+AL+D S G+ I VKN  +  ++ G V     V V+
Sbjct: 189 VVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVKNSKSNRIIEGRVTGISEVTVI 247


>gi|167576658|ref|ZP_02369532.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis TXDOH]
          Length = 253

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 158 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 217

Query: 126 IAVK 129
           I V+
Sbjct: 218 IRVR 221


>gi|238788311|ref|ZP_04632105.1| Flagella basal body P-ring formation protein flgA [Yersinia
           frederiksenii ATCC 33641]
 gi|238723557|gb|EEQ15203.1| Flagella basal body P-ring formation protein flgA [Yersinia
           frederiksenii ATCC 33641]
          Length = 226

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R +VI  G  V+++       +++ G A+++ ++ D + V
Sbjct: 145 GAVSLRQINAGQPLTRNMLRRLWVIKAGQDVQVLAQGEGFNVNSNGKAMNNGAVQDNVRV 204

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V + GT+R+++
Sbjct: 205 R-MASGQIVSGTVAEDGTIRIML 226


>gi|71280005|ref|YP_268215.1| putative flagellar basal-body P-ring formation protein FlgA
           [Colwellia psychrerythraea 34H]
 gi|71145745|gb|AAZ26218.1| putative flagellar basal-body P-ring formation protein FlgA
           [Colwellia psychrerythraea 34H]
          Length = 230

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I+ G+ L+ES ++   +  + IRGN       V G   ++ +     I    +    +I 
Sbjct: 117 ISKGDKLDESNVELAFIAINKIRGNKLTDTNIVFGAKAKKRIAKGRAISKRSI---CLIC 173

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +G  V II++  N +I T G+ALS  +I + I VKN  +  +++  V
Sbjct: 174 KGDVVTIIVSSDNFSIKTQGVALSSGNINEQIRVKNTRSKKVITPRV 220


>gi|309388847|gb|ADO76727.1| flagella basal body P-ring formation protein FlgA [Halanaerobium
           praevalens DSM 2228]
          Length = 323

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%)

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            V+  S L  PYV+  G K+ + +   N+ IST   A     IGD+I V+N+ TG     
Sbjct: 251 EVLNKSYLKIPYVVKWGQKLNLRVKVNNIKISTLVKAKERGKIGDIIKVENLRTGYDFQV 310

Query: 140 SVVDTGTVRVV 150
            V+    V+++
Sbjct: 311 LVISPTEVKLI 321


>gi|260767919|ref|ZP_05876853.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260615949|gb|EEX41134.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
          Length = 233

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 36/67 (53%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +  GL   R L    ++  +++ +P ++ +G +V II  +  +  ST G+AL D   G
Sbjct: 146 IDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRG 205

Query: 124 DVIAVKN 130
           D I V+N
Sbjct: 206 DQIEVQN 212


>gi|90579902|ref|ZP_01235710.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
 gi|90438787|gb|EAS63970.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
          Length = 235

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVIPLSVL 87
           VV SV +  G V+   +L    V +   RGN      +++G  V R V L + +    + 
Sbjct: 116 VVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIGSKVKRSVKLGEMIQARDIC 175

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               ++ R   V I    G + I T G ALSD +IG+ I V+N  +  M+   +   G V
Sbjct: 176 ----LVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQNKTSRRMIDAIITAVGEV 231

Query: 148 RV 149
            V
Sbjct: 232 TV 233


>gi|254230144|ref|ZP_04923539.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|151937337|gb|EDN56200.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   +   VVG  + R V L D V    V 
Sbjct: 143 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVGAKLKRNVRLGDVVERNDVC 202

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I      MTI+T G AL D + GD + VKN  +  ++ G V  TG  
Sbjct: 203 ----VVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVKNDKSQRIIEGIV--TGIA 256

Query: 148 RVVV 151
            + V
Sbjct: 257 EITV 260


>gi|92116935|ref|YP_576664.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
           hamburgensis X14]
 gi|91799829|gb|ABE62204.1| flagellar protein FlgA [Nitrobacter hamburgensis X14]
          Length = 373

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 44/92 (47%)

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           GN A +   V+G+  RR +     +  + L +P ++ R   V +I     + ++  G A 
Sbjct: 239 GNDAANRDHVIGMQARRQMRAGQALRRADLTKPDLVQRDQAVTLIYQAAGIYLTVRGKAT 298

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              + GDV++  N+ +   VSG VV  G V V
Sbjct: 299 ESGTEGDVVSALNLQSKRTVSGVVVGRGQVSV 330


>gi|24374764|ref|NP_718807.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           oneidensis MR-1]
 gi|24349430|gb|AAN56251.1|AE015762_8 flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella oneidensis MR-1]
          Length = 235

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 6   FLLFFSLYVLSLDSLFASVIG-HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           + +F S+ V   D LF  V+    + P      GE+++ ++++   V  +++RG     I
Sbjct: 101 WQIFISVRV---DILFPVVVATEPLAP------GELISPTQVEIRYVDQNSLRGMQFSDI 151

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
             + G+  +R +  ++  P+   +  +V    A V I +   N  + T G AL D +IGD
Sbjct: 152 NQLSGVRVKRRVAKNN--PIFANNLCFVCKNDA-VSIYVRSSNFVLKTVGEALQDGNIGD 208

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
            I VKN  +   +  +V   G V V
Sbjct: 209 QIRVKNSSSNKELDATVTAIGEVEV 233


>gi|83858807|ref|ZP_00952329.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853630|gb|EAP91482.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 315

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 50/116 (43%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+ +  + +  +++  + +RG    +   +VG+  RR L  D  +    +  P V+ 
Sbjct: 189 IARGDTITAADVDWVRLPENQVRGEIILAETGLVGMTARRALTADRPVRSYDVEPPVVVE 248

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           RG  V ++   G +T+S    AL +   G  I   N+ +   V   V   G   V+
Sbjct: 249 RGELVSLVYQVGPLTLSAQARALENGGEGQFIRFVNLQSNRTVEAWVEGPGRASVL 304


>gi|22126394|ref|NP_669817.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis KIM 10]
 gi|45441413|ref|NP_992952.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis biovar Microtus str. 91001]
 gi|162419453|ref|YP_001606469.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Angola]
 gi|165926043|ref|ZP_02221875.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938691|ref|ZP_02227246.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010841|ref|ZP_02231739.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166210809|ref|ZP_02236844.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167401018|ref|ZP_02306521.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420243|ref|ZP_02311996.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425844|ref|ZP_02317597.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469716|ref|ZP_02334420.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           FV-1]
 gi|270486649|ref|ZP_06203723.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|294504034|ref|YP_003568096.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           Z176003]
 gi|21959381|gb|AAM86068.1|AE013854_4 putative flagella basal body P-ring formation protein [Yersinia
           pestis KIM 10]
 gi|45436274|gb|AAS61829.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162352268|gb|ABX86216.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Angola]
 gi|165913305|gb|EDR31927.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922247|gb|EDR39424.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990185|gb|EDR42486.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207989|gb|EDR52469.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961938|gb|EDR57959.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049407|gb|EDR60815.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055243|gb|EDR65040.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|262361780|gb|ACY58501.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           D106004]
 gi|262366084|gb|ACY62641.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           D182038]
 gi|270335153|gb|EFA45930.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|294354493|gb|ADE64834.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           Z176003]
          Length = 254

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 173 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 232

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 233 R-MPSGQIVSGTVADDGTIRIML 254


>gi|259417444|ref|ZP_05741363.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
           TrichCH4B]
 gi|259346350|gb|EEW58164.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
           TrichCH4B]
          Length = 138

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)

Query: 20  LFA-SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           LFA S +   +VP   I A E++     +++   N    G  + S  +++G   R  L  
Sbjct: 11  LFAQSALADILVPVRTIRAKEIIAA---EDLVFKNVEAPGALS-SPNEIIGQEARVALYA 66

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              I    +  P ++ R   V++I   G + IST G +L   + G++I V N+ +   V+
Sbjct: 67  SRPIHAGDIGPPALVDRNDLVKLIFRHGGLEISTEGRSLGRGAEGELIRVMNLSSRTTVT 126

Query: 139 GSVVDTGTVRV 149
           G +   G + V
Sbjct: 127 GRIRADGNIEV 137


>gi|89075488|ref|ZP_01161899.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           sp. SKA34]
 gi|89048760|gb|EAR54331.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           sp. SKA34]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVIPLSVL 87
           VV SV +  G V+   +L    V +   RGN      +++G  V R V L + +    + 
Sbjct: 116 VVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIGSKVKRSVKLGEMIQARDIC 175

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               ++ R   V I    G + I T G ALSD +IG+ I V+N  +  M+   +   G V
Sbjct: 176 ----LVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQNRTSRRMIDAIITAVGEV 231

Query: 148 RV 149
            V
Sbjct: 232 TV 233


>gi|254504988|ref|ZP_05117139.1| SAF domain family [Labrenzia alexandrii DFL-11]
 gi|222441059|gb|EEE47738.1| SAF domain family [Labrenzia alexandrii DFL-11]
          Length = 326

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 39/80 (48%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           ++VG   R  L P   +       P ++ RG KV +    G M +++   AL++ + GDV
Sbjct: 228 NIVGKAARVNLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTNGAKGDV 287

Query: 126 IAVKNIDTGVMVSGSVVDTG 145
           I V N+ +  +V  +V   G
Sbjct: 288 IDVMNLQSRRVVPATVTSRG 307


>gi|254508440|ref|ZP_05120560.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 16]
 gi|219548650|gb|EED25655.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 16]
          Length = 248

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           V+G  T++ L    VI  + +    V+ R   V I   +  M I+T G+AL+D S G+ I
Sbjct: 167 VIGAKTKKNLRSGEVIEENDI---CVVCRNETVTIKAVKSGMVITTKGVALTDGSHGEQI 223

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            VKN  +  ++ G V     V VV
Sbjct: 224 RVKNSKSNRIIEGRVTGISEVTVV 247


>gi|21113068|gb|AAM41243.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573877|gb|AAY49287.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 281

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L  P ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 197 AVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 256

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 257 SVENSSSRRVVQGIVEASGTV 277


>gi|221639445|ref|YP_002525707.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides KD131]
 gi|221160226|gb|ACM01206.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides KD131]
          Length = 220

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           V L   + +LP H+ P       ++++RG  V + +  G + +     AL D ++GD++ 
Sbjct: 140 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 193

Query: 128 VKNIDTGVMVSGSV 141
           V+N+ +G ++  +V
Sbjct: 194 VRNLSSGAILRATV 207


>gi|26991083|ref|NP_746508.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida KT2440]
 gi|24986118|gb|AAN69972.1|AE016635_8 flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida KT2440]
          Length = 225

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           +   +   VG+   R  + D V+    L +  V+ +G +V II   G++++   G ALS 
Sbjct: 134 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 193

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             + + I V+N+++  +V   V   G V V
Sbjct: 194 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 223


>gi|148546700|ref|YP_001266802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida F1]
 gi|148510758|gb|ABQ77618.1| SAF domain protein [Pseudomonas putida F1]
          Length = 250

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           +   +   VG+   R  + D V+    L +  V+ +G +V II   G++++   G ALS 
Sbjct: 159 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 218

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             + + I V+N+++  +V   V   G V V
Sbjct: 219 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 248


>gi|313497755|gb|ADR59121.1| FlgA [Pseudomonas putida BIRD-1]
          Length = 240

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           +   +   VG+   R  + D V+    L +  V+ +G +V II   G++++   G ALS 
Sbjct: 149 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 208

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             + + I V+N+++  +V   V   G V V
Sbjct: 209 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 238


>gi|330445342|ref|ZP_08308994.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489533|dbj|GAA03491.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +V +  G VL   +L    + +   RG+     ++++G   +R +    ++    + 
Sbjct: 116 VVAAVALGRGMVLTPDKLSVQMIESRFQRGSSFDDPREIIGSKVKRSVKAGEMVQARDI- 174

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              ++ R   V I    G + I T G ALSD +IGD I V+N  +  M+   +   G V 
Sbjct: 175 --CLVCRNDSVIIRAGTGGLNIVTKGKALSDGAIGDEIRVQNTKSRRMIDAIITAVGEVT 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|108807169|ref|YP_651085.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Antiqua]
 gi|108812487|ref|YP_648254.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Nepal516]
 gi|145598614|ref|YP_001162690.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Pestoides F]
 gi|108776135|gb|ABG18654.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|108779082|gb|ABG13140.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Antiqua]
 gi|145210310|gb|ABP39717.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides F]
          Length = 251

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 170 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 229

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 230 R-MPSGQIVSGTVADDGTIRIML 251


>gi|186895110|ref|YP_001872222.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
 gi|186698136|gb|ACC88765.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
          Length = 259

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 178 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 237

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 238 R-MPSGQIVSGTVADDGTIRIML 259


>gi|149366255|ref|ZP_01888290.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CA88-4125]
 gi|218928918|ref|YP_002346793.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis CO92]
 gi|229896238|ref|ZP_04511408.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides A]
 gi|229897173|ref|ZP_04512329.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229897899|ref|ZP_04513050.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229902869|ref|ZP_04517986.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|115347529|emb|CAL20438.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CO92]
 gi|149292668|gb|EDM42742.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CA88-4125]
 gi|229680316|gb|EEO76415.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|229688940|gb|EEO81005.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229693510|gb|EEO83559.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229701161|gb|EEO89190.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides A]
 gi|320015471|gb|ADV99042.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 232

 Score = 38.1 bits (87), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232


>gi|323492342|ref|ZP_08097495.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
 gi|323313389|gb|EGA66500.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
          Length = 216

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L TRR+     +I    L  P ++++G +V I   +G  + +T G+AL   + G  I V+
Sbjct: 136 LATRRIR-SGQIIDGRKLQTPALVAKGNQVIISAGKGGFSATTKGVALEQGAHGQQIEVR 194

Query: 130 NIDTGVMV 137
           NI +G +V
Sbjct: 195 NISSGKVV 202


>gi|170024651|ref|YP_001721156.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|169751185|gb|ACA68703.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis YPIII]
          Length = 269

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 188 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 247

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 248 R-MPSGQIVSGTVADDGTIRIML 269


>gi|167034950|ref|YP_001670181.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida GB-1]
 gi|166861438|gb|ABY99845.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida GB-1]
          Length = 250

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 44/91 (48%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
            +   +   VG+   R  + D V+    L +  V+ +G +V II   G++++   G ALS
Sbjct: 158 GFLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALS 217

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              + + I V+N+++  +V   V   G V V
Sbjct: 218 KGGLSEQIRVRNLNSKRVVKARVTGPGQVEV 248


>gi|77359715|ref|YP_339290.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874626|emb|CAI85847.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Pseudoalteromonas haloplanktis TAC125]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VV +V +  GEV+  + L  EM+ T+  IR  Y  +   ++G  ++R +     +PL +L
Sbjct: 116 VVANVNLARGEVITAAHLSIEMRSTHF-IRVQYLDNPALLIGSRSKRNIRSG--MPL-LL 171

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +  ++ +G  V I      + + T GIAL D S+G+ + VKN  TG +++  V    +V
Sbjct: 172 SQICMVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVKNKKTGKVLNARVDGVESV 231

Query: 148 RV 149
           +V
Sbjct: 232 QV 233


>gi|242278485|ref|YP_002990614.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           salexigens DSM 2638]
 gi|242121379|gb|ACS79075.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           salexigens DSM 2638]
          Length = 334

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           VI+RG KV ++    N+ ++    AL DA +G  I V+N+ +   V  +VV+  TV+V
Sbjct: 276 VIARGDKVTLMFRGKNLKLTVPVEALEDAGVGQNITVRNLQSKRKVVATVVNAQTVQV 333


>gi|332533181|ref|ZP_08409050.1| flagellar basal-body P-ring formation protein FlgA
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037463|gb|EGI73917.1| flagellar basal-body P-ring formation protein FlgA
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VV +  +  GEV+ +S L  EM+ T+  +R  Y      ++G  ++R +     +P+ +L
Sbjct: 116 VVATANLTRGEVITKSHLSIEMKPTHF-VRIQYLDDPTMLIGSRSKRNIRSG--MPV-LL 171

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           ++  ++ +G  V I      + I T GIAL D ++G+ I +KN  +G +++  V    +V
Sbjct: 172 NQICMVCKGDSVNIYANLRGLRIKTTGIALEDGTLGEQIQIKNKKSGKVLNARVDGVESV 231

Query: 148 RV 149
           +V
Sbjct: 232 QV 233


>gi|262394945|ref|YP_003286799.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
 gi|262338539|gb|ACY52334.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
          Length = 248

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           +V +  +  GE+++ S +    +     R +   +   VVG  + R V L D V    V 
Sbjct: 129 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVGAKLKRNVRLGDVVERNDVC 188

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               V+ R  KV I      MTI+T G AL D + GD + VKN  +  ++ G V  TG  
Sbjct: 189 ----VVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVKNDKSQRIIEGIV--TGIA 242

Query: 148 RVVV 151
            + V
Sbjct: 243 EITV 246


>gi|51596007|ref|YP_070198.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
 gi|51589289|emb|CAH20910.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
          Length = 232

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232


>gi|152995098|ref|YP_001339933.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Marinomonas sp. MWYL1]
 gi|150836022|gb|ABR69998.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Marinomonas sp. MWYL1]
          Length = 230

 Score = 37.7 bits (86), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 52/108 (48%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+ +++S     +V  S++RG+         GL+  R L  +  I   + ++P ++ 
Sbjct: 114 INRGQAISKSNTDVGEVDISSLRGHVYTKKNPPYGLIASRNLRINTFITDDLTNQPTLVK 173

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
           +G  V I  + G + +   G+AL +   G  I VKN  +  ++   VV
Sbjct: 174 KGDSVLITASSGTIIVRMNGVALENGIKGQQIRVKNTSSERIIYAKVV 221


>gi|325274808|ref|ZP_08140835.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           sp. TJI-51]
 gi|324100053|gb|EGB97872.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           sp. TJI-51]
          Length = 240

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 44/91 (48%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
            +   +   VG+   R  + D V+    L +  V+ +G +V I+   G++++   G ALS
Sbjct: 148 GFLSELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIVARSGSLSVRMPGEALS 207

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              + + I V+N+++  +V   V   G V V
Sbjct: 208 KGGLSEQIRVRNLNSKRVVKARVTGPGQVEV 238


>gi|83717277|ref|YP_438385.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
 gi|83651102|gb|ABC35166.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
          Length = 257

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 162 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDV 221

Query: 126 IAVK 129
           I ++
Sbjct: 222 IRLR 225


>gi|153947896|ref|YP_001401294.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959391|gb|ABS46852.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
          Length = 232

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V++R +     +  ++L R +++  G  V ++       +++ G A+++ +  + I V
Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D GT+R+++
Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232


>gi|77747859|ref|NP_637319.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|77761201|ref|YP_243307.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188991646|ref|YP_001903656.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167733406|emb|CAP51607.1| Flagella basal body P-ring formation protein flgA precursor
           [Xanthomonas campestris pv. campestris]
          Length = 214

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L  P ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|218778845|ref|YP_002430163.1| flagella basal body P-ring formation protein FlgA
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760229|gb|ACL02695.1| Flagella basal body P-ring formation protein FlgA
           [Desulfatibacillum alkenivorans AK-01]
          Length = 324

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 34  VINAG----EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V+ AG    E+ N SRL +  VT+           K+V G+  R+ +     +   +L +
Sbjct: 213 VLTAGDVTVEMRNLSRLPDGVVTDP----------KEVRGMRLRQDMDAGEHMLSRMLEK 262

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P ++ RG  V I+   G ++I+  G+A     +GD I V+N  +  +++  V  TG  +V
Sbjct: 263 PPLVERGEDVTIMAENGVLSITAIGLAKESGGLGDAIEVENKMSEKIITCRV--TGPAQV 320

Query: 150 VVK 152
            V+
Sbjct: 321 EVR 323


>gi|218887605|ref|YP_002436926.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758559|gb|ACL09458.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 346

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 12/134 (8%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH---SIKDVVGLVTR-- 73
           S F  V       +  +N  +VL   ++       + +R N A+      D +G   R  
Sbjct: 217 SAFVDVWADVPCAAQPVNKDDVLTPEKI-------TRVRKNLAYLREPAWDGLGGPWRLT 269

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           R +  D VI  S L     + RG+ V ++   G++ +   G A++D  +G+ I V+N+ +
Sbjct: 270 RPVGADQVIYQSDLSGVPTVRRGSVVTVLYDSGSVRLQVQGEAMADGGLGETIPVRNMQS 329

Query: 134 GVMVSGSVVDTGTV 147
              +  +V D GTV
Sbjct: 330 KRQIYAAVKDGGTV 343


>gi|116626489|ref|YP_828645.1| SAF domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229651|gb|ABJ88360.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
          Length = 285

 Score = 37.7 bits (86), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 11/126 (8%)

Query: 29  VVPSVVINAGEVLNESRLK-----EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           VV +  + AG  ++ +RL+     E+  T       Y  +I++  G V RR +     + 
Sbjct: 161 VVATEALQAGRPIDPARLRVESREELPATG------YLAAIEETAGKVPRRSIAAGTPLR 214

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              L    V+  G  V++ +  G   +   G+A++  ++GD + V N D+       V  
Sbjct: 215 AQWLEAARVVMSGDTVQVEIINGGAHLVLDGVAVTSGAVGDTVLVLNPDSKKQFRARVTA 274

Query: 144 TGTVRV 149
            G VRV
Sbjct: 275 AGKVRV 280


>gi|167614833|ref|ZP_02383468.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis Bt4]
 gi|257141418|ref|ZP_05589680.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
          Length = 248

 Score = 37.7 bits (86), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 153 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDV 212

Query: 126 IAVK 129
           I ++
Sbjct: 213 IRLR 216


>gi|170722898|ref|YP_001750586.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida W619]
 gi|169760901|gb|ACA74217.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida W619]
          Length = 250

 Score = 37.7 bits (86), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           +   +   VG+   R  + D V+    L +  VI +G  V II   G++ +   G ALS 
Sbjct: 159 FLTDLDQAVGMKMLRPTVIDQVLTPQHLEQAEVIRKGDHVVIIARSGSLAVRMPGEALSK 218

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
              G+ I V+N+++  +V   V   G V V +
Sbjct: 219 GGQGEQIRVRNLNSQRVVKARVTAPGQVEVAM 250


>gi|77463603|ref|YP_353107.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388021|gb|ABA79206.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
          Length = 222

 Score = 37.7 bits (86), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           V L   + +LP H+ P       ++++RG  V + +  G + +     AL D ++GD++ 
Sbjct: 142 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 195

Query: 128 VKNIDTGVMVSGSV 141
           V+N+ +G  +  +V
Sbjct: 196 VRNLSSGATLRATV 209


>gi|56551515|ref|YP_162354.1| hypothetical protein ZMO0619 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761159|ref|ZP_04759248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|4378864|gb|AAD19732.1| flagellar protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543089|gb|AAV89243.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374778|gb|EER64239.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 188

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  V ++    + T+S  GIA  D ++GD I VK+  +   V   VV++G VR+
Sbjct: 127 LVKRGDPVELVAGNNSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184


>gi|126462435|ref|YP_001043549.1| SAF domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126104099|gb|ABN76777.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
          Length = 220

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           V L   + +LP H+ P       ++++RG  V + +  G + +     AL D ++GD++ 
Sbjct: 140 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 193

Query: 128 VKNIDTGVMVSGSV 141
           V+N+ +G  +  +V
Sbjct: 194 VRNLSSGATLRATV 207


>gi|332558459|ref|ZP_08412781.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332276171|gb|EGJ21486.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 222

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           V L   + +LP H+ P       ++++RG  V + +  G + +     AL D ++GD++ 
Sbjct: 142 VALAAGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 195

Query: 128 VKNIDTGVMVSGSV 141
           V+N+ +G  +  +V
Sbjct: 196 VRNLSSGATLRATV 209


>gi|260752880|ref|YP_003225773.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552243|gb|ACV75189.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 188

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  V ++    + T+S  GIA  D ++GD I VK+  +   V   VV++G VR+
Sbjct: 127 LVKRGDPVELVAGNSSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184


>gi|167905086|ref|ZP_02492291.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei NCTC 13177]
          Length = 233

 Score = 37.4 bits (85), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197

Query: 126 IAVK 129
           I ++
Sbjct: 198 IRLR 201


>gi|114570498|ref|YP_757178.1| flagellar basal body P-ring biosynthesis protein FlgA [Maricaulis
           maris MCS10]
 gi|114340960|gb|ABI66240.1| flagellar protein FlgA [Maricaulis maris MCS10]
          Length = 314

 Score = 37.4 bits (85), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 53/115 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + +G+ +  S +  +   +  +R +     + ++G+ TRR L P+  +    L RP ++ 
Sbjct: 192 VASGQEITASDITWISHRSDRLRPDAILDPEALIGMETRRALRPNEPLRGYDLQRPLMVE 251

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           RG  V ++     + ++    A+ DA+ G+V    N+ +   V   V   G  RV
Sbjct: 252 RGDLVVLMFEVPGIQLTVRARAMEDAADGEVARFINLQSNRTVEALVDGPGRARV 306


>gi|254459586|ref|ZP_05073002.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium HTCC2083]
 gi|206676175|gb|EDZ40662.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 245

 Score = 37.4 bits (85), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            AV   + +N G+ L  S ++   +   +    YA S   VVG V  + L P   +    
Sbjct: 118 EAVYLKLPMNKGDRLKLSDVELRPIERLSSESVYA-SPDQVVGRVLGQSLTPSIAVMPRH 176

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L R + +     + I + +G + + + G+AL    +GD I V+N+ +  ++ G ++    
Sbjct: 177 LAREWSVQEEDILSIYIVRGGIEVVSTGVALQPGQLGDTIHVENLSSETVLIGRIIGEKK 236

Query: 147 VRVVVK 152
           V ++ K
Sbjct: 237 VEIIAK 242


>gi|134280881|ref|ZP_01767591.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
 gi|134247903|gb|EBA47987.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
          Length = 233

 Score = 37.4 bits (85), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197

Query: 126 IAVK 129
           I ++
Sbjct: 198 IRLR 201


>gi|254299690|ref|ZP_04967139.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
 gi|157809683|gb|EDO86853.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
          Length = 233

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DV
Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197

Query: 126 IAVK 129
           I ++
Sbjct: 198 IRLR 201


>gi|170742324|ref|YP_001770979.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
 gi|168196598|gb|ACA18545.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
          Length = 347

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VG V +R L P   +  + L RP ++ RG  V I+     ++++  G+A     +G  +
Sbjct: 248 LVGQVAQRALAPGQPLRSADLARPDLVQRGEAVTILYEGPGVSLALGGLAREGGPLGATV 307

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
           +V N  +  ++ G+VV  G V V
Sbjct: 308 SVVNPVSKKVLQGTVVGPGRVSV 330


>gi|269103194|ref|ZP_06155891.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163092|gb|EEZ41588.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 231

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87
           VV SV +  G VL+++ L    + +   RG    S + + G  V R V + + V    + 
Sbjct: 112 VVASVPLGRGMVLSQNNLTVALIESRFQRGAIYQSPQALFGAKVKRNVKIGEAVQANDIC 171

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               ++ R  KV I   Q  + I T G ALSD ++G+ I VKN  +  ++S  V   G V
Sbjct: 172 ----MVCRNDKVVISAGQPGLKIITQGTALSDGTLGEQIRVKNNRSNKIISAQVSAVGEV 227

Query: 148 RV 149
            V
Sbjct: 228 DV 229


>gi|323498426|ref|ZP_08103422.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           sinaloensis DSM 21326]
 gi|323316499|gb|EGA69514.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           sinaloensis DSM 21326]
          Length = 248

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +I  V+G  T++ L    +I  + +    V+ R   V I   +  M I+T G+A++D S 
Sbjct: 163 TIDAVIGAKTKKNLRSGEIIEENDI---CVVCRNETVTIKAVKSGMVITTKGVAMTDGSH 219

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           G+ I VKN  +  ++ G V     V VV
Sbjct: 220 GEQIRVKNSKSNRIIEGRVTGISEVTVV 247


>gi|254470124|ref|ZP_05083528.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
 gi|211960435|gb|EEA95631.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
          Length = 322

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           ++ G ++  + +++ +   S   G    +  D++G+  RR +     I    +  P ++ 
Sbjct: 194 LDRGAIITANDVRQERKPASRYAGREFLAAADLIGMEVRRNMRSGSTITPRDVSTPVLVK 253

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
           RGAKV ++     M IST G A S+    D+I + N
Sbjct: 254 RGAKVTVLYKIPGMNISTQGKAKSEGGKNDLIEILN 289


>gi|149189832|ref|ZP_01868112.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
 gi|148836318|gb|EDL53275.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 36/72 (50%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
           ++   +  ++G    R +    +I  S + +P ++ +G +V II  +G    ST GIAL 
Sbjct: 148 HFVADLSQIIGNQVSRRMRTGQIIDASFVVKPPLVEKGNEVVIIAAKGKFNASTKGIALE 207

Query: 119 DASIGDVIAVKN 130
               G+ I V+N
Sbjct: 208 TGGAGEQIEVQN 219


>gi|170288993|ref|YP_001739231.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
           RQ2]
 gi|170176496|gb|ACB09548.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
           RQ2]
          Length = 286

 Score = 37.4 bits (85), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 51/107 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   ++  P  + 
Sbjct: 167 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V
Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRV 273


>gi|194365685|ref|YP_002028295.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Stenotrophomonas maltophilia R551-3]
 gi|194348489|gb|ACF51612.1| flagella basal body P-ring formation protein FlgA [Stenotrophomonas
           maltophilia R551-3]
          Length = 218

 Score = 37.4 bits (85), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  GE L  + +   Q   + I G         +G + RR L    ++  + L    +I 
Sbjct: 102 IGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +V G+V   G V
Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214


>gi|298529925|ref|ZP_07017327.1| flagella basal body P-ring formation protein FlgA
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509299|gb|EFI33203.1| flagella basal body P-ring formation protein FlgA
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 327

 Score = 37.4 bits (85), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           ++SRGAKV ++    ++T+   G  L D   GD I V+N+ +   V  +V  +G V
Sbjct: 269 MVSRGAKVDMVYEGNHLTLVVPGEVLEDGQRGDRIMVRNMQSEKEVRATVESSGRV 324


>gi|148270381|ref|YP_001244841.1| SAF domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147735925|gb|ABQ47265.1| SAF domain [Thermotoga petrophila RKU-1]
          Length = 280

 Score = 37.4 bits (85), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   ++  P  + 
Sbjct: 161 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 220

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     +R++
Sbjct: 221 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 276


>gi|15644289|ref|NP_229341.1| flagellar protein FlgA, putative [Thermotoga maritima MSB8]
 gi|4982108|gb|AAD36608.1|AE001800_18 flagellar protein FlgA, putative [Thermotoga maritima MSB8]
          Length = 286

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   ++  P  + 
Sbjct: 167 INVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     +R++
Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 282


>gi|238785501|ref|ZP_04629484.1| Flagella basal body P-ring formation protein flgA [Yersinia
           bercovieri ATCC 43970]
 gi|238713603|gb|EEQ05632.1| Flagella basal body P-ring formation protein flgA [Yersinia
           bercovieri ATCC 43970]
          Length = 234

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R ++I  G  V+++       +++ G A+++A+I D + V
Sbjct: 153 GAVSLRQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGEGFNVNSYGKAMNNAAIQDNLRV 212

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG V + GT+R+++
Sbjct: 213 R-MASGQIVSGVVGEDGTIRIML 234


>gi|281412687|ref|YP_003346766.1| flagella basal body P-ring formation protein FlgA [Thermotoga
           naphthophila RKU-10]
 gi|281373790|gb|ADA67352.1| flagella basal body P-ring formation protein FlgA [Thermotoga
           naphthophila RKU-10]
          Length = 286

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   ++  P  + 
Sbjct: 167 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     +R++
Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 282


>gi|237745828|ref|ZP_04576308.1| molybdopterin synthase subunit MoaD [Oxalobacter formigenes HOxBLS]
 gi|229377179|gb|EEO27270.1| molybdopterin synthase subunit MoaD [Oxalobacter formigenes HOxBLS]
          Length = 85

 Score = 37.4 bits (85), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107
            IR  Y  SI++ VG+    ++LPD V  L  L R Y++ RG   R  L +GN
Sbjct: 2   KIRVRYFASIREAVGISEESIILPDRVKTLDDL-RGYLMDRGTIWREALAEGN 53


>gi|254438146|ref|ZP_05051640.1| SAF domain family [Octadecabacter antarcticus 307]
 gi|198253592|gb|EDY77906.1| SAF domain family [Octadecabacter antarcticus 307]
          Length = 224

 Score = 37.4 bits (85), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
           ++++DVVG V  + L P   +    L R + +  G  V + + +G   I T G+AL    
Sbjct: 135 NALEDVVGRVLVQSLSPRVPVMPRHLERDWAVDLGDVVSLRVVRGGTEIETFGVALESGQ 194

Query: 122 IGDVIAVKNIDTG 134
           IGD I ++N  +G
Sbjct: 195 IGDKIRIENRSSG 207


>gi|260222463|emb|CBA32052.1| hypothetical protein Csp_D30190 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 245

 Score = 37.0 bits (84), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 1/126 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
            +G A V    +N+G  ++ES +   +V  +  +          +G    R L     + 
Sbjct: 119 AMGEAWVVRNQVNSGANISESDVTRGEVDWAEEQSPVLADKTAWLGQTASRTLTTGQAMR 178

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
             ++    V   GA V+I+       IS+   ALS   IG    V+ +D G + SG+V+D
Sbjct: 179 QGMVRPAQVFQAGASVKIVAQGPGFQISSEAQALSAGVIGQQARVR-MDNGRVASGTVLD 237

Query: 144 TGTVRV 149
             TV++
Sbjct: 238 MRTVKI 243


>gi|222447129|pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From
           Thermotoga Maritima Msb8
          Length = 278

 Score = 37.0 bits (84), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   ++  P  + 
Sbjct: 152 INVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 211

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     +R++
Sbjct: 212 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 267


>gi|149911708|ref|ZP_01900316.1| flagella basal body P ring formation protein FlgA [Moritella sp.
           PE36]
 gi|149805238|gb|EDM65255.1| flagella basal body P ring formation protein FlgA [Moritella sp.
           PE36]
          Length = 233

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 36/58 (62%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ +G  V +  + GN+T+ T G+AL++  +G+ I V+N  +  +VSG V   G +++
Sbjct: 174 LVCKGENVTLTSSVGNLTVKTDGMALANGILGEKIKVRNSKSKRIVSGIVQAAGIIQI 231


>gi|121607565|ref|YP_995372.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2]
 gi|121552205|gb|ABM56354.1| SAF domain [Verminephrobacter eiseniae EF01-2]
          Length = 281

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V  R L    V+  +++  P++   GA+V++ +      +  AG ALS  + G ++ V
Sbjct: 200 GQVAARPLRAGQVLRQTMVRAPWLFPAGAQVKVQVLGPGYAVVAAGQALSAGATGQMVRV 259

Query: 129 KNIDTGVMVSGSVVDTGTV 147
           + +D G +VSG V   GT+
Sbjct: 260 R-MDNGRIVSGMVNAAGTI 277


>gi|254477189|ref|ZP_05090575.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
           R11]
 gi|214031432|gb|EEB72267.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
           R11]
          Length = 138

 Score = 37.0 bits (84), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +VP   I A E++     +++ + ++++ G  +    +V+G   R  L     +    + 
Sbjct: 21  LVPVRTIRAKEIVTA---EDLALKSADVLGALSDP-SEVIGKEARVALYAGRPVRAGDVG 76

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++ R   V I  T+G +TI   G +L   + G+ I V N+ +   V+G +   GTV 
Sbjct: 77  PPAIVERNDLVTIRFTRGGLTIMAEGRSLGRGADGEAIRVMNLSSRTTVTGRIASDGTVE 136

Query: 149 V 149
           V
Sbjct: 137 V 137


>gi|294339847|emb|CAZ88210.1| putative Flagella basal body P-ring formation protein flgA
           [Thiomonas sp. 3As]
          Length = 244

 Score = 37.0 bits (84), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 55/118 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + AG VL  + L  ++   + +        + +VG V R  +     +  S+L  P ++ 
Sbjct: 127 LQAGHVLTAADLTMVERDATRLPPGAVTDAQALVGQVLRYSVAAGQPLAQSMLTGPQLVH 186

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
            G  V +I     + +   G A++D  +G  + V+N+ +G +VSG V   G V V ++
Sbjct: 187 YGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVRNVQSGRVVSGIVDAQGQVVVPLQ 244


>gi|119384848|ref|YP_915904.1| flagellar basal body P-ring biosynthesis protein FlgA [Paracoccus
           denitrificans PD1222]
 gi|119374615|gb|ABL70208.1| SAF domain [Paracoccus denitrificans PD1222]
          Length = 138

 Score = 37.0 bits (84), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 38/86 (44%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
             I  VVG   R ++     I  S L  P ++ R   V I   +  + I   G ALS  S
Sbjct: 48  EDIAQVVGQQLRVMVYQGRRIDPSTLTAPTLVGRNQIVTIAYEKATLRIEAEGRALSAGS 107

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147
            G +I V N  + V VSG V   GTV
Sbjct: 108 AGQIIRVMNNASRVTVSGRVAPDGTV 133


>gi|167725926|ref|ZP_02409162.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei DM98]
          Length = 233

 Score = 37.0 bits (84), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           + +G  +RR L    V+   +L  P +I RG  VRI+   G   I   GIA+   +  DV
Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQSGAQDDV 197

Query: 126 IAVK 129
           I ++
Sbjct: 198 IRLR 201


>gi|271500062|ref|YP_003333087.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech586]
 gi|270343617|gb|ACZ76382.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech586]
          Length = 222

 Score = 37.0 bits (84), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +DV G V  R + P   I   ++ +P+VI  G  V+I+      ++ + G A+++A+ G 
Sbjct: 137 EDVQGAVALRDIAPGQAITQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQ 196

Query: 125 VIAVKNIDTGVMVSG 139
               +   +G +VSG
Sbjct: 197 QARARTA-SGQVVSG 210


>gi|127512273|ref|YP_001093470.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           loihica PV-4]
 gi|126637568|gb|ABO23211.1| SAF domain protein [Shewanella loihica PV-4]
          Length = 235

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 7/135 (5%)

Query: 19  SLFASVIGHAVVPSVVIN----AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
            ++ SV    + P VV N     G+++   +++   V  S +RG        V G   +R
Sbjct: 102 QIYISVRVEVLFPVVVANQTLGPGDLIESDQIRLDYVEQSQLRGQQFDDPVAVTGTRVKR 161

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            +  +  +  S L     + +G  V I     N  I T G AL D ++GD I V+N  + 
Sbjct: 162 RIPANQPLFASNL---CFVCKGDIVAIYARADNFVIKTNGEALKDGNLGDKIQVRNSRSN 218

Query: 135 VMVSGSVVDTGTVRV 149
             V   V   G V V
Sbjct: 219 KTVDAHVTGIGEVEV 233


>gi|114765243|ref|ZP_01444375.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
           bermudensis HTCC2601]
 gi|114542378|gb|EAU45406.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           HTCC2601]
          Length = 220

 Score = 36.6 bits (83), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 40/82 (48%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G+  RR+L     +    +  P VI RG KV I+   G + ++  G AL+DA  G  + +
Sbjct: 138 GMQVRRMLAQGRPVMRQSVMEPLVIGRGDKVNILYDDGRLVVTAPGRALTDAHRGQDVRI 197

Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
            N+ +   ++    + G V V+
Sbjct: 198 VNLVSNNALTAVAREEGLVEVI 219


>gi|238764388|ref|ZP_04625338.1| Flagella basal body P-ring formation protein flgA [Yersinia
           kristensenii ATCC 33638]
 gi|238697414|gb|EEP90181.1| Flagella basal body P-ring formation protein flgA [Yersinia
           kristensenii ATCC 33638]
          Length = 233

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V+ R +     +  ++L R +V+  G  V+++       ++ +G A+++A++ D + V
Sbjct: 152 GAVSLRQINAGQPLTRNMLRRLWVVKAGQYVQVLAQGDGFNVNGSGKAMNNAAVQDNVRV 211

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           + + +G +VSG+V D G +++++
Sbjct: 212 R-MASGQIVSGTVSDDGIIKIIL 233


>gi|39936962|ref|NP_949238.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris CGA009]
 gi|39650819|emb|CAE29342.1| Flageller protein FlgA [Rhodopseudomonas palustris CGA009]
          Length = 342

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G+  R+ L    V+  + L +P +++R   V +I     + ++  G AL   + GDV+ 
Sbjct: 247 IGMQARQTLRSGQVLRSADLAKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVN 306

Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151
           V N+ +   ++G+V+  G V + V
Sbjct: 307 VLNLQSKRTITGTVIGRGQVAITV 330


>gi|146307875|ref|YP_001188340.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina ymp]
 gi|145576076|gb|ABP85608.1| SAF domain protein [Pseudomonas mendocina ymp]
          Length = 252

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y       +G    R L  D +I  + L    VI RG +V I  + G + +   G AL+D
Sbjct: 161 YLTDPTQAIGKKLTRQLNSDQIITPAHLQVAEVIRRGDQVVISASGGTVNVRMPGEALTD 220

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
            + G  I V+N+ +  ++   VV  G V V +
Sbjct: 221 GAPGQQINVRNLRSQRVIRARVVGPGQVEVAM 252


>gi|24459271|gb|AAL86624.1| FlgA [Vibrio fischeri ES114]
          Length = 248

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
           RG Y + + D+VG   +R +     +  + +    ++ R   V I   +G ++I T G A
Sbjct: 158 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 213

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           L D ++GD + VKN  +  +V+G V   G + +
Sbjct: 214 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 246


>gi|190574268|ref|YP_001972113.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Stenotrophomonas maltophilia K279a]
 gi|190012190|emb|CAQ45813.1| putative flagella basal body P-ring formation protein
           [Stenotrophomonas maltophilia K279a]
          Length = 218

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  GE L  + +   Q   + I G         +G + RR L    ++  + L    +I 
Sbjct: 102 IGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +V G+V   G V
Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214


>gi|315179622|gb|ADT86536.1| Flagellar basal body P-ring biosynthesis protein [Vibrio furnissii
           NCTC 11218]
          Length = 233

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 36/67 (53%)

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +  GL   R L    ++  +++ +P ++ +G +V II  +  +  ST G+AL D   G
Sbjct: 146 IDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRG 205

Query: 124 DVIAVKN 130
           + I V+N
Sbjct: 206 EQIEVQN 212


>gi|59712487|ref|YP_205263.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           fischeri ES114]
 gi|59480588|gb|AAW86375.1| flagellar P-ring chaperone FlgA [Vibrio fischeri ES114]
          Length = 255

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
           RG Y + + D+VG   +R +     +  + +    ++ R   V I   +G ++I T G A
Sbjct: 165 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 220

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           L D ++GD + VKN  +  +V+G V   G + +
Sbjct: 221 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 253


>gi|296135677|ref|YP_003642919.1| flagella basal body P-ring formation protein FlgA [Thiomonas
           intermedia K12]
 gi|295795799|gb|ADG30589.1| flagella basal body P-ring formation protein FlgA [Thiomonas
           intermedia K12]
          Length = 242

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + AG VL  + L  ++   + +        + +VG V R  +     +  S+L  P ++ 
Sbjct: 125 LQAGHVLTAADLTTVERDAARLPPGAVTDAQALVGQVLRYSVAAGQPLVQSMLTGPQLVH 184

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
            G  V +I     + +   G A++D  +G  + V+N+ +G +VSG +VDT
Sbjct: 185 YGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVRNVQSGRVVSG-IVDT 233


>gi|192292790|ref|YP_001993395.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris TIE-1]
 gi|192286539|gb|ACF02920.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris TIE-1]
          Length = 342

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G+  R+ L    V+  + L +P +++R   V +I     + ++  G AL   + GDV+ 
Sbjct: 247 IGMQARQTLRSGQVLRGADLAKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVN 306

Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151
           V N+ +   ++G+V+  G V + V
Sbjct: 307 VLNLQSKRTITGTVIGRGQVAITV 330


>gi|114320051|ref|YP_741734.1| flageller protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226445|gb|ABI56244.1| flagellar protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
          Length = 238

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%)

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y    + ++G   RR L    +I  + L  P ++ RG  V +    G + ++  G AL  
Sbjct: 147 YETEAEHLIGKELRRSLRRGDLIAGNALAAPQLVQRGRSVTLRAGGGRVQVTGQGKALES 206

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             +GD++ V+   +G +V G V     V V
Sbjct: 207 GVLGDIVRVEAGSSGRVVEGRVAGESLVEV 236


>gi|260779351|ref|ZP_05888243.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605515|gb|EEX31810.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 265

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    IN  + ++   LK ++    N   ++   +  V G+V  R +    ++    L 
Sbjct: 144 VVTKTGINRDQAISPMNLK-LEKRTLNREQDFFTQLSQVSGMVASRRIRSGQILDPRKLE 202

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
              ++++G +V I  ++   T ST G+AL   + G+ I V+N  +G ++  
Sbjct: 203 STPLVAKGNQVVITASKNGFTASTKGVALEQGTRGEQIDVQNSSSGKVIKA 253


>gi|227538321|ref|ZP_03968370.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241836|gb|EEI91851.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 692

 Score = 36.2 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           ++DSL   VI ++++P ++       +++ +   QV++ NIR N   S  D+   V  + 
Sbjct: 564 NMDSLQHPVIAYSILPDLL----RYTHQNEINFEQVSDDNIRQNLRLSTSDISITVLEKY 619

Query: 76  LLPDHVIPLSVL 87
           + PD V+P  +L
Sbjct: 620 ITPDKVLPSQIL 631


>gi|197334457|ref|YP_002156706.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
           MJ11]
 gi|197315947|gb|ACH65394.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
           MJ11]
          Length = 211

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
           RG Y + + D+VG   +R +     +  + +    ++ R   V I   +G ++I T G A
Sbjct: 121 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 176

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           L D ++GD + VKN  +  +V+G V   G + +
Sbjct: 177 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 209


>gi|331006029|ref|ZP_08329371.1| Flagellar basal-body P-ring formation protein flgA [gamma
           proteobacterium IMCC1989]
 gi|330420158|gb|EGG94482.1| Flagellar basal-body P-ring formation protein flgA [gamma
           proteobacterium IMCC1989]
          Length = 241

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           +I +G KV I    G++T+ T+G AL +   G+ I VKN+ +  ++   ++   +V V++
Sbjct: 182 LIKKGDKVNISAKVGSLTVVTSGTALDNGRKGEQIDVKNLRSSRIIRTKIIGASSVEVIL 241


>gi|308050028|ref|YP_003913594.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
 gi|307632218|gb|ADN76520.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
          Length = 252

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 47  KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           +E+ VT+ +    +  +   +VG   RR +  D  I  S +  P  +S G +V I    G
Sbjct: 152 RELGVTSQD----WVFARDALVGQSVRRAIRADKPIRHSQVTAPNWVSLGQEVLIEAAGG 207

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             +    G+AL   S G  + V+N+ +G +++   V  G V+ 
Sbjct: 208 GFSAVMKGVALDAGSEGQPVRVRNLSSGQVITAYPVAPGKVQT 250


>gi|119899031|ref|YP_934244.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
           BH72]
 gi|119671444|emb|CAL95357.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
           BH72]
          Length = 256

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+G  +V +  + AG+++  + L       + +  N    +    G  TR  +     +
Sbjct: 129 SVLGEYLVTAQPLRAGQIIGPADLVRRDGDLATLPDNTLTDVAQASGQYTRFAIAQGSPL 188

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK----NIDTGVMVS 138
              +L  P  + +G  V+++       +S+ G+AL++ + GD + V+     + TG   +
Sbjct: 189 RADMLRIPPAVRQGQTVQVVTVGSGFRVSSEGVALNNGAPGDPVRVRLGGGQVVTGAARA 248

Query: 139 GSVVD 143
           G VV+
Sbjct: 249 GGVVE 253


>gi|317053421|ref|YP_004119188.1| NADPH-dependent FMN reductase [Pantoea sp. At-9b]
 gi|316953160|gb|ADU72632.1| NADPH-dependent FMN reductase [Pantoea sp. At-9b]
          Length = 183

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
           ++++GE+L+    K + + N ++R + AHS +    L     LLPD   P + L  PYV+
Sbjct: 96  IVSSGELLD----KPLALPNLSVRAHLAHS-QLAETLTVMGALLPDQCCPRATLATPYVL 150

Query: 94  SRGAKVRII 102
               +  +I
Sbjct: 151 PESTEFSLI 159


>gi|332994168|gb|AEF04223.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
           sp. SN2]
          Length = 240

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV S  ++ G VL+ S L    V    +R +    +  ++G   +R ++    +  ++L 
Sbjct: 121 VVTSGAVSPGTVLSASNLTLASVDIKRLRYSAFTDVDALIGARMKRRIVDGQAVQSNML- 179

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
               + +G ++ I  + G M + T+GIA  D  IGD I V N
Sbjct: 180 --CFVCKGDRITIRASLGGMAVKTSGIAQQDGVIGDTIKVLN 219


>gi|160876209|ref|YP_001555525.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS195]
 gi|160861731|gb|ABX50265.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS195]
 gi|315268399|gb|ADT95252.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS678]
          Length = 235

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GE+++ S+++   +  +++RG        + G+  +R +  D+ I   + +
Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   +  + TAG AL D + GD I VKN  +   +   V   G V 
Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|304409984|ref|ZP_07391603.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|307302303|ref|ZP_07582061.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
 gi|304351393|gb|EFM15792.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|306914341|gb|EFN44762.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
          Length = 235

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GE+++ S+++   +  +++RG        + G+  +R +  D+ I   + +
Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   +  + TAG AL D + GD I VKN  +   +   V   G V 
Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|167039378|ref|YP_001662363.1| SAF domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914019|ref|ZP_07131336.1| SAF domain protein [Thermoanaerobacter sp. X561]
 gi|307725296|ref|YP_003905047.1| SAF domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166853618|gb|ABY92027.1| SAF domain [Thermoanaerobacter sp. X514]
 gi|300890704|gb|EFK85849.1| SAF domain protein [Thermoanaerobacter sp. X561]
 gi|307582357|gb|ADN55756.1| SAF domain protein [Thermoanaerobacter sp. X513]
          Length = 181

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
          I AG V++E  +K + +  S +R +YA S+ DVVG V +   +    IP+ +L
Sbjct: 39 IPAGTVISEDAVKVVDIPASAVRPDYARSLTDVVGKVVKEGRVRGDFIPVEIL 91


>gi|254524107|ref|ZP_05136162.1| flagellar protein [Stenotrophomonas sp. SKA14]
 gi|219721698|gb|EED40223.1| flagellar protein [Stenotrophomonas sp. SKA14]
          Length = 218

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  GE +  + +   Q   + I G         +G + RR L    ++  + L    +I 
Sbjct: 102 IGTGETITAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +V G+V   G V
Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214


>gi|254478346|ref|ZP_05091725.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035704|gb|EEB76399.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 181

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%)

Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
          I AG V++E  +K + V  S +R  YA S+ DVVG V +   +    IP+ +L
Sbjct: 39 IPAGTVISEDAVKIIDVPASAVRPEYARSLTDVVGKVVKEGRVRGDFIPVEIL 91


>gi|120598226|ref|YP_962800.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. W3-18-1]
 gi|146293696|ref|YP_001184120.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           putrefaciens CN-32]
 gi|120558319|gb|ABM24246.1| SAF domain [Shewanella sp. W3-18-1]
 gi|145565386|gb|ABP76321.1| SAF domain [Shewanella putrefaciens CN-32]
 gi|319427095|gb|ADV55169.1| flagella basal body P-ring formation protein FlgA [Shewanella
           putrefaciens 200]
          Length = 235

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV + ++  G+ +N S+++   +  +++RG        + G   +R +  +  I  + L 
Sbjct: 116 VVTTEILAPGDRINASQIEVRYIEQNSLRGQQFDDPSQLEGTRVKRRIAKESPIFANNL- 174

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   + I +   +  + TAG AL D +IG+ I VKN  +   +   V+  G V 
Sbjct: 175 --CFVCKNDAISIYVRSPSFMLKTAGEALQDGNIGEQIRVKNSSSNKQLDAIVIGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|209884525|ref|YP_002288382.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
 gi|209872721|gb|ACI92517.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
          Length = 351

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +RF  F      +++++ A+V+   +  + +I A + LN  R  + +V      G  A  
Sbjct: 190 LRFTGF------AVETVQAAVLMRPIGRNEIIKASD-LNVERRPKAEV------GGDAIP 236

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           ++  +G+ TRR +     +  S L +  +++R   + ++     + +++ G AL   + G
Sbjct: 237 LEQAIGMQTRRAMRIGDALRSSDLAKADLVTRDQTISLVYETPGLYLTSRGKALEAGTKG 296

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           D ++V N+ +   V G VV  G V ++ 
Sbjct: 297 DTVSVLNLQSKRTVQGIVVGPGQVAIIA 324


>gi|308273545|emb|CBX30147.1| hypothetical protein N47_D29560 [uncultured Desulfobacterium sp.]
          Length = 251

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV---VGLVTRRV 75
           S +  V    V  S  +N G+V+      ++ +   NI    + ++KDV   +G + +  
Sbjct: 119 SGWVDVFDSVVCASHNLNRGDVITAG---DIHLERKNISRLNSDTLKDVDQAIGFMAKHD 175

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +  +  +   +L +  ++++G  V I+   G++ I+  G  L    +GD I V+N  +  
Sbjct: 176 IKDNDCLKEWMLKKTPLVNKGDMVTILAEHGSIRITAPGRILEKGYMGDYIKVQNTMSKK 235

Query: 136 MVSGSVVDTGTV 147
            V   +V+  TV
Sbjct: 236 SVYAKIVNDSTV 247


>gi|126175152|ref|YP_001051301.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS155]
 gi|125998357|gb|ABN62432.1| SAF domain [Shewanella baltica OS155]
          Length = 235

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GE+++ S+++   +  +++RG        + G+  +R +  D+ I   + +
Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   +  + TAG AL D + GD I VKN  +   +   V   G V 
Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|310816832|ref|YP_003964796.1| flagella basal body P-ring formation protein FlgA
           [Ketogulonicigenium vulgare Y25]
 gi|308755567|gb|ADO43496.1| flagella basal body P-ring formation protein FlgA
           [Ketogulonicigenium vulgare Y25]
          Length = 138

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 34/68 (50%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +++GL  R  +     +  S   +P ++ R   + +  T+G +TI   G AL  A  GD+
Sbjct: 53  EIIGLEARTPIYAGRPLQASQFGQPAIVQRNQVIAMQFTRGALTIMAEGRALERAGPGDL 112

Query: 126 IAVKNIDT 133
           I V N+ +
Sbjct: 113 IRVMNLQS 120


>gi|260772269|ref|ZP_05881185.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           metschnikovii CIP 69.14]
 gi|260611408|gb|EEX36611.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           metschnikovii CIP 69.14]
          Length = 255

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           V+G  T+R L    VI  + +    V+ R   V I      M I+T G ALSD ++G+ I
Sbjct: 174 VIGAKTKRNLQLGDVINRNDI---CVVCRNESVLIRAISNGMNITTRGTALSDGNLGEQI 230

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            VKN  +  ++   V   G V V
Sbjct: 231 KVKNDRSNRIIDAQVSGMGEVTV 253


>gi|291326358|ref|ZP_06124207.2| flagella basal body P-ring formation protein FlgA [Providencia
           rettgeri DSM 1131]
 gi|291314705|gb|EFE55158.1| flagella basal body P-ring formation protein FlgA [Providencia
           rettgeri DSM 1131]
          Length = 212

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V  R +        S+  +P+ I  G  V +  +  N ++   G A+++A+ G    V
Sbjct: 130 GAVALRNIPAGQTFTKSMTRQPWAIKAGQTVFVFASGDNFSVKYEGRAINNATAGQNTRV 189

Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152
           + ++ G +V+G  ++ G+V+V +K
Sbjct: 190 RLLN-GQVVNGEALENGSVQVALK 212


>gi|297570290|ref|YP_003691634.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926205|gb|ADH87015.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 247

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 60/123 (48%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G  V+ +  IN GEV++   L   +     + G+  +    V G+  R  L    ++  
Sbjct: 121 MGQVVMTARRINRGEVISRDDLVVHRRDIGMLDGSIINDPALVAGMQLRTTLQAGAIVYQ 180

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           ++L +P ++ RG +V I  + G + ++  G      + GD++ V+N+ +   +   VV++
Sbjct: 181 NLLEKPPLVRRGDRVTIRASTGRVLVNAPGEVREIGAEGDLVRVRNLMSRREIMARVVNS 240

Query: 145 GTV 147
           G V
Sbjct: 241 GLV 243


>gi|163738059|ref|ZP_02145475.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
 gi|161388675|gb|EDQ13028.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
          Length = 138

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%)

Query: 14  VLSLDSLFASVIGHA--VVPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVG 69
           +L++  LF +    A  +VP   I A E++    L  K+ +V  +    +     +  V 
Sbjct: 4   ILAIVMLFCAQPAWADILVPVRTIRAKEIVTAEDLVLKQAEVLGAISDPSLVIGQEARVA 63

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L   R + P  V P      P ++ R   V I   +G +TI   G +L   + G+ I V 
Sbjct: 64  LYAGRPMRPGDVGP------PAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVM 117

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +   +SG +   GTV V
Sbjct: 118 NLSSRTTISGRIAADGTVEV 137


>gi|209695768|ref|YP_002263698.1| flagellar basal body P-ring biosynthesis protein FlgA [Aliivibrio
           salmonicida LFI1238]
 gi|208009721|emb|CAQ80025.1| polar flagellar basal-body P-ring formation protein FlgA
           [Aliivibrio salmonicida LFI1238]
          Length = 248

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
           RG Y ++  D++G   +R +    V+  + +    ++ R   V I   +G ++I T G A
Sbjct: 158 RGGYINT-NDLIGSRIKRSVRAGDVVEKNDI---CMVCRNDSVIIKAVKGELSILTKGTA 213

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           L DA++GD + V+N  +  +++G V   G + +
Sbjct: 214 LGDAALGDNVNVQNNKSKRIINGVVTAVGEISI 246


>gi|77464903|ref|YP_354407.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
 gi|332559801|ref|ZP_08414123.1| FlgA2 [Rhodobacter sphaeroides WS8N]
 gi|77389321|gb|ABA80506.1| putative flagellar basal-body P-ring formation protein FlgA
           [Rhodobacter sphaeroides 2.4.1]
 gi|332277513|gb|EGJ22828.1| FlgA2 [Rhodobacter sphaeroides WS8N]
          Length = 139

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 47  KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           +++ +   ++ G  A  +   +G   R  L     +  + L  P +I R   V +    G
Sbjct: 34  EDLALAPQDMPGALAE-LSQALGQEARVTLYAGRPVRAADLGPPAIIDRNQLVPLSYRLG 92

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            + I   G ALS   +GD I V N+ +   VSG + + G V V
Sbjct: 93  ALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVHV 135


>gi|224013241|ref|XP_002295272.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968995|gb|EED87338.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 373

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)

Query: 40  VLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL-----PDHVIPLSVLHRPYVIS 94
           V   S L  M     +++G  A+ I   VG +T  VLL       H++ L  +   Y + 
Sbjct: 249 VWGGSCLVPMHYAQGDVKG-LAYVISFSVGALTVTVLLWVARFAYHLVKLKSVWEAYEVL 307

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
               +R++L  G    +TAG   S  ++G ++AVK++  GV  S S
Sbjct: 308 PSFHLRVMLLPG----ATAGSLWSIGNVGSIVAVKHLGQGVGYSAS 349


>gi|325927870|ref|ZP_08189094.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           perforans 91-118]
 gi|325541710|gb|EGD13228.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           perforans 91-118]
          Length = 214

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RRVL    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|167036494|ref|YP_001664072.1| SAF domain-containing protein [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|320114922|ref|YP_004185081.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
          finnii Ako-1]
 gi|166855328|gb|ABY93736.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928013|gb|ADV78698.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii
          Ako-1]
          Length = 180

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
          I AG V+++  +K   V  S +R NYA S+ DV+G V +   +    IP+ +L
Sbjct: 39 IPAGTVISQDAVKVTDVPASVVRPNYAKSLADVIGKVVKEGRVQGDFIPVEIL 91


>gi|313672413|ref|YP_004050524.1| flagella basal body p-ring formation protein flga [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939169|gb|ADR18361.1| flagella basal body P-ring formation protein FlgA [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 281

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 45  RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
           ++KE+QV  +N++ +   +  D + +   + +  + VI L ++ +     +G KV++I  
Sbjct: 180 KIKEVQVEVTNLKDDLFLNNFDAIAI---QPIPKNRVITLKMVRQMPEKMKGEKVKVIYN 236

Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            G + +    + + DA  G  ++VKN+ +  +++G
Sbjct: 237 NGTIVLEFEAVLMDDAYKGGRVSVKNLSSDKVLTG 271


>gi|30248318|ref|NP_840388.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
           europaea ATCC 19718]
 gi|30138204|emb|CAD84212.1| putative flagella basal body P-ring formation protein [Nitrosomonas
           europaea ATCC 19718]
          Length = 230

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LYV     +   V+ HA  P   ++ G+ L    +   +     I G  A     V+G
Sbjct: 94  WTLYVPVEIEVITRVV-HAAQP---VSMGKQLEAQDIVSKEADLVRIPGEVATDPDQVIG 149

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    L     I    L  P+VISRG KVR+  T     +S  G AL+ A+ G+V+ V+
Sbjct: 150 KVATTFLASGQPIRTHQLRAPHVISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVR 209

Query: 130 N----IDTGVMVSGSVVD 143
           N    I  G+  +G VV+
Sbjct: 210 NHTGRIIRGIARAGGVVE 227


>gi|153001478|ref|YP_001367159.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS185]
 gi|151366096|gb|ABS09096.1| SAF domain protein [Shewanella baltica OS185]
          Length = 235

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GE+++ S+++   +  +++RG        + G+  +R +  D+ I   + +
Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDNPI---LSN 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   +  + TAG AL D + GD I VKN  +   +   V   G V 
Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|166712067|ref|ZP_02243274.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 214

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|39998141|ref|NP_954092.1| flagella basal body P-ring formation protein flgA [Geobacter
           sulfurreducens PCA]
 gi|39985087|gb|AAR36442.1| flagella basal body P-ring formation protein flgA, putative
           [Geobacter sulfurreducens PCA]
 gi|298507078|gb|ADI85801.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           sulfurreducens KN400]
          Length = 248

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 48/96 (50%)

Query: 54  SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
           S++ G    SI +VVG   +  +  +  +  + + +  ++  G  V II     + ++  
Sbjct: 151 SSVNGRVYRSIDEVVGKRVKNAVRANTPLSGASIEKVPLVKSGQLVTIIAESPALRLTAT 210

Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G A  + + GD+I V+N+ +   +   V+D GTV+V
Sbjct: 211 GKARGNGAEGDIIKVQNMGSLKEIPARVIDVGTVQV 246


>gi|58582190|ref|YP_201206.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|188576751|ref|YP_001913680.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188576942|ref|YP_001913871.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|58426784|gb|AAW75821.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521203|gb|ACD59148.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188521394|gb|ACD59339.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 214

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|84624083|ref|YP_451455.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|84368023|dbj|BAE69181.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 214

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|89068732|ref|ZP_01156118.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
 gi|89045695|gb|EAR51757.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
          Length = 218

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP   I   E++ E+ L  +++    +       ++ +VG+  RRVL     +    +  
Sbjct: 97  VPVRRILPDEIIAEADLDVVRLPMGRVGAFAVVDLEALVGMQVRRVLSQGRPVMSQSVIE 156

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P VI RG  V I  + G + ++  G A++ A  G  + V N+ +  +V+G     G V V
Sbjct: 157 PLVIERGDAVSIRYSDGALELTAPGRAMAGAHRGQDVRVVNLASNRLVTGIAARDGIVEV 216

Query: 150 V 150
           +
Sbjct: 217 L 217


>gi|126463745|ref|YP_001044859.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105409|gb|ABN78087.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
          Length = 139

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 47  KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
           +++ +   ++ G  A  +   +G   R  L     +  + L  P +I R   V +    G
Sbjct: 34  EDLALAPQDMPGALAE-LSQALGQEARVTLYAGRPVRAADLGPPAIIDRNQLVPLSYRLG 92

Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            + I   G ALS   +GD I V N+ +   VSG + + G V V
Sbjct: 93  ALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVHV 135


>gi|117919766|ref|YP_868958.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. ANA-3]
 gi|117612098|gb|ABK47552.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. ANA-3]
          Length = 235

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV S  +  GE+++ ++++   +  +++RG        + G+  +R +  +  I  + L 
Sbjct: 116 VVASETLAPGELISPTQVEIRYIDQNSLRGMQFSDTSQLSGVRVKRRVAKNFPIFANNL- 174

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   N  + T G AL D +IGD I VKN  +   +   V   G V 
Sbjct: 175 --CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|323702114|ref|ZP_08113782.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
           574]
 gi|323532996|gb|EGB22867.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
           574]
          Length = 234

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 29/63 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VVP   I    +L    +K   +    I+   A   KDVVG VTR  L P+  I LS 
Sbjct: 40  QVVVPKQTIGPNTMLTAQMVKVKDIPVEMIQPGTAMDTKDVVGKVTRSDLYPEEPILLSR 99

Query: 87  LHR 89
           LH+
Sbjct: 100 LHQ 102


>gi|229587471|ref|YP_002860509.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
 gi|229260129|gb|ACQ51166.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
          Length = 242

 Score = 34.7 bits (78), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 9   FFSLYV-LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           + S Y  ++L +L  S     ++   VIN GE++NE  ++E  +  +NI  N  +  KD+
Sbjct: 33  YVSEYANINLPTLNKSSKAPVIIAKRVINEGELINEGDIEEKIMPINNIAKNTINVKKDL 92

Query: 68  VGLVTRRVLLPDHVI 82
           +G +T   L P+  I
Sbjct: 93  IGKITVNKLEPNEQI 107


>gi|254420864|ref|ZP_05034588.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           sp. BAL3]
 gi|196187041|gb|EDX82017.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           sp. BAL3]
          Length = 203

 Score = 34.7 bits (78), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD--HVIPL 84
             V PSVVI AG++  ++R   +  TN N  G    +++   G V+      D     P 
Sbjct: 58  QRVGPSVVIEAGQLQAQARQAGLDWTNPN--GLRRVAVRRSTGPVSAAAAQTDLQASAPQ 115

Query: 85  S-VLHRP-----YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
           +  ++RP      VI+R   VR+    G + +S  G A+ +A++G+ +AV N
Sbjct: 116 NRPVYRPAGGGQQVIARNDMVRVTYQVGGVNLSIMGKAMRNAALGEPVAVLN 167


>gi|332284015|ref|YP_004415926.1| flagella basal body P-ring formation protein [Pusillimonas sp.
           T7-7]
 gi|330427968|gb|AEC19302.1| flagella basal body P-ring formation protein [Pusillimonas sp.
           T7-7]
          Length = 236

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI---RGNYAHSIKDVVGLVTRRVLLPD 79
           S+ G+  V +  I  GEV++   L +M     +I     N        VG +  + +   
Sbjct: 109 SIQGYYYVANRNIEVGEVVS---LDDMAAREGDILRLANNIIFDPSQAVGYIASQRIRAG 165

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  S L  P  I RG  VR          +  G AL + + G  I V+   +G ++SG
Sbjct: 166 GPIKSSALRDPDSIQRGQMVRTEARGAGFVATGEGQALQNGAPGAQIQVR-ASSGQVISG 224

Query: 140 SVVDTGTVRVVV 151
            VV+  TVR+V+
Sbjct: 225 VVVNAHTVRIVM 236


>gi|332296515|ref|YP_004438438.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfobium narugense DSM 14796]
 gi|332179618|gb|AEE15307.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfobium narugense DSM 14796]
          Length = 225

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-----G 134
            VI L ++ +   I  G +V ++   GN T S   +ALS  SIGD I V+ I       G
Sbjct: 154 QVIRLGLISKRIDIRLGQRVIVVGKVGNATFSLPAVALSSGSIGDDIKVRCITNNKVFIG 213

Query: 135 VMVSGSVVDTG 145
            ++S S V TG
Sbjct: 214 KIISSSEVQTG 224


>gi|330502728|ref|YP_004379597.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina NK-01]
 gi|328917014|gb|AEB57845.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina NK-01]
          Length = 234

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%)

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
           N+       +G    R L  D V+  S L    VI RG +V I      + +   G AL+
Sbjct: 142 NFLTDPTQAIGKKLTRQLGGDQVLAPSHLQIAEVIRRGDQVVISARGTTVNVRMPGEALT 201

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           D + G+ I V+N+ +  +V   VV  G V V +
Sbjct: 202 DGAPGEQINVRNLRSQRVVRARVVGPGQVEVAM 234


>gi|289666042|ref|ZP_06487623.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. vasculorum NCPPB702]
 gi|289670501|ref|ZP_06491576.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 214

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|78047591|ref|YP_363766.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78036021|emb|CAJ23712.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 252

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RRVL    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 168 AVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 227

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 228 SVENSSSRRVVQGIVEASGTV 248


>gi|163856431|ref|YP_001630729.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           petrii DSM 12804]
 gi|163260159|emb|CAP42461.1| flagella basal body P-ring formation protein FlgA [Bordetella
           petrii]
          Length = 241

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VG+  R  +     I  + L     ++RG +VRI        IS+ G AL DA  G  +
Sbjct: 158 IVGMRARYRIAAGQAIKGTALRSARAVTRGQQVRITARGAGFVISSEGEALDDAPPGAPV 217

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
            V+   +G +VSG V +   V VV+
Sbjct: 218 QVRT-PSGQVVSGIVRNATLVEVVL 241


>gi|78221653|ref|YP_383400.1| flageller protein FlgA [Geobacter metallireducens GS-15]
 gi|78192908|gb|ABB30675.1| flagellar protein FlgA [Geobacter metallireducens GS-15]
          Length = 236

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 6/130 (4%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV- 81
             +G  VV    +  G+V+  + +   +   S + G    S  +V+G   +R  +P    
Sbjct: 108 EALGDTVVVLRALERGDVIGAADVTVQRRDLSTLTGRVYRSADEVIG---KRARMPVRAN 164

Query: 82  IPL--SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
           +PL    L +  ++  G  V I++    M ++  G A  + + GD++ V+N+ +   V  
Sbjct: 165 MPLRGDQLEKVPLVKSGQLVTILVENQAMRLTATGKARGNGAEGDIVMVQNLGSLKEVPA 224

Query: 140 SVVDTGTVRV 149
            V+D GTV+V
Sbjct: 225 RVIDAGTVQV 234


>gi|217972592|ref|YP_002357343.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS223]
 gi|217497727|gb|ACK45920.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS223]
          Length = 235

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GE+++ S+++   +  +++RG        + G+  +R +  D+ I   + +
Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPGKLAGVRVKRRVSKDNPI---LSN 172

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
               + +   V I +   +  + TAG AL D + GD I VKN  +   +   V   G V 
Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232

Query: 149 V 149
           V
Sbjct: 233 V 233


>gi|167038605|ref|YP_001666183.1| SAF domain-containing protein [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|320116994|ref|YP_004187153.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
          finnii Ako-1]
 gi|166857439|gb|ABY95847.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319930085|gb|ADV80770.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii
          Ako-1]
          Length = 181

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
          I AG V++E  +K + V  S ++ NYA S+ +VVG V +   +    IP+ +L
Sbjct: 39 IPAGTVISEDAVKVVDVPASAVKPNYARSLSNVVGKVVKEGRVRGDFIPVEIL 91


>gi|209522282|ref|ZP_03270910.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           H160]
 gi|209497276|gb|EDZ97503.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           H160]
          Length = 342

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 96  GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G  VR++      +IS+ G A+++AS G  + VK  + G +VSG V D GTV +
Sbjct: 288 GQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVKTAN-GQIVSGIVKDGGTVEI 340


>gi|149193821|ref|ZP_01870919.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
           mediatlanticus TB-2]
 gi|149135774|gb|EDM24252.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
           mediatlanticus TB-2]
          Length = 157

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV---KNIDTGVMVSGS 140
           L+    P V+ RG  V + +   N+TI+T   AL D +IGD+I +   K I   ++V+ +
Sbjct: 94  LNTKKAPLVL-RGENVNVTIKSKNITITTTAKALKDGNIGDIINIEMNKRIYKAIVVNKN 152

Query: 141 VVD 143
            V+
Sbjct: 153 QVE 155


>gi|329898293|ref|ZP_08272376.1| flagellar protein [gamma proteobacterium IMCC3088]
 gi|328920858|gb|EGG28301.1| flagellar protein [gamma proteobacterium IMCC3088]
          Length = 316

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%)

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +V  L T R L     +  S       + +G  + + + +G ++I+    A     IG+V
Sbjct: 231 EVKHLETTRDLTSGEYLRKSNTKPTLAVRKGEILTLSIVRGMISITAQVRASEGGKIGEV 290

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           I ++NID+G +V G VVD G V ++
Sbjct: 291 IELENIDSGNLVLGMVVDIGKVELL 315


>gi|262404546|ref|ZP_06081101.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC586]
 gi|262349578|gb|EEY98716.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC586]
          Length = 255

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  IG+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIKAGRSGMSITTKGTAMSDGVIGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|295097207|emb|CBK86297.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 232

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           +F L FS+          S  G   V S  +  GE++ +  +  M  +  ++        
Sbjct: 95  KFYLPFSI----------SAQGTFWVASHSLKGGEIVQQGDITPMTGSIDDLPVGLMFEA 144

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +D+VG    R L     +  + L + + +  G  V ++++     I + G AL++A++ D
Sbjct: 145 RDIVGQRLLRPLSAGKPVLQNQLRQQWRLRAGQTVELVMSGPGFFIRSQGKALNNAAVDD 204

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
            + VK    G  V+G V   G V + ++
Sbjct: 205 TLRVKTTG-GRNVTGKVGRDGAVTIFLE 231


>gi|325918872|ref|ZP_08180949.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325534909|gb|EGD06828.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 214

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RRVL    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKSARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|183220920|ref|YP_001838916.1| flagellar protein FlgAide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911016|ref|YP_001962571.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775692|gb|ABZ93993.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779342|gb|ABZ97640.1| Flagellar protein FlgA; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 313

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 39/84 (46%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
           ++ ++ VG       LPD  I    +   + I RG +V ++ T GN+ +     AL+  +
Sbjct: 223 YTDENPVGKTALNGFLPDTAIEKKQVRTLHTIERGQEVELVYTVGNLLLKIKTRALASGN 282

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTG 145
            G+ I + N+ +   +   V + G
Sbjct: 283 RGEEIPLLNLASQKTIRARVQNEG 306


>gi|325921019|ref|ZP_08182901.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           gardneri ATCC 19865]
 gi|325548501|gb|EGD19473.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           gardneri ATCC 19865]
          Length = 214

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 130 AVGKTARRILPAGSLLSSNDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210


>gi|77748624|ref|NP_642314.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 214

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%)

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           VG   RR+L    ++  + L    ++ RG  V ++   G + +   G ALSDA   + ++
Sbjct: 131 VGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVS 190

Query: 128 VKNIDTGVMVSGSVVDTGTV 147
           V+N  +  +V G V  +GTV
Sbjct: 191 VENSSSRRVVQGIVEASGTV 210


>gi|220932493|ref|YP_002509401.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
           orenii H 168]
 gi|219993803|gb|ACL70406.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
           orenii H 168]
          Length = 336

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
           +L  DH      L +P VI  G  V   +   N+ +ST+  AL    +GD + V N +TG
Sbjct: 266 ILTTDH------LEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETG 319

Query: 135 VMVSGSVVDTGTVRVV 150
                 V+++  VRVV
Sbjct: 320 YEFKARVINSRLVRVV 335


>gi|167567746|ref|ZP_02360662.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           oklahomensis EO147]
 gi|167574697|ref|ZP_02367571.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           oklahomensis C6786]
          Length = 256

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +D +G  +RR +    ++    L  P +I RG  VR++   G   I   G+A+      D
Sbjct: 160 EDAIGRSSRRAVHAGQILRRRHLQTPELIRRGQTVRVVARVGRAEIVNTGVAMQSGGKDD 219

Query: 125 VIAV--------KNIDTGVMVSGSVVDTG 145
           VI V        K +D  +  +G+    G
Sbjct: 220 VIRVRVGGRSNHKTVDVRITAAGTAEPVG 248


>gi|315127359|ref|YP_004069362.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas sp. SM9913]
 gi|315015873|gb|ADT69211.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas sp. SM9913]
          Length = 213

 Score = 33.9 bits (76), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  GEV+  S L         IR  Y      ++G  ++R +     +P+ +L+
Sbjct: 94  VVATTNLARGEVITPSHLSIDMRPAHFIRAQYLEDPTALIGSRSKRNIR--EGMPV-LLN 150

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +  ++ +G  V I      + + T GIAL D ++G+ + V+N  TG +++  V    +V+
Sbjct: 151 QICMVCKGDSVTIYANIKGLRVKTTGIALEDGTLGEQVRVENKKTGKVLNARVDGVESVQ 210

Query: 149 V 149
           V
Sbjct: 211 V 211


>gi|329849715|ref|ZP_08264561.1| distal basal body ring component protein [Asticcacaulis
           biprosthecum C19]
 gi|328841626|gb|EGF91196.1| distal basal body ring component protein [Asticcacaulis
           biprosthecum C19]
          Length = 193

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 30/50 (60%)

Query: 96  GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           G  + +  + G +T++  G+A  DA++GD+I ++N  +  M+   V+ +G
Sbjct: 125 GEAISVTWSSGGLTLTITGVAQKDAAVGDLIQIQNPSSKKMIDAVVIGSG 174


>gi|293604999|ref|ZP_06687395.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           piechaudii ATCC 43553]
 gi|292816604|gb|EFF75689.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           piechaudii ATCC 43553]
          Length = 238

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV G+  V S +I+AG+ L    L        ++        + VVG+     +     +
Sbjct: 111 SVPGYYYVASRMISAGQALTPDDLAPRDGDLVSLPPGAITDPQAVVGMSAAFRINAGQPV 170

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S L     + RGA VRI        +S+ G AL +A+ G V+ V+   +G +VSG V 
Sbjct: 171 RSSSLRNAQSVMRGANVRINARGNGFVVSSEGQALDNAAPGAVVQVRTA-SGQVVSGVVR 229

Query: 143 DTGTVRV 149
           + G V +
Sbjct: 230 NAGLVEI 236


>gi|294664586|ref|ZP_06729927.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292605643|gb|EFF48953.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 268

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 184 AVGKAARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 243

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 244 SVENSSSRRVVQGIVEASGTV 264


>gi|153213632|ref|ZP_01948905.1| flagellar protein, putative [Vibrio cholerae 1587]
 gi|124115831|gb|EAY34651.1| flagellar protein, putative [Vibrio cholerae 1587]
          Length = 255

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|297580849|ref|ZP_06942774.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534675|gb|EFH73511.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 255

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|15642202|ref|NP_231834.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121586266|ref|ZP_01676056.1| flagellar protein, putative [Vibrio cholerae 2740-80]
 gi|121726549|ref|ZP_01679798.1| flagellar protein, putative [Vibrio cholerae V52]
 gi|147674697|ref|YP_001217720.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae O395]
 gi|153817121|ref|ZP_01969788.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
 gi|153820832|ref|ZP_01973499.1| flagellar protein, putative [Vibrio cholerae B33]
 gi|153825364|ref|ZP_01978031.1| flagellar protein, putative [Vibrio cholerae MZO-2]
 gi|153829335|ref|ZP_01982002.1| putative flagellar protein [Vibrio cholerae 623-39]
 gi|183179559|ref|ZP_02957770.1| flagellar protein, putative [Vibrio cholerae MZO-3]
 gi|227082327|ref|YP_002810878.1| flagellar protein, putative [Vibrio cholerae M66-2]
 gi|229507720|ref|ZP_04397225.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           BX 330286]
 gi|229512085|ref|ZP_04401564.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           B33]
 gi|229513847|ref|ZP_04403309.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TMA 21]
 gi|229519220|ref|ZP_04408663.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC9]
 gi|229528792|ref|ZP_04418182.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           12129(1)]
 gi|229607224|ref|YP_002877872.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MJ-1236]
 gi|254225797|ref|ZP_04919402.1| flagellar protein, putative [Vibrio cholerae V51]
 gi|254286488|ref|ZP_04961445.1| flagellar protein, putative [Vibrio cholerae AM-19226]
 gi|254849332|ref|ZP_05238682.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MO10]
 gi|298500419|ref|ZP_07010224.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MAK 757]
 gi|9656759|gb|AAF95348.1| flagellar protein, putative [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549532|gb|EAX59558.1| flagellar protein, putative [Vibrio cholerae 2740-80]
 gi|121631002|gb|EAX63381.1| flagellar protein, putative [Vibrio cholerae V52]
 gi|125621703|gb|EAZ50032.1| flagellar protein, putative [Vibrio cholerae V51]
 gi|126512389|gb|EAZ74983.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
 gi|126521624|gb|EAZ78847.1| flagellar protein, putative [Vibrio cholerae B33]
 gi|146316580|gb|ABQ21119.1| putative flagellar protein [Vibrio cholerae O395]
 gi|148875176|gb|EDL73311.1| putative flagellar protein [Vibrio cholerae 623-39]
 gi|149741048|gb|EDM55117.1| flagellar protein, putative [Vibrio cholerae MZO-2]
 gi|150423437|gb|EDN15381.1| flagellar protein, putative [Vibrio cholerae AM-19226]
 gi|183012970|gb|EDT88270.1| flagellar protein, putative [Vibrio cholerae MZO-3]
 gi|227010215|gb|ACP06427.1| flagellar protein, putative [Vibrio cholerae M66-2]
 gi|227014099|gb|ACP10309.1| flagellar protein, putative [Vibrio cholerae O395]
 gi|229332566|gb|EEN98052.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           12129(1)]
 gi|229343909|gb|EEO08884.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC9]
 gi|229349028|gb|EEO13985.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TMA 21]
 gi|229352050|gb|EEO16991.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           B33]
 gi|229355225|gb|EEO20146.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           BX 330286]
 gi|229369879|gb|ACQ60302.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           MJ-1236]
 gi|254845037|gb|EET23451.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MO10]
 gi|297541112|gb|EFH77166.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MAK 757]
          Length = 255

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|229522152|ref|ZP_04411569.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TM 11079-80]
 gi|229524198|ref|ZP_04413603.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           bv. albensis VL426]
 gi|229337779|gb|EEO02796.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           bv. albensis VL426]
 gi|229341077|gb|EEO06082.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TM 11079-80]
          Length = 255

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|294625269|ref|ZP_06703908.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292600443|gb|EFF44541.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 268

 Score = 33.9 bits (76), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +  +G ALSDA   + +
Sbjct: 184 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 243

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 244 SVENSSSRRVVQGIVEASGTV 264


>gi|85712248|ref|ZP_01043299.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
           baltica OS145]
 gi|85693875|gb|EAQ31822.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
           baltica OS145]
          Length = 233

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G ++  S L +++V  S +R N     + ++G  T+R +     I         ++ 
Sbjct: 120 MQPGHLIAASDLTQVEVDVSQVRANLFEDNQLLIGSRTKRRVAAGKAIEA---RDTCLVC 176

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            G +V I+     + I+  G AL+D   G+ +AVKN+
Sbjct: 177 EGEQVTIVAKSKALKITATGEALADGLQGESVAVKNV 213


>gi|258621043|ref|ZP_05716077.1| flagellar protein, putative [Vibrio mimicus VM573]
 gi|258625271|ref|ZP_05720179.1| flagellar protein, putative [Vibrio mimicus VM603]
 gi|258582444|gb|EEW07285.1| flagellar protein, putative [Vibrio mimicus VM603]
 gi|258586431|gb|EEW11146.1| flagellar protein, putative [Vibrio mimicus VM573]
          Length = 255

 Score = 33.9 bits (76), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 196 IVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVKNDKSNRIIDAQVSGVGEVTV 253


>gi|167645395|ref|YP_001683058.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
           K31]
 gi|167347825|gb|ABZ70560.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
           K31]
          Length = 247

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + AGE++    L  ++V  S    +      D++G+  +R L       L  +  P VI 
Sbjct: 115 LAAGEIVQPEDLVWVKVAASP--SDSPRDADDLIGMTAKRPLRQGATASLRDVSTPQVIK 172

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
            G  V +    G + +S  G A+++ ++G+ + V+N
Sbjct: 173 AGDIVAVTYEDGGVALSLQGKAMANGAVGESLMVQN 208


>gi|262166287|ref|ZP_06034024.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           VM223]
 gi|262170819|ref|ZP_06038497.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|261891895|gb|EEY37881.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|262026003|gb|EEY44671.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           VM223]
          Length = 247

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ R   V I   +  M+I+T G A+SD  +G+ I VKN  +  ++   V   G V V
Sbjct: 188 IVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVKNDKSNRIIDAQVSGVGEVTV 245


>gi|146329931|ref|YP_001210239.1| BcepGomrgp19 [Burkholderia phage BcepGomr]
 gi|145321107|gb|ABP63590.1| BcepGomrgp19 [Burkholderia phage BcepGomr]
          Length = 669

 Score = 33.5 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 100 RIILTQGNMTIS--TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           RI    GN+ I   T G+A+   SIG+V+   +I TGV + GS   +GTV
Sbjct: 526 RIYRASGNVQIRGRTDGVAIPTGSIGEVLTFNSIPTGVPIGGS---SGTV 572


>gi|295688783|ref|YP_003592476.1| flagella basal body P-ring formation protein FlgA [Caulobacter
           segnis ATCC 21756]
 gi|295430686|gb|ADG09858.1| flagella basal body P-ring formation protein FlgA [Caulobacter
           segnis ATCC 21756]
          Length = 254

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLLPDHVIPLSVLHRPY 91
           + AGE++    L  +++      G  A + +D   V+GL  +R L     +    +    
Sbjct: 123 MTAGEIVQPEDLVWVKMA-----GAPADAPRDADAVIGLAAKRPLREGAAVSQRDVGAAQ 177

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
           V+  G  + +  + G +++S  G A+S AS G+V AV+N
Sbjct: 178 VVKTGDLITVTYSDGGISLSLQGKAMSAASTGEVFAVQN 216


>gi|220924577|ref|YP_002499879.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           nodulans ORS 2060]
 gi|219949184|gb|ACL59576.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           nodulans ORS 2060]
          Length = 343

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 40/83 (48%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VG V +R L P   +    L RP ++ RG  V I+     ++++  G A     +G V+
Sbjct: 246 LVGQVAQRALAPGQKLRAGDLARPELVQRGETVTILYEGPGVSLALRGQAKEGGPLGAVV 305

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
           AV N  +  ++  +V   G V V
Sbjct: 306 AVVNPVSKKVLQATVSGPGRVSV 328


>gi|21108208|gb|AAM36850.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 312

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   RR+L    ++  + L    ++ RG  V ++   G + +   G ALSDA   + +
Sbjct: 228 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERV 287

Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
           +V+N  +  +V G V  +GTV
Sbjct: 288 SVENSSSRRVVQGIVEASGTV 308


Searching..................................................done


Results from round 2




>gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040054|gb|ACT56850.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 152

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY
Sbjct: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA
Sbjct: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK
Sbjct: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152


>gi|325291938|ref|YP_004277802.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium sp. H13-3]
 gi|325059791|gb|ADY63482.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium sp. H13-3]
          Length = 162

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 1/149 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           VR  L  +  + ++   FA     A+VP+  I  GE +   ++K ++VTN NI   YA  
Sbjct: 15  VRMCLASAFSLGAMAPAFAQAP-TALVPTRTIYPGETITPEQVKPVEVTNPNISAGYASD 73

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+++++ LLP   IP++ L  P ++ RG  V+++   GNMT+  +G  +SD S+G
Sbjct: 74  ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           +V+ V+NID+GVMVSG+V+  GT++V+ K
Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162


>gi|148360444|ref|YP_001251651.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila str. Corby]
 gi|296106491|ref|YP_003618191.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148282217|gb|ABQ56305.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila str. Corby]
 gi|295648392|gb|ADG24239.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307609702|emb|CBW99212.1| hypothetical protein LPW_09931 [Legionella pneumophila 130b]
          Length = 233

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 76/150 (50%), Gaps = 4/150 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+     ++LY+    ++F SV    +V    +  G  ++ S + + ++    ++  Y
Sbjct: 87  IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
               K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  GIA+ + 
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++GD + VKN+ +  ++   V    TV+V+
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVI 232


>gi|54293884|ref|YP_126299.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila str. Lens]
 gi|53753716|emb|CAH15174.1| hypothetical protein lpl0940 [Legionella pneumophila str. Lens]
          Length = 233

 Score =  150 bits (380), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+     ++LY+    ++F SV    +V    +  G  ++ S + + ++    ++  Y
Sbjct: 87  IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
               K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  G+A+ + 
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGVAMDEG 202

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++GD + VKN+ +  ++   V    TV+V 
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVT 232


>gi|52841143|ref|YP_094942.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296929|ref|YP_123298.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           pneumophila str. Paris]
 gi|52628254|gb|AAU26995.1| flagella basal body P-ring formation protein FlgA [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750714|emb|CAH12121.1| hypothetical protein lpp0970 [Legionella pneumophila str. Paris]
          Length = 233

 Score =  150 bits (379), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+     ++LY+    ++F SV    +V    +  G  ++ S + + ++    ++  Y
Sbjct: 87  IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
               K+++GLV +  + P+  +    +    ++ +G +V II    N+T+S  GIA+ + 
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++GD + VKN+ +  ++   V    TV+V 
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVT 232


>gi|315121846|ref|YP_004062335.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495248|gb|ADR51847.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 149

 Score =  150 bits (379), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 103/149 (69%), Positives = 122/149 (81%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R       YV  L+++ A+ +G AVVPSVVINAGEVL+E +LKE+ VTNSN+RGNYA  
Sbjct: 1   MRLFQVCLFYVFCLNAVLANGLGRAVVPSVVINAGEVLSELKLKELDVTNSNLRGNYARY 60

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           IKDV GLVTRR LLPD +I LS LHRPYVISRG KVRIIL QGNMTIS AG+ALSDAS+G
Sbjct: 61  IKDVKGLVTRRTLLPDRIILLSALHRPYVISRGDKVRIILNQGNMTISAAGVALSDASVG 120

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           D I+VKNIDTGV+VSGS +D GTVR+++K
Sbjct: 121 DAISVKNIDTGVIVSGSALDAGTVRIIIK 149


>gi|2275162|gb|AAB81414.1| FlgA [Sinorhizobium meliloti]
          Length = 168

 Score =  148 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 1/149 (0%)

Query: 5   RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           R +LF ++    L    A      AV+P   I  GE L+ S L+ + VTN ++R  Y HS
Sbjct: 20  RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVHS 79

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+VT+R LLP  VI  S L   Y + RG+ VR++   G +TI+ AG  L DA++G
Sbjct: 80  IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 139

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           D+I V+N+DTGV+VSG+V+   T+ VV K
Sbjct: 140 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 168


>gi|218672800|ref|ZP_03522469.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli GR56]
          Length = 163

 Score =  146 bits (370), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 95/146 (65%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
               ++  + + +     +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  
Sbjct: 18  AAMIAVAGIVMPAGATPGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQ 77

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           V GLV++R LLP   I +S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I
Sbjct: 78  VEGLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLI 137

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVVK 152
             +N+D+GV+VSG+V+  GTV V  K
Sbjct: 138 RARNMDSGVIVSGTVLADGTVHVRAK 163


>gi|209547929|ref|YP_002279846.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533685|gb|ACI53620.1| flagella basal body P-ring formation protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 160

 Score =  146 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/130 (44%), Positives = 91/130 (70%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A +I  V GLV++R LLP   I
Sbjct: 31  AGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLSGDFAKTISQVEGLVSKRTLLPGRTI 90

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+
Sbjct: 91  SVSGLREPYTVTRGSSIRLVFSLGAMTISAAGSPLEDGATGQLIRARNMDSGVIVSGTVL 150

Query: 143 DTGTVRVVVK 152
             GTV V  K
Sbjct: 151 ADGTVHVRAK 160


>gi|15964416|ref|NP_384769.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium meliloti 1021]
 gi|17380481|sp|Q52947|FLGA_RHIME RecName: Full=Flagellar protein flgA; Flags: Precursor
 gi|15073593|emb|CAC45235.1| Flagellar precursor transmembrane protein [Sinorhizobium meliloti
           1021]
          Length = 168

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 5   RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           R +LF ++    L    A      AV+P   I  GE L+ S L+ + VTN ++R  Y  S
Sbjct: 20  RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRS 79

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+VT+R LLP  VI  S L   Y + RG+ VR++   G +TI+ AG  L DA++G
Sbjct: 80  IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 139

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           D+I V+N+DTGV+VSG+V+   T+ VV K
Sbjct: 140 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 168


>gi|190890364|ref|YP_001976906.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695643|gb|ACE89728.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 160

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 96/146 (65%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
               ++  + + +   + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  
Sbjct: 15  AAMIAVAGIMVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQ 74

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           V GLV++R LLP   I +S L  PY ++RG+ +R++ + G MTIS AG  L D + G +I
Sbjct: 75  VEGLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPLEDGATGQLI 134

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVVK 152
             +N+D+GV+VSG+V+  GTV V  K
Sbjct: 135 RARNMDSGVIVSGTVLADGTVHVRAK 160


>gi|307311558|ref|ZP_07591199.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti BL225C]
 gi|307318913|ref|ZP_07598344.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti AK83]
 gi|306895327|gb|EFN26082.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti AK83]
 gi|306899575|gb|EFN30204.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
           meliloti BL225C]
          Length = 157

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 5   RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           R +LF ++    L    A      AV+P   I  GE L+ S L+ + VTN ++R  Y  S
Sbjct: 9   RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRS 68

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+VT+R LLP  VI  S L   Y + RG+ VR++   G +TI+ AG  L DA++G
Sbjct: 69  IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 128

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           D+I V+N+DTGV+VSG+V+   T+ VV K
Sbjct: 129 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 157


>gi|86356313|ref|YP_468205.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli CFN 42]
 gi|86280415|gb|ABC89478.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 160

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 96/142 (67%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           ++  + L +   + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V GL
Sbjct: 19  AIAGMVLPADADAGMGYAVVPTTIIYPGDTLSGSQLQEVEVTNPNLAGDYAKSISQVEGL 78

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
           V++R LLP   I +S L  PY ++RG+ +R++ + G MTIS AG  L D + G V+  +N
Sbjct: 79  VSKRTLLPGRTISVSALREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQVVRARN 138

Query: 131 IDTGVMVSGSVVDTGTVRVVVK 152
           +D+GV+VSG+V+  GT+ V  K
Sbjct: 139 MDSGVIVSGTVLADGTIHVRAK 160


>gi|150395486|ref|YP_001325953.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium medicae WSM419]
 gi|150027001|gb|ABR59118.1| SAF domain protein [Sinorhizobium medicae WSM419]
          Length = 169

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGH-AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           VR +L  ++    L    A      AV+P   I  GE L+ S L+ + VTN ++R  Y  
Sbjct: 20  VRAVLLAAVASCMLPPASALAEKPTAVIPKQTIYPGETLDASMLEVVDVTNPDLRDGYVR 79

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S+ +V G+VT+R LLP  VI  S L   Y + RG+ VRI+ + G +TI+ AG  L D +I
Sbjct: 80  SLDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRIVFSNGGLTITAAGSPLQDGAI 139

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           G++I V+NIDTGV+VSG+V+   T+ VV K
Sbjct: 140 GELIRVRNIDTGVIVSGTVMADSTIHVVAK 169


>gi|159184363|ref|NP_353578.2| flagellar basal body P-ring biosynthesis protein FlgA
           [Agrobacterium tumefaciens str. C58]
 gi|3913663|sp|Q44339|FLGA_AGRT5 RecName: Full=Flagellar protein flgA; Flags: Precursor
 gi|1086562|gb|AAB68969.1| orfA; No significant homologies in the database; Method: conceptual
           translation supplied by author [Agrobacterium
           tumefaciens]
 gi|2459715|gb|AAB71791.1| FlgA [Agrobacterium tumefaciens]
 gi|159139677|gb|AAK86363.2| flagellar protein FLGA precursor [Agrobacterium tumefaciens str.
           C58]
          Length = 162

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 1/149 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           VR  L  S + L   +   +    A+VP   I  GE ++  ++K ++VTN NI   YA  
Sbjct: 15  VRMCLA-SAFSLGALAPALAQAPMALVPVRTIYPGEAISPEQVKSVEVTNPNISAGYASD 73

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I +V G+++++ LLP   IP++ L  P ++ RG  V+++   GNMT+  +G  +SD S+G
Sbjct: 74  ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           +V+ V+NID+GVMVSG+V+  GT++V+ K
Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162


>gi|227820859|ref|YP_002824829.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Sinorhizobium fredii NGR234]
 gi|227339858|gb|ACP24076.1| SAF domain protein [Sinorhizobium fredii NGR234]
          Length = 169

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/126 (44%), Positives = 81/126 (64%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            AV+P  +I  GE +  S L+ + VTN ++   Y  S+++V G VT+R LLP  VI  S 
Sbjct: 44  TAVIPKQIIYPGETIEASMLEVVDVTNPDLADGYIGSLEEVEGKVTKRTLLPGRVILASA 103

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L   Y + RG+ VR+I   G +TI+ AG  L DA++G++I  +NID+GV+VSG+V+  GT
Sbjct: 104 LRDRYAVERGSTVRLIFNNGGLTITAAGSPLEDAAVGELIRARNIDSGVIVSGTVMADGT 163

Query: 147 VRVVVK 152
           V VV K
Sbjct: 164 VHVVAK 169


>gi|222084866|ref|YP_002543395.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722314|gb|ACM25470.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 166

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/150 (40%), Positives = 101/150 (67%), Gaps = 3/150 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
            V F   FS     +D    + +G AVVP+ VI  G+++   +L+E+ VTN N+ G+YA 
Sbjct: 20  SVMFAPAFSAGATGVD---GTGMGTAVVPTEVIYPGDIIGSGQLEEVDVTNPNLSGDYAR 76

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +I+DV G V++R LLP   I +S L +P+ ++RG+  R++++ G+MTI+ AG  L D ++
Sbjct: 77  TIRDVTGRVSKRTLLPGRTISISALRQPFAVTRGSNARLVMSMGSMTITAAGTPLDDGAV 136

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           GD +  +N+D+G++V+G+V++ GT+RVV K
Sbjct: 137 GDSVRARNLDSGIIVNGTVLENGTIRVVSK 166


>gi|241203107|ref|YP_002974203.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856997|gb|ACS54664.1| flagella basal body P-ring formation protein FlgA [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 160

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 58/130 (44%), Positives = 91/130 (70%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V G+V++R LLP   I
Sbjct: 31  AGMGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTI 90

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +S L   Y ++RG+ +R++L+ G +TIS AG  L D + G V+  +N+D+GV+VSG+V+
Sbjct: 91  SVSGLREAYTVTRGSSIRLVLSFGALTISAAGTPLEDGTTGQVVRARNMDSGVIVSGTVL 150

Query: 143 DTGTVRVVVK 152
             GTV V  K
Sbjct: 151 ADGTVHVRAK 160


>gi|116250483|ref|YP_766321.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255131|emb|CAK06205.1| putative flagellar protein FlgA precursor [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 160

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/130 (46%), Positives = 92/130 (70%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G+YA SI  V G+V++R LLP   I
Sbjct: 31  AGMGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTI 90

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +S L   Y ++RG+ +R++L+ G MTIS AG  L D +IG V+  +N+D+GV+VSG+V+
Sbjct: 91  SVSGLREAYTVTRGSSIRLVLSLGAMTISAAGTPLEDGTIGQVVRARNMDSGVIVSGTVL 150

Query: 143 DTGTVRVVVK 152
             GTV V  K
Sbjct: 151 ADGTVHVRAK 160


>gi|77166141|ref|YP_344666.1| flageller protein FlgA [Nitrosococcus oceani ATCC 19707]
 gi|254435735|ref|ZP_05049242.1| SAF domain family [Nitrosococcus oceani AFC27]
 gi|76884455|gb|ABA59136.1| flagellar protein FlgA [Nitrosococcus oceani ATCC 19707]
 gi|207088846|gb|EDZ66118.1| SAF domain family [Nitrosococcus oceani AFC27]
          Length = 235

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+    S+  +V G  +V +  I++G  L+   L+  +   S +R  Y +     VG
Sbjct: 98  WTVYL----SVKMAVYGKVLVATHSISSGFPLSLVDLRLERRDLSELRQGYLNEPAQAVG 153

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I   +L  P +I RG +V ++ T   + ++  G AL DA  G+ I V+
Sbjct: 154 KRLKRPVGLGAIITPGMLEIPKLIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVR 213

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  +V G+V   G V+V +
Sbjct: 214 NTSSRRIVEGTVTAAGLVQVQM 235


>gi|330501133|ref|YP_004378002.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328915419|gb|AEB56250.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 234

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+  L   S+F  V    V  + VI  G+ ++  +L+  +V        + +S  +VVG
Sbjct: 96  WSVTALVQASVFLPV----VHAARVIERGQTISAEQLQLQEVNIGKAPRGFYNSFDEVVG 151

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I  ++L  P +I RG +V I+ +Q  ++ S  G AL++   GDVI V+
Sbjct: 152 QGAKRRVRAGQLIAPNLLTAPLLIRRGQQVTIVASQDGISASATGEALANGREGDVIRVR 211

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +  ++   VV+ G V
Sbjct: 212 NLGSQKVIEAQVVEDGVV 229


>gi|222147572|ref|YP_002548529.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
 gi|221734560|gb|ACM35523.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
          Length = 159

 Score =  139 bits (350), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/126 (46%), Positives = 91/126 (72%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           +A+VP+  I  GE ++ ++L  +QVTN N+ G +A  + DVVG+++ + LLP   IPL+ 
Sbjct: 34  YAIVPTDTIYPGEAISSNKLDRVQVTNPNLAGGFASDMADVVGMLSTKTLLPGRTIPLAT 93

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L RPY + RG+++R+I   GN+TIS +G  + DA+IGDVI V+N+D+G +VSG+V+  GT
Sbjct: 94  LKRPYAVIRGSQLRLIFNIGNLTISASGSPMDDANIGDVIRVRNLDSGQIVSGTVMGDGT 153

Query: 147 VRVVVK 152
           V+V+ K
Sbjct: 154 VQVMAK 159


>gi|327478805|gb|AEA82115.1| SAF domain-containing protein [Pseudomonas stutzeri DSM 4166]
          Length = 267

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++L V S  S++      AV    +I  G+ L    L+   +     +  Y H +++V G
Sbjct: 130 WTLEVTSQPSVWLP----AVHAQGIIERGQTLGRDDLRLEPINIGKAQRGYFHRLEEVQG 185

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  +R +     +  S+L +P  + RG  V+I+ +   +  ST G AL+D   G+VI V+
Sbjct: 186 MAAKRRIRAGQTLTPSLLAQPLAVRRGQPVKIVASHDGIEASTNGEALADGQPGEVIRVR 245

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +G ++   VV+ G V
Sbjct: 246 NVRSGKVIDAKVVEEGVV 263


>gi|157147106|ref|YP_001454425.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
           koseri ATCC BAA-895]
 gi|157084311|gb|ABV13989.1| hypothetical protein CKO_02883 [Citrobacter koseri ATCC BAA-895]
          Length = 263

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V    V+    +  G+VL+ S +   ++  S+ RGNY     + +G
Sbjct: 122 WDVAVTVKPDVYLPV----VIAKNSLERGQVLSASDVSIKKLNISSTRGNYLTDPDEAIG 177

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L  +R +     I L+ L  P ++ RG +V +I  QG +   T G A+     G++I VK
Sbjct: 178 LTVKRRIRELQPITLTQLESPVLVERGQRVLMIAEQGGVEARTMGEAMKKGRKGEMIKVK 237

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  +VS  V D G V++V 
Sbjct: 238 NESSERVVSAIVADAGVVKMVY 259


>gi|300113144|ref|YP_003759719.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           watsonii C-113]
 gi|299539081|gb|ADJ27398.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           watsonii C-113]
          Length = 235

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+    S+  +V G  +V +  I++G  LN + ++  +   S +R  Y +     VG
Sbjct: 98  WTVYL----SVKMAVYGKVLVATHSISSGFPLNLADMRLERRDLSELRQGYLNEPAQAVG 153

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I   +L  P +I RG +V ++     + ++  G AL DA  G+ I V+
Sbjct: 154 KRLKRPVGLGAIITPGMLETPKLIRRGQQVILMAKVPGLRVNMKGQALEDAGAGEHIRVR 213

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  +V G+V   G V+V +
Sbjct: 214 NTSSQRIVEGTVTAAGLVQVQM 235


>gi|163758016|ref|ZP_02165104.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
           phototrophica DFL-43]
 gi|162284305|gb|EDQ34588.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
           phototrophica DFL-43]
          Length = 160

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 77/127 (60%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G AVVP   I  GE L+   ++E+ VTN N+RG Y  +   V+G VT R LLP   IP  
Sbjct: 34  GTAVVPERTIYPGEELSAELVREVTVTNPNLRGGYVTTTTGVLGKVTTRTLLPGRTIPAG 93

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           VL   + + RG  V ++ +   +TI+ AG  L + ++GD I V+NI++GV VSG+V+  G
Sbjct: 94  VLRDAWAVERGTTVELVFSGKGLTITAAGTPLQNGAVGDFIRVRNIESGVTVSGTVMADG 153

Query: 146 TVRVVVK 152
           T++V  K
Sbjct: 154 TIQVAPK 160


>gi|292490649|ref|YP_003526088.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           halophilus Nc4]
 gi|291579244|gb|ADE13701.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
           halophilus Nc4]
          Length = 221

 Score =  134 bits (338), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+    S+  +V G  VV +  +  G  L+ + +   +     +R  Y      V G
Sbjct: 84  WTVYL----SVKVAVYGKVVVATHPLVPGSPLSLADIHLERRNLEQLRQGYLRDPAQVAG 139

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R L    VI   VL  P ++ RG +V +I     + +   G AL DA  G+ I V+
Sbjct: 140 KRLKRPLGLGAVITPEVLEIPKLVRRGQQVILIAKVPGLQVHMKGQALEDAGAGEHIRVR 199

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  +V G+V   G V+V +
Sbjct: 200 NNSSQRIVEGTVTADGIVQVQM 221


>gi|291085839|ref|ZP_06354200.2| putative flagellar protein [Citrobacter youngae ATCC 29220]
 gi|291070006|gb|EFE08115.1| putative flagellar protein [Citrobacter youngae ATCC 29220]
          Length = 260

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 63/134 (47%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++   V    V+P  +I    V+    L+  +   SN R     ++ + +GL ++R L 
Sbjct: 125 VAVRPDVSIPVVMPKSLIARDTVITADDLQLKKFNISNQREGLMTNMDEAIGLTSKRALQ 184

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
           P   I  S L  P ++ R   V I+     +T S  G+AL +   G+VI ++N  +  ++
Sbjct: 185 PGKPITRSELVLPVLVKRDQPVMIVSHMAGITASMPGVALKNGRKGEVIKIRNSSSQRII 244

Query: 138 SGSVVDTGTVRVVV 151
           SG V DTG V  + 
Sbjct: 245 SGVVDDTGVVTTLA 258


>gi|254497119|ref|ZP_05109939.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           drancourtii LLAP12]
 gi|254353657|gb|EET12372.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
           drancourtii LLAP12]
          Length = 246

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 4/150 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C      +SLYV    ++  +V     +    +  GE ++   + + ++    ++  Y
Sbjct: 100 IKCQEQDNHWSLYVPIRVTILKTV----YIARRALMKGEHISGHDMYQAEIDVHKLKNGY 155

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              I ++VG V ++ +  +       +  P V+ +G KV I+    N+T+S  GIA++D 
Sbjct: 156 FEDIDELVGRVCKQNIAINSPFNPHNIELPKVVRKGEKVAIVTNNNNLTVSMDGIAINDG 215

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++G+ I VKN+ +  ++   V     V VV
Sbjct: 216 AMGETIKVKNLVSKRIIEAQVAGKKRVTVV 245


>gi|182680547|ref|YP_001834693.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182636430|gb|ACB97204.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 166

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAV----VPSVVINAGEVLNESRLKEMQV--TNS 54
           +  +RFL       LS  S    V         VP+  I  G+ + E+ + E +    ++
Sbjct: 9   ISSLRFLPLGVAACLSTLSAVHPVEASDALVLPVPTTTIYPGDTIKEAWIIEREFAANST 68

Query: 55  NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
             RGN       +VG   RR LLP   IP++ L  P  +  GAKVRI+  +  +TI+  G
Sbjct: 69  YARGNVLTERAALVGKAARRTLLPGVPIPINALSEPKAVLNGAKVRIVFMESGLTITAFG 128

Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            AL   S+GD ++V+N+D+G+ VSG V   G++RV
Sbjct: 129 SALQSGSVGDNVSVRNLDSGLTVSGIVQADGSIRV 163


>gi|319405402|emb|CBI79021.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
           AR 15-3]
          Length = 152

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTR 73
             L + +A  I   +VP   I AG+ +++  L E      S+    Y   +K ++  V +
Sbjct: 16  CLLTAAYADRISF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAASLYVMDMKQILHKVAK 74

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           R L     I LS L  P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+
Sbjct: 75  RTLTAGRPISLSSLGDPVLVERGQATKLIFQAHNLQITALGVVLQSGSSGDVIRVRNSDS 134

Query: 134 GVMVSGSVVDTGTVRV 149
           G +V+G+V+  G VRV
Sbjct: 135 GRVVTGTVLQNGDVRV 150


>gi|289208108|ref|YP_003460174.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
           sp. K90mix]
 gi|288943739|gb|ADC71438.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
           sp. K90mix]
          Length = 244

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
            + +S+YV      +A V    +V S  +     +    L+  ++  S   G+Y  S  +
Sbjct: 104 PVSWSIYVPVTVERYAEV----LVASRTLRRQHTILPGDLRTKRIQTSRHAGSYFESKNE 159

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VGL TRR +    ++    + +  V+SRG +V I+   G++ I   G AL +  +GD I
Sbjct: 160 LVGLQTRRNIRSGQILGQQHVTQREVVSRGQRVTILAENGSVVIRMQGEALENGILGDRI 219

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            VKN  +G +V G V+++G VRV 
Sbjct: 220 RVKNSSSGRVVEGEVLESGHVRVA 243


>gi|238762363|ref|ZP_04623334.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           kristensenii ATCC 33638]
 gi|238699348|gb|EEP92094.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           kristensenii ATCC 33638]
          Length = 249

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V     V    +  G+++    ++  +   S  +G Y  +  ++VG
Sbjct: 108 WEVSVTVKPDIYLPVW----VAKSTLERGKLVAPDDIELKKKNISTAQGGYITNPDEIVG 163

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L  +R +    V+  S L +P +++RG +V +I  Q  +     G AL +   G++I VK
Sbjct: 164 LTVKRRIRGLQVVTPSQLEQPVLVTRGQQVLMIAEQEGIEARMLGEALKNGRKGELIKVK 223

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N+ +   V+  V D   VR++
Sbjct: 224 NLSSKRTVTAIVDDIARVRML 244


>gi|318604248|emb|CBY25746.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 234

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V     V    +  G+++    ++  +   S  +G Y     ++VG
Sbjct: 93  WEVAVTVKPDIYLPVW----VAKNTLERGKLVAPDDIELKKKNISTAQGGYITDPDEIVG 148

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  S L +P +++RG +V +I  Q  +     G AL +   G++I VK
Sbjct: 149 FTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVK 208

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +   V+  V D   VR++
Sbjct: 209 NISSKRTVTAMVDDVAKVRML 229


>gi|319898638|ref|YP_004158731.1| flagella basal body P-ring formation protein FlgA [Bartonella
           clarridgeiae 73]
 gi|319402602|emb|CBI76147.1| Flagella basal body P-ring formation protein FlgA [Bartonella
           clarridgeiae 73]
          Length = 152

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLL 77
           + +A  IG  +VP   I AG+ +++  L E      S+    Y   +K ++  V +R L 
Sbjct: 20  TAYADRIGF-LVPDKSIYAGQRISDIGLSERHFFIKSDAASLYVTDMKQILHKVAKRTLT 78

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
               I LS L  P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+G +V
Sbjct: 79  AGRPIALSSLGDPVLVERGQATKLIFQTHNLKITALGVVLQSGSSGDVIRVRNSDSGRVV 138

Query: 138 SGSVVDTGTVRV 149
           +G+V+  G VRV
Sbjct: 139 TGTVLQNGDVRV 150


>gi|238752870|ref|ZP_04614335.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
           ATCC 43380]
 gi|238708909|gb|EEQ01162.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
           ATCC 43380]
          Length = 215

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V     V    +  G+V+  S ++  +   S  +G+Y  +  ++VG
Sbjct: 74  WEVAVTVKPDIYLPVW----VAKNTLERGKVVAPSDIELKKKNISAAQGSYITNPDEIVG 129

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    ++  + L +P +++RG  V +I  Q  +     G AL +   G++I VK
Sbjct: 130 FTVKRRIRNLQIVTSAQLEQPVLVTRGQHVVMIAEQDGIEARMLGEALKNGRKGELIKVK 189

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N+ +   +S  V D G VR++
Sbjct: 190 NLSSKRTISAIVEDIGKVRML 210


>gi|108809059|ref|YP_652975.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Antiqua]
 gi|108810744|ref|YP_646511.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Nepal516]
 gi|167398491|ref|ZP_02304015.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|21960413|gb|AAM87006.1|AE013948_14 putative flagellar protein [Yersinia pestis KIM 10]
 gi|45437658|gb|AAS63208.1| putative flagellar protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774392|gb|ABG16911.1| flagella basal body P-ring formation protein [Yersinia pestis
           Nepal516]
 gi|108780972|gb|ABG15030.1| putative flagella basal body P-ring formation protein [Yersinia
           pestis Antiqua]
 gi|167050995|gb|EDR62403.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
          Length = 305

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 166 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 225

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 226 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 285

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 286 VVTATVDGSGRVRML 300


>gi|145597813|ref|YP_001161889.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Pestoides F]
 gi|145209509|gb|ABP38916.1| flagella basal body P-ring formation protein [Yersinia pestis
           Pestoides F]
          Length = 305

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 166 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 225

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 226 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 285

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 286 VVTATVDGSGRVRML 300


>gi|146281765|ref|YP_001171918.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           stutzeri A1501]
 gi|145569970|gb|ABP79076.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           stutzeri A1501]
          Length = 250

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S++V +   L+  VI    V +  +     L+E+ +   +   SN+   Y   + +V+G
Sbjct: 113 WSVFVPAQVRLYRQVI----VANRSLLRDSRLSEADVSLAERDVSNLTQGYLTRMDEVLG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R + PD VI  + +    V+ +G +V I    G + +   G A++D + G  I VK
Sbjct: 169 NKLTRPVQPDQVIAPNQMELAEVVRKGDQVVITARSGAINVRMPGEAMADGAPGKQIPVK 228

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +G +V   V+  G V V +
Sbjct: 229 NQRSGRVVKARVIGPGHVEVAM 250


>gi|192358836|ref|YP_001982407.1| putative flagella basal body P-ring formation protein FlgA
           [Cellvibrio japonicus Ueda107]
 gi|190685001|gb|ACE82679.1| putative flagella basal body P-ring formation protein FlgA
           [Cellvibrio japonicus Ueda107]
          Length = 256

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++L++ +  S+F S+     V    +  GE ++ S ++   +  S +R +Y    K+++G
Sbjct: 120 WTLHIPAQVSVFRSIP----VAMRDLARGEQISASDIQWETINISLLRQSYLLETKEIIG 175

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L  +R +        + L  P VI RG  V +  + G + +S +G AL+D  +G  I V+
Sbjct: 176 LEVKRNIGLGSPFLSASLDAPKVIYRGETVDLESSVGGINVSASGTALADGRLGQKIRVR 235

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N  +  +V+G+VV +G V
Sbjct: 236 NNQSDRVVTGTVVASGKV 253


>gi|332162905|ref|YP_004299482.1| flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667135|gb|ADZ43779.1| Flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863355|emb|CBX73478.1| hypothetical protein YEW_ES20730 [Yersinia enterocolitica W22703]
          Length = 234

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V     V    +  G+++    ++  +   S  +G Y     ++VG
Sbjct: 93  WEVAVTVKPDIYLPVW----VAKNTLERGKLVVPDDIELKKKNISTAQGGYITDPDEIVG 148

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  S L +P +++RG +V +I  Q  +     G AL +   G++I VK
Sbjct: 149 FTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVK 208

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +   V+  V D   VR++
Sbjct: 209 NISSKRTVTAMVDDVAKVRML 229


>gi|319406977|emb|CBI80614.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
           1-1C]
          Length = 152

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLL 77
           + +A  IG  +VP   I AG+ +++  L E      S+    Y   +K ++  V +R L 
Sbjct: 20  AAYADRIGF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAVSLYVTDMKQILHKVAKRTLT 78

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
               I LS L  P ++ RG   ++I    N+ I+  G+ L   S GDVI V+N D+G +V
Sbjct: 79  AGRPISLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQSGSSGDVIRVRNSDSGRVV 138

Query: 138 SGSVVDTGTVRV 149
           +G+V+  G VRV
Sbjct: 139 TGTVLQNGDVRV 150


>gi|126668330|ref|ZP_01739289.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
           ELB17]
 gi|126627247|gb|EAZ97885.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
           ELB17]
          Length = 263

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S    + G A+V S  +  GE L    +    V  +  R       + ++G+  RR +  
Sbjct: 131 SATVDIHGPALVASRPLARGERLRADMVSLQTVVVNASRRGTIAEAQSIIGMEVRRPINS 190

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             +I   +L  P  + RG  V I  + G+ T+S+ G AL++A+IG+ + V+N+ +   + 
Sbjct: 191 GSLITPDLLAAPDAVERGDHVMITASSGSFTVSSRGKALANAAIGEQVLVENLQSSRTIK 250

Query: 139 GSVVDTGTVRVVV 151
           G V   G V++ +
Sbjct: 251 GRVTAPGQVQIPM 263


>gi|254785365|ref|YP_003072794.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
           turnerae T7901]
 gi|237683904|gb|ACR11168.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
           turnerae T7901]
          Length = 228

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV      F  V    V+ +  I  G  +    +   ++  S++ G Y      VVG
Sbjct: 90  WTIYVPVQVETFEEV----VIAAGAIGRGAQITAGDVVTQRMNTSHLTGGYLRDPARVVG 145

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L  RR+L P  +I L+ +  P V+ +G  V +      + + T   AL++  +G+ I V+
Sbjct: 146 LEARRMLRPGEIIKLNQVKAPDVVKKGQTVVLEARSSALRVVTEATALTNGGVGEQIKVR 205

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  +V   V   GTVRV 
Sbjct: 206 NNRSQRIVDAQVTGPGTVRVA 226


>gi|163750576|ref|ZP_02157814.1| flagellar basal body P-ring biosynthesis protein [Shewanella
           benthica KT99]
 gi|161329731|gb|EDQ00720.1| flagellar basal body P-ring biosynthesis protein [Shewanella
           benthica KT99]
          Length = 234

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV    +  G+++ +  +    V  + +RG    ++ 
Sbjct: 100 WQIFISVRVDILYPV--------VVARATLGPGDLITKGDIVIKYVEQTLLRGRQFSNLD 151

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +VVG   +R + P+  I  + L     + +G  V II    N  I T G AL D ++GD 
Sbjct: 152 EVVGTRAKRRIAPNQPIFSNNL---CFVCKGDSVSIIARTENFQIKTVGEALQDGNLGDR 208

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   V+  V+D G V V +
Sbjct: 209 IRIKNTYSNKRVNARVIDVGKVEVRM 234


>gi|146305246|ref|YP_001185711.1| SAF domain-containing protein [Pseudomonas mendocina ymp]
 gi|145573447|gb|ABP82979.1| SAF domain protein [Pseudomonas mendocina ymp]
          Length = 281

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 66/131 (50%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           +  + ASV   AV  + VI  G+ +   +++  +V        +  S+ +VVG   +R +
Sbjct: 146 VALVQASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSSRGFYSSLDEVVGQGAKRRI 205

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               +I  S+L  P ++ RG +V I+  Q  ++ S  G AL +   G+VI V+N+ +  +
Sbjct: 206 RAGALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKV 265

Query: 137 VSGSVVDTGTV 147
           +   VV+ G V
Sbjct: 266 IEAQVVEEGVV 276


>gi|121997325|ref|YP_001002112.1| SAF domain-containing protein [Halorhodospira halophila SL1]
 gi|121588730|gb|ABM61310.1| SAF domain [Halorhodospira halophila SL1]
          Length = 262

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV    +L   +    VV +  +  G+ ++   L+        IRG +      ++G
Sbjct: 124 WTVYVRMETTLKTEM----VVATRNLRRGQRVSAGDLRTATRDARRIRGEFYRDPAPLIG 179

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN-MTISTAGIALSDASIGDVIAV 128
              RR L     I  + +  P ++ R  +V I    G  + IS+ G AL     G+ I V
Sbjct: 180 QAVRRSLREGAAITGNHVQPPRLVERNDRVTITAGNGGAIQISSRGRALEHGQEGERIRV 239

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
           +N+D+G  +   VV  G VRV
Sbjct: 240 ENLDSGREIQARVVGEGQVRV 260


>gi|153950687|ref|YP_001399630.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
 gi|152962182|gb|ABS49643.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
          Length = 272

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 133 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 192

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 193 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 252

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 253 VVTATVDGSGRVRML 267


>gi|150260253|ref|ZP_01916981.1| lateral flagellar P-ring addition protein [Yersinia pestis
           CA88-4125]
 gi|162419782|ref|YP_001604851.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Angola]
 gi|165925092|ref|ZP_02220924.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939099|ref|ZP_02227651.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008979|ref|ZP_02229877.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211927|ref|ZP_02237962.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167418801|ref|ZP_02310554.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425137|ref|ZP_02316890.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167466345|ref|ZP_02331049.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis FV-1]
 gi|229837404|ref|ZP_04457567.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Pestoides A]
 gi|229840617|ref|ZP_04460776.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842832|ref|ZP_04462984.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229900941|ref|ZP_04516065.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Nepal516]
 gi|294502784|ref|YP_003566846.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Z176003]
 gi|149289661|gb|EDM39738.1| lateral flagellar P-ring addition protein [Yersinia pestis
           CA88-4125]
 gi|162352597|gb|ABX86545.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Angola]
 gi|165913055|gb|EDR31680.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923292|gb|EDR40443.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992318|gb|EDR44619.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206673|gb|EDR51153.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962795|gb|EDR58816.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167055900|gb|EDR65681.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229682280|gb|EEO78372.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Nepal516]
 gi|229690099|gb|EEO82156.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696983|gb|EEO87030.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705527|gb|EEO91537.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
           Pestoides A]
 gi|262360816|gb|ACY57537.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           D106004]
 gi|262364761|gb|ACY61318.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           D182038]
 gi|294353243|gb|ADE63584.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Z176003]
 gi|320016715|gb|ADW00287.1| Flagellar basal-body P-ring formation proteinflgA [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 282

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 143 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 202

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 203 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 262

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 263 VVTATVDGSGRVRML 277


>gi|212634342|ref|YP_002310867.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           piezotolerans WP3]
 gi|212555826|gb|ACJ28280.1| Flagellar basal-body P-ring formation protein FlgA [Shewanella
           piezotolerans WP3]
          Length = 237

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV    +  G++L+ S ++   V  + +RG     + 
Sbjct: 103 WQIFLSVRVDILYPV--------VVAKSTLGPGDLLSSSDVEIDYVEQTTLRGQQFDQVD 154

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            VVG   +R + P   I  + L    ++ +G  V I     N  I T G AL D ++GD 
Sbjct: 155 QVVGARLKRRVAPQQPIFNNHL---CIVCKGDTVSIFARSENFEIKTVGEALHDGNLGDK 211

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   ++  V   G V V +
Sbjct: 212 IRIKNTHSQKTLNAKVTAVGQVEVRM 237


>gi|170022967|ref|YP_001719472.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|186896775|ref|YP_001873887.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590923|emb|CAH22579.1| Putative flagella basal body P-ring formation protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|169749501|gb|ACA67019.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|186699801|gb|ACC90430.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
          Length = 272

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 133 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 192

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 193 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 252

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 253 VVTATVDGSGRVRML 267


>gi|288940403|ref|YP_003442643.1| flagella basal body P-ring formation protein FlgA [Allochromatium
           vinosum DSM 180]
 gi|288895775|gb|ADC61611.1| flagella basal body P-ring formation protein FlgA [Allochromatium
           vinosum DSM 180]
          Length = 245

 Score =  128 bits (322), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 4/145 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
            + +SL+V +       V    VV    I+  +V+    ++  +   S +   Y     D
Sbjct: 105 PVSWSLFVPARIERHLPV----VVLERPISRQQVIGPDDIRIERQAVSTLTNGYFTEASD 160

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           VVGL +RR L+P  V+  + + +  ++ RG +V +   +  + +   G AL +   G+ I
Sbjct: 161 VVGLASRRRLMPGQVLTSAHVTQRRIVERGQEVTLFSARPGLVVRMKGTALENGVEGERI 220

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
            V+N  +  +V G V  +G VRV +
Sbjct: 221 RVRNTSSKRIVEGYVEPSGAVRVAL 245


>gi|23092309|gb|AAN08634.1| FlgA [Aeromonas hydrophila]
          Length = 339

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LY+    S+        V  S  +  G++L+E  L       + IRG+Y      ++G
Sbjct: 205 WDLYLPVRVSIQKP----YVTVSAPVAKGDILSEGMLTLAYQDQTLIRGDYLSDPTPLIG 260

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + ++R L P   I L+ +    V+ +G +V +     +M I T   AL D S GD+I + 
Sbjct: 261 VRSKRELKPGQPIRLTQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 317

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +G  V G V   G V V 
Sbjct: 318 NIRSGKTVQGKVSAVGAVVVT 338


>gi|261341498|ref|ZP_05969356.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316294|gb|EFC55232.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
          Length = 261

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + + V     ++  V    ++    +  G V+  S +   +   SN+R  Y     DVVG
Sbjct: 120 WDIAVTVKPDIYLQV----LMAKNTLERGHVMTASDITRRKFNISNLRSGYITRPDDVVG 175

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L  +R +     + LS L  P ++ RG +V +I  Q  +   T GIA      G++I VK
Sbjct: 176 LTLKRRIRELQPLSLSQLDSPVMVERGQRVLMIADQDGVEARTMGIASKKGRKGEMIKVK 235

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +   V+  V+D G VR 
Sbjct: 236 NESSEREVTAMVIDMGVVRT 255


>gi|311694437|gb|ADP97310.1| flagella basal body P-ring formation protein FlgA [marine bacterium
           HP15]
          Length = 222

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 63/135 (46%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
             +   S+ G A+V +  +  GE + E  L +  V  ++ R       K  +G+  RR +
Sbjct: 88  FVTASVSIHGPALVAARPLTRGERITEGLLAKQSVEINSSRRGVITDSKQAIGMEVRRAV 147

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++   +L  P  + RG  V I    G  ++ + G AL+ AS+G+ + V+N+ +   
Sbjct: 148 NAGSLVTPDMLSAPNAVERGDHVIITAKTGGFSVRSRGKALASASVGEQVLVENLRSSRT 207

Query: 137 VSGSVVDTGTVRVVV 151
           +  SVV  G V + +
Sbjct: 208 IRASVVAPGHVEIPM 222


>gi|170725949|ref|YP_001759975.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           woodyi ATCC 51908]
 gi|169811296|gb|ACA85880.1| flagella basal body P-ring formation protein FlgA [Shewanella
           woodyi ATCC 51908]
          Length = 235

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV    +  G++L+   +    V  +N+RG     IK
Sbjct: 101 WQIFLSVRVDILYPV--------VVARETLGPGDLLSNDDVIIEYVDRTNLRGQQFDDIK 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            VVG   +R + P+  I  S L     + +G  V I     N+ I T G AL D ++GD 
Sbjct: 153 QVVGTRVKRRIPPNQPIFSSNL---CFVCKGDTVSIYARSANVVIKTVGEALRDGNLGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   +  +V   G V V +
Sbjct: 210 IRIKNTHSNKSLHATVTGVGEVEVRM 235


>gi|157961165|ref|YP_001501199.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           pealeana ATCC 700345]
 gi|157846165|gb|ABV86664.1| SAF domain protein [Shewanella pealeana ATCC 700345]
          Length = 257

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV    +  G++L    ++   +  SN+RG     I 
Sbjct: 123 WQIFLSVRVDILYPI--------VVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEIS 174

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            VVG   +R + P   I  + L    ++ +G  V I     N  I T G AL D ++GD 
Sbjct: 175 QVVGARLKRRVAPGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDK 231

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   +   V   G V V +
Sbjct: 232 IRIKNSHSHKKLDARVTGVGQVEVRM 257


>gi|13472577|ref|NP_104144.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Mesorhizobium loti MAFF303099]
 gi|14023323|dbj|BAB49930.1| flagellar protein; FlgA [Mesorhizobium loti MAFF303099]
          Length = 174

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++P+ VI  GE +  + LK++ +     + +  A   +++ G + +R LLP   IP + 
Sbjct: 49  VLIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAA 108

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +   +++ +GA V++    G +TI+   + L   S GD+I V+N D+G ++SG+V+  GT
Sbjct: 109 IREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGT 168

Query: 147 VRVVV 151
           ++V  
Sbjct: 169 IQVSA 173


>gi|323139655|ref|ZP_08074697.1| flagella basal body P-ring formation protein FlgA [Methylocystis
           sp. ATCC 49242]
 gi|322395087|gb|EFX97646.1| flagella basal body P-ring formation protein FlgA [Methylocystis
           sp. ATCC 49242]
          Length = 159

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGN-YA 61
           VR   FF +  ++L  + A      V VP V I  G+ + +  L+E      N       
Sbjct: 9   VRSFTFFVVASMTLTLVAARAQESQVPVPRVTIYPGDQITDQVLEEKNYRLPNGADALVF 68

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S   +VG V RR LLP   IP   +  P+V+  GA+VRI+ ++G M I+T G+A    +
Sbjct: 69  LSRTGLVGKVARRTLLPGQPIPTIAVDNPHVVKVGAQVRIVFSEGGMQITTYGVAQQSGA 128

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +GDVI V+N ++G+ +SG V   G++ V
Sbjct: 129 VGDVIRVRNQESGLFISGRVQSDGSILV 156


>gi|149374965|ref|ZP_01892738.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
           algicola DG893]
 gi|149360854|gb|EDM49305.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
           algicola DG893]
          Length = 234

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 66/133 (49%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
            +  ++ G A+V +  +  GE L ++ ++   V  ++IR     +I+ +VG+  RR +  
Sbjct: 102 PVSVTITGDAMVAARPLGRGERLTKAAIRSDNVVVNSIRRGAITNIEQLVGMEMRRGVNT 161

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             V    ++  P  I RG  V I    GN ++++ G AL+  SIG+ + V+N+ +   V 
Sbjct: 162 GTVFTPDLVLAPAAIERGDHVIISARSGNFSVNSRGKALASGSIGEQVLVENLSSSRTVR 221

Query: 139 GSVVDTGTVRVVV 151
             V   G V + +
Sbjct: 222 ARVTAPGHVEIPM 234


>gi|161484755|ref|NP_670755.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis KIM 10]
 gi|161511337|ref|NP_994331.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis biovar Microtus str. 91001]
 gi|161760560|ref|YP_071832.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
 gi|218927908|ref|YP_002345783.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis CO92]
 gi|270487677|ref|ZP_06204751.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|115346519|emb|CAL19395.1| putative flagella basal body P-ring formation protein [Yersinia
           pestis CO92]
 gi|270336181|gb|EFA46958.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
          Length = 237

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 63/135 (46%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
            + ++   +     V    +  G  +    ++  +   + ++G Y     +++GL  +R 
Sbjct: 98  VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 157

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +     +  S L +P +++R   V ++  Q  +     GIA  +   G++I VKN+ +G 
Sbjct: 158 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 217

Query: 136 MVSGSVVDTGTVRVV 150
           +V+ +V  +G VR++
Sbjct: 218 VVTATVDGSGRVRML 232


>gi|258622484|ref|ZP_05717506.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
 gi|262173350|ref|ZP_06041027.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|258585184|gb|EEW09911.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
 gi|261890708|gb|EEY36695.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
          Length = 265

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ + +    VV    +   E +  S LK  + T +  + ++  + + V+GL T R + 
Sbjct: 133 VTIKSVLTLPVVVAKTTLRRDETIQASDLKIEKRTLTR-QEDFYTNTQQVIGLETTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              ++  ++L    ++ +G +V II ++   T +T GIAL     G  I V+N  +G ++
Sbjct: 192 SGQIVSPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V D   V  
Sbjct: 252 RAVVTDLNQVHT 263


>gi|119477961|ref|ZP_01618061.1| flagellar basal body P-ring biosynthesis protein [marine gamma
           proteobacterium HTCC2143]
 gi|119448874|gb|EAW30116.1| flagellar basal body P-ring biosynthesis protein [marine gamma
           proteobacterium HTCC2143]
          Length = 237

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +SLY+    +L+  V    V   + I  G ++    L+  ++  S + G Y  S   V+
Sbjct: 99  LWSLYIPVDVNLYKPV----VTAIIPIAKGSIVTRESLEMREMNISKLTGTYFVSSDAVI 154

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G+  +R L  +  +  + L +P +I RG  V +    GN+ +   GIAL++   G  I++
Sbjct: 155 GMQAKRPLRANAPVIATHLQQPLLIKRGESVVMTARSGNLVVKIPGIALTNGHRGQQISI 214

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           +N  +  +V G V   G V +V+
Sbjct: 215 RNSQSKRIVEGKVSAQGQVMIVM 237


>gi|157376222|ref|YP_001474822.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sediminis HAW-EB3]
 gi|157318596|gb|ABV37694.1| SAF domain protein [Shewanella sediminis HAW-EB3]
          Length = 259

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V         V+   VV    +   ++++   +    V  +++RG     I+
Sbjct: 125 WQIFLSVRV--------DVLYPVVVSRETLGPDDLISSGDVAIQYVEQTSLRGQQFDKIE 176

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           DVVG   +R + P+  I ++ L     + +G  V I     N  I T G AL D ++GD 
Sbjct: 177 DVVGTRVKRRIPPNQPIFINNL---CFVCKGDTVSIFARSKNFEIKTVGEALRDGNLGDR 233

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   +   V   G V V +
Sbjct: 234 IRIKNSYSNKSLDAKVTGVGEVEVRM 259


>gi|1272364|gb|AAA97472.1| LfgA [Vibrio parahaemolyticus]
          Length = 235

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  ++LK    T S    ++    K  +GL T R L 
Sbjct: 103 VTIKSSVTLPVVVAATTVGRSEVVTANQLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 161

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 162 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 221

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 222 RAVVTGRNQVHT 233


>gi|145298485|ref|YP_001141326.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851257|gb|ABO89578.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 339

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LY+    S+        V  +  +  G++L+ES L       + IRG+Y      ++G
Sbjct: 205 WDLYLPVRVSIQKP----YVTVATPVAKGDILSESVLTLAYQDQTQIRGDYLSDQAPLIG 260

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + ++R L P   I LS +    V+ +G +V +     +M I T   AL D S GD+I++ 
Sbjct: 261 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMISLV 317

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           NI +G  V G V   G+V V
Sbjct: 318 NIRSGKTVQGKVSAVGSVVV 337


>gi|327480014|gb|AEA83324.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           stutzeri DSM 4166]
          Length = 215

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S++V +   L+  VI    V +  +    VL+++ +   +   S +   Y   + + +G
Sbjct: 78  WSVFVPAQVRLYREVI----VANRSLLRDTVLSQADVSLAERDVSALNQGYLTRMDEALG 133

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R + PD VI  + L    V+ +G +V I    G++++   G A++D + G  I VK
Sbjct: 134 NKLTRPVQPDQVITPNQLEMAKVVRKGDQVVITAKTGSISVRMPGEAMADGAPGKQIPVK 193

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +G  +   V   G V V +
Sbjct: 194 NQRSGRTIKARVTGPGRVEVAM 215


>gi|330830309|ref|YP_004393261.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           veronii B565]
 gi|328805445|gb|AEB50644.1| Flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
           veronii B565]
          Length = 227

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +Y+    S+        V  +  I  G++L+ES+L       + IRG+Y      +VG
Sbjct: 93  WDVYLPVRVSIQKP----YVTVANPIAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVG 148

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + ++R L P   I LS +    V+ +G +V +     N  I T   AL D S G++I + 
Sbjct: 149 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLV 205

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +G  V G V   G V V 
Sbjct: 206 NIRSGKTVEGKVSAVGAVSVT 226


>gi|121602252|ref|YP_989399.1| flagellar basal body P-ring biosynthesis protein FlgA [Bartonella
           bacilliformis KC583]
 gi|120614429|gb|ABM45030.1| flagella basal body P-ring formation protein FlgA [Bartonella
           bacilliformis KC583]
          Length = 152

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIK 65
            +FFSL +L+  + +A  +   +VP   I  G+ +++  L E   +  S     Y   +K
Sbjct: 10  NVFFSLCLLT--AAYADRVSF-LVPERSIYVGQRVSDVGLSEKNFIIKSEAASLYVIDMK 66

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            V+  V  R L     I L+ L  P ++ RG  +++I    N+ I+  G+ L   S GDV
Sbjct: 67  QVLNKVATRPLRAGRPIALTALGDPVLVERGQTIKLIFQSDNLQITAIGVVLQSGSSGDV 126

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
           + V+N D+G +V G+V+  G+VRV
Sbjct: 127 VRVRNADSGRIVMGTVLQNGSVRV 150


>gi|258625238|ref|ZP_05720150.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
 gi|258582485|gb|EEW07322.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
          Length = 265

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ + +    VV    +   E + ES LK  + T +  + ++  + + V+GL T R + 
Sbjct: 133 VTIKSVLTLPVVVAKTTLRRDETIQESNLKIEKRTLTR-QEDFYTNTQQVIGLETTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              ++  ++L    ++ +G +V II ++   T +T GIAL     G  I V+N  +G ++
Sbjct: 192 SGQIVNPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V D   V  
Sbjct: 252 RAVVTDLNQVHT 263


>gi|260365768|ref|ZP_05778264.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus K5030]
 gi|260880690|ref|ZP_05893045.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897704|ref|ZP_05906200.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308086270|gb|EFO35965.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308092470|gb|EFO42165.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308115034|gb|EFO52574.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus K5030]
          Length = 265

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  + LK    T S    ++  + K  +GL T R L 
Sbjct: 133 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTRRLR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 192 AGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGRNQVHT 263


>gi|294140178|ref|YP_003556156.1| flagellar basal-body P-ring formation protein FlgA [Shewanella
           violacea DSS12]
 gi|293326647|dbj|BAJ01378.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella violacea DSS12]
          Length = 234

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV    +  G+++ +  +    V  + +RG   +++ 
Sbjct: 100 WQIFISVRVDILYPV--------VVARQTLGPGDLIAKGDIVIKYVEQTLLRGQQFNNLA 151

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +VVG   +R    +  I  + L     + +G  V I     N  I T G AL D ++GD 
Sbjct: 152 EVVGTRVKRRTPANQPIFSNNL---CFVCKGDSVSIFARTDNFEIKTVGEALQDGNLGDR 208

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I +KN  +   V   V+D G V V +
Sbjct: 209 IRIKNTYSHKTVDARVIDVGKVEVRM 234


>gi|306846277|ref|ZP_07478838.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO1]
 gi|306273272|gb|EFM55141.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO1]
          Length = 160

 Score =  124 bits (311), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 1/153 (0%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGN 59
           +   R  L     + +     A+     VVPS  +  G++++++ L E Q   N+     
Sbjct: 8   LQTTRLALAGGFLLAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y  S+   VG V R+ LLP   I +S L  P +++RG  V ++ T G +TI+  G  L  
Sbjct: 68  YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGVPVPLVFTAGTLTITAMGTPLES 127

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
            + GD I V+N+D+G++VSG+V+  G ++V ++
Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160


>gi|170741837|ref|YP_001770492.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
 gi|168196111|gb|ACA18058.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
          Length = 176

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+++ E+ L+E     +   R     +   +VG V RR LLP   +P++ + 
Sbjct: 52  VPAVTIYPGDMIKETMLREQSFPPTFRARAAVIDAPLAIVGRVARRTLLPGEPVPVNAVD 111

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++SRG    +I  +  + I+T G  L +  +G+VI V+N DTG +V G V   G +R
Sbjct: 112 DPRLVSRGTPTTMIFEENGLIITTLGTPLQNGGLGEVIRVRNTDTGRIVVGVVQGDGRIR 171

Query: 149 V 149
           +
Sbjct: 172 I 172


>gi|90577340|ref|ZP_01233151.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
 gi|90440426|gb|EAS65606.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
          Length = 247

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            +++  +    +V   +I+  E++    L    +       N     + V+GL   R + 
Sbjct: 115 ATVYVQLTLPVMVARTLIHRDELITRGMLDSQMLQL-KAPKNIITDAEQVIGLHAIRRIR 173

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  ++L +P++I++G +V I+  +G    ST GIAL    + + I V+N  T  ++
Sbjct: 174 QGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGIALEHGKMHEQIRVENTATQKVI 233

Query: 138 SGSVVDTGTVRVV 150
              V   G V  V
Sbjct: 234 HARVFAQGKVETV 246


>gi|330447899|ref|ZP_08311547.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492090|dbj|GAA06044.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 312

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            +++  +    +V    IN  E++    L    +   +       S    VG  T R + 
Sbjct: 180 ATIYVEITLPVLVAKTQINRNEMITSDMLSHQSIRLKS-PKAIVTSTDQTVGSYTSRRVR 238

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  ++L +P++I++G +V I+  +G    ST GIAL    + + I +KN ++  ++
Sbjct: 239 QGQLITENLLKKPFLINKGDEVLIVAKRGEFEASTKGIALEHGKLNEQIKIKNKNSHKVI 298

Query: 138 SGSVVDTGTVRVV 150
           SG +   G V  +
Sbjct: 299 SGIIFAQGKVETI 311


>gi|254500840|ref|ZP_05112991.1| flagella basal body P-ring formation protein FlgA [Labrenzia
           alexandrii DFL-11]
 gi|222436911|gb|EEE43590.1| flagella basal body P-ring formation protein FlgA [Labrenzia
           alexandrii DFL-11]
          Length = 152

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYA 61
            ++ + F    + +  S FA+ I    V    I AG  +    L E +  +        A
Sbjct: 4   ALKLVAFCLAMLTAAPSAFAASIELP-VARQTIPAGSEIGHRDLVERKFPSRTATQFAVA 62

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
                +VG VTRR LLP   IP++ + +P ++ RG   R++  +  + I     AL +  
Sbjct: 63  SHRSQLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGG 122

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            G  + V+N+D+G++VSG V   GT+RV
Sbjct: 123 AGSFVRVRNVDSGLVVSGRVQQDGTIRV 150


>gi|170722898|ref|YP_001750586.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida W619]
 gi|169760901|gb|ACA74217.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida W619]
          Length = 250

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +    ++ E  +   +     +   +   +   VG
Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRQNIVAEGDVALRERDVGTLTQGFLTDLDQAVG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  VI +G  V II   G++ +   G ALS    G+ I V+
Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVIRKGDHVVIIARSGSLAVRMPGEALSKGGQGEQIRVR 228

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 229 NLNSQRVVKARVTAPGQVEVAM 250


>gi|23008124|ref|ZP_00049700.1| COG1261: Flagellar basal body P-ring biosynthesis protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 158

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 5   RFLLFFSLYVLSLDSLFASVIG-------HAVVPSVVINAGEVLNESRLKEMQVTNS-NI 56
           R  LF  L +  L +  A  +           VP+V I  G+ + E+ L+      +   
Sbjct: 3   RTPLFRGLLIACLAAGPAHAVEGMAGGELMLPVPTVTIYPGDTIKETMLRMQAYPATYRA 62

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
           R     +   + G   RR+LLP   +P++ +  P ++SRG   ++I  +  + I+  G  
Sbjct: 63  RTAVIDASAAIAGRTARRMLLPGEPVPVNAVDDPRLVSRGTPTQMIFEENGLVITAIGAP 122

Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           L +  +G+ I V+N DT  +V G+V+  G +R+
Sbjct: 123 LQNGGLGETIRVRNTDTNRIVLGTVMADGRIRI 155


>gi|260466618|ref|ZP_05812806.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           opportunistum WSM2075]
 gi|259029624|gb|EEW30912.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           opportunistum WSM2075]
          Length = 182

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHV 81
           +V    ++P+ VI  GE +  + LK++ +          A   +++ G V +R LLP   
Sbjct: 52  AVGEVVLIPNRVIYPGETIELTALKQVTLIPGKHKPEAMATVAEELQGKVAKRTLLPGRY 111

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           IP + +   +++ +GA V++    G +TIS   + L   S GD+I V+N D+G ++SG+V
Sbjct: 112 IPSTAIRDAWLVEQGAAVQVFFISGGLTISATAVTLQPGSAGDLIKVRNSDSGKILSGTV 171

Query: 142 VDTGTVRVVV 151
           +  GT++V  
Sbjct: 172 MADGTIQVSA 181


>gi|217976226|ref|YP_002360373.1| flagella basal body P-ring formation protein FlgA [Methylocella
           silvestris BL2]
 gi|217501602|gb|ACK49011.1| flagella basal body P-ring formation protein FlgA [Methylocella
           silvestris BL2]
          Length = 148

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDV 67
           F ++ +       A+      VP++ I  G+ + +  L +     ++ +RGN   +   +
Sbjct: 4   FVAICLFGRIPAHAAESHALPVPAITIYPGDPIKDEWLVDRDFGATSPLRGNVVTNRSAI 63

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G + RR LLP   IP +V+    ++  G KVRI+  Q  + I+T G AL D ++GDVI+
Sbjct: 64  IGKIARRTLLPGAPIPANVVAERKIVGNGTKVRIVFEQPGIEIATYGAALQDGALGDVIS 123

Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
           ++NI+TG+ V+G V   G+VRV
Sbjct: 124 LRNIETGLTVTGVVQADGSVRV 145


>gi|153011523|ref|YP_001372737.1| flagellar basal body P-ring biosynthesis protein FlgA [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563411|gb|ABS16908.1| FlgA, flagellar basal-body P-ring formation protein [Ochrobactrum
           anthropi ATCC 49188]
          Length = 160

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S     G V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSPDQAAGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   ++GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAVGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|167623355|ref|YP_001673649.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           halifaxensis HAW-EB4]
 gi|167353377|gb|ABZ75990.1| SAF domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 257

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
             S+   ++   VV    +  G++L+   ++   +  + +RG+    I +VVG   +R +
Sbjct: 126 FVSVRVDILYPVVVAKSTMGPGDLLSRGDIELEYIEQTTLRGHQFEEISEVVGARLKRRV 185

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            P   I  + L    ++ +G  V I     N  I T G AL DA++GD + +KN  +   
Sbjct: 186 APGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDANVGDKVRIKNSHSHKN 242

Query: 137 VSGSVVDTGTVRVVV 151
           +   V   G V V +
Sbjct: 243 LDARVTGVGQVEVRM 257


>gi|239834441|ref|ZP_04682769.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
           intermedium LMG 3301]
 gi|239822504|gb|EEQ94073.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
           intermedium LMG 3301]
          Length = 163

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+    G V R+ LLP   I +S L
Sbjct: 39  VVPSATVYPGQIVSDTALLEKQFFINAPAASQYVLSLDQAAGKVARKTLLPGKPILVSAL 98

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 99  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLADGRI 158

Query: 148 RVVVK 152
           +V ++
Sbjct: 159 QVGMQ 163


>gi|331671800|ref|ZP_08372596.1| SAF domain protein [Escherichia coli TA280]
 gi|331070789|gb|EGI42148.1| SAF domain protein [Escherichia coli TA280]
          Length = 252

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 61/151 (40%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   V+     L  + ++      S  R N 
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSVVARDTPLTANDVELKPYNVSAQRRNV 159

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 160 LMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 219

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250


>gi|326794324|ref|YP_004312144.1| flagella basal body P-ring formation protein FlgA [Marinomonas
           mediterranea MMB-1]
 gi|326545088|gb|ADZ90308.1| flagella basal body P-ring formation protein FlgA [Marinomonas
           mediterranea MMB-1]
          Length = 231

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 63/134 (47%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           S   +  S++   +  SV I+ G V+  +     +V  + IRG+   +     GLV  R 
Sbjct: 96  SFVPVSQSILIDGIKTSVPISRGSVITPTNTTTGKVDITTIRGHLYTAKTPPYGLVASRN 155

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +  +  I   +  +P ++ +GA+V I    G +++   G AL D + G  I VKN  +G 
Sbjct: 156 IRINTFITDKITKQPILVKKGARVLITARSGRISVKMNGTALEDGAKGQQIRVKNASSGR 215

Query: 136 MVSGSVVDTGTVRV 149
           +V G VV    V V
Sbjct: 216 IVYGKVVSDSEVLV 229


>gi|311992321|gb|ADQ26734.1| chaperone for P-ring biosynthesis protein [Aeromonas hydrophila]
          Length = 284

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LY+    S+        V  S  +  G++L+E  L +     + IRG+Y      ++G
Sbjct: 150 WDLYLPVRVSIQKP----YVTVSTPVAKGDILSEGVLTQAYQDQTLIRGDYLSDTTALIG 205

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + ++R L P   I LS +    V+ +G +V +     +M I T   AL D S GD+I + 
Sbjct: 206 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 262

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +G  V G V   G+V V 
Sbjct: 263 NIRSGKTVQGKVNAVGSVVVT 283


>gi|118589980|ref|ZP_01547384.1| flagellar basal body P-ring biosynthesis protein A [Stappia
           aggregata IAM 12614]
 gi|118437477|gb|EAV44114.1| flagellar basal body P-ring biosynthesis protein A [Stappia
           aggregata IAM 12614]
          Length = 151

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-H 62
           +R L    + V S  +  A+      VP   I AG  ++   L E        +      
Sbjct: 3   IRSLFLALVLVFSTAAARAAGGIDLPVPRQTIQAGTEISHQDLIERSFPTRTAQQFAVST 62

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +   +VG+V RR LLP   +P+S + +P ++ RG   R++  +  + I     AL +   
Sbjct: 63  NRGQLVGMVARRTLLPGQPVPISSVEKPVLVRRGEPARLVFREQGLMIIMQVEALQNGGA 122

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G+ + V+N+D+G++VSG V + GT+RV
Sbjct: 123 GNFVRVRNVDSGLVVSGRVQEDGTIRV 149


>gi|117619788|ref|YP_857349.1| flagella basal body P-ring formation protein FlgA [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561195|gb|ABK38143.1| flagella basal body P-ring formation protein FlgA [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 285

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LY+    S+        V  S  +  G++L+E  L +     + +RG+Y      ++G
Sbjct: 151 WDLYLPVRVSIQKP----YVTVSTPVAKGDILSEGVLTQAYQDQTLMRGDYLSDTTALIG 206

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + ++R L P   I LS +    V+ +G +V +     +M I T   AL D S GD+I + 
Sbjct: 207 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 263

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           NI +G  V G V   G+V V 
Sbjct: 264 NIRSGKTVQGKVNAVGSVVVT 284


>gi|254720609|ref|ZP_05182420.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|265985649|ref|ZP_06098384.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|306838571|ref|ZP_07471408.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
           2653]
 gi|264664241|gb|EEZ34502.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
           83/13]
 gi|306406357|gb|EFM62599.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
           2653]
          Length = 160

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 1/153 (0%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGN 59
           +   R  L   L   +     A+     VVPS  +  G++++++ L E Q   N+     
Sbjct: 8   LQTTRLALAGGLLFAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
           Y  S+   VG V R+ LLP   I +S L  P +I+RG    ++ T G +TI+  G  L  
Sbjct: 68  YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLITRGVPAPLVFTAGTLTITAMGTPLES 127

Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
            + GD I V+N+D+G++VSG+V+  G ++V ++
Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160


>gi|148546700|ref|YP_001266802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida F1]
 gi|148510758|gb|ABQ77618.1| SAF domain protein [Pseudomonas putida F1]
          Length = 250

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +     + E  +   +     +   +   +   VG
Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  V+ +G +V II   G++++   G ALS   + + I V+
Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 228

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 229 NLNSKRVVKARVTGPGQVEVSM 250


>gi|319781680|ref|YP_004141156.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167568|gb|ADV11106.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 175

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++PS VI  GE +N + LK++ +          A   +++ G V +R LLP   IP + 
Sbjct: 50  VLIPSRVIYPGETINLAALKQVTLVVGKHKPEAVATRAEELDGKVAKRTLLPGRYIPSAA 109

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +   +++ +GA V+I    G +TIS   + L   + GD++ V+NID+G ++SG+V+  GT
Sbjct: 110 IREAWLVEQGASVQIFFIAGGLTISATAVTLQPGAAGDLVKVRNIDSGKILSGTVMADGT 169

Query: 147 VRVVV 151
           ++V  
Sbjct: 170 IQVSA 174


>gi|328543155|ref|YP_004303264.1| flagellar protein FlgA [polymorphum gilvum SL003B-26A1]
 gi|326412901|gb|ADZ69964.1| flagellar protein FlgA [Polymorphum gilvum SL003B-26A1]
          Length = 322

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 57/117 (48%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             I  G +L    L  +++    +      S  ++VGL  R  L P   +  +   RP +
Sbjct: 191 QPIGRGSILKPEDLTVIRLPRQRVPSRAVTSPDEIVGLAARTTLRPGQPLSRTDFERPLI 250

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++RG KV ++     M ++  G A+S  + GD I V N+ +  +++G+VV  G +RV
Sbjct: 251 VARGEKVTLLYEMSGMKLTARGQAMSAGAEGDEIDVMNLQSRRIITGTVVARGQIRV 307


>gi|170682474|ref|YP_001742369.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
           SMS-3-5]
 gi|170520192|gb|ACB18370.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
           SMS-3-5]
          Length = 245

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 64/151 (42%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N+ +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNVSSQRVISARVAESGVVTTVS 243


>gi|28900118|ref|NP_799773.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|28808401|dbj|BAC61606.1| LfgA [Vibrio parahaemolyticus RIMD 2210633]
          Length = 235

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  + LK    T S    ++  + K  +GL T R L 
Sbjct: 103 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTRRLR 161

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 162 AGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 221

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 222 RAVVTGRNQVHT 233


>gi|146307875|ref|YP_001188340.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina ymp]
 gi|145576076|gb|ABP85608.1| SAF domain protein [Pseudomonas mendocina ymp]
          Length = 252

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+  V     V +  +    V+  S L  ++     +   Y       +G
Sbjct: 115 WTVFVPAEVRLYRQV----AVLTRPLKRLSVVKASDLSMVERDVGQLAQGYLTDPTQAIG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L  D +I  + L    VI RG +V I  + G + +   G AL+D + G  I V+
Sbjct: 171 KKLTRQLNSDQIITPAHLQVAEVIRRGDQVVISASGGTVNVRMPGEALTDGAPGQQINVR 230

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   VV  G V V +
Sbjct: 231 NLRSQRVIRARVVGPGQVEVAM 252


>gi|319409186|emb|CBI82830.1| Flagella basal body P-ring formation protein FlgA [Bartonella
           schoenbuchensis R1]
          Length = 152

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRR 74
           SL  ++A  +   +VP+  + AG+ +++  L E      S     YA  +  ++  V +R
Sbjct: 17  SLTVVYADRVNF-IVPNKSVYAGQRVSDVGLSEKSFFIKSEAASLYATQMNQLLNKVAKR 75

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L     I L+ L  P ++ RG   ++I    N+ I+  G+ L   S GD+I V+N D+G
Sbjct: 76  TLTAGRPISLASLGDPVLVERGQTTKLIFQMNNLQITALGVVLQSGSSGDLIRVRNADSG 135

Query: 135 VMVSGSVVDTGTVRV 149
            +V G+V+  G VRV
Sbjct: 136 RIVMGTVLQNGDVRV 150


>gi|313497755|gb|ADR59121.1| FlgA [Pseudomonas putida BIRD-1]
          Length = 240

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +     + E  +   +     +   +   +   VG
Sbjct: 103 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 158

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  V+ +G +V II   G++++   G ALS   + + I V+
Sbjct: 159 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 218

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 219 NLNSKRVVKARVTGPGQVEVSM 240


>gi|156976137|ref|YP_001447043.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           harveyi ATCC BAA-1116]
 gi|156527731|gb|ABU72816.1| hypothetical protein VIBHAR_04908 [Vibrio harveyi ATCC BAA-1116]
          Length = 265

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ ++V    +V +  I   E ++ S LK    T S  + ++       +GL T R + 
Sbjct: 133 VTIKSAVTLPVLVATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  + L  P +I +G +V II ++   + ST G+AL     G  I V+NI +G ++
Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENISSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGLNQVHT 263


>gi|152985501|ref|YP_001347163.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PA7]
 gi|150960659|gb|ABR82684.1| hypothetical protein PSPA7_1780 [Pseudomonas aeruginosa PA7]
          Length = 232

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL+++ +  ++     +   Y      VVG
Sbjct: 95  WTIFMPAQVKLFRQV----VVAVQPLKREHVLDDADIALVERDVGLLTQGYLTDPARVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+  + L +   + +G +V I+     + +   G AL+D + G  I V+
Sbjct: 151 QKLRRPVINDQVLAPAFLEQAEAVRKGDQVVILARTATINVKMPGEALADGAPGQQIRVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 211 NLRSQRVIKARVLEPGTVEVNM 232


>gi|167034950|ref|YP_001670181.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida GB-1]
 gi|166861438|gb|ABY99845.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida GB-1]
          Length = 250

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +     + E  +   +     +   +   +   VG
Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  V+ +G +V II   G++++   G ALS   + + I V+
Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 228

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 229 NLNSKRVVKARVTGPGQVEVSM 250


>gi|15598546|ref|NP_252040.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PAO1]
 gi|218890454|ref|YP_002439318.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa LESB58]
 gi|254236312|ref|ZP_04929635.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
 gi|254242037|ref|ZP_04935359.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
 gi|9949483|gb|AAG06738.1|AE004757_7 hypothetical protein PA3350 [Pseudomonas aeruginosa PAO1]
 gi|126168243|gb|EAZ53754.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
 gi|126195415|gb|EAZ59478.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
 gi|218770677|emb|CAW26442.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa LESB58]
          Length = 232

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL ++ +  ++     +   Y      VVG
Sbjct: 95  WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232


>gi|49082058|gb|AAT50429.1| PA3350 [synthetic construct]
          Length = 233

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL ++ +  ++     +   Y      VVG
Sbjct: 95  WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232


>gi|312115248|ref|YP_004012844.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220377|gb|ADP71745.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 155

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSN 55
           M  +   +  +  V +   L    +         VP   +  G+V+ E  L   Q++ + 
Sbjct: 1   MGSIMKSVMITAAVAAPFFLATPSLAEEGGRIVPVPKRALYPGDVITEEMLTSKQLSENE 60

Query: 56  IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
               +      VVG  +RR LLP   IP   +  P V+ +G  V ++     + I+   +
Sbjct: 61  NASAFITEASGVVGKTSRRTLLPGLPIPKVAIREPVVVRQGKAVSLVYESDTVRITGLAM 120

Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           AL   S+G+ I+ +N D+GV++ G V+  G+VRV
Sbjct: 121 ALQSGSVGETISARNPDSGVVIHGVVMADGSVRV 154


>gi|107102882|ref|ZP_01366800.1| hypothetical protein PaerPA_01003950 [Pseudomonas aeruginosa PACS2]
          Length = 232

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL ++ +  ++     +   Y      VVG
Sbjct: 95  WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232


>gi|28869130|ref|NP_791749.1| flagellar protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967591|ref|ZP_03395739.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
 gi|301385704|ref|ZP_07234122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato Max13]
 gi|302062727|ref|ZP_07254268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato K40]
 gi|302134843|ref|ZP_07260833.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852370|gb|AAO55444.1| flagellar protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927892|gb|EEB61439.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
 gi|331019680|gb|EGH99736.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 248

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 111 WTVFVPAQVQLFRNV----VTVMRPLKRDAIVTEEDIAMRERDVSSLGQGFLASLDQAVG 166

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 167 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 227 NLNSQRVIKANVTGPGQVEVAM 248


>gi|306841048|ref|ZP_07473772.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO2]
 gi|306288937|gb|EFM60237.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
           BO2]
          Length = 160

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L   + GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|269960112|ref|ZP_06174488.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
 gi|269835083|gb|EEZ89166.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
          Length = 265

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ ++V    +V +  I+  + L+ S LK    T S  + ++       +GL T R + 
Sbjct: 133 VTIKSAVTLPVLVATSTIDRNDTLSASNLKSETRTISR-QDDFYTKANQAIGLETTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  + L  P +I +G +V II ++G  + ST G+AL     G  I V+N  +G ++
Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKGGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGLNQVHT 263


>gi|88799014|ref|ZP_01114595.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
           MED297]
 gi|88778241|gb|EAR09435.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
           MED297]
          Length = 268

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
             +  Y+     +F  V    V+ +  ++    +   +L+  +    ++R  Y      +
Sbjct: 126 PAWQAYLPIAVQIFKPV----VIAARPLDRNNNVAVGQLRLQRRDIGDLRQGYFLEAAKI 181

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
            G   RR +    VI   ++  P +I+RG  V +I  +G +T++T G AL D ++G+ I 
Sbjct: 182 EGYALRRTVKAGQVITPYMVEAPSLIARGDWVTVISGRGALTVTTTGEALKDGALGEQIP 241

Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
           V+N+ +   V   V+  G V  
Sbjct: 242 VRNLSSDETVRAWVIRKGVVST 263


>gi|94267695|ref|ZP_01290964.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
 gi|93451897|gb|EAT02628.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
          Length = 242

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 66/138 (47%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
                +     +G  VV +  IN GE++    L   +   SN+ GN+    ++ VG   R
Sbjct: 105 AEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDGNFVSDPREAVGKQLR 164

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
             + P  V+  S L +P ++ RG +VRII  QG + +S  G      + G+++ V+N+ +
Sbjct: 165 TTIQPGAVLHQSRLEKPPLVRRGDRVRIIAHQGRVRVSAPGEVRDLGAEGELVRVRNLMS 224

Query: 134 GVMVSGSVVDTGTVRVVV 151
              +   V+D  TV  ++
Sbjct: 225 RQEIQARVIDGSTVETIL 242


>gi|218703521|ref|YP_002411040.1| lateral flagellar P-ring addition FlgA-like protein [Escherichia
           coli UMN026]
 gi|293403351|ref|ZP_06647442.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378963|ref|ZP_06988844.1| conserved hypothetical protein [Escherichia coli FVEC1302]
 gi|300900365|ref|ZP_07118540.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
 gi|218430618|emb|CAR11484.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli UMN026]
 gi|291429204|gb|EFF02224.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280076|gb|EFI21580.1| conserved hypothetical protein [Escherichia coli FVEC1302]
 gi|300356121|gb|EFJ71991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
          Length = 245

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 61/151 (40%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R N 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|116051365|ref|YP_789802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|296388142|ref|ZP_06877617.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           aeruginosa PAb1]
 gi|313108700|ref|ZP_07794696.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa 39016]
 gi|115586586|gb|ABJ12601.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310881198|gb|EFQ39792.1| putative flagella basal body P-ring formation protein [Pseudomonas
           aeruginosa 39016]
          Length = 232

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL ++ +  ++     +   Y      VVG
Sbjct: 95  WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 211 NLRSQRVIKARVIEPGTVEVNM 232


>gi|269965640|ref|ZP_06179753.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
 gi|269829708|gb|EEZ83944.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
          Length = 265

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +S+    +V +  +   EV+    +K    T S  + ++    +  VGL T R L 
Sbjct: 133 VTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSRRLR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  S L  P +I +G +V +I ++   + ST G+AL D + G  I V+N  +G ++
Sbjct: 192 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGLNQVHT 263


>gi|218528667|ref|YP_002419483.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
 gi|218520970|gb|ACK81555.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
          Length = 164

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+ + ES L+      +   R     +   + G V RR+LLP   +P++ + 
Sbjct: 41  VPTVTIYPGDTIKESMLRMQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAVD 100

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  ++ G+V+  G +R
Sbjct: 101 DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRIR 160

Query: 149 V 149
           +
Sbjct: 161 I 161


>gi|23499917|ref|NP_699357.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis 1330]
 gi|62317104|ref|YP_222957.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269096|ref|YP_418387.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis biovar Abortus 2308]
 gi|161620237|ref|YP_001594123.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           canis ATCC 23365]
 gi|189022369|ref|YP_001932110.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus S19]
 gi|225686013|ref|YP_002733985.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis ATCC 23457]
 gi|254691411|ref|ZP_05154665.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|254695291|ref|ZP_05157119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698166|ref|ZP_05159994.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254702577|ref|ZP_05164405.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|254706291|ref|ZP_05168119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|254711415|ref|ZP_05173226.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|254712014|ref|ZP_05173825.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|254715083|ref|ZP_05176894.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|254731834|ref|ZP_05190412.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|256029955|ref|ZP_05443569.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|256059607|ref|ZP_05449805.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|256111942|ref|ZP_05452893.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|256256597|ref|ZP_05462133.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|256262864|ref|ZP_05465396.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
 gi|260544342|ref|ZP_05820163.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
 gi|260568515|ref|ZP_05838984.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
 gi|260757025|ref|ZP_05869373.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|260759603|ref|ZP_05871951.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|260762611|ref|ZP_05874945.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260882835|ref|ZP_05894449.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|261215660|ref|ZP_05929941.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|261216793|ref|ZP_05931074.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|261313735|ref|ZP_05952932.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|261319023|ref|ZP_05958220.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|261319660|ref|ZP_05958857.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|261323576|ref|ZP_05962773.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|261753157|ref|ZP_05996866.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|265986974|ref|ZP_06099531.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|265993389|ref|ZP_06105946.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|297249953|ref|ZP_06933654.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           bv. 5 str. B3196]
 gi|23463494|gb|AAN33362.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Brucella suis 1330]
 gi|62197297|gb|AAX75596.1| FlgA, flagellar basal-body P-ring formation protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939370|emb|CAJ12318.1| Flageller protein FlgA [Brucella melitensis biovar Abortus 2308]
 gi|161337048|gb|ABX63352.1| FlgA, flagellar basal-body P-ring formation protein [Brucella canis
           ATCC 23365]
 gi|189020943|gb|ACD73664.1| Flageller protein FlgA [Brucella abortus S19]
 gi|225642118|gb|ACO02031.1| flagella basal body P-ring formation protein FlgA [Brucella
           melitensis ATCC 23457]
 gi|260097613|gb|EEW81487.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
 gi|260155180|gb|EEW90261.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
 gi|260669921|gb|EEX56861.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 4 str. 292]
 gi|260673034|gb|EEX59855.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260677133|gb|EEX63954.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 6 str. 870]
 gi|260872363|gb|EEX79432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 9 str. C68]
 gi|260917267|gb|EEX84128.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           abortus bv. 3 str. Tulya]
 gi|260921882|gb|EEX88450.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M13/05/1]
 gi|261292350|gb|EEX95846.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M644/93/1]
 gi|261298246|gb|EEY01743.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis B2/94]
 gi|261299556|gb|EEY03053.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           neotomae 5K33]
 gi|261302761|gb|EEY06258.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M163/99/10]
 gi|261742910|gb|EEY30836.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis bv. 3 str. 686]
 gi|262764259|gb|EEZ10291.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 3 str. Ether]
 gi|263092699|gb|EEZ16908.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
 gi|264659171|gb|EEZ29432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           pinnipedialis M292/94/1]
 gi|297173822|gb|EFH33186.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           bv. 5 str. B3196]
          Length = 160

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|70731829|ref|YP_261571.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           fluorescens Pf-5]
 gi|68346128|gb|AAY93734.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 253

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V+  A      +    ++    +   +   S     Y  S+   +G
Sbjct: 116 WTVFVPAQVKLFREVVTTA----RPLKRAGIIEPEDVVLRERDISQNNQGYLTSVDQAIG 171

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D ++ L+ L +  V+ +G +V I    G + +   G ALS+  + + I VK
Sbjct: 172 QKLVRPMVADQLVTLAHLEQAEVVRKGDQVVISARSGTLNVRMPGEALSNGGMSEQIRVK 231

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++   +   G V V +
Sbjct: 232 NLNSQRVIKARITAPGQVEVAM 253


>gi|256014943|ref|YP_003104952.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
           CCM 4915]
 gi|255997603|gb|ACU49290.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
           CCM 4915]
          Length = 160

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|163850064|ref|YP_001638107.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium extorquens PA1]
 gi|240137198|ref|YP_002961667.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens AM1]
 gi|254559210|ref|YP_003066305.1| flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens DM4]
 gi|163661669|gb|ABY29036.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium extorquens PA1]
 gi|240007164|gb|ACS38390.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens AM1]
 gi|254266488|emb|CAX22252.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
           extorquens DM4]
          Length = 164

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+ + ES L+      +   R     +   + G V RR+LLP   +P++ + 
Sbjct: 41  VPTVTIYPGDTIKESMLRMQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAVD 100

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  ++ G+V+  G +R
Sbjct: 101 DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRIR 160

Query: 149 V 149
           +
Sbjct: 161 I 161


>gi|254227979|ref|ZP_04921409.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|262396039|ref|YP_003287892.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
 gi|151939475|gb|EDN58303.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|262339633|gb|ACY53427.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
          Length = 265

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +S+    +V +  +   EV+    +K    T S  + ++       +GL T R L 
Sbjct: 133 VTIKSSLTLPVLVATTTVGRNEVVTAKHVKLETRTISR-QDDFYTRPGQAIGLETSRRLR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  S L  P +I +G +V +I ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 192 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIEVENLSSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGLNQVHT 263


>gi|163803165|ref|ZP_02197048.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
 gi|159173065|gb|EDP57898.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
          Length = 228

 Score =  120 bits (301), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ ++V    +V +  I   EV++ S LK    T S  + ++   +  V+GL T R + 
Sbjct: 96  VTIKSAVTLPVLVATSTIGRNEVISASNLKTETRTISR-QNDFFTQMNQVIGLETTRRIR 154

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
               I  + L  P +I +G +V II ++   + ST G+AL     G  I V+N  +G ++
Sbjct: 155 AGQTIAPTNLSSPPLIEKGNEVLIIASKEGFSASTKGVALEQGKKGQQIEVENTRSGKVI 214

Query: 138 SGSVVDTGTV 147
              V     V
Sbjct: 215 RAIVTGVNQV 224


>gi|283784081|ref|YP_003363946.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
           ICC168]
 gi|282947535|emb|CBG87087.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
           ICC168]
          Length = 256

 Score =  120 bits (301), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 59/130 (45%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++   V    V+P  +I    V+    +   +   S  R      + + +G+ ++R L 
Sbjct: 120 VAVRPDVYVPVVMPKSLIARDTVITADDVLLKRYNVSGQRSGLLMDLNEAIGMTSKRPLQ 179

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
           P   +  + L  P ++ R   V I+   G +T +  G+AL +   G+VI ++N  +  ++
Sbjct: 180 PGKPLNRAQLVAPVLVKRDQPVMIVSRLGGITAAMPGVALKNGRKGEVIKIRNAASQRII 239

Query: 138 SGSVVDTGTV 147
           SG V D G V
Sbjct: 240 SGVVDDAGVV 249


>gi|325274808|ref|ZP_08140835.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           sp. TJI-51]
 gi|324100053|gb|EGB97872.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           sp. TJI-51]
          Length = 240

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +    V+ E  +   +     +   +   +   VG
Sbjct: 103 WTVFVPATVRLFRDV----VVVTRPLKRDNVVGEGDVALRERDVGTLGQGFLSELDQAVG 158

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  V+ +G +V I+   G++++   G ALS   + + I V+
Sbjct: 159 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIVARSGSLSVRMPGEALSKGGLSEQIRVR 218

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 219 NLNSKRVVKARVTGPGQVEVSM 240


>gi|289679038|ref|ZP_06499928.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae FF5]
 gi|302185595|ref|ZP_07262268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae 642]
 gi|330899392|gb|EGH30811.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330943194|gb|EGH45603.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. pisi str. 1704B]
 gi|330953710|gb|EGH53970.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae Cit 7]
          Length = 222

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P ++ +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVITPVALEQPQMVHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  SV   G V V +
Sbjct: 201 NLNSQRVIKASVTGPGQVEVAM 222


>gi|148558735|ref|YP_001257214.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ovis ATCC 25840]
 gi|148370020|gb|ABQ62892.1| putative flagellar basal-body P-ring formation protein FlgA
           [Brucella ovis ATCC 25840]
          Length = 160

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ L P   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLFPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|328470097|gb|EGF41008.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 10329]
          Length = 181

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  + LK    T S    ++    K  +GL T R L 
Sbjct: 49  VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 107

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 108 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 167

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 168 RAVVTGRNQVHT 179


>gi|308126103|ref|ZP_05907780.2| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|308109249|gb|EFO46789.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ4037]
          Length = 181

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  + LK    T S    ++    K  +GL T R L 
Sbjct: 49  VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 107

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 108 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 167

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 168 RAVVTGRNQVHT 179


>gi|153831669|ref|ZP_01984336.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
 gi|148872179|gb|EDL70996.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
          Length = 265

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ ++V    ++ +  I   E ++ S LK    T S  + ++       +GL T R + 
Sbjct: 133 VTIKSAVTLPVLIATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  + L  P +I +G +V II ++   + ST G+AL     G  I V+N  +G ++
Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 252 RAVVTGLNQVHT 263


>gi|89072320|ref|ZP_01158899.1| LfgA [Photobacterium sp. SKA34]
 gi|89051852|gb|EAR57304.1| LfgA [Photobacterium sp. SKA34]
          Length = 270

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 1/133 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            +++  +    +V   +I+  E++    L   ++       +   ++  V+GL T R + 
Sbjct: 138 ATVYVQLTLPVMVARTLIHRDEIITRDMLDSKKLQL-KAPKSIITNVDQVIGLHTNRRIR 196

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  ++L +P++I++G +V I+  +G    ST G+AL    + + I V+N     ++
Sbjct: 197 QGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGVALDHGKMKEQIKVENTANQKVI 256

Query: 138 SGSVVDTGTVRVV 150
              V   G V  +
Sbjct: 257 HARVFAQGKVETI 269


>gi|307823527|ref|ZP_07653756.1| flagella basal body P-ring formation protein FlgA [Methylobacter
           tundripaludum SV96]
 gi|307735512|gb|EFO06360.1| flagella basal body P-ring formation protein FlgA [Methylobacter
           tundripaludum SV96]
          Length = 232

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S++   +   +  V    VV S  I  GE++    L   +   S +R ++   ++ V  
Sbjct: 95  WSIFTSVIIKTYQMV----VVLSQPIRRGEIITRQHLAIEKREVSKLREDFVIQMEQVEN 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L    ++ L  +  P +I RG KV I  T+ + +I   G+A+ D + G +I+VK
Sbjct: 151 KQVTRQLDAGTILSLRNIAEPKLIKRGDKVVISTTKSDFSIKMNGVAMMDGTKGQLISVK 210

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N ++G +++ +V++ G V V
Sbjct: 211 NQNSGRIINATVIEPGLVSV 230


>gi|330875965|gb|EGH10114.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 248

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF +V    V     +    +++E  +   +   S++   +  S+   VG
Sbjct: 111 WTVFVPAQVRLFRNV----VTVMRPLKRDAIVSEEDVALRERDVSSLGQGFLASLDQAVG 166

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 167 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 227 NLNSQRVIKANVTGPGQVEVAM 248


>gi|225628626|ref|ZP_03786660.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
           str. Cudo]
 gi|237816666|ref|ZP_04595658.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           str. 2308 A]
 gi|225616472|gb|EEH13520.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
           str. Cudo]
 gi|237787479|gb|EEP61695.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
           str. 2308 A]
 gi|326410336|gb|ADZ67400.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis M28]
 gi|326553628|gb|ADZ88267.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis M5-90]
          Length = 165

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 41  VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 100

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 101 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 160

Query: 148 RVVVK 152
           +V ++
Sbjct: 161 QVGMQ 165


>gi|66046716|ref|YP_236557.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257423|gb|AAY38519.1| Flageller protein FlgA [Pseudomonas syringae pv. syringae B728a]
          Length = 252

 Score =  119 bits (300), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 115 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 171 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  SV   G V V +
Sbjct: 231 NLNSQRVIKASVTGPGQVEVAM 252


>gi|87119683|ref|ZP_01075580.1| flagellar protein, putative [Marinomonas sp. MED121]
 gi|86165159|gb|EAQ66427.1| flagellar protein, putative [Marinomonas sp. MED121]
          Length = 242

 Score =  119 bits (300), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           S   +   ++  AV     I   + +NES     +V  + +RG      +   GL+ +R 
Sbjct: 107 SFLPVSQKILVSAVKAITPIRRKQTINESNTVIAKVDLTQVRGQIYSPNQAPYGLIAKRN 166

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +  +  I   +   P ++ RG  + I    G + +   GIA  D ++G  I VKNI +G 
Sbjct: 167 ININTFITKQLTELPIIVKRGQNILISAQSGQINVRMNGIAAEDGTLGQQIKVKNISSGR 226

Query: 136 MVSGSVVDTGTVRV 149
            V G VV  G +RV
Sbjct: 227 FVYGKVVSEGEIRV 240


>gi|110632655|ref|YP_672863.1| flagellar protein FlgA [Mesorhizobium sp. BNC1]
 gi|110283639|gb|ABG61698.1| flagellar protein FlgA [Chelativorans sp. BNC1]
          Length = 157

 Score =  119 bits (300), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDH 80
           A      VVP+ VI  GE ++   L+EM +        + A +  D+ G V RR LLP  
Sbjct: 26  AHAQEVVVVPTRVIYPGETVSAEALQEMMLRQPPRGAASIARTPGDLEGKVARRTLLPGR 85

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           +IPLS +  PY++ +G+ V  + T G +TIS   + L   + GD I V+N+D+G + +G 
Sbjct: 86  LIPLSYVREPYLVEQGSTVTAVFTDGPLTISVLAVPLQPGAAGDFIKVRNVDSGAVFTGI 145

Query: 141 VVDTGTVRV 149
           V+  GTV+V
Sbjct: 146 VMQDGTVKV 154


>gi|88811797|ref|ZP_01127051.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
 gi|88791188|gb|EAR22301.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
          Length = 244

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV    +    V    ++ +  +  G  L+   ++  +   +++ G +      ++G
Sbjct: 107 WRLYVPVRITQHVEV----LIAARPLPRGIALSADAIRHGRRDPTDLSGAWYTEPSQLLG 162

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L TRR +    V+   +L    +I RG ++ +  T G+MT++  G AL D   GD++ V+
Sbjct: 163 LETRRAIRAGEVLSPQLLSSARLIRRGQELVLFATSGSMTVTVKGKALEDGVEGDIVRVR 222

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  +V G VV T  V+V +
Sbjct: 223 NLSSNRVVEGRVVGTDKVQVSL 244


>gi|330972404|gb|EGH72470.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 222

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  SV   G V V +
Sbjct: 201 NLNSQRVIKASVTGPGQVEVAM 222


>gi|91224203|ref|ZP_01259466.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
 gi|91191114|gb|EAS77380.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
          Length = 236

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +S+    +V +  +   EV+    +K    T S  + ++    +  VGL T R L 
Sbjct: 104 VTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSRRLR 162

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  S L  P +I +G +V +I ++   + ST G+AL D + G  I V+N  +G ++
Sbjct: 163 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSGKVI 222

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 223 RAVVTGLNQVHT 234


>gi|26991083|ref|NP_746508.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           putida KT2440]
 gi|24986118|gb|AAN69972.1|AE016635_8 flagella basal body P-ring formation protein FlgA [Pseudomonas
           putida KT2440]
          Length = 225

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +     + E  +   +     +   +   +   VG
Sbjct: 88  WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 143

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    L +  V+ +G +V II   G++++   G ALS   + + I V+
Sbjct: 144 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 203

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 204 NLNSKRVVKARVTGPGQVEVSM 225


>gi|260564304|ref|ZP_05834789.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
 gi|265989512|ref|ZP_06102069.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|260151947|gb|EEW87040.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
 gi|263000181|gb|EEZ12871.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 157

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 33  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 92

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 93  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 152

Query: 148 RVVVK 152
           +V ++
Sbjct: 153 QVGMQ 157


>gi|163744350|ref|ZP_02151710.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
 gi|161381168|gb|EDQ05577.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
          Length = 219

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 60/129 (46%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           FA V     VP   +   +++ E  L  M++    I        ++V+G   RRVL P  
Sbjct: 89  FALVTMPVPVPVTRLLPDDIIMEDDLAIMRLPVGRIGAYVITDAEEVIGKQVRRVLTPGR 148

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            I    +  P VI+RG +V I  + G + +S+ G AL DA  G  I + N+ +   V+G 
Sbjct: 149 PIQTQSIIHPLVINRGERVDIYFSDGLLALSSPGRALDDAHEGQEIRIVNLVSNKTVTGI 208

Query: 141 VVDTGTVRV 149
               GTV +
Sbjct: 209 ATGEGTVEI 217


>gi|163844347|ref|YP_001622002.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           suis ATCC 23445]
 gi|163675070|gb|ABY39180.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 160

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VVPSATVYPGQIVSDTVLLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|254491860|ref|ZP_05105039.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxidans DMS010]
 gi|224463338|gb|EEF79608.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxydans DMS010]
          Length = 232

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV     +   V    VV +  + A E L+++ +    +    +R  Y  S   V+G
Sbjct: 95  WTVYVPVKVKVLQPV----VVAARSLVANETLSKADITLEMMDIGELRQGYIQSTDKVIG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +  L     +P   L +  VI RG ++ ++ + G+M +   G A+ DAS+G+ + VK
Sbjct: 151 QQLKYPLSMGMALPPRGLKQEKVIRRGEQIILVASAGSMEVRMNGTAMGDASVGEKVKVK 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  +V G V   G V+V +
Sbjct: 211 NSSSKRVVEGIVHAPGVVKVTM 232


>gi|188579868|ref|YP_001923313.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium populi BJ001]
 gi|179343366|gb|ACB78778.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium populi BJ001]
          Length = 162

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+ + +S L+      +   R     +   + G   RR+LLP   +P++ + 
Sbjct: 39  VPTVTIYPGDTIKDSMLRMQAYPATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAVD 98

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++SRGA  ++I  +  + I+  G  L +  +G+ I V+N DT  +V G+V   G +R
Sbjct: 99  DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIVLGTVTADGRIR 158

Query: 149 V 149
           +
Sbjct: 159 I 159


>gi|94263286|ref|ZP_01287102.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
 gi|93456369|gb|EAT06493.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
          Length = 242

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 64/138 (46%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
                +     +G  VV +  IN GE++    L   +   SN+  N+    ++ VG   R
Sbjct: 105 AEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDSNFVSDPREAVGKQLR 164

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
             + P  V+  S L  P ++ RG +VRII  QG + +S  G      + G+++ V+N+ +
Sbjct: 165 TTIQPGAVLHQSRLENPPLVRRGDRVRIIAHQGRVRVSAPGEVRDIGAEGELVRVRNLMS 224

Query: 134 GVMVSGSVVDTGTVRVVV 151
              +   V+D  TV  ++
Sbjct: 225 RQEIQARVIDGSTVETIL 242


>gi|289627754|ref|ZP_06460708.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647434|ref|ZP_06478777.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330866413|gb|EGH01122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 222

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222


>gi|153837099|ref|ZP_01989766.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ3810]
 gi|149749687|gb|EDM60432.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AQ3810]
          Length = 179

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +SV    VV +  +   EV+  + LK    T S    ++    K  +GL T R L 
Sbjct: 47  VTIKSSVTLPVVVATTTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 105

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V+  + L  P +I +G ++ II ++   + ST G+AL D + G  I V+N+ +G ++
Sbjct: 106 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 165

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 166 RAVVTGRNQVHT 177


>gi|127512273|ref|YP_001093470.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           loihica PV-4]
 gi|126637568|gb|ABO23211.1| SAF domain protein [Shewanella loihica PV-4]
          Length = 235

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            S+   V+   VV +  +  G+++   +++   V  S +RG        V G   +R + 
Sbjct: 105 ISVRVEVLFPVVVANQTLGPGDLIESDQIRLDYVEQSQLRGQQFDDPVAVTGTRVKRRIP 164

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +  S L     + +G  V I     N  I T G AL D ++GD I V+N  +   V
Sbjct: 165 ANQPLFASNL---CFVCKGDIVAIYARADNFVIKTNGEALKDGNLGDKIQVRNSRSNKTV 221

Query: 138 SGSVVDTGTVRVVV 151
              V   G V V +
Sbjct: 222 DAHVTGIGEVEVRM 235


>gi|298487866|ref|ZP_07005906.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157591|gb|EFH98671.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 252

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 115 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLASLDQAVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 171 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 231 NLNSQRVIKANVTGPGQVEVAM 252


>gi|257484959|ref|ZP_05639000.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331011033|gb|EGH91089.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 222

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVIIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222


>gi|323975934|gb|EGB71028.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TW10509]
          Length = 252

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 63/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 159

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + + +GL ++  L P   +    L  P +I R   V I+     +T S  G+AL + 
Sbjct: 160 LMDLNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNG 219

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 220 RKGEMVKVRNASSQRVISAIVAESGVVTTVS 250


>gi|331006029|ref|ZP_08329371.1| Flagellar basal-body P-ring formation protein flgA [gamma
           proteobacterium IMCC1989]
 gi|330420158|gb|EGG94482.1| Flagellar basal-body P-ring formation protein flgA [gamma
           proteobacterium IMCC1989]
          Length = 241

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y   L S+  SV    +V +  +  G ++ ++ +         +R  Y      V+G
Sbjct: 104 WAIYTKHLVSIKKSV----LVINKNLPKGHIVTDTDINYSTKNIRTLRNGYISDKSFVLG 159

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     I    L    +I +G KV I    G++T+ T+G AL +   G+ I VK
Sbjct: 160 SQLKRPVREGQPIYSHQLEPIELIKKGDKVNISAKVGSLTVVTSGTALDNGRKGEQIDVK 219

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   ++   +V V++
Sbjct: 220 NLRSSRIIRTKIIGASSVEVIL 241


>gi|229592136|ref|YP_002874255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           fluorescens SBW25]
 gi|229364002|emb|CAY51553.1| putative flagella basal body P-ring formation protein [Pseudomonas
           fluorescens SBW25]
          Length = 236

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  V    VV +  +    ++    +   +   S I   Y  S+   VG
Sbjct: 99  WTVFVPAQVKLFRDV----VVVARPMKRTGIIGFEDVVLRERDISMISQGYLTSLDQAVG 154

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI L  L +  VI +G +V I  + G + +   G ALS+  + + I VK
Sbjct: 155 QKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGGLNVKMPGEALSNGGMSEQIRVK 214

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++   V   G V V +
Sbjct: 215 NLNSNRVIKARVTAPGQVEVAL 236


>gi|256043074|ref|ZP_05446018.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 159

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 35  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 94

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 95  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 154

Query: 148 RVVVK 152
           +V ++
Sbjct: 155 QVGMQ 159


>gi|330892071|gb|EGH24732.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. mori str. 301020]
 gi|330986458|gb|EGH84561.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 222

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222


>gi|256158117|ref|ZP_05456035.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
 gi|256252929|ref|ZP_05458465.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|261220020|ref|ZP_05934301.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|265996634|ref|ZP_06109191.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
 gi|260918604|gb|EEX85257.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti B1/94]
 gi|262550931|gb|EEZ07092.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           ceti M490/95/1]
          Length = 160

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           V+P   +  G++++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 36  VMPLATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 96  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155

Query: 148 RVVVK 152
           +V ++
Sbjct: 156 QVGMQ 160


>gi|293408363|ref|ZP_06652202.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471541|gb|EFF14024.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 245

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 63/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNISAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQNAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVEESGVVTTVS 243


>gi|77460475|ref|YP_349982.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           fluorescens Pf0-1]
 gi|77384478|gb|ABA75991.1| putative flagella basal body P-ring formation protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 232

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  +    V  +  +    ++    +   +   S I   +  S+ + +G
Sbjct: 95  WTVFVPAQVRLFREI----VTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R  + D VI L  L +  V+ +G +V I    G + +   G AL++  + + I VK
Sbjct: 151 QKLTRPTVADQVITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVK 210

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++   VV  G V V +
Sbjct: 211 NLNSQRVIKAQVVAPGQVEVAM 232


>gi|104782850|ref|YP_609348.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           entomophila L48]
 gi|95111837|emb|CAK16561.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
           entomophila L48]
          Length = 249

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L   V    VV +  +    V+++  +   +     +   Y   ++  VG
Sbjct: 112 WTVFVPTQVRLLREV----VVMTRPLKRESVIDQGDVALRERDVGTLTQGYLTQLEQAVG 167

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +   R  + D V+    + +  VI +G +V I+   G++++   G AL    +   I V+
Sbjct: 168 MKLVRPTVLDQVLTQQHMEQADVIRKGDQVVIVARSGSLSVRMPGEALDKGGMEAQIRVR 227

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  +V   V   G V V +
Sbjct: 228 NLNSKRVVKARVTGPGQVEVAM 249


>gi|71735190|ref|YP_275572.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71555743|gb|AAZ34954.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 252

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V+         +    ++ E  +   +   S++   +  S+   VG
Sbjct: 115 WTVFVPAQVLLYRNVVTVI----RPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 171 QTVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 231 NLNSQRVIKANVTGPGQVEVAM 252


>gi|320325083|gb|EFW81152.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329342|gb|EFW85335.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330880507|gb|EGH14656.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 222

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+ +V+         +    ++ E  +   +   S++   +  S+   VG
Sbjct: 85  WTVFVPAQVLLYRNVVTVI----RPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G++ +   G A+SD    + I VK
Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222


>gi|312962594|ref|ZP_07777084.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
           fluorescens WH6]
 gi|311283174|gb|EFQ61765.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
           fluorescens WH6]
          Length = 254

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+  V    VV +  +    ++    +   +   S I   Y  S+   +G
Sbjct: 117 WTVFVPAQVKLYRDV----VVVARPLKRTSIIGFEDVVLRERDISQINQGYLTSLDQALG 172

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI L  L +  VI +G +V I  + G + +   G ALS+  + + I VK
Sbjct: 173 QKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGTLNVKMPGEALSNGGMSEQIRVK 232

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++   V   G V V +
Sbjct: 233 NLNSNRVIKARVTAPGQVEVAL 254


>gi|83312593|ref|YP_422857.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Magnetospirillum magneticum AMB-1]
 gi|82947434|dbj|BAE52298.1| Flagellar basal body P-ring biosynthesis protein [Magnetospirillum
           magneticum AMB-1]
          Length = 324

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           + VRF +  S+Y  +   + A  +G           G+V+ E  ++ + V    +R +  
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGDVIREDDIQWVDVREEVVRRDII 225

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            + + +VG   R  L     +  + + +P V+++ + V I+L    MT++  G A+ D S
Sbjct: 226 SNARMLVGQEPRYQLRAGVPVRTNEVQKPVVVAKNSSVTIMLRSKFMTLTAQGRAIEDGS 285

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +GDVI V N+ +   V   +   G V V+
Sbjct: 286 VGDVIRVTNVQSKQTVDAKIEGPGQVSVM 314


>gi|328545504|ref|YP_004305613.1| flagellar basal body P-ring biosynthesis protein-like protein
           [polymorphum gilvum SL003B-26A1]
 gi|326415245|gb|ADZ72308.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 154

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%)

Query: 8   LFFSLYVLSLDSLFASVIGHAV-----VPSVVINAGEVLNESRLKEMQVTNSNIRG-NYA 61
           L   +++  + +  A     A      VP V I+ G+ +    L E +   +  R     
Sbjct: 5   LLICVFIAGMAASAALSGARAAGIDLPVPRVTIHPGDEIGADLLIERRFPANTTRQFAIV 64

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D+VG+V RR LLP   +PL  +    ++ RG   R++  +G + I T   AL    
Sbjct: 65  TSPRDLVGMVARRTLLPGQPVPLGAVAPVMLVKRGEPARLVFKEGGLFIMTQVEALQSGG 124

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147
            G V+ V+N+D+GV+V+G+V   G++
Sbjct: 125 AGAVVRVRNVDSGVIVTGTVQADGSI 150


>gi|237799198|ref|ZP_04587659.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806217|ref|ZP_04592921.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331022053|gb|EGI02110.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027330|gb|EGI07385.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 252

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF +V    V     +    ++ E  +   +   S++   +  S+   VG
Sbjct: 115 WTVFVPAQVQLFRNV----VTVMRPLKRDAIVTEQDVAMRERDVSSLGQGFLASLDQAVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+    L +P +I +G +V II   G + +   G A+SD    + I VK
Sbjct: 171 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGFNEQIRVK 230

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  SV   G V V +
Sbjct: 231 NLNSQRVIKASVTGPGQVEVAM 252


>gi|325295400|ref|YP_004281914.1| flagella basal body P-ring formation protein FlgA
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065848|gb|ADY73855.1| flagella basal body P-ring formation protein FlgA
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 321

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A +    I  G+++  S +K  +V +   R +   S+ +V+G + +R +    VI ++ L
Sbjct: 198 ATIAVKDIPKGKLITYSDVKIEKVPSKKARKSAI-SLNEVIGKIAKRDIKKGEVIKITDL 256

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              YV+ R   V+II    N+ I   GIAL + +IGD+I +KNI TG ++   V+  G V
Sbjct: 257 SPNYVVWRNKPVKIIYDIHNIHIELLGIALENGAIGDIIRIKNISTGKVLICKVIGNGIV 316

Query: 148 RVVVK 152
           + V K
Sbjct: 317 KFVYK 321


>gi|260774932|ref|ZP_05883833.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609187|gb|EEX35345.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 248

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV     +  +  G  V     ++ G++++   +    V     R     +I  V+G
Sbjct: 114 WKLYVP----VRLTRSGPQVTLVGPLSRGQIISRQDVTINMVDLQRFRRQGFSNIDAVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T++ L    VI  + +    V+ R   V I   +  MTI+T G AL+D S G+ I VK
Sbjct: 170 AKTKKNLRAGEVIESNDI---CVVCRNETVTIKAVKSGMTITTKGTALTDGSHGEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     V V+
Sbjct: 227 NTKSNRIIEGRVTGISEVTVI 247


>gi|110677664|ref|YP_680671.1| flagellar basal body P-ring biosynthesis protein FlgA [Roseobacter
           denitrificans OCh 114]
 gi|109453780|gb|ABG29985.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter denitrificans OCh 114]
          Length = 140

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 9/146 (6%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R  L   L  L L +LFA V    VVP+  I A   +  S +    + N N        
Sbjct: 2   IRLALISWLMCLPL-ALFAEV----VVPAKTIRANATITASDITLKPIQNENA----YTL 52

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + DVVG   R  L     I    +  P ++SR   V +      + I T G AL    +G
Sbjct: 53  MADVVGQEARTTLYAGRPILFDDIGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVG 112

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
           D + + N+D+   + G V   G+VRV
Sbjct: 113 DRVRIMNLDSRATLFGQVQADGSVRV 138


>gi|83858807|ref|ZP_00952329.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853630|gb|EAP91482.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 315

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 55/136 (40%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
               S  A  +    V +  I  G+ +  + +  +++  + +RG    +   +VG+  RR
Sbjct: 169 PLTVSGRAQRVADVPVLNRTIARGDTITAADVDWVRLPENQVRGEIILAETGLVGMTARR 228

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L  D  +    +  P V+ RG  V ++   G +T+S    AL +   G  I   N+ + 
Sbjct: 229 ALTADRPVRSYDVEPPVVVERGELVSLVYQVGPLTLSAQARALENGGEGQFIRFVNLQSN 288

Query: 135 VMVSGSVVDTGTVRVV 150
             V   V   G   V+
Sbjct: 289 RTVEAWVEGPGRASVL 304


>gi|330811241|ref|YP_004355703.1| flagella basal body P-ring formation protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379349|gb|AEA70699.1| Putative flagella basal body P-ring formation protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 254

 Score =  117 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF  +    V  +  +    ++    +   +   S I   +  S+   +G
Sbjct: 117 WTVFVPAQVRLFREI----VTTTRPLKRAGIVEPQDVMLRERDISQITQGFLTSVDQAIG 172

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D V+ L  L +  V+ +G +V I    G++ +   G ALS+  + + I VK
Sbjct: 173 QKLVRPMVADQVVTLVHLEQAEVVRKGDQVVITARTGSLAVRMPGEALSNGGMREQIRVK 232

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++   V+  G V V +
Sbjct: 233 NLNSQRVIKAQVMAPGQVEVAM 254


>gi|306813308|ref|ZP_07447501.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           NC101]
 gi|305854071|gb|EFM54510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           NC101]
          Length = 245

 Score =  117 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 60/151 (39%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R   
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|300936121|ref|ZP_07151060.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
 gi|300458699|gb|EFK22192.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
          Length = 252

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S      
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQHREV 159

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L  P ++ R   V I+     ++ S  G+AL + 
Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGISASMPGVALKNG 219

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 220 RKGEMVKVRNASSQRVISARVAESGVVTTVS 250


>gi|83647408|ref|YP_435843.1| flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
 gi|83635451|gb|ABC31418.1| Flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
          Length = 236

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)

Query: 10  FSLYVLSLDSLFAS-VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
           + +YV      +   V   + VP         L    L+  ++   ++R  +  + +DVV
Sbjct: 99  WQIYVPVQMERYRQIVTIKSAVP-----RDYALAPEDLETKELNIIDLRYGFYTNAEDVV 153

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G++TRR +        ++L  P +I++G  V I     + ++   G+A++D   G  I V
Sbjct: 154 GMITRRPVNAGSAPYPNMLEAPKLINKGDMVVIEAATHHFSVKMPGVAMADGRRGQQIMV 213

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
           KN  +  MV   V+ +G VR 
Sbjct: 214 KNSSSNRMVRAEVIGSGHVRT 234


>gi|17989430|ref|NP_542063.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985307|gb|AAL54327.1| flagella basal body p ring formation protein flga [Brucella
           melitensis bv. 1 str. 16M]
          Length = 137

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VVPS  +  G +++++ L E Q   N+     Y  S+   VG V R+ LLP   I +S L
Sbjct: 13  VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 72

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P +++RG    ++ T G +TI+  G  L     GD I V+N+D+G++VSG+V+  G +
Sbjct: 73  GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 132

Query: 148 RVVVK 152
           +V ++
Sbjct: 133 QVGMQ 137


>gi|330502728|ref|YP_004379597.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina NK-01]
 gi|328917014|gb|AEB57845.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           mendocina NK-01]
          Length = 234

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   L+  V    VV +  +    V+  S L  M+     +  N+       +G
Sbjct: 97  WTVFVPAEIRLYRPV----VVLTRPLKRMSVVKASDLSMMERDVGPLGQNFLTDPTQAIG 152

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L  D V+  S L    VI RG +V I      + +   G AL+D + G+ I V+
Sbjct: 153 KKLTRQLGGDQVLAPSHLQIAEVIRRGDQVVISARGTTVNVRMPGEALTDGAPGEQINVR 212

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  +V   VV  G V V +
Sbjct: 213 NLRSQRVVRARVVGPGQVEVAM 234


>gi|261856134|ref|YP_003263417.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
           neapolitanus c2]
 gi|261836603|gb|ACX96370.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
           neapolitanus c2]
          Length = 255

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV +        + +A+  +  +  G  ++   L    V  +     Y  S  + +G
Sbjct: 119 WRIYVPARI----QTMVNAISLARPLAPGTRISAEDLTTTPVNANQQVNAYLTSPDEAIG 174

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            +  R +    ++    L    VI RG  V +I   GN+++ST G+A +DA +G  I VK
Sbjct: 175 QIVTRPMQAGQILTQQDLGIAKVIHRGDHVTVIAGTGNVSVSTEGVAQADAGVGQRIMVK 234

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N  +G +V G V D  TV
Sbjct: 235 NSRSGQLVEGFVRDANTV 252


>gi|331645414|ref|ZP_08346518.1| SAF domain protein [Escherichia coli M605]
 gi|331045576|gb|EGI17702.1| SAF domain protein [Escherichia coli M605]
          Length = 252

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R   
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 159

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L    ++ R   V I+     +T S  G+AL + 
Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISAVLVERDQPVMIVYQSAGITASMPGVALKNG 219

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250


>gi|163733144|ref|ZP_02140588.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter litoralis Och 149]
 gi|161393679|gb|EDQ18004.1| flagella basal body P-ring formation protein FlgA, putative
           [Roseobacter litoralis Och 149]
          Length = 140

 Score =  116 bits (292), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +RF L  S  V S   +FA V    VVP+  I A   ++ S +    + N N        
Sbjct: 2   IRFALI-SWLVCSPFFVFAEV----VVPAKTIRANATISASDITLKPIKNENA----YSL 52

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           + DVVG   R  L     I    +  P ++SR   V +      + I T G AL    +G
Sbjct: 53  MADVVGQEARTTLYAGRPILFDDVGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVG 112

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
           D + + N+D+   + G V   G++RV
Sbjct: 113 DRVRIMNLDSRATLFGQVQADGSIRV 138


>gi|301646809|ref|ZP_07246661.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|331640709|ref|ZP_08341856.1| SAF domain protein [Escherichia coli H736]
 gi|301075002|gb|EFK89808.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|331040083|gb|EGI12291.1| SAF domain protein [Escherichia coli H736]
          Length = 252

 Score =  116 bits (292), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 61/151 (40%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R   
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREV 159

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 160 LMELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 219

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250


>gi|254230144|ref|ZP_04923539.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
 gi|151937337|gb|EDN56200.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
           sp. Ex25]
          Length = 262

 Score =  116 bits (292), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +I    V +  +  GE+++ S +    +     R +   +   VVG
Sbjct: 128 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 183

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I      MTI+T G AL D + GD + VK
Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 240

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     + V
Sbjct: 241 NDKSQRIIEGIVTGIAEITV 260


>gi|323191534|gb|EFZ76795.1| lateral flagellar P-ring addition protein [Escherichia coli
           RN587/1]
          Length = 245

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 61/151 (40%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L E+ ++      S  R   
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTENDVELKPYNVSAQRREV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|224370759|ref|YP_002604923.1| FlgA [Desulfobacterium autotrophicum HRM2]
 gi|223693476|gb|ACN16759.1| FlgA [Desulfobacterium autotrophicum HRM2]
          Length = 310

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 62/129 (48%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           +  +    V  +  ++ GE+L    L   ++  S I  NY   +  +VG+  ++ L  + 
Sbjct: 180 YVDLYDRVVCATRNLSRGEILAPKDLCLKRINVSKIPDNYLTRLDSLVGMRLKQSLASNG 239

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
               +++    +I+RG  V ++  +GNM I   G+A  +  +GD I V N+ T  +VSG 
Sbjct: 240 FFRENMVEDSPLINRGDNVVLVARKGNMRIVATGVADQEGRLGDQIQVNNLTTNRVVSGR 299

Query: 141 VVDTGTVRV 149
           +    TV V
Sbjct: 300 ISGPKTVDV 308


>gi|23015789|ref|ZP_00055556.1| COG1261: Flagellar basal body P-ring biosynthesis protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 324

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           + VRF +  S+Y  +   + A  +G           GEV+ E+ ++ ++V    +R +  
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGEVIAEADIQWVEVREEVVRRDIV 225

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            + + ++G   R  L     +  + + +P  + + + V I+L    MT++  G A+ D S
Sbjct: 226 SNPRMLIGQEPRYQLRAGVPVRTNEVQKPLAVGKNSSVTIVLRSKFMTLTAQGRAMEDGS 285

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           +GDVI V N+ +   V   +   G V V+ 
Sbjct: 286 VGDVIRVTNVQSKQTVDARIEGPGQVSVMS 315


>gi|59889777|emb|CAH19132.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli]
 gi|284920041|emb|CBG33097.1| lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
           coli 042]
          Length = 245

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R   
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGLSSKHALQPGKPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
             G+++ V+N  +  ++S  V ++G V  V
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTV 242


>gi|327254550|gb|EGE66166.1| lateral flagellar P-ring addition protein [Escherichia coli
           STEC_7v]
          Length = 236

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 63/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 84  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 143

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + + +GL ++  L P   +    L  P +I R   V I+     +T S  G+AL + 
Sbjct: 144 LMDLNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNG 203

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 204 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 234


>gi|256020224|ref|ZP_05434089.1| flagella basal body P-ring formation protein FlgA [Shigella sp. D9]
 gi|260853462|ref|YP_003227353.1| putative lateral flagellar P-ring addition protein [Escherichia
           coli O26:H11 str. 11368]
 gi|260866409|ref|YP_003232811.1| putative lateral flagellar P-ring addition protein [Escherichia
           coli O111:H- str. 11128]
 gi|307313523|ref|ZP_07593144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|331666542|ref|ZP_08367416.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
 gi|332281386|ref|ZP_08393799.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
 gi|257752111|dbj|BAI23613.1| predicted lateral flagellar P-ring addition protein [Escherichia
           coli O26:H11 str. 11368]
 gi|257762765|dbj|BAI34260.1| predicted lateral flagellar P-ring addition protein [Escherichia
           coli O111:H- str. 11128]
 gi|306906691|gb|EFN37202.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|315059538|gb|ADT73865.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli W]
 gi|323158107|gb|EFZ44206.1| lateral flagellar P-ring addition protein [Escherichia coli
           EPECa14]
 gi|323178498|gb|EFZ64076.1| lateral flagellar P-ring addition protein [Escherichia coli 1180]
 gi|323379903|gb|ADX52171.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           KO11]
 gi|331065766|gb|EGI37650.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
 gi|332103738|gb|EGJ07084.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
          Length = 245

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 63/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|323495383|ref|ZP_08100460.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
 gi|323310306|gb|EGA63493.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
          Length = 248

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     +  +  G  VV +  ++ G++++   +    V     R     SI  V+G
Sbjct: 114 WRVYVP----VRLTRTGPQVVLTSALSRGQLISGQDVTISMVDLQRFRRQGFSSIDAVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L    ++    +    V+ R   V I   +  MTI+T G+AL+D S G+ I VK
Sbjct: 170 AKAKKNLRAGEILEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     V V+
Sbjct: 227 NSKSNRIIEGRVTGISEVTVI 247


>gi|307136854|ref|ZP_07496210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H736]
 gi|315616831|gb|EFU97448.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           3431]
          Length = 245

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 61/151 (40%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R   
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|319403962|emb|CBI77550.1| Flagellar protein flgA (fragment) [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 109

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 53/99 (53%)

Query: 51  VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110
              S+    Y   +K ++  V +R L     IPLS L  P ++ RG   ++I    N+ I
Sbjct: 9   FIKSDAASLYVTDMKQILHKVAKRTLTAGRPIPLSSLGDPVLVERGQATKLIFQTHNLQI 68

Query: 111 STAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +  G+ L   S GDVI V+N D+G +V+G+V+  G VRV
Sbjct: 69  TALGVVLQSGSSGDVIRVRNSDSGRVVTGTVLQNGDVRV 107


>gi|14581460|gb|AAK31635.1| FlgA [Pseudomonas aeruginosa]
          Length = 188

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++++ +   LF  V    VV    +    VL ++ +  ++     +   Y      VVG
Sbjct: 51  WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 106

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR ++ D V+    L +   + +G +V I+     + +   G ALSD + G  I V+
Sbjct: 107 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 166

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +  ++   V++ GTV V +
Sbjct: 167 NLRSQRIIKARVIEPGTVEVNM 188


>gi|163784419|ref|ZP_02179303.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880310|gb|EDP73930.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 317

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
              AVV    I  G +++   +K  +V   N    Y  +I  ++G   R  +     I L
Sbjct: 189 TTKAVVAKRYIPKGSIISYDDVKIDKVKAKN-DERYFTNINKLIGKKLRFAVKKGQPITL 247

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             L + Y + R   V ++  +    I   G AL +  +GD+I V+N  +G ++   V+  
Sbjct: 248 KYLEKEYYVFRNTNVEVLYEKNGFRIRLLGRALENGELGDLIRVRNTSSGKVILCKVIGK 307

Query: 145 GTVRVVV 151
             V+ + 
Sbjct: 308 NKVKFIS 314


>gi|117919766|ref|YP_868958.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. ANA-3]
 gi|117612098|gb|ABK47552.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. ANA-3]
          Length = 235

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV S  +  GE+++ ++++   +  +++RG       
Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELISPTQVEIRYIDQNSLRGMQFSDTS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  +  I  + L     + +   V I +   N  + T G AL D +IGD 
Sbjct: 153 QLSGVRVKRRVAKNFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235


>gi|330961187|gb|EGH61447.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 192

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++++V +   LF +V+         +    ++ E  +   +   S++   +  S+   VG
Sbjct: 55  WTVFVPAQVQLFRNVVTVV----RPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 110

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R ++ D VI    L +P +I +G +V II   G + +   G A+SD    + I VK
Sbjct: 111 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGFNEQIRVK 170

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+++  ++  +V   G V V +
Sbjct: 171 NLNSQRVIKANVTGPGQVEVAM 192


>gi|153001478|ref|YP_001367159.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS185]
 gi|151366096|gb|ABS09096.1| SAF domain protein [Shewanella baltica OS185]
          Length = 235

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V  L  +        VV +  +  GE+++ S+++   +  +++RG       
Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  D+ I  + L     + +   V I +   +  + TAG AL D + GD 
Sbjct: 153 KLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235


>gi|220934388|ref|YP_002513287.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995698|gb|ACL72300.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 262

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
            + +SLYV     +  +V G  VV    +  G  L    L+  +     + G Y + ++ 
Sbjct: 122 PVTWSLYVP----VHVAVHGEVVVLGHPLPRGMQLEAQHLRLERHDVGALPGGYLNDLEL 177

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
              +V RR L    V+   ++  P ++ RG +V ++     + +   G AL+D S G+ +
Sbjct: 178 ARDMVLRRALPAGTVLTPQMVEPPRLVRRGQRVTLLAEGSAVNVRVEGEALADGSRGERV 237

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
            V+N+ +  +V G V+  G V V +
Sbjct: 238 QVRNLSSRRVVEGVVLSHGVVGVRM 262


>gi|120598226|ref|YP_962800.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. W3-18-1]
 gi|146293696|ref|YP_001184120.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           putrefaciens CN-32]
 gi|120558319|gb|ABM24246.1| SAF domain [Shewanella sp. W3-18-1]
 gi|145565386|gb|ABP76321.1| SAF domain [Shewanella putrefaciens CN-32]
 gi|319427095|gb|ADV55169.1| flagella basal body P-ring formation protein FlgA [Shewanella
           putrefaciens 200]
          Length = 235

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV + ++  G+ +N S+++   +  +++RG       
Sbjct: 101 WQIFISVRVDILFPV--------VVTTEILAPGDRINASQIEVRYIEQNSLRGQQFDDPS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G   +R +  +  I  + L     + +   + I +   +  + TAG AL D +IG+ 
Sbjct: 153 QLEGTRVKRRIAKESPIFANNL---CFVCKNDAISIYVRSPSFMLKTAGEALQDGNIGEQ 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V+  G V V +
Sbjct: 210 IRVKNSSSNKQLDAIVIGIGEVEVRM 235


>gi|24374764|ref|NP_718807.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           oneidensis MR-1]
 gi|24349430|gb|AAN56251.1|AE015762_8 flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella oneidensis MR-1]
          Length = 235

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV +  +  GE+++ ++++   V  +++RG     I 
Sbjct: 101 WQIFISVRVDILFPV--------VVATEPLAPGELISPTQVEIRYVDQNSLRGMQFSDIN 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  ++ I  + L     + +   V I +   N  + T G AL D +IGD 
Sbjct: 153 QLSGVRVKRRVAKNNPIFANNL---CFVCKNDAVSIYVRSSNFVLKTVGEALQDGNIGDQ 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +  +V   G V V +
Sbjct: 210 IRVKNSSSNKELDATVTAIGEVEVRM 235


>gi|27381983|ref|NP_773512.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium japonicum USDA 110]
 gi|27355153|dbj|BAC52137.1| flgA [Bradyrhizobium japonicum USDA 110]
          Length = 175

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKD 66
           L   L VL    + A+      VP+V I AGE++ +  + E     + +    +    + 
Sbjct: 29  LAAVLLVLVSARVAAAEEKRLPVPAVSIRAGELIRDDMITERAFAPNLLGVAQFIEGRQI 88

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VG + RR LLP   IP + +  P+ ++RGA V++++    ++I T G A+   + G +I
Sbjct: 89  LVGRMARRALLPGQPIPTNSVEDPWTVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALI 148

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            V+N DTGV++ G V   GTV+VV
Sbjct: 149 PVRNTDTGVIIRGVVQPDGTVKVV 172


>gi|262394945|ref|YP_003286799.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
 gi|262338539|gb|ACY52334.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           Ex25]
          Length = 248

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +I    V +  +  GE+++ S +    +     R +   +   VVG
Sbjct: 114 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I      MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     + V
Sbjct: 227 NDKSQRIIEGIVTGIAEITV 246


>gi|121534937|ref|ZP_01666756.1| SAF domain [Thermosinus carboxydivorans Nor1]
 gi|121306536|gb|EAX47459.1| SAF domain [Thermosinus carboxydivorans Nor1]
          Length = 245

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 62/122 (50%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I A E+L    L+  +     +   Y    + V+GL  RR L P  VI  SVL 
Sbjct: 119 LVAARPIAAWEILTADSLQRERRDVGKLASGYITDEQKVLGLAARRSLTPGAVITDSVLA 178

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +P +I RG  + II   G + +  AG AL D + G VI V+NI +  ++S  V+D  +  
Sbjct: 179 KPVLIRRGQLIAIIARSGGIEVVAAGQALQDGAEGQVIRVQNIQSKKILSAQVLDNASAL 238

Query: 149 VV 150
           V+
Sbjct: 239 VL 240


>gi|304409984|ref|ZP_07391603.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|307302303|ref|ZP_07582061.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
 gi|304351393|gb|EFM15792.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|306914341|gb|EFN44762.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
          Length = 235

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V  L  +        VV +  +  GE+++ S+++   +  +++RG       
Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  D+ I  + L     + +   V I +   +  + TAG AL D + GD 
Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235


>gi|307945667|ref|ZP_07661003.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
           TrichSKD4]
 gi|307771540|gb|EFO30765.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
           TrichSKD4]
          Length = 326

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             + +G+VL    +   ++  + +  N     K + GL  R  L  +  +  +   +P +
Sbjct: 195 QPLRSGQVLRLEDMTTTRLPRTKVPANAVTDPKQIAGLAARTGLRANMPLVRNDFAKPVL 254

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           ISRG KV I    G M ++T G A+ D ++GD I +KN+D+G +V   V   G V
Sbjct: 255 ISRGEKVSITYMVGGMKLTTRGRAMDDGALGDPIDIKNLDSGRIVPAMVRSRGQV 309


>gi|126175152|ref|YP_001051301.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS155]
 gi|125998357|gb|ABN62432.1| SAF domain [Shewanella baltica OS155]
          Length = 235

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V  L  +        VV +  +  GE+++ S+++   +  +++RG       
Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  D+ I  + L     + +   V I +   +  + TAG AL D + GD 
Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235


>gi|297182935|gb|ADI19084.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
           proteobacterium HF0070_15B21]
          Length = 357

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 62/123 (50%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             V+    I A  V+ E+ + +++     +   Y    +D++G V  R + P+ VI  + 
Sbjct: 234 DVVIAKDTIKADHVIGEADILKVRRNVDRMPSKYVTDAQDILGKVASRAINPNEVIRETT 293

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +    V+  G ++ I+    N+ ++  G++L   ++GD I V+N+ + ++V  +V D   
Sbjct: 294 VAAQPVVKSGDRLMIVFETQNLRLTAPGMSLQKGALGDRIQVRNLQSKILVYATVRDKNH 353

Query: 147 VRV 149
           V+V
Sbjct: 354 VQV 356


>gi|323171059|gb|EFZ56708.1| lateral flagellar P-ring addition protein [Escherichia coli LT-68]
          Length = 245

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 62/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 HKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|156973578|ref|YP_001444485.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           harveyi ATCC BAA-1116]
 gi|156525172|gb|ABU70258.1| hypothetical protein VIBHAR_01281 [Vibrio harveyi ATCC BAA-1116]
          Length = 248

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   +   V+G
Sbjct: 114 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +G MTI+T G AL D S GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     + + 
Sbjct: 227 NDKSQRIIEGIVTGIAEITIT 247


>gi|54307266|ref|YP_128286.1| hypothetical protein PBPRA0029 [Photobacterium profundum SS9]
 gi|46911686|emb|CAG18484.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 253

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 4/143 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
             ++     +  +++  +    VV  + +N  + +    L   +   + +R  Y  S + 
Sbjct: 113 PTYWKARAKAEVAIYRQL----VVAKMTLNRHQEITPLMLSMKRSNVAYLRHGYFTSKQA 168

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           + GL +RR ++   +I   ++ +P ++ R   V I    G M  +  G+AL     GD I
Sbjct: 169 LTGLTSRRKIVAGKIISPRMVEQPKLVQRNDGVLIEAKFGKMNATMKGVALESGVKGDSI 228

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N+ +   +   +V    VR 
Sbjct: 229 RVRNLSSQKEIYAIIVGPQKVRT 251


>gi|308050378|ref|YP_003913944.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
 gi|307632568|gb|ADN76870.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
          Length = 234

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV         V    VV +  +NA  +L    L+      + +RG        +VG
Sbjct: 100 WSLYVPVQTRFEYPV----VVATTTLNADAILEPQHLRVEYRDANTLRGKTVSDPSQLVG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +     +  + +    ++  G  V I    G + I T+G A    ++GD I V+
Sbjct: 156 ARLVRRIGNGQPVSSNNI---CLVCSGDLVTIYARTGGIEIKTSGEARGSGALGDTIRVQ 212

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N  +  ++   VV  G V V +
Sbjct: 213 NSRSQRIIDARVVGIGEVEVRM 234


>gi|145297451|ref|YP_001140292.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850223|gb|ABO88544.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 226

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
             + L      +L   V     V +  I  G+ +    L E  +  S ++  +  S + +
Sbjct: 87  PAWQLRARVEVTLMLPVW----VTAQEIQKGQAIRAGDLVEKSLDISRLQRGFVPSSESL 142

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           VG  + R L    +I    L + + +  G  V I       + +T G AL++ +IGD I 
Sbjct: 143 VGSKSTRNLRMGQLIGELDLQKAWAVREGEGVLIRAGLDGFSATTRGKALANGAIGDGIK 202

Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
           V+NI +G  +   V+D G V  
Sbjct: 203 VRNISSGKEIQAWVIDKGEVET 224


>gi|160876209|ref|YP_001555525.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS195]
 gi|160861731|gb|ABX50265.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS195]
 gi|315268399|gb|ADT95252.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS678]
          Length = 235

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V  L  +        VV +  +  GE+++ S+++   +  +++RG       
Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  D+ I  + L     + +   V I +   +  + TAG AL D + GD 
Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235


>gi|91792658|ref|YP_562309.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           denitrificans OS217]
 gi|91714660|gb|ABE54586.1| Flageller protein FlgA [Shewanella denitrificans OS217]
          Length = 235

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 7/143 (4%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            + +Y+     +   V    VV   V++ G ++    L    V   ++RG +   I+ ++
Sbjct: 100 LWQVYISVRVEILYPV----VVADNVLSPGALITRDSLNIAFVDQYSLRGQFFTEIEQII 155

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G   +R +  D  I    L     + +G  V I     N+ I T+G AL+D + GD I V
Sbjct: 156 GSRVKRRVAKDAPILSGNL---CFVCKGDPVSIFARTENIVIKTSGEALNDGNEGDTIRV 212

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           KN  +   +   V   G V V +
Sbjct: 213 KNSISNRELDAQVTGIGEVEVKM 235


>gi|152995098|ref|YP_001339933.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Marinomonas sp. MWYL1]
 gi|150836022|gb|ABR69998.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Marinomonas sp. MWYL1]
          Length = 230

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 60/132 (45%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +  S++  A+     IN G+ +++S     +V  S++RG+         GL+  R L 
Sbjct: 97  VPVTQSIMIPAIKTITPINRGQAISKSNTDVGEVDISSLRGHVYTKKNPPYGLIASRNLR 156

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  I   + ++P ++ +G  V I  + G + +   G+AL +   G  I VKN  +  ++
Sbjct: 157 INTFITDDLTNQPTLVKKGDSVLITASSGTIIVRMNGVALENGIKGQQIRVKNTSSERII 216

Query: 138 SGSVVDTGTVRV 149
              VV    V V
Sbjct: 217 YAKVVTDSEVLV 228


>gi|296283229|ref|ZP_06861227.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Citromicrobium bathyomarinum JL354]
          Length = 156

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 19  SLFASVIGHAVVP---SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +L A   G  VV    +  I  G++L+E      +VT +  RG+ A   +   G+  RR 
Sbjct: 22  ALHAQSTGDGVVADVLTRPIQRGDLLSERDFAPEEVTAAQARGSLA--AQQAAGMEARRT 79

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L     +  S L  P ++ RG  V+I + +G +TI+  G AL+DA++G+ + V +  T  
Sbjct: 80  LRAGMPVRASDLAEPRLVKRGETVKISVREGALTITAMGRALADAALGEQVRVFSEATNQ 139

Query: 136 MVSGSVVDTGTVRVVV 151
            + G V   GTVRV+ 
Sbjct: 140 TLQGVVEGAGTVRVLA 155


>gi|217972592|ref|YP_002357343.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           baltica OS223]
 gi|217497727|gb|ACK45920.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS223]
          Length = 235

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V  L  +        VV +  +  GE+++ S+++   +  +++RG       
Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPG 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +  D+ I  + L     + +   V I +   +  + TAG AL D + GD 
Sbjct: 153 KLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235


>gi|253702431|ref|YP_003023620.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M21]
 gi|251777281|gb|ACT19862.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M21]
          Length = 246

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 59/132 (44%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +   VV +  +  GEVL+ S L   +   S  RG Y     D VGL  +  L 
Sbjct: 113 VQVEVEALADMVVAARTLERGEVLSASDLAVAKRDLSLARGGYLKEPDDAVGLRVKTTLR 172

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +    L +  V+  G  V I+     + ++ +G A    + GDVI V+N+ +   +
Sbjct: 173 ANTPVRKDNLEKVPVVKSGQMVTILAENDVVRVTASGRAKGAGAPGDVITVQNLSSQKDI 232

Query: 138 SGSVVDTGTVRV 149
           +  VVD  TV+V
Sbjct: 233 AARVVDAATVKV 244


>gi|149908763|ref|ZP_01897424.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
           PE36]
 gi|149808305|gb|EDM68244.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
           PE36]
          Length = 269

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 54/120 (45%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
               IN  ++L +  ++  +   S     +  S + +V    +R +    +I  S L + 
Sbjct: 149 AKTDINPNQILKKQNIQLQRGVISRHTQRFITSSQQLVNQRAKRRIRSGKIILPSQLQQR 208

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            ++ R  +V I    G+  +S  G AL +  +GD I +KN+ +G  +   ++ +G V  +
Sbjct: 209 LLVERNDEVIIRAGSGSFVVSMKGKALQNGQLGDKIYIKNLSSGKKIQAKIIASGVVETL 268


>gi|315127359|ref|YP_004069362.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas sp. SM9913]
 gi|315015873|gb|ADT69211.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas sp. SM9913]
          Length = 213

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++ YV    +  A V    VV +  +  GEV+  S L         IR  Y      ++G
Sbjct: 79  WAQYVHVRITESAPV----VVATTNLARGEVITPSHLSIDMRPAHFIRAQYLEDPTALIG 134

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             ++R +     + L+ +    ++ +G  V I      + + T GIAL D ++G+ + V+
Sbjct: 135 SRSKRNIREGMPVLLNQI---CMVCKGDSVTIYANIKGLRVKTTGIALEDGTLGEQVRVE 191

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  TG +++  V    +V+V
Sbjct: 192 NKKTGKVLNARVDGVESVQV 211


>gi|119775456|ref|YP_928196.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           amazonensis SB2B]
 gi|119767956|gb|ABM00527.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella amazonensis SB2B]
          Length = 235

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S+ A V+   VV    +  G++L+   ++   V  + +RG     ++ + G   +R +  
Sbjct: 106 SVRAEVLFPVVVAKRPLGNGDLLDAESIEVRYVDKTLLRGQQFSHLQPLYGSRVKRRIPQ 165

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
           D  I    L     + +G  V I     +  I T G AL+D + GD I +KNI++  ++ 
Sbjct: 166 DAPIFADNL---CFVCKGDAVTIYAKSASFEIKTQGEALADGNEGDRIRIKNINSDRVLE 222

Query: 139 GSVVDTGTVRVVV 151
            +V+  G V V +
Sbjct: 223 ATVIGVGEVEVKM 235


>gi|74101654|gb|AAZ99744.1| FlgAL [Aeromonas hydrophila]
          Length = 270

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
             + L      +L   V     V +  I  G+ +    L E  +  S ++  +  S + +
Sbjct: 131 PAWQLRARVEVTLMLPVW----VTAQEIQKGQTIRTGDLVEKSLDISRLQRGFVPSSESL 186

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           VG  + R L    +I    L + + I  G  V I       + +T G AL++ +IGD I 
Sbjct: 187 VGSKSNRNLRMGQLIGELDLQKAWAIREGEGVLIRAGLDGFSATTRGKALANGAIGDGIK 246

Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
           V+NI +G  +   V++ G V  
Sbjct: 247 VRNISSGKEIQAWVIEKGEVET 268


>gi|153834451|ref|ZP_01987118.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
 gi|148869147|gb|EDL68179.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
           HY01]
          Length = 243

 Score =  113 bits (284), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   +   V+G
Sbjct: 109 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 164

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +G MTI+T G AL D S GD + VK
Sbjct: 165 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 221

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     + + 
Sbjct: 222 NDKSQRIIEGIVTGIAEITIT 242


>gi|296447437|ref|ZP_06889362.1| flagella basal body P-ring formation protein FlgA [Methylosinus
           trichosporium OB3b]
 gi|296255057|gb|EFH02159.1| flagella basal body P-ring formation protein FlgA [Methylosinus
           trichosporium OB3b]
          Length = 149

 Score =  113 bits (284), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 2/147 (1%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           +R  L F +       + A      +  P VVI  GE + +  L E    N    G    
Sbjct: 1   MRRALAFVIAAFVACPVVAGAQERMLPTPRVVIYPGEAIRDDMLAERAF-NGGAAGVVVE 59

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +   ++G V RR LLPD  IP+  +  P +++  A+V+I+     +TI   G AL    +
Sbjct: 60  TRSALIGKVARRTLLPDRPIPVMAVDSPRIVAVNAQVKIVFEVTGLTIVAYGAALQAGGV 119

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           GD I V+N D+G++V+G V   G++RV
Sbjct: 120 GDFIRVRNQDSGLVVTGRVQPDGSIRV 146


>gi|170021364|ref|YP_001726318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ATCC 8739]
 gi|188492061|ref|ZP_02999331.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
 gi|169756292|gb|ACA78991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ATCC 8739]
 gi|188487260|gb|EDU62363.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
          Length = 245

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +G  ++  L P   I    L  P ++ R   V I+     ++ S  G+AL + 
Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGISASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|300817274|ref|ZP_07097492.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
 gi|300530250|gb|EFK51312.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
          Length = 245

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 63/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +GL ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQWVISAMVAESGVVTTVS 243


>gi|260431747|ref|ZP_05785718.1| flagella basal body P-ring formation protein FlgA [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415575|gb|EEX08834.1| flagella basal body P-ring formation protein FlgA [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 138

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 6/138 (4%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           L V  L  LFA    + VVP+  I A EV+    LK                   +VG  
Sbjct: 6   LMVCLLCPLFAQA--NVVVPTRTIRAKEVITAEDLKIQPGDV----AGAVEDPDLLVGQE 59

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            R  L P   I  S +  P V+ R   V ++  +  +TI   G AL   ++G+ I   N+
Sbjct: 60  ARIALYPGRPIRASDVRAPAVVDRNDLVTLVFVKNGLTIEVEGRALGRGAVGERIRAMNL 119

Query: 132 DTGVMVSGSVVDTGTVRV 149
            +   V+G V   G + V
Sbjct: 120 SSRSAVTGKVGPDGQIEV 137


>gi|269965430|ref|ZP_06179549.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
 gi|269829909|gb|EEZ84139.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           alginolyticus 40B]
          Length = 266

 Score =  113 bits (283), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +I    V +  +  GE+++ S +    +     R +   S   VVG
Sbjct: 128 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 183

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I      MTI+T G AL D S GD + VK
Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 240

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++   V D   + V
Sbjct: 241 NDKSQRIIEXIVTDIAEITV 260


>gi|269961593|ref|ZP_06175955.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833634|gb|EEZ87731.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 248

 Score =  113 bits (283), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   ++  V+G
Sbjct: 114 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFSNMDQVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +  MTI+T G AL D S GD + VK
Sbjct: 170 SKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGSAGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     + + 
Sbjct: 227 NDKSQRIIEGIVTGIAEITIT 247


>gi|91225867|ref|ZP_01260836.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
 gi|91189517|gb|EAS75793.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
           alginolyticus 12G01]
          Length = 248

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +I    V +  +  GE+++ S +    +     R +   S   VVG
Sbjct: 114 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I      MTI+T G AL D S GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V D   + V
Sbjct: 227 NDKSQRIIEGIVTDIAEITV 246


>gi|114706772|ref|ZP_01439672.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
           pelagi HTCC2506]
 gi|114537720|gb|EAU40844.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
           pelagi HTCC2506]
          Length = 153

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAH 62
           ++  L  SL +       A+ +    VP VVI  G+ +  + L        + + G +  
Sbjct: 6   LKTALALSLGLSGATGSLAAELDMP-VPGVVIYPGQDIVAAGLSTRTFIVKDEKVGLFVV 64

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
             +D+ G V RR LLP   I  + L  P  +  G  V +I  +  + I+  G+AL     
Sbjct: 65  DREDLYGHVARRTLLPGKAIRRADLTTPDAVKAGTNVTLIYAEEGLVITGLGMALESGQE 124

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           G+ I V+N D+G+ +SG +   GT+ V
Sbjct: 125 GETIRVRNTDSGITISGRISPDGTIAV 151


>gi|89092130|ref|ZP_01165085.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum
           sp. MED92]
 gi|89083865|gb|EAR63082.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum
           sp. MED92]
          Length = 231

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
             + L++ +    +       V     +    VL    L   +   + +R  Y  S  ++
Sbjct: 93  PLWQLFIAAEIKQY----QFVVTAKNSLPRRTVLQAKDLVLEERDTTTLRSAYFLSTSEI 148

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G  ++R +    VI  S++  P  +++G  V I   +G++ I TA  AL +  IG  I 
Sbjct: 149 IGWSSKRSISTGAVITASMVKAPIAVTKGNAVIIEAKRGSVKIRTAATALENGEIGQQIK 208

Query: 128 VKNIDTGVMVSGSVVDTGTVR 148
           V+N  +G +V   VV  G VR
Sbjct: 209 VRNDRSGNIVKAVVVAPGLVR 229


>gi|90021861|ref|YP_527688.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Saccharophagus degradans 2-40]
 gi|89951461|gb|ABD81476.1| Flageller protein FlgA [Saccharophagus degradans 2-40]
          Length = 243

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+YV     +++ +    VV S  +  G  ++E+ L    +  +     +    + ++G
Sbjct: 106 WSIYVPVDIEVYSEI----VVASRTLRRGATISEADLNVQVINIARYGSGHVQDAQRIIG 161

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +     I LS +    V+S+G  V I +    + ++  G AL +  +G  I V+
Sbjct: 162 QELTRSVNAGEAIKLSHVRPAQVVSKGDTVVIEVRGNMIAVAVNGEALENGHVGKQIRVR 221

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +V G V   G V +
Sbjct: 222 NNQSKRVVDGVVSGPGRVSI 241


>gi|323181543|gb|EFZ66963.1| lateral flagellar P-ring addition protein [Escherichia coli 1357]
          Length = 245

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 62/151 (41%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++ + F +          ++   V+   V+   ++     L  + ++      S  R + 
Sbjct: 93  LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + D +G  ++  L P   I    L  P ++ R   V I+     +T S  G+AL + 
Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G+++ V+N  +  ++S  V ++G V  V 
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243


>gi|319790433|ref|YP_004152066.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
           ammonificans HB-1]
 gi|317114935|gb|ADU97425.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
           ammonificans HB-1]
          Length = 321

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +   VV +V+I  G  +  + +K   V  S    N  HS+K+VVG + R  +L
Sbjct: 188 IPVRIDRLEKVVVAAVLIPKGTKITPTMVKLASVP-SRKAYNAFHSVKEVVGSIARTDIL 246

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I  ++L   +++ R   V+++   G + I   G+AL +   G +I VKNI TG ++
Sbjct: 247 SGKIIRPTMLKPNFLVKRNMPVKVVYNSGPIHIELLGVALDNGVKGHIIRVKNISTGKVL 306

Query: 138 SGSVVDTGTVRVVVK 152
              VV  G V  + +
Sbjct: 307 RCRVVGEGLVEFLSE 321


>gi|113969600|ref|YP_733393.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. MR-4]
 gi|113884284|gb|ABI38336.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. MR-4]
          Length = 235

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV S  +  GE++N S+++   V  +++RG       
Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTN 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +     I  + L     + +   V I +   N  + T G AL D +IGD 
Sbjct: 153 QISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235


>gi|254473303|ref|ZP_05086700.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
           JE062]
 gi|211957419|gb|EEA92622.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
           JE062]
          Length = 124

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +P+++I  G+ + E  L+E      ++   +  + ++DVVGL  RR L P   IP + + 
Sbjct: 1   MPAMMIYPGDKIEEGMLREHGFFKKSVAQLSIVNRMQDVVGLEARRTLFPGKPIPKNAVQ 60

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
            P V+ RG+ V ++  +  + I     A    +IG  I  +N DTG+ V G V + G+
Sbjct: 61  DPVVVKRGSSVLLVFKEEGLEIRAIVEAQESGAIGANIRARNPDTGLSVLGKVQEDGS 118


>gi|114046832|ref|YP_737382.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           sp. MR-7]
 gi|113888274|gb|ABI42325.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella sp. MR-7]
          Length = 235

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +F S+ V  L  +        VV S  +  GE++N S+++   V  +++RG       
Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTN 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            + G+  +R +     I  + L     + +   V I +   N  + T G AL D +IGD 
Sbjct: 153 QISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
           I VKN  +   +   V   G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235


>gi|95929875|ref|ZP_01312616.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
 gi|95134171|gb|EAT15829.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
          Length = 243

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V    VV    +  G +++   +  + +  S IR      +K+VVG +  R +     + 
Sbjct: 117 VKADVVVAQQSLKRGTIISAEDVSLVHLDVSRIREPIF-DLKNVVGKLVARNVRAGQPVE 175

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              +  P ++ +G+ V+++  +  M ++  GIAL D S G+VI V+N  +  +V   VV 
Sbjct: 176 FKSVETPPLVHKGSFVKLVARRSGMMLTAIGIALEDGSKGEVIRVQNNRSKKVVMAQVVG 235

Query: 144 TGTVRV 149
              V V
Sbjct: 236 PDLVEV 241


>gi|315125980|ref|YP_004067983.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
           sp. SM9913]
 gi|315014494|gb|ADT67832.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
           sp. SM9913]
          Length = 253

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 59/132 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
             S   SV  + V     +N G+VLN+  L+   V     R      I  +VG   +R +
Sbjct: 119 RASAKVSVWINLVAAKHTLNRGKVLNKQDLEYKSVDLGKHRHQGETGIDQLVGFTVKREI 178

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               VI    L + Y+I++   + + +T    + +   IAL D  +G+VI VKN+ +  +
Sbjct: 179 DKGTVISNRYLEKQYLINKNEHISLQITTATFSANVKAIALEDGQLGEVINVKNLSSKKV 238

Query: 137 VSGSVVDTGTVR 148
           V G V+  G   
Sbjct: 239 VQGRVIAQGVAE 250


>gi|304310781|ref|YP_003810379.1| Flageller protein FlgA [gamma proteobacterium HdN1]
 gi|301796514|emb|CBL44722.1| Flageller protein FlgA [gamma proteobacterium HdN1]
          Length = 227

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S  + +    +     +AV+  + I+ G++++   ++  +   +     +   I D  G
Sbjct: 90  WSFMMAATLRTY----QNAVIAKIPISRGQIIDTQAVELRETEITPSASGFYTRISDTKG 145

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L+ +R +  + V+  ++L  P VI RG  V I       +I TAG+AL+  +IG+++ VK
Sbjct: 146 LLAKRSIAANQVLTHTMLKNPDVIQRGQAVIIEAGNTQFSIRTAGVALASGAIGEIVRVK 205

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G  V G+++   T+ +
Sbjct: 206 NSTSGRTVEGTIISDNTINI 225


>gi|241763673|ref|ZP_04761723.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           delafieldii 2AN]
 gi|241367148|gb|EER61514.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           delafieldii 2AN]
          Length = 200

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV     +S+++      F    G A V +  + +G  L  +   E +V  +      
Sbjct: 55  LRCVEGATAWSVFLPVTIKAF----GPAWVLNNNVASGVALTAADATEAEVDWAAEAAPV 110

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             +    VG V  R L+    +  S++  P V   GA+VR++       ++++G ALS+ 
Sbjct: 111 LANPDQWVGQVASRQLMAGQAVRQSMVRAPAVFRAGAQVRVVTQGPGYMVTSSGQALSNG 170

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           + G  I ++ +D G  +SG V + GTV V +
Sbjct: 171 ATGQTIRIR-MDNGRTISGIVNEDGTVAVTL 200


>gi|163794153|ref|ZP_02188126.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
 gi|159180767|gb|EDP65286.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
          Length = 324

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 59/114 (51%)

Query: 37  AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
            GEV++E+ ++ ++V +     N    ++D++G   RR +     I L+ +   +VI +G
Sbjct: 203 PGEVISENDIQWLRVESRRASMNSVTRLEDLLGRTPRRPIAAGQPIRLTDVRPNFVIDKG 262

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
             V I+L  G MT++    A    ++GD+I V+N  +  M+   V   GTV + 
Sbjct: 263 DMVTIVLNSGTMTLTARAEATQKGAVGDIIKVRNNHSRRMLEARVTGAGTVSIT 316


>gi|187478181|ref|YP_786205.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           avium 197N]
 gi|115422767|emb|CAJ49295.1| flagella basal body P-ring formation protein [Bordetella avium
           197N]
          Length = 249

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 5/139 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +      +V G   V S  I AG+ +    L   +    N+        + +VG
Sbjct: 113 WTVYVQAS----LNVPGIYYVASRQIPAGQAITSEDLDSREGDLMNLPPGAMTDARSIVG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  R  +     I  S L     ISRG  VRII       +S+ G AL D + G  I V+
Sbjct: 169 MQARHRINIGQPIRGSALRDAASISRGQNVRIIARGNGFVVSSEGQALEDGAPGATIQVR 228

Query: 130 NIDTGVMVSGSVVDTGTVR 148
              +G +VSG +   G V 
Sbjct: 229 -TQSGQVVSGVLQPGGQVE 246


>gi|302037629|ref|YP_003797951.1| putative flagella basal body P-ring formation protein FlgA
           [Candidatus Nitrospira defluvii]
 gi|300605693|emb|CBK42026.1| putative Flagella basal body P-ring formation protein FlgA
           [Candidatus Nitrospira defluvii]
          Length = 265

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            +   + I   VVP   I   E +    +   ++   +++  +  S  +V+G    R L 
Sbjct: 132 ATADVAAIVEVVVPVRSIKVDEEIAADDVTTERIVLYDLKQPFVTSPAEVIGKAAIRPLP 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
           P + I  + + RP+ + +G +V I   QG ++I T G+  S   +G  I V N+D+G  +
Sbjct: 192 PQNAIRTTSVRRPFAVHKGDRVTIEARQGGLSIQTVGVTKSHGELGQTITVSNVDSGKEL 251

Query: 138 SGSVVDTGTVRVV 150
             +VV  G VRV 
Sbjct: 252 RATVVAPGVVRVT 264


>gi|158422257|ref|YP_001523549.1| flagellar basal-body P-ring formation protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329146|dbj|BAF86631.1| flagellar basal-body P-ring formation protein [Azorhizobium
           caulinodans ORS 571]
          Length = 190

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+V I  G+ +++S L +   + S + R   A S + ++G V RR L     IP++   
Sbjct: 67  VPAVAIYPGDTISDSMLVDRAYSVSPSDRVAVATSRQALIGKVARRGLQAGTPIPVNAYA 126

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P V+SRG    ++L +G +TIS   +A+ D S+G ++ +KN+D+G++++G+V   G+VR
Sbjct: 127 DPQVVSRGHLAPVVLQEGGLTISGFAMAMEDGSVGKIVRLKNLDSGLIIAGTVQSDGSVR 186

Query: 149 V 149
           V
Sbjct: 187 V 187


>gi|120554102|ref|YP_958453.1| SAF domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120323951|gb|ABM18266.1| SAF domain [Marinobacter aquaeolei VT8]
          Length = 235

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV +       V G A++ +  +  GE L    +    V  +  R       + V G
Sbjct: 98  WRMYVTTSV----EVHGPALIAARPLARGERLTPDLVTVNSVQINASRRGVLTRKESVSG 153

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           ++ RR +    V+   +L  P  I RG  V I    G+ ++S+ G AL+ A +G+ + V+
Sbjct: 154 MMMRRPVNAGTVMTPDLLEAPNAIERGDHVIITARSGSFSVSSRGKALASAGVGEQVLVE 213

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
           N+ +   V    V  G V + +
Sbjct: 214 NLRSSRTVKARAVGPGRVEIPM 235


>gi|99082799|ref|YP_614953.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria sp.
           TM1040]
 gi|99039079|gb|ABF65691.1| Flagella basal body P-ring formation protein flgA precursor
           [Ruegeria sp. TM1040]
          Length = 138

 Score =  111 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +   +VP   I A EV+    L    V +         S  +++G   R  L     I
Sbjct: 15  SALADILVPVRTIRAKEVITADDLVFKNVESP----GALSSPNEIIGQEARIALYASRPI 70

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               +  P ++ R   V++I   G + I+T G +L   + G++I V N+ +   V+G + 
Sbjct: 71  HAGDIGPPALVDRNDLVKLIFRHGGLEITTEGRSLGRGAKGELIRVMNLSSRTTVTGRIR 130

Query: 143 DTGTVRV 149
             G + V
Sbjct: 131 ADGNIEV 137


>gi|297183132|gb|ADI19275.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
           proteobacterium HF0200_39L23]
          Length = 227

 Score =  111 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 61/123 (49%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             ++    I    ++ E+ + +++     +   Y    +D++G +  R + P+ VI  + 
Sbjct: 104 DVLIAKDTIKEDHIIREADILKVRRNVDRMPSAYVTDEEDILGKIASRAINPNEVIQETN 163

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +    VI  G ++ I+    N+ ++  GI+L   ++GD I V+N+ + ++V  ++ D   
Sbjct: 164 VSAVPVIKSGDRLMIVFETQNLRLTAPGISLQKGALGDRIRVRNLQSKILVYATIEDRNH 223

Query: 147 VRV 149
           V+V
Sbjct: 224 VQV 226


>gi|260772269|ref|ZP_05881185.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           metschnikovii CIP 69.14]
 gi|260611408|gb|EEX36611.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           metschnikovii CIP 69.14]
          Length = 255

 Score =  111 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 20  LFASVIGHAVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           ++  V     VP V     ++ G+ + ++ +    V     R     S   V+G  T+R 
Sbjct: 123 IYVPVRLTMTVPMVTALNALSRGQTITQNDITLSMVDLLRFRRQGFSSQDMVIGAKTKRN 182

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L    VI  + +    V+ R   V I      M I+T G ALSD ++G+ I VKN  +  
Sbjct: 183 LQLGDVINRNDI---CVVCRNESVLIRAISNGMNITTRGTALSDGNLGEQIKVKNDRSNR 239

Query: 136 MVSGSVVDTGTVRV 149
           ++   V   G V V
Sbjct: 240 IIDAQVSGMGEVTV 253


>gi|261253620|ref|ZP_05946193.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           orientalis CIP 102891]
 gi|260937011|gb|EEX93000.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           orientalis CIP 102891]
          Length = 248

 Score =  111 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV           G  V  +  I+ G++++E  +    V     R     SI  V+G
Sbjct: 114 WRVYVPVRLI----RTGPQVTLTSPISRGQLISEYDVTISMVDLQRFRRQGFTSIDAVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L    VI    +    V+ R   V I   +  MTI+T G+AL+D S G+ I VK
Sbjct: 170 AKAKKNLRAGEVIEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     V V+
Sbjct: 227 NSKSNRIIEGRVSGISEVTVI 247


>gi|209964691|ref|YP_002297606.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodospirillum centenum SW]
 gi|209958157|gb|ACI98793.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
          Length = 326

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 65/137 (47%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           V       A  +    + +  + +GEV+ +  +  ++V    +  +    ++++VGL  R
Sbjct: 175 VRQTIGARAQDMVEVPILNRRLGSGEVIGDQDIAWIKVPRERVSADVVTDLENLVGLAAR 234

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           R L  +  +    +  P V++RGA V ++L    MT++  G AL+D  +G+ + + N  +
Sbjct: 235 RTLAANQPVRGRDVRTPVVVARGALVTLLLQTPAMTLTAQGKALADGGLGESVRIVNTTS 294

Query: 134 GVMVSGSVVDTGTVRVV 150
             +V  +V     V V+
Sbjct: 295 NRVVDATVAGPDLVTVL 311


>gi|332533181|ref|ZP_08409050.1| flagellar basal-body P-ring formation protein FlgA
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037463|gb|EGI73917.1| flagellar basal-body P-ring formation protein FlgA
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 235

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV +  +  GEV+ +S L         +R  Y      ++G  ++R +     + L
Sbjct: 112 MAPVVVATANLTRGEVITKSHLSIEMKPTHFVRIQYLDDPTMLIGSRSKRNIRSGMPVLL 171

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + +    ++ +G  V I      + I T GIAL D ++G+ I +KN  +G +++  V   
Sbjct: 172 NQI---CMVCKGDSVNIYANLRGLRIKTTGIALEDGTLGEQIQIKNKKSGKVLNARVDGV 228

Query: 145 GTVRV 149
            +V+V
Sbjct: 229 ESVQV 233


>gi|254508440|ref|ZP_05120560.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 16]
 gi|219548650|gb|EED25655.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus 16]
          Length = 248

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     +  +  G  V  +  ++ G+++  + +    V     R     ++  V+G
Sbjct: 114 WRVYVP----VRLTRTGPQVTLTTPLSRGQIIASTDVTISMVDLQRYRRQGFSTLDAVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T++ L    VI  + +    V+ R   V I   +  M I+T G+AL+D S G+ I VK
Sbjct: 170 AKTKKNLRSGEVIEENDI---CVVCRNETVTIKAVKSGMVITTKGVALTDGSHGEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     V VV
Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247


>gi|28897546|ref|NP_797151.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308094616|ref|ZP_05890645.2| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AN-5034]
 gi|308125762|ref|ZP_05777207.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus K5030]
 gi|308126465|ref|ZP_05910342.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|5361002|gb|AAD42909.1|U12817_3 polar flagellar FlgA homolog [Vibrio parahaemolyticus]
 gi|28805758|dbj|BAC59035.1| polar flagellar FlgA [Vibrio parahaemolyticus RIMD 2210633]
 gi|308090165|gb|EFO39860.1| flagella basal body P-ring formation protein FlgA [Vibrio
           parahaemolyticus AN-5034]
 gi|308106761|gb|EFO44301.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus AQ4037]
 gi|308115098|gb|EFO52638.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus K5030]
          Length = 248

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   S + VVG
Sbjct: 114 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +  MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V D   + V 
Sbjct: 227 NDKSQRIIEGIVTDIAEITVT 247


>gi|262273533|ref|ZP_06051347.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
 gi|262222511|gb|EEY73822.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
          Length = 224

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
              +  G+ +  + +    V  + +R  +    + ++G   RR + P  ++   ++ RP 
Sbjct: 105 KSPLKRGQAIQLTDVATKAVNIAYVRHGFFTDTEPLIGKQVRRNISPGRILTPKLIDRPV 164

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            + R  +V I   +  M     GIAL + S GD+I VKN  +   +   V   GTV  +
Sbjct: 165 WVKRDQEVIIEARRDTMIARMKGIALENGSEGDIIRVKNSTSEKEIRARVSSPGTVSTI 223


>gi|209963566|ref|YP_002296481.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
 gi|209957032|gb|ACI97668.1| flagella basal body P-ring formation protein FlgA, putative
           [Rhodospirillum centenum SW]
          Length = 215

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 55/120 (45%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A VP+  +  GE++    L  + V    +      +  D++G   RR L+P  ++    +
Sbjct: 92  AAVPNRRLTPGEIIQPGDLASLPVRADQVSARAVVAPTDLIGKQVRRALVPGRLVQSGSV 151

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P V+ R   V +    G + ++  G AL    +GDV+ V N+D+   ++G V   G V
Sbjct: 152 GEPVVVERSKPVTLEFRSGALLLTARGRALESGGVGDVVRVINLDSNRTITGVVSGPGVV 211


>gi|118588712|ref|ZP_01546120.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
 gi|118438698|gb|EAV45331.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
          Length = 331

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 60/128 (46%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A+ +   +V    +  G+++ E  L  ++   + +       ++D+VG   R  L  +  
Sbjct: 189 ATEMVDVLVLVQPVRRGDIVREEDLNIIREARTKVPAGALTEVEDIVGKQARTTLRANAP 248

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +  + + RP +I RG K+ +      M +++   A+   + GDVI V N+ +  +V  ++
Sbjct: 249 LSRNDVQRPILIERGEKITVTYVMPGMKLTSRAQAMDSGAKGDVIDVMNLQSRRIVPATI 308

Query: 142 VDTGTVRV 149
              G VRV
Sbjct: 309 TSRGQVRV 316


>gi|77359715|ref|YP_339290.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874626|emb|CAI85847.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Pseudoalteromonas haloplanktis TAC125]
          Length = 235

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++ YV    +  A V    VV +V +  GEV+  + L     +   IR  Y  +   ++G
Sbjct: 101 WAQYVHVRVTETAPV----VVANVNLARGEVITAAHLSIEMRSTHFIRVQYLDNPALLIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             ++R +     + LS +    ++ +G  V I      + + T GIAL D S+G+ + VK
Sbjct: 157 SRSKRNIRSGMPLLLSQI---CMVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVK 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  TG +++  V    +V+V
Sbjct: 214 NKKTGKVLNARVDGVESVQV 233


>gi|119503639|ref|ZP_01625722.1| flagellar protein [marine gamma proteobacterium HTCC2080]
 gi|119460701|gb|EAW41793.1| flagellar protein [marine gamma proteobacterium HTCC2080]
          Length = 234

 Score =  110 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           ++LYV         V  + VVP +   +  G+++  + +   +   +   G     I  +
Sbjct: 98  WTLYV------RGEVAANQVVPVLTAALRRGDLIGNNDIILKKRRITQENGGIVTEIDGL 151

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G+  RR L P + +  + L  P ++ RG  V I+     + +S  G AL+  + GD + 
Sbjct: 152 IGMEARRNLDPGNPLRFNDLVAPILVERGQTVNIVSGGSGLRVSMQGKALAKGAAGDRVL 211

Query: 128 VKNIDTGVMVSGSVVDTGTV 147
           V N+ +G  V G +   G+V
Sbjct: 212 VANLTSGTRVEGIIATDGSV 231


>gi|153839087|ref|ZP_01991754.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149747425|gb|EDM58385.1| flagellar basal body P-ring biosynthesis protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 248

 Score =  110 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   S + VVG
Sbjct: 114 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +  MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V D   + + 
Sbjct: 227 NDKSQRIIEGIVTDIAEITIT 247


>gi|262276423|ref|ZP_06054232.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
 gi|262220231|gb|EEY71547.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
           hollisae CIP 101886]
          Length = 232

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L   V    VV    ++ G  + +  L    V     RG        ++G
Sbjct: 98  WQVYVPVQIRLLTPV----VVAKRPLDRGVTIAKEDLIIQLVDARFQRGQTYTDNATLLG 153

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +RV+     I  + +    ++ R  +V I      + I   G ALSD ++G+ I V+
Sbjct: 154 SRVKRVVGIGEPISGNDI---CMVCRNDEVIITAAGNGLNIIAKGTALSDGALGEQIKVR 210

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +V G++   G V V
Sbjct: 211 NTKSNRIVDGTITAVGQVIV 230


>gi|27363711|ref|NP_759239.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus CMCP6]
 gi|27359827|gb|AAO08766.1| Flagellar basal-body P-ring formation protein flgA [Vibrio
           vulnificus CMCP6]
          Length = 248

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+  S+    V  +  ++ GE+++ S +    +     R      I  VVG
Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +RVL P  V+    +    V+ R  KV I  T+  MTI+T G +L D + G+ + VK
Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     V V
Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246


>gi|37679141|ref|NP_933750.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus YJ016]
 gi|320157115|ref|YP_004189494.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           vulnificus MO6-24/O]
 gi|37197883|dbj|BAC93721.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           vulnificus YJ016]
 gi|319932427|gb|ADV87291.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           vulnificus MO6-24/O]
          Length = 248

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+  S+    V  +  ++ GE+++ S +    +     R      I  VVG
Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +RVL P  V+    +    V+ R  KV I  T+  MTI+T G +L D + G+ + VK
Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     V V
Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246


>gi|90422611|ref|YP_530981.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisB18]
 gi|90104625|gb|ABD86662.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
          Length = 161

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 3/134 (2%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRV 75
            S  A       VP+ VI  G+++ +  + +      N+ G   +      VVG + RR 
Sbjct: 26  ASALAEEPARFPVPATVIYPGDLIKDEMIIDRSF-APNLPGVAAFVGDRPAVVGRIARRT 84

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           LLP  +IP++ L    ++SRG+ V++++  G+++I T G +L   S G +I ++N+DTGV
Sbjct: 85  LLPGQLIPINALEEQKLVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGSMIQLRNLDTGV 144

Query: 136 MVSGSVVDTGTVRV 149
            + G V   G+VR+
Sbjct: 145 TIRGIVQPDGSVRI 158


>gi|296135677|ref|YP_003642919.1| flagella basal body P-ring formation protein FlgA [Thiomonas
           intermedia K12]
 gi|295795799|gb|ADG30589.1| flagella basal body P-ring formation protein FlgA [Thiomonas
           intermedia K12]
          Length = 242

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +SLY+              VV +  + AG VL  + L  ++   + +        + +V
Sbjct: 103 VWSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTTVERDAARLPPGAVTDAQALV 158

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V R  +     +  S+L  P ++  G  V +I     + +   G A++D  +G  + V
Sbjct: 159 GQVLRYSVAAGQPLVQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLV 218

Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152
           +N+ +G +VSG V   G V V ++
Sbjct: 219 RNVQSGRVVSGIVDTQGQVVVPLQ 242


>gi|238927616|ref|ZP_04659376.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
 gi|238884541|gb|EEQ48179.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
          Length = 254

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 6/153 (3%)

Query: 5   RFLLFFSLYVLSLDSLFAS------VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
            F +  ++YV  +    AS      V    +V    I   E +  +     + +   +  
Sbjct: 102 EFPVLCAVYVDGVLQRRASCYYQVTVYDRVLVAMTDIRMDEAITPANAHIEESSVDTLPE 161

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
                   + G V  R +    VI   +L  P V+S G+ V ++   G +TI   G+AL 
Sbjct: 162 TTVTDFSRLAGRVAGRYIRKGMVIAPPLLAMPRVVSAGSPVELVAESGGITIRAEGVALE 221

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
              IG VI V+N  +G ++ G V+D  TV+++ 
Sbjct: 222 AGRIGYVIRVRNASSGKLMRGRVIDEKTVQIIA 254


>gi|39998141|ref|NP_954092.1| flagella basal body P-ring formation protein flgA [Geobacter
           sulfurreducens PCA]
 gi|39985087|gb|AAR36442.1| flagella basal body P-ring formation protein flgA, putative
           [Geobacter sulfurreducens PCA]
 gi|298507078|gb|ADI85801.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           sulfurreducens KN400]
          Length = 248

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 62/132 (46%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++    +  AVV +  +  G+++    +   +   S++ G    SI +VVG   +  + 
Sbjct: 115 VTVDVEALADAVVAAHPLARGDIITSDDVTVQKRDISSVNGRVYRSIDEVVGKRVKNAVR 174

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +  + + +  ++  G  V II     + ++  G A  + + GD+I V+N+ +   +
Sbjct: 175 ANTPLSGASIEKVPLVKSGQLVTIIAESPALRLTATGKARGNGAEGDIIKVQNMGSLKEI 234

Query: 138 SGSVVDTGTVRV 149
              V+D GTV+V
Sbjct: 235 PARVIDVGTVQV 246


>gi|294339847|emb|CAZ88210.1| putative Flagella basal body P-ring formation protein flgA
           [Thiomonas sp. 3As]
          Length = 244

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +SLY+              VV +  + AG VL  + L  ++   + +        + +V
Sbjct: 105 VWSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTMVERDATRLPPGAVTDAQALV 160

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V R  +     +  S+L  P ++  G  V +I     + +   G A++D  +G  + V
Sbjct: 161 GQVLRYSVAAGQPLAQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLV 220

Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152
           +N+ +G +VSG V   G V V ++
Sbjct: 221 RNVQSGRVVSGIVDAQGQVVVPLQ 244


>gi|119469944|ref|ZP_01612749.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Alteromonadales bacterium TW-7]
 gi|119446654|gb|EAW27927.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Alteromonadales bacterium TW-7]
          Length = 235

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV +  I  GEV+  + +         +R  Y    K ++G  ++R +     I L
Sbjct: 112 MAPVVVTTDNIARGEVITSAHITVEMKPTHFVRVQYQDDPKALIGSRSKRNIREGMPILL 171

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + +    ++ +G  + I  +   + I T G+AL D ++G+ I V+N  TG +++  V   
Sbjct: 172 NQI---CMVCKGDAINIYASTKGLQIKTTGVALEDGTLGEQILVENKKTGKVLNARVDGV 228

Query: 145 GTVRV 149
            +V+V
Sbjct: 229 ESVQV 233


>gi|114570498|ref|YP_757178.1| flagellar basal body P-ring biosynthesis protein FlgA [Maricaulis
           maris MCS10]
 gi|114340960|gb|ABI66240.1| flagellar protein FlgA [Maricaulis maris MCS10]
          Length = 314

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
               +  A       V +  + +G+ +  S +  +   +  +R +     + ++G+ TRR
Sbjct: 172 PVRVTGRAYATVELPVLARPVASGQEITASDITWISHRSDRLRPDAILDPEALIGMETRR 231

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L P+  +    L RP ++ RG  V ++     + ++    A+ DA+ G+V    N+ + 
Sbjct: 232 ALRPNEPLRGYDLQRPLMVERGDLVVLMFEVPGIQLTVRARAMEDAADGEVARFINLQSN 291

Query: 135 VMVSGSVVDTGTVRV 149
             V   V   G  RV
Sbjct: 292 RTVEALVDGPGRARV 306


>gi|294853177|ref|ZP_06793849.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294818832|gb|EFG35832.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 163

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 52/87 (59%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S+   VG V R+ LLP   I +S L  P +++RG    ++ T G +TI+  G  L     
Sbjct: 3   SLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVA 62

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           GD I V+N+D+G++VSG+V+  G ++V
Sbjct: 63  GDFIKVRNVDSGIIVSGTVLANGRIQV 89


>gi|288574698|ref|ZP_06393055.1| flagella basal body P-ring formation protein FlgA
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570439|gb|EFC91996.1| flagella basal body P-ring formation protein FlgA
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 304

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            AVV    +  G  +  + L    +     R  Y    KD+VG+   R +       + +
Sbjct: 181 PAVVADSYLRKGVYIKNTDLAIAAIEVRRNRK-YYDDPKDLVGMTVERDMAKGDPFTVRI 239

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
              P +I  G  +R++   G++ +ST+G A+   ++GD I V+N  T  +V G V   GT
Sbjct: 240 TEEPELIRTGDLIRLLYRSGSLLVSTSGRAMDRGALGDRIKVRNDRTRKIVFGIVTGPGT 299

Query: 147 VRV 149
           V V
Sbjct: 300 VEV 302


>gi|297580849|ref|ZP_06942774.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534675|gb|EFH73511.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 255

 Score =  109 bits (274), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + ++V+G
Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254


>gi|255609741|ref|XP_002539089.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
 gi|223508772|gb|EEF23295.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
          Length = 163

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    +S+YV  +      V G+AVV +  I  G+ + +  L+      +        + 
Sbjct: 22  RAPSSWSIYVPVMI----RVSGNAVVATHPIARGQAITQDDLELQTRDLTQYPNGTFSNP 77

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + ++G      +    V+    L    VI +G +V ++       +S+ G A+ +A+ G 
Sbjct: 78  EQIIGRTATLNIPAGEVLRPEQLKAALVIRQGQQVTLVAQGAGFKVSSEGTAMGNAATGQ 137

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+AVK   +G ++ G     G V V
Sbjct: 138 VVAVK-TRSGQIIKGIAKGDGVVEV 161


>gi|259417444|ref|ZP_05741363.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
           TrichCH4B]
 gi|259346350|gb|EEW58164.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
           TrichCH4B]
          Length = 138

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +   +VP   I A E++    L    V           S  +++G   R  L     I
Sbjct: 15  SALADILVPVRTIRAKEIIAAEDLVFKNVEAP----GALSSPNEIIGQEARVALYASRPI 70

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               +  P ++ R   V++I   G + IST G +L   + G++I V N+ +   V+G + 
Sbjct: 71  HAGDIGPPALVDRNDLVKLIFRHGGLEISTEGRSLGRGAEGELIRVMNLSSRTTVTGRIR 130

Query: 143 DTGTVRV 149
             G + V
Sbjct: 131 ADGNIEV 137


>gi|304438316|ref|ZP_07398257.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
 gi|304368682|gb|EFM22366.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
          Length = 254

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 6/153 (3%)

Query: 5   RFLLFFSLYVLSLDSLFAS------VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
            F    ++YV  +    A+      V  H +V    I   E +  +     +     +  
Sbjct: 102 EFPAAITVYVDGVLQRRAACYYQVTVYDHVLVAMTDIRMDEAITPANAHVEESAVDTLPE 161

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
                   + G V  R +    VI  ++L  P V++ G+ V ++   G +TI   G+AL 
Sbjct: 162 TTVTDFDRLAGRVAGRYIRKGTVITPTLLAMPRVLTAGSPVTLVAENGGITIRAEGVALE 221

Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
              IG VI V+N  +G ++ G VVD  TV+++ 
Sbjct: 222 AGRIGYVIRVRNARSGKIMRGRVVDEKTVQIIA 254


>gi|157959906|ref|YP_001499940.1| SAF domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157844906|gb|ABV85405.1| SAF domain protein [Shewanella pealeana ATCC 700345]
          Length = 254

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV +   + A V     V + ++  GE ++ + ++  +V       N    +  +VG
Sbjct: 117 WSLYVRATVEVRAKVP----VANRLLRRGEHISLADIEWQEVNLDASDRNLVGQLDQIVG 172

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L     I    L  P  ++ G +V I         +  G AL     G  I V+
Sbjct: 173 RQVVRKLRRHQAIKSQQLDDPQWVNIGDRVIIEARSNGFYANMPGEALEGGGQGQAIRVR 232

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +G ++S   +  G V
Sbjct: 233 NLSSGKVISAYPIAKGRV 250


>gi|90418391|ref|ZP_01226303.1| putative flagellar basal body P-ring formation protein
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90338063|gb|EAS51714.1| putative flagellar basal body P-ring formation protein
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 165

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP+ VI  G+ +    L        + + G YA     +VG V RR LLP   I LS L 
Sbjct: 43  VPTTVIYPGQSVTGPGLHHKAFYVKDDKIGLYAVDDSALVGRVARRTLLPGKAIRLSDLK 102

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++  GA V ++ ++  + I+  G AL  A  G+ + V+N D+G++VSG V   G++R
Sbjct: 103 EPDLVRAGAAVTLVYSEAGLVITGQGTALRSAGAGETVRVRNADSGIIVSGIVSADGSIR 162

Query: 149 V 149
           +
Sbjct: 163 I 163


>gi|222053733|ref|YP_002536095.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           FRC-32]
 gi|221563022|gb|ACM18994.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           FRC-32]
          Length = 226

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 61/134 (45%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
               +    +   VV    +  GEV++ + +   +   S ++G +   + +VVG   R  
Sbjct: 91  VPVKVEVEAMAEMVVAVRPLERGEVIDAADVAVQKRGLSRLQGRFVRDVDEVVGKRVRTA 150

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +  ++ I    L R  +I  G  V I+    ++ I+ AG A +  + GD + V+N+ +  
Sbjct: 151 IRGNNPIRPDFLERVPLIKSGQLVTIVAENESLRITAAGKARNSGAEGDTVMVRNLASQK 210

Query: 136 MVSGSVVDTGTVRV 149
            +   V+D  TV+V
Sbjct: 211 ELPARVIDAETVKV 224


>gi|15642202|ref|NP_231834.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121586266|ref|ZP_01676056.1| flagellar protein, putative [Vibrio cholerae 2740-80]
 gi|121726549|ref|ZP_01679798.1| flagellar protein, putative [Vibrio cholerae V52]
 gi|147674697|ref|YP_001217720.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae O395]
 gi|153817121|ref|ZP_01969788.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
 gi|153820832|ref|ZP_01973499.1| flagellar protein, putative [Vibrio cholerae B33]
 gi|153825364|ref|ZP_01978031.1| flagellar protein, putative [Vibrio cholerae MZO-2]
 gi|153829335|ref|ZP_01982002.1| putative flagellar protein [Vibrio cholerae 623-39]
 gi|183179559|ref|ZP_02957770.1| flagellar protein, putative [Vibrio cholerae MZO-3]
 gi|227082327|ref|YP_002810878.1| flagellar protein, putative [Vibrio cholerae M66-2]
 gi|229507720|ref|ZP_04397225.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           BX 330286]
 gi|229512085|ref|ZP_04401564.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           B33]
 gi|229513847|ref|ZP_04403309.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TMA 21]
 gi|229519220|ref|ZP_04408663.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC9]
 gi|229528792|ref|ZP_04418182.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           12129(1)]
 gi|229607224|ref|YP_002877872.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MJ-1236]
 gi|254225797|ref|ZP_04919402.1| flagellar protein, putative [Vibrio cholerae V51]
 gi|254286488|ref|ZP_04961445.1| flagellar protein, putative [Vibrio cholerae AM-19226]
 gi|254849332|ref|ZP_05238682.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MO10]
 gi|298500419|ref|ZP_07010224.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MAK 757]
 gi|9656759|gb|AAF95348.1| flagellar protein, putative [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549532|gb|EAX59558.1| flagellar protein, putative [Vibrio cholerae 2740-80]
 gi|121631002|gb|EAX63381.1| flagellar protein, putative [Vibrio cholerae V52]
 gi|125621703|gb|EAZ50032.1| flagellar protein, putative [Vibrio cholerae V51]
 gi|126512389|gb|EAZ74983.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
 gi|126521624|gb|EAZ78847.1| flagellar protein, putative [Vibrio cholerae B33]
 gi|146316580|gb|ABQ21119.1| putative flagellar protein [Vibrio cholerae O395]
 gi|148875176|gb|EDL73311.1| putative flagellar protein [Vibrio cholerae 623-39]
 gi|149741048|gb|EDM55117.1| flagellar protein, putative [Vibrio cholerae MZO-2]
 gi|150423437|gb|EDN15381.1| flagellar protein, putative [Vibrio cholerae AM-19226]
 gi|183012970|gb|EDT88270.1| flagellar protein, putative [Vibrio cholerae MZO-3]
 gi|227010215|gb|ACP06427.1| flagellar protein, putative [Vibrio cholerae M66-2]
 gi|227014099|gb|ACP10309.1| flagellar protein, putative [Vibrio cholerae O395]
 gi|229332566|gb|EEN98052.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           12129(1)]
 gi|229343909|gb|EEO08884.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC9]
 gi|229349028|gb|EEO13985.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TMA 21]
 gi|229352050|gb|EEO16991.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           B33]
 gi|229355225|gb|EEO20146.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           BX 330286]
 gi|229369879|gb|ACQ60302.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           MJ-1236]
 gi|254845037|gb|EET23451.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MO10]
 gi|297541112|gb|EFH77166.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           cholerae MAK 757]
          Length = 255

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + ++V+G
Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254


>gi|229522152|ref|ZP_04411569.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TM 11079-80]
 gi|229524198|ref|ZP_04413603.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           bv. albensis VL426]
 gi|229337779|gb|EEO02796.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           bv. albensis VL426]
 gi|229341077|gb|EEO06082.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           TM 11079-80]
          Length = 255

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + ++V+G
Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254


>gi|308095530|ref|ZP_05906616.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus Peru-466]
 gi|308086102|gb|EFO35797.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus Peru-466]
          Length = 216

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   S + VVG
Sbjct: 82  WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 137

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +  MTI+T G AL D + GD + VK
Sbjct: 138 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 194

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V D   + V 
Sbjct: 195 NDKSQRIIEGIVTDIAEITVT 215


>gi|126176160|ref|YP_001052309.1| SAF domain-containing protein [Shewanella baltica OS155]
 gi|125999365|gb|ABN63440.1| SAF domain [Shewanella baltica OS155]
          Length = 245

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV +  +L A +     V +  +   E++    L+   +  +    +     K ++G
Sbjct: 108 WSLYVRAKVALSAYIP----VANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +  +  I  S L+ P ++S G +V I            GIA+    +GD I V+
Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVR 223

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +++   +  G V  
Sbjct: 224 NSSSGRIITAYPIAKGRVET 243


>gi|153213632|ref|ZP_01948905.1| flagellar protein, putative [Vibrio cholerae 1587]
 gi|124115831|gb|EAY34651.1| flagellar protein, putative [Vibrio cholerae 1587]
          Length = 255

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + ++V+G
Sbjct: 121 WRIYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254


>gi|212637781|ref|YP_002314306.1| flageller protein FlgA [Shewanella piezotolerans WP3]
 gi|212559265|gb|ACJ31719.1| Flageller protein FlgA [Shewanella piezotolerans WP3]
          Length = 248

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 4/138 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LYV +       V     V + ++  GE ++ + ++  QV  S    +    ++ ++G
Sbjct: 111 WNLYVRASV----QVSARLPVANRILKRGEHISAADIEWQQVKLSVSDRDLVTELEQIIG 166

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L    VI    L +P  ++ G KV I         + +G AL     G  I V+
Sbjct: 167 QQVVRKLRRHRVIKAQQLGKPQWVNIGDKVIIEARSNGFYANMSGEALEAGGEGKAIRVR 226

Query: 130 NIDTGVMVSGSVVDTGTV 147
           N+ +G ++S   +  G V
Sbjct: 227 NLSSGKIISAYPIAKGRV 244


>gi|88858149|ref|ZP_01132791.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Pseudoalteromonas tunicata D2]
 gi|88819766|gb|EAR29579.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
           P-ring [Pseudoalteromonas tunicata D2]
          Length = 235

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           +D +++L +  +    L  +        V+    I  G+++    +         +R   
Sbjct: 96  LDEIKWLQYVQVRTTELAEI--------VITQNPIAKGQLITAQDIVTEMRPTHLVRNQN 147

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              IK ++G    R +   + I L+ +    +I +G KV I   Q N+ I T G AL + 
Sbjct: 148 IDDIKMLIGSRATRSIRAGNPINLNQI---CMICKGDKVTIYAKQPNLVIKTNGEALENG 204

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +G+ I+V+N  +G  +   V++T  V V
Sbjct: 205 LLGENISVQNSKSGKKIQAQVMNTNDVIV 233


>gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria
           pomeroyi DSS-3]
 gi|56676836|gb|AAV93502.1| flagellar basal-body P-ring formation protein FlgA [Ruegeria
           pomeroyi DSS-3]
          Length = 138

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           L  +     +VP+  I A E++    L                   +V+G   R  L   
Sbjct: 12  LAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEVP----GSFTDPAEVIGQEARVALYAG 67

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  + +  P ++ R   V +    G + I+T G AL   + GDVI V N+ +   VSG
Sbjct: 68  RPIRYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSG 127

Query: 140 SVVDTGTVRV 149
            +   G++ V
Sbjct: 128 QIRPNGSIEV 137


>gi|54308091|ref|YP_129111.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Photobacterium profundum SS9]
 gi|46912517|emb|CAG19309.1| putative FlgA [Photobacterium profundum SS9]
          Length = 235

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L        VV +  +  G VLN S L    V +   RG       +++G
Sbjct: 101 WQVYVPVRVQLLLP----RVVAATPLARGLVLNASHLSVKLVESRFQRGIVFEQPAEIIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R   V I    G + I T G ALSD ++G+ I V+
Sbjct: 157 SKVKRTVNIGEAVQGNDI---CLVCRNDAVMIKAGNGGLNIITNGTALSDGALGEQIRVQ 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V   G V V
Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233


>gi|163802609|ref|ZP_02196501.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
 gi|159173692|gb|EDP58511.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
          Length = 216

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   + + VVG
Sbjct: 82  WKVYVPVRISASVPMI----VSTRQLGRGEIISTSDVTTSMIELQRFRKDGFTTYEQVVG 137

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +G MTI+T G AL D + GD + VK
Sbjct: 138 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGATGDQVRVK 194

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V +   + + 
Sbjct: 195 NDKSQRIIEGIVTNIAEITIT 215


>gi|90410999|ref|ZP_01219013.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           profundum 3TCK]
 gi|90328212|gb|EAS44523.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           profundum 3TCK]
          Length = 235

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L        VV +  +  G VLN S L    V +   RG       +++G
Sbjct: 101 WQVYVPVRIQLLLP----RVVAATPLARGLVLNASHLSVKLVESRFQRGIVFEHPTEIIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R   V I    G + + T G ALSD ++G+ I V+
Sbjct: 157 SKVKRTIKMGEAVQGNDI---CLVCRNDAVIIKAGNGGLNVITNGTALSDGALGEQIRVQ 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V   G V V
Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233


>gi|325982376|ref|YP_004294778.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
           AL212]
 gi|325531895|gb|ADZ26616.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
           AL212]
          Length = 249

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +  +    V+ + +  +  I  G+++    +       + +          +VG
Sbjct: 113 WTIYVQAEIN----VMSNVLHTARPIATGQIITNEDIAPQNTNLTQLPEGILTDASLIVG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    L     +   +L  PYVI RG  V +++      I + G AL+DA+ G VI V+
Sbjct: 169 KVAATNLPAGQPLRPQMLRAPYVILRGQTVSLVVQGRGFNIQSEGQALADAADGQVIQVR 228

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +VSG       V +
Sbjct: 229 N-KSGRIVSGLARPNSIVEI 247


>gi|308050028|ref|YP_003913594.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
 gi|307632218|gb|ADN76520.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
           balearica DSM 9799]
          Length = 252

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +  Y+ +  S  A +     V    +  G  +  S L   +        ++  +   +VG
Sbjct: 115 WRYYIRARVSAVAELP----VARHRLGRGHTIQASDLTLAKRELGVTSQDWVFARDALVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR +  D  I  S +  P  +S G +V I    G  +    G+AL   S G  + V+
Sbjct: 171 QSVRRAIRADKPIRHSQVTAPNWVSLGQEVLIEAAGGGFSAVMKGVALDAGSEGQPVRVR 230

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +G +++   V  G V+ 
Sbjct: 231 NLSSGQVITAYPVAPGKVQT 250


>gi|218708798|ref|YP_002416419.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           splendidus LGP32]
 gi|218321817|emb|CAV17785.1| Flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           splendidus LGP32]
          Length = 248

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +    V  +  +  GE++ +  +    ++ +  R     + + V+G
Sbjct: 114 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L P  V+    +    V+ R  KV I   +G MTI+T G AL+D S+GD + VK
Sbjct: 170 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     V V
Sbjct: 227 NDKSQRIIEGIVTSMSEVTV 246


>gi|260767919|ref|ZP_05876853.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260615949|gb|EEX41134.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
          Length = 233

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ AS+    VV    +  G  L  S L     T +  + ++   I +  GL   R L 
Sbjct: 101 VTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDFFTRIDEASGLEVNRRLR 159

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              ++  +++ +P ++ +G +V II  +  +  ST G+AL D   GD I V+N  +  +V
Sbjct: 160 AGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRGDQIEVQNSASQSVV 219

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 220 HAVVTGLNQVHT 231


>gi|323498426|ref|ZP_08103422.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           sinaloensis DSM 21326]
 gi|323316499|gb|EGA69514.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           sinaloensis DSM 21326]
          Length = 248

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     +  +  G  V     ++ G++++   +    V     R     +I  V+G
Sbjct: 114 WRVYVP----VRLTRTGPQVTLIAPLSRGQIISARDVTISMVDLQRYRRQGFSTIDAVIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T++ L    +I  + +    V+ R   V I   +  M I+T G+A++D S G+ I VK
Sbjct: 170 AKTKKNLRSGEIIEENDI---CVVCRNETVTIKAVKSGMVITTKGVAMTDGSHGEQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V     V VV
Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247


>gi|21113068|gb|AAM41243.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573877|gb|AAY49287.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 281

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I +GE ++ + +   +   + I G         VG   RR+L
Sbjct: 147 FVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVLADPATAVGKTARRIL 206

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L  P ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 207 PAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 266

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 267 VQGIVEASGTVVV 279


>gi|288962679|ref|YP_003452973.1| FlgA protein [Azospirillum sp. B510]
 gi|288914945|dbj|BAI76429.1| FlgA protein [Azospirillum sp. B510]
          Length = 246

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 59/128 (46%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A V     VP   I  GEV+  + L  +++        +  S + +VG   RR +    +
Sbjct: 108 AEVEVTMPVPVRRIRPGEVIEAADLTTIRLPLERAGAGFITSAEALVGQSPRRQISAGRM 167

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           + +  +  P V+ R   V ++   G + ++  G AL +  +GD + V NI +  +V+G+V
Sbjct: 168 VQVGSVGAPIVVQRNRPVTLVYEDGALMLAARGRALQEGGVGDTVRVMNIASSTIVTGTV 227

Query: 142 VDTGTVRV 149
               TV V
Sbjct: 228 TGAETVSV 235


>gi|91204382|emb|CAJ70882.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 339

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VV +  IN  ++L    +   ++  +++ G     S++ ++G      + P   +  +++
Sbjct: 216 VVANRKINRNDILTTKDICIKRIETTSMPGFTTIDSVEPLLGKRVLYTIPPGKPLTQNMV 275

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P VI +G  V+I++  GN++I T G+A  D   G  I V N+DT   + G V D  TV
Sbjct: 276 DDPAVIKKGELVKILVKIGNLSILTKGVAKEDGYKGRAIKVMNLDTKKELYGEVQDDCTV 335

Query: 148 RVVV 151
           ++++
Sbjct: 336 KIIL 339


>gi|218778845|ref|YP_002430163.1| flagella basal body P-ring formation protein FlgA
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760229|gb|ACL02695.1| Flagella basal body P-ring formation protein FlgA
           [Desulfatibacillum alkenivorans AK-01]
          Length = 324

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 53/124 (42%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
              VV +  ++  +VL    +       S +        K+V G+  R+ +     +   
Sbjct: 199 APVVVATRKLDRMDVLTAGDVTVEMRNLSRLPDGVVTDPKEVRGMRLRQDMDAGEHMLSR 258

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           +L +P ++ RG  V I+   G ++I+  G+A     +GD I V+N  +  +++  V    
Sbjct: 259 MLEKPPLVERGEDVTIMAENGVLSITAIGLAKESGGLGDAIEVENKMSEKIITCRVTGPA 318

Query: 146 TVRV 149
            V V
Sbjct: 319 QVEV 322


>gi|304412512|ref|ZP_07394118.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|307307171|ref|ZP_07586909.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
 gi|304349154|gb|EFM13566.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica OS183]
 gi|306910410|gb|EFN40841.1| flagella basal body P-ring formation protein FlgA [Shewanella
           baltica BA175]
          Length = 245

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV +  +L A +     V +  +   E++    L+   +  +    +     K ++G
Sbjct: 108 WSLYVRAKVALSAYIP----VANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +  +  I  S L+ P ++S G +V I            GIA+     GD I V+
Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKQGDAIRVR 223

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +++   +  G V  
Sbjct: 224 NSSSGRIITAYPIAKGRVET 243


>gi|114777906|ref|ZP_01452820.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
 gi|114551693|gb|EAU54245.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
          Length = 234

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 60/127 (47%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  A+V    I+A  +L    +   +   +   G +  +   +VG+ T R L    VI  
Sbjct: 103 MATAIVMRQNISARSLLTRDMMTNRRTDIAGHHGAWWQNSSTLVGMRTTRPLAAGDVILS 162

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S + +P ++ RG  V I+L  G + I   G A+  A  G+ I V+N+ +  M+   V  T
Sbjct: 163 SYVKQPPLVKRGDLVSILLDVGGLHIRAEGKAMRSAGKGESIPVRNMRSHEMIQAVVEQT 222

Query: 145 GTVRVVV 151
           G VRV +
Sbjct: 223 GLVRVSL 229


>gi|330826751|ref|YP_004390054.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans K601]
 gi|329312123|gb|AEB86538.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans K601]
          Length = 248

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 5/151 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+     +++++      F    G A V +  + +GEVL+E+   E +V  +      
Sbjct: 103 LRCMDGPTRWNVFLPITVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + +  VGL+  R L     +  +++  P +   G+ VR+++      ++++G A+S  
Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           + G  + V+ +  G +V+G V++ GTV   +
Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVEAAL 248


>gi|149912835|ref|ZP_01901369.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. AzwK-3b]
 gi|149813241|gb|EDM73067.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. AzwK-3b]
          Length = 139

 Score =  107 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 4/136 (2%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
           L L      V    +V +  I   E++    +              A+ +  V+G   R 
Sbjct: 7   LILLLAAGPVSADMIVAARTIRPQEIITLGDVGFQAGEI----AGIANRLDQVIGQEARV 62

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L     I L+ +  P V+ R   V +I     + I+T G AL  A +G++I V N+ + 
Sbjct: 63  ALYAGRPIRLTDIGEPAVVDRNQMVSLIFESHGLRIATEGRALDRAGVGEMIRVMNMSSR 122

Query: 135 VMVSGSVVDTGTVRVV 150
             VSG V+  G +RV+
Sbjct: 123 ATVSGEVLPDGRIRVM 138


>gi|21108208|gb|AAM36850.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 312

 Score =  107 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 178 FVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 237

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +   G ALSDA   + ++V+N  +  +
Sbjct: 238 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVSVENSSSRRV 297

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 298 VQGIVEASGTVVV 310


>gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus
           denitrificans BC]
 gi|317119096|gb|ADV01585.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
           denitrificans BC]
          Length = 248

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 5/151 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+     +++++      F    G A V +  + +GEVL+E+   E +V  +      
Sbjct: 103 LRCMDGPTRWNVFLPISVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + +  VGL+  R L     +  +++  P +   G+ VR+++      ++++G A+S  
Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           + G  + V+ +  G +V+G V++ GTV   +
Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVEAAL 248


>gi|270262405|ref|ZP_06190676.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
 gi|270043089|gb|EFA16182.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
          Length = 217

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            VIG+ +V +  I+AG  L  + +K        +      +    +G V+ R + P   +
Sbjct: 90  QVIGNYLVSARNISAGSRLTAADVKLKSGRLDTLAPRTLTNADKAIGAVSLRNISPGQPL 149

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G  V++        IS AG A+++A+  D + V+ + +G +VSG   
Sbjct: 150 TFAMLRRAWVIKAGQPVQVTAQGTGFNISGAGKAMNNAAAEDSVRVR-MASGQIVSGIAD 208

Query: 143 DTGTVRVVV 151
           D GT+R+ +
Sbjct: 209 DDGTIRIAL 217


>gi|269103194|ref|ZP_06155891.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163092|gb|EEZ41588.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 231

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L        VV SV +  G VL+++ L    + +   RG    S + + G
Sbjct: 97  WQVYVPVRVQLLLP----RVVASVPLGRGMVLSQNNLTVALIESRFQRGAIYQSPQALFG 152

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R  KV I   Q  + I T G ALSD ++G+ I VK
Sbjct: 153 AKVKRNVKIGEAVQANDI---CMVCRNDKVVISAGQPGLKIITQGTALSDGTLGEQIRVK 209

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++S  V   G V V
Sbjct: 210 NNRSNKIISAQVSAVGEVDV 229


>gi|225850284|ref|YP_002730518.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
 gi|225645553|gb|ACO03739.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
          Length = 312

 Score =  107 bits (267), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
             S+    +   +     I  GE++ E  ++ ++ T+ N+R  +   IKD+VG   +  +
Sbjct: 176 RISVKYRKLRRVIAAKRYIKKGEIITEEDIRFIK-TDKNVRKPF-TDIKDIVGSTAKIDI 233

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
             + VI   ++   Y + R   V++I ++ ++ I   G+AL +  +GD+I VKNI +G +
Sbjct: 234 SENDVITERMVIPDYKVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKV 293

Query: 137 VSGSVVDTGTV 147
           +   V+   TV
Sbjct: 294 LICKVIGKDTV 304


>gi|285018214|ref|YP_003375925.1| flagellar basal body p-ring biosynthesis protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473432|emb|CBA15937.1| probable flagellar basal body p-ring biosynthesis protein
           [Xanthomonas albilineans]
          Length = 255

 Score =  106 bits (266), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 60/134 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +    +   +V +  + AGE +  + +   +   + I G         VG + RR L
Sbjct: 121 FVPVKVRRMQQVLVLARGLTAGETIGAADIVPEKRDAARIVGAVMTDPAVAVGKLVRRTL 180

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++ L  L  P ++ RG  V ++  +G + +  AG A+SDA   + + V+N+ +  +
Sbjct: 181 PAGTLLSLGDLVSPRLVRRGDNVALVARKGGLEVRMAGRAMSDAGENERVTVENLSSRRI 240

Query: 137 VSGSVVDTGTVRVV 150
           V G+V   G V V 
Sbjct: 241 VQGTVSQNGDVLVT 254


>gi|114320051|ref|YP_741734.1| flageller protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226445|gb|ABI56244.1| flagellar protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
          Length = 238

 Score =  106 bits (266), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +       V    +V +  +  GE L    +   +   +++   Y    + ++G
Sbjct: 101 WTVYVSARVDTQVEV----LVAARPLRRGERLRADSVTTERRQLASLHRPYETEAEHLIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              RR L    +I  + L  P ++ RG  V +    G + ++  G AL    +GD++ V+
Sbjct: 157 KELRRSLRRGDLIAGNALAAPQLVQRGRSVTLRAGGGRVQVTGQGKALESGVLGDIVRVE 216

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
              +G +V G V     V V
Sbjct: 217 AGSSGRVVEGRVAGESLVEV 236


>gi|148976388|ref|ZP_01813094.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
           bacterium SWAT-3]
 gi|145964211|gb|EDK29467.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
           bacterium SWAT-3]
          Length = 234

 Score =  106 bits (266), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +    V  +  +  GE++ +  +    ++ +  R     + + V+G
Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRALARGEIIGQYDVTTAMISLNKFRRQGFTAPEQVIG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L P  V+    +    V+ R  KV I   +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V +   V V
Sbjct: 213 NDKSQRIIEGIVTNMSEVTV 232


>gi|86146161|ref|ZP_01064487.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
           MED222]
 gi|85836108|gb|EAQ54240.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
           MED222]
          Length = 234

 Score =  106 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +    V  +  +  GE++ +  +    ++ +  R     + + V+G
Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L P  V+    +    V+ R  KV I   +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     V V
Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232


>gi|315179622|gb|ADT86536.1| Flagellar basal body P-ring biosynthesis protein [Vibrio furnissii
           NCTC 11218]
          Length = 233

 Score =  106 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ AS+    VV    +  G  L  S L     T +  + ++   I +  GL   R L 
Sbjct: 101 VTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDFFTRIDEASGLEVNRRLR 159

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              ++  +++ +P ++ +G +V II  +  +  ST G+AL D   G+ I V+N  +  +V
Sbjct: 160 AGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRGEQIEVQNSASQSVV 219

Query: 138 SGSVVDTGTVRV 149
              V     V  
Sbjct: 220 HAVVTGLNQVHT 231


>gi|146278640|ref|YP_001168799.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556881|gb|ABP71494.1| SAF domain [Rhodobacter sphaeroides ATCC 17025]
          Length = 139

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 4/137 (2%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +VL L  L +      VV +  I A EVL    L     T               +GL  
Sbjct: 3   WVLLLLCLASPAPADTVVATRTIRALEVLGPGDLALRPETLP----GTLTEPAQAIGLEA 58

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           R  L     + +  +  P +++R   V +  + G + I   G AL+   +GDVI V N+ 
Sbjct: 59  RVTLYAGRPVGIGDVGPPGIVNRNQIVPLAYSLGALEIRAEGRALARGGVGDVIRVMNLS 118

Query: 133 TGVMVSGSVVDTGTVRV 149
           +   VSG + D G+V V
Sbjct: 119 SRSTVSGRIADDGSVHV 135


>gi|91794999|ref|YP_564650.1| flageller protein FlgA [Shewanella denitrificans OS217]
 gi|91717001|gb|ABE56927.1| Flageller protein FlgA [Shewanella denitrificans OS217]
          Length = 222

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV ++ +    V     V +  +   E ++ + L    +T      +      D+VG
Sbjct: 85  WSLYVRAIVT----VTARLPVVNRTLMRSETVSATDLNWRTLTLKPADKDILSREVDIVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R L  + +I  S L  P ++  G  V I            G+A+     G+ I VK
Sbjct: 141 QQVVRKLRKNSIIKASYLDAPVLVKLGEPVIIEANSQGFHAKMTGVAMDSGKQGEPIRVK 200

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +++   +  G V+ 
Sbjct: 201 NSRSGKVITAYPISKGRVQT 220


>gi|330445342|ref|ZP_08308994.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489533|dbj|GAA03491.1| flagella basal body P-ring formation protein FlgA [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 235

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV     L        VV +V +  G VL   +L    + +   RG+     ++++G
Sbjct: 101 WQLYVPVNVQLTLP----KVVAAVALGRGMVLTPDKLSVQMIESRFQRGSSFDDPREIIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    ++    +    ++ R   V I    G + I T G ALSD +IGD I V+
Sbjct: 157 SKVKRSVKAGEMVQARDI---CLVCRNDSVIIRAGTGGLNIVTKGKALSDGAIGDEIRVQ 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  M+   +   G V V
Sbjct: 214 NTKSRRMIDAIITAVGEVTV 233


>gi|84388085|ref|ZP_00990981.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
           12B01]
 gi|84377152|gb|EAP94022.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
           12B01]
          Length = 234

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S+   +    V  +  +  GE++ +  +    ++ +  R     + + V+G
Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTAPQQVIG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ L P  V+    +    V+ R  KV I   +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     V V
Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232


>gi|120597301|ref|YP_961875.1| SAF domain-containing protein [Shewanella sp. W3-18-1]
 gi|146294554|ref|YP_001184978.1| SAF domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120557394|gb|ABM23321.1| SAF domain [Shewanella sp. W3-18-1]
 gi|145566244|gb|ABP77179.1| SAF domain [Shewanella putrefaciens CN-32]
          Length = 245

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV +   L A +     V S  +   EV+    L+   +  +    +     K ++ 
Sbjct: 108 WSLYVRAKVDLSAYIP----VTSKTLERDEVVTAENLQWKMLPLTASDQDIITDEKHILD 163

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +  +  I  + L  P+++S G +V I         +  G+A+     GD I V+
Sbjct: 164 QAVARKIRKNKPIRTNNLSAPWLVSIGEEVIIEAASATFYANMLGVAMDAGKQGDAIRVR 223

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G +++   V  G V+ 
Sbjct: 224 NTSSGKIITAYPVAKGRVQT 243


>gi|302392938|ref|YP_003828758.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
           arabaticum DSM 5501]
 gi|302205015|gb|ADL13693.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
           arabaticum DSM 5501]
          Length = 328

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 58/129 (44%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +     +V    I   + L E++ K  +     +       +  +      R +    ++
Sbjct: 200 TAYQRVLVAQESIKRRQSLAENQFKWEKRPLVKLHSQPFTDVDSIQNYRLERSINTGQIL 259

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             +++  P ++ R  +V+II   G + +STAG+AL   + G+ I V+NI +   +   V+
Sbjct: 260 TRNLIEIPPLVKRRDRVKIIAVVGRVRVSTAGVALESGTEGEHIKVRNIKSNREIMAKVI 319

Query: 143 DTGTVRVVV 151
              TV+V++
Sbjct: 320 GKKTVKVIL 328


>gi|146341905|ref|YP_001206953.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium sp. ORS278]
 gi|146194711|emb|CAL78736.1| putative flagellar protein FlgA [Bradyrhizobium sp. ORS278]
          Length = 351

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 58/122 (47%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           AVV +  I+  EV+    L+  +     + G    S +  VG+  RR +     +  + L
Sbjct: 197 AVVLTRNIDRNEVIRAGDLQTERRPKVELGGAEPASRELAVGMQMRRPVRAGQALKATDL 256

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P ++ R   V +I     + ++T G AL   + GDV++V N+ +   ++G V+  G V
Sbjct: 257 AKPDLVQRDQTVTLIYQTAGIYLTTRGKALESGTEGDVVSVLNLQSKRTITGRVIGRGQV 316

Query: 148 RV 149
            +
Sbjct: 317 SI 318


>gi|197120122|ref|YP_002140549.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           bemidjiensis Bem]
 gi|197089482|gb|ACH40753.1| flagellar basal body P-ring formation protein FlgA [Geobacter
           bemidjiensis Bem]
          Length = 246

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +   VV +  +  GEVL  S L   +   S  RG Y     +  GL  +  + 
Sbjct: 113 VQVEVEALADMVVAARTLERGEVLLASDLSVAKRDLSLARGGYLKEPDEAAGLRVKATMR 172

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +    L +  V+  G  V I+     + ++ +G A    + GDVI V+N+ +   +
Sbjct: 173 ANTPVRKDNLEKVPVVKSGQMVTILAENDVVKVTASGRAKGAGAPGDVITVQNLSSQKEI 232

Query: 138 SGSVVDTGTVRV 149
           +  VVD  TV+V
Sbjct: 233 AARVVDAATVKV 244


>gi|90579902|ref|ZP_01235710.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
 gi|90438787|gb|EAS63970.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
           S14]
          Length = 235

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV     L        VV SV +  G V+   +L    V +   RGN      +++G
Sbjct: 101 WQLYVPVNVQLTLP----KVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I    +    ++ R   V I    G + I T G ALSD +IG+ I V+
Sbjct: 157 SKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQ 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  M+   +   G V V
Sbjct: 214 NKTSRRMIDAIITAVGEVTV 233


>gi|328473460|gb|EGF44308.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           parahaemolyticus 10329]
          Length = 198

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    S    +I    V +  +  GE+++ S +    +     R +   S + VVG
Sbjct: 64  WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 119

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    V+ R  KV I   +  MTI+T G AL D + GD + VK
Sbjct: 120 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 176

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++ G V D   + + 
Sbjct: 177 NDKSQRIIEGIVTDIAEITIT 197


>gi|254512113|ref|ZP_05124180.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
           bacterium KLH11]
 gi|221535824|gb|EEE38812.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
           bacterium KLH11]
          Length = 137

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
           L L  +  + +   VVP+  I A EV++ S L+   V           S + ++G   R 
Sbjct: 6   LMLALMPLTAMAEIVVPNRTIRAKEVISASDLEIRAVE----AQGAVRSAEALIGQEARI 61

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L P   I  S +  P ++ R   V ++  +  ++I+T G AL   + G+ I V N+ + 
Sbjct: 62  ALYPGRPIRPSDIGPPAIVDRNDLVMLVFDRVALSITTEGRALGRGAAGERIRVMNLSSR 121

Query: 135 VMVSGSVVDTGTVRV 149
             V+G +   G + V
Sbjct: 122 TTVTGVIRPDGQIEV 136


>gi|260767775|ref|ZP_05876710.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260617284|gb|EEX42468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|315179393|gb|ADT86307.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           furnissii NCTC 11218]
          Length = 218

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    +L   +    V     I  G+++  + +    V     R     S   VVG
Sbjct: 84  WKVYVPVRLTLTVPM----VTALTPITRGQIITANDVTISMVDLLRFRRQGFSSQDLVVG 139

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T++ L    VI  + +    V+ R   V I      M+I+T G ALSD ++GD I VK
Sbjct: 140 AKTKKNLKLGDVIEQNDV---CVVCRNESVMIRAISAGMSITTKGTALSDGTLGDQIKVK 196

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V   G V V
Sbjct: 197 NDKSNRIIDGKVSGIGEVTV 216


>gi|149188060|ref|ZP_01866355.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
 gi|148838048|gb|EDL54990.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
          Length = 248

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV    S+   +    V  +  ++ G +++   +    V  +  R         VVG
Sbjct: 114 WRLYVPVRMSISLPL----VTATRPLSRGNIVSSDDVTMSMVDKNRFRRQGFTEFDQVVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    V+ R  KV I   +G MTIST G AL+D + GD + VK
Sbjct: 170 AKLKKNMNMGDVIERNDV---CVVCRNEKVVIRAVKGEMTISTKGTALTDGANGDQVRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  ++ G V     + V
Sbjct: 227 NDKSQRIIEGIVTGVAEITV 246


>gi|83955139|ref|ZP_00963795.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
 gi|83840468|gb|EAP79641.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
          Length = 227

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           V       A V     VP+  I   E++    +  +++    +     +    +VG   R
Sbjct: 90  VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYDQLVGQQVR 149

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           R+L+    +P + +  P +ISRG KV+I LT G + ++  G AL DA  G  + V N+ +
Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209

Query: 134 GVMVSGSVVDTGTVRVV 150
              +S   +  G V VV
Sbjct: 210 NKALSTIAMAAGVVEVV 226


>gi|154253002|ref|YP_001413826.1| flagellar basal body P-ring biosynthesis protein FlgA [Parvibaculum
           lavamentivorans DS-1]
 gi|154156952|gb|ABS64169.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 326

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 64/146 (43%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           VR     +L  L   +  A  +    V    +  G+++    +  +++  + +  N   S
Sbjct: 163 VRAPAHDALSPLRRVTGRAYPVLDVPVLVRDMQPGDIVRHQDIDWVRMPANRVSQNMIAS 222

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           I  +VG+  R        + LS +  P V+ + A+V +    G +T++  G AL   ++G
Sbjct: 223 IDHLVGMSPRHPARAGEPLRLSDMQPPLVVEKNAQVDMTFVSGALTLTARGRALQSGAVG 282

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
           D++ V NI +   V G V     +R+
Sbjct: 283 DIVNVLNIRSNRTVQGIVTGPNLIRI 308


>gi|254464729|ref|ZP_05078140.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium Y4I]
 gi|206685637|gb|EDZ46119.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium Y4I]
          Length = 140

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
                  ++P   I A E++N   L                   DV G+  R  L     
Sbjct: 16  PPAWADYLIPLRTIRAKEIVNPEDLALKNGEI----LGALSDPADVTGMEARVSLYAGRP 71

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +I R   V +I  QG +TI+  G AL   + G+ + V N+ +   V+G +
Sbjct: 72  LRPGDIGPPAIIERNDLVTLIFRQGVLTIAAEGRALGRGAAGEAVRVMNLSSRTTVTGRI 131

Query: 142 VDTGTVRV 149
            + G+V V
Sbjct: 132 KEDGSVEV 139


>gi|288958676|ref|YP_003449017.1| FlgA protein [Azospirillum sp. B510]
 gi|288910984|dbj|BAI72473.1| FlgA protein [Azospirillum sp. B510]
          Length = 259

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 14  VLSLDSLFASVIGHAV------VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           V++   +   V G A       V S  I  G+V+    +    V       + A +   +
Sbjct: 110 VVTGSQVRLPVSGRAFGVVQIPVLSRRIIPGDVIGPGDIDWQDVRADQTTSDTAATDAQL 169

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           +G+  +R +  +  + L  L  P +I +GA V I LT  +MT++T G AL D   G+VI 
Sbjct: 170 IGMTPKRGVSTNQPVRLRDLQSPRMIDKGAMVTITLTTPSMTLTTQGKALQDGGKGEVIR 229

Query: 128 VKNIDTGVMVSGSVVDTGTVRVV 150
           V N  +  +V  +V     V V 
Sbjct: 230 VVNTQSNRIVEATVAGPNVVAVA 252


>gi|308273545|emb|CBX30147.1| hypothetical protein N47_D29560 [uncultured Desulfobacterium sp.]
          Length = 251

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 56/129 (43%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           +  V    V  S  +N G+V+    +   +   S +  +    +   +G + +  +  + 
Sbjct: 121 WVDVFDSVVCASHNLNRGDVITAGDIHLERKNISRLNSDTLKDVDQAIGFMAKHDIKDND 180

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            +   +L +  ++++G  V I+   G++ I+  G  L    +GD I V+N  +   V   
Sbjct: 181 CLKEWMLKKTPLVNKGDMVTILAEHGSIRITAPGRILEKGYMGDYIKVQNTMSKKSVYAK 240

Query: 141 VVDTGTVRV 149
           +V+  TV V
Sbjct: 241 IVNDSTVVV 249


>gi|152990360|ref|YP_001356082.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
 gi|151422221|dbj|BAF69725.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
          Length = 238

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           + + VV    I  G ++ +  L   ++      G     +++++G V R  +  +  I  
Sbjct: 115 LANVVVAVHDIPRGSLIQKKDLAVQKMVTH---GKNYPDLQEIIGSVARVNIYKNRKITR 171

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
            ++   Y + +   VRII  +G + I   G+AL +   GD+I VKNI T  ++   V+  
Sbjct: 172 YMIEPNYAVKKRQNVRIIYAKGPIRIELLGLALQNGKRGDIIKVKNISTNKVLECKVLSD 231

Query: 145 GTVRVVV 151
           G V+ + 
Sbjct: 232 GVVQFLY 238


>gi|300024605|ref|YP_003757216.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526426|gb|ADJ24895.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 153

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 4   VRFLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           ++ L   +L+VL L    ++   +    VP+ VI  G+++    L + QV  S+      
Sbjct: 2   MKSLALGTLFVLGLAGAASADDALRTVFVPNNVIYPGDMITADALVQRQVRVSSGNMAVF 61

Query: 62  -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + KD++G + RR LL +  +P S +     + +G   ++I    +++I   GIA    
Sbjct: 62  GENPKDLIGKMARRTLLRNEYVPRSAVREQDAVLQGKPYKVIYNSESLSIVGEGIAQKAG 121

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++GD+I+V+N  TGVM    V    T+ V
Sbjct: 122 AVGDIISVRNTATGVMFKARVQADQTLAV 150


>gi|83944161|ref|ZP_00956617.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
 gi|83845028|gb|EAP82909.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
          Length = 227

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 63/137 (45%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           V       A V     VP+  I   E++    +  +++    +     +  + +VG   R
Sbjct: 90  VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYEQLVGQQVR 149

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
           R+L+    +P + +  P +ISRG KV+I LT G + ++  G AL DA  G  + V N+ +
Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209

Query: 134 GVMVSGSVVDTGTVRVV 150
              +S   +  G V VV
Sbjct: 210 NKALSTIAMAAGVVEVV 226


>gi|78485818|ref|YP_391743.1| flageller protein FlgA [Thiomicrospira crunogena XCL-2]
 gi|78364104|gb|ABB42069.1| Flageller basal body P-ring formation protein FlgA [Thiomicrospira
           crunogena XCL-2]
          Length = 245

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV +L      V    VV +  I    V+++  +K++ V     +      +   +G
Sbjct: 109 WKVYVTALVEGDVPV----VVTTKAILKQAVIHKEDVKQILVPYQKSKTGALIDVDSAIG 164

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  +R L P+ ++ +  L  PY++     V II   GN+ + + G AL D      + V+
Sbjct: 165 MRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVPVE 224

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +  ++ G V+   TV V
Sbjct: 225 NLSSKKIIKGIVIAPNTVLV 244


>gi|108807169|ref|YP_651085.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Antiqua]
 gi|108812487|ref|YP_648254.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Nepal516]
 gi|145598614|ref|YP_001162690.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Pestoides F]
 gi|108776135|gb|ABG18654.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|108779082|gb|ABG13140.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Antiqua]
 gi|145210310|gb|ABP39717.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides F]
          Length = 251

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 124 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 183

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 184 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 242

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 243 DDGTIRIML 251


>gi|89075488|ref|ZP_01161899.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           sp. SKA34]
 gi|89048760|gb|EAR54331.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
           sp. SKA34]
          Length = 235

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV     L        VV SV +  G V+   +L    V +   RGN      +++G
Sbjct: 101 WQLYVPVNVQLTLP----KVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I    +    ++ R   V I    G + I T G ALSD +IG+ I V+
Sbjct: 157 SKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQ 213

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  M+   +   G V V
Sbjct: 214 NRTSRRMIDAIITAVGEVTV 233


>gi|320354343|ref|YP_004195682.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
           propionicus DSM 2032]
 gi|320122845|gb|ADW18391.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
           propionicus DSM 2032]
          Length = 278

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +N G+V+N+S +  MQ     +   Y  S + ++G+   R +    V+  + +  P ++ 
Sbjct: 163 LNKGDVINDSNIAVMQQDIGGLNHPY-TSKEQLIGMQVARTVNAGTVLEQAHIAAPPIVK 221

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            G  V+I   +G + +ST+G+A +D  +G++I VKNI +  ++   V   G V V
Sbjct: 222 DGEMVKIFARKGALQLSTSGLAKTDGRLGEIIQVKNIGSNKLIHCRVDGPGMVSV 276


>gi|260779351|ref|ZP_05888243.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605515|gb|EEX31810.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 265

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +++  + VV    IN  + ++   LK  + T  N   ++   +  V G+V  R + 
Sbjct: 133 VAIKSALTLNVVVTKTGINRDQAISPMNLKLEKRTL-NREQDFFTQLSQVSGMVASRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              ++    L    ++++G +V I  ++   T ST G+AL   + G+ I V+N  +G ++
Sbjct: 192 SGQILDPRKLESTPLVAKGNQVVITASKNGFTASTKGVALEQGTRGEQIDVQNSSSGKVI 251

Query: 138 SGSVVDTGTVRV 149
              V     V+ 
Sbjct: 252 KAVVTGLNQVQT 263


>gi|186895110|ref|YP_001872222.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
 gi|186698136|gb|ACC88765.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis PB1/+]
          Length = 259

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 132 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 191

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 192 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 250

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 251 DDGTIRIML 259


>gi|312884838|ref|ZP_07744530.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367490|gb|EFP95050.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 265

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            ++ +S+    VV    IN  + L    +  +  T +  +  +   + DV+   T R + 
Sbjct: 133 VTVKSSLTLDVVVAKTGINRDQALTPDSVHLVPRTLT-HQQEFYTHVSDVLEKTTTRRIR 191

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
             H+I    L+ P ++  G +V I  ++   + +T GIAL   + G+ I V+N+ +G  +
Sbjct: 192 SGHIITPKTLNAPAMVEVGNQVIISASKDRFSATTKGIALEKGNKGEQITVQNVSSGKTI 251

Query: 138 SGSVVDTGTVRV 149
             +V+    V+ 
Sbjct: 252 QATVIGHNKVQT 263


>gi|94500235|ref|ZP_01306768.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
           RED65]
 gi|94427534|gb|EAT12511.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
           RED65]
          Length = 248

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++L V    ++ A V    VV +  +     L    L       +++R  Y    ++V+G
Sbjct: 111 WALNVPVELNIKAPV----VVLNQPVPKDIELQARHLDLEIHNLADLRSGYFLKKENVIG 166

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             ++R L    V+   ++    ++ +G +V I  ++G M++   G AL+D   G  I VK
Sbjct: 167 KQSKRGLAGQTVLNGRLVLPALLVKKGDRVIISASKGPMSVKMPGEALNDGREGRQIRVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +  ++  +V ++G V V
Sbjct: 227 NLRSERIIRATVEESGVVSV 246


>gi|258621043|ref|ZP_05716077.1| flagellar protein, putative [Vibrio mimicus VM573]
 gi|258625271|ref|ZP_05720179.1| flagellar protein, putative [Vibrio mimicus VM603]
 gi|258582444|gb|EEW07285.1| flagellar protein, putative [Vibrio mimicus VM603]
 gi|258586431|gb|EEW11146.1| flagellar protein, putative [Vibrio mimicus VM573]
          Length = 255

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + + V+G
Sbjct: 121 WRIYVPVRLTITIPLIT----AAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  S +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 177 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254


>gi|22126394|ref|NP_669817.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis KIM 10]
 gi|45441413|ref|NP_992952.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis biovar Microtus str. 91001]
 gi|162419453|ref|YP_001606469.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis Angola]
 gi|165926043|ref|ZP_02221875.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938691|ref|ZP_02227246.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010841|ref|ZP_02231739.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166210809|ref|ZP_02236844.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167401018|ref|ZP_02306521.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420243|ref|ZP_02311996.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425844|ref|ZP_02317597.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469716|ref|ZP_02334420.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           FV-1]
 gi|270486649|ref|ZP_06203723.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|294504034|ref|YP_003568096.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           Z176003]
 gi|21959381|gb|AAM86068.1|AE013854_4 putative flagella basal body P-ring formation protein [Yersinia
           pestis KIM 10]
 gi|45436274|gb|AAS61829.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162352268|gb|ABX86216.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Angola]
 gi|165913305|gb|EDR31927.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922247|gb|EDR39424.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990185|gb|EDR42486.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207989|gb|EDR52469.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961938|gb|EDR57959.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049407|gb|EDR60815.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055243|gb|EDR65040.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|262361780|gb|ACY58501.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           D106004]
 gi|262366084|gb|ACY62641.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           D182038]
 gi|270335153|gb|EFA45930.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           KIM D27]
 gi|294354493|gb|ADE64834.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
           Z176003]
          Length = 254

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 127 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 186

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 187 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 245

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 246 DDGTIRIML 254


>gi|157373211|ref|YP_001471811.1| SAF domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157315585|gb|ABV34683.1| SAF domain [Shewanella sediminis HAW-EB3]
          Length = 248

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 4/142 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +SL+V +       V     V +  +  GE +    ++   +       +      D++
Sbjct: 110 AWSLFVRAKV----KVTARLPVANRAMKRGEFIGAQDIEWHPIVLGASDRDLLTKTDDII 165

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G    R L     I L  L+ P  ++ G +V I         + AG AL     G+ I V
Sbjct: 166 GRQVNRKLRRHRAIQLHHLNAPQWVNIGDRVIIEARSQGFYANMAGEALESGGEGEAIRV 225

Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
           KN+ +G +++      G V  V
Sbjct: 226 KNLSSGKVITAFPTAKGRVTTV 247


>gi|297570290|ref|YP_003691634.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926205|gb|ADH87015.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 247

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 61/129 (47%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +G  V+ +  IN GEV++   L   +     + G+  +    V G+  R  L    ++
Sbjct: 119 QRMGQVVMTARRINRGEVISRDDLVVHRRDIGMLDGSIINDPALVAGMQLRTTLQAGAIV 178

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L +P ++ RG +V I  + G + ++  G      + GD++ V+N+ +   +   VV
Sbjct: 179 YQNLLEKPPLVRRGDRVTIRASTGRVLVNAPGEVREIGAEGDLVRVRNLMSRREIMARVV 238

Query: 143 DTGTVRVVV 151
           ++G V   +
Sbjct: 239 NSGLVETEL 247


>gi|59712487|ref|YP_205263.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           fischeri ES114]
 gi|59480588|gb|AAW86375.1| flagellar P-ring chaperone FlgA [Vibrio fischeri ES114]
          Length = 255

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L   +    V     ++ G  ++ S L    V +   +     ++ D+VG
Sbjct: 121 WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 176

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R   V I   +G ++I T G AL D ++GD + VK
Sbjct: 177 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 233

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +V+G V   G + +
Sbjct: 234 NDKSNRIVNGIVTSVGEISI 253


>gi|77747859|ref|NP_637319.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|77761201|ref|YP_243307.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188991646|ref|YP_001903656.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167733406|emb|CAP51607.1| Flagella basal body P-ring formation protein flgA precursor
           [Xanthomonas campestris pv. campestris]
          Length = 214

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I +GE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVLADPATAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L  P ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|170748106|ref|YP_001754366.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170654628|gb|ACB23683.1| FlgA, flagellar basal-body P-ring formation protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 142

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VP   I AG+V+  + L+E         R   A +    VG + RR LLP   IP   L 
Sbjct: 19  VPVATIYAGDVIKPTMLREQAFPEGYRPRLPVADTAARAVGRIARRTLLPGETIPSIALE 78

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              +++RGA   I+  +  +TIST G AL++A++ + + V+N  TG +V G V   G VR
Sbjct: 79  EAKLVTRGAPAVIVFEEHGVTISTVGTALANAAVNEAVNVRNAATGRVVQGIVQPDGRVR 138

Query: 149 V 149
            
Sbjct: 139 T 139


>gi|126738577|ref|ZP_01754282.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
           SK209-2-6]
 gi|126720376|gb|EBA17082.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
           SK209-2-6]
          Length = 138

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 4/138 (2%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           L    +     S +   +VP   I A E++  + L   +V               VVG+ 
Sbjct: 4   LLAFLIAVTAQSALADILVPLRTIRAKEIIQATDLTFKKVNLP----GALSDANVVVGME 59

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            R  L P   +    +  P ++ R   V +   QG +TI T G +L   S G++I V N+
Sbjct: 60  ARVALYPGRPMRAGDIGPPAIVDRNDLVTLAYRQGGLTIITEGRSLGRGSEGEIIKVMNL 119

Query: 132 DTGVMVSGSVVDTGTVRV 149
            +   V+G +   G+V V
Sbjct: 120 ASRSTVTGRINADGSVEV 137


>gi|262166287|ref|ZP_06034024.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           VM223]
 gi|262170819|ref|ZP_06038497.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|261891895|gb|EEY37881.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           MB-451]
 gi|262026003|gb|EEY44671.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
           VM223]
          Length = 247

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + + V+G
Sbjct: 113 WRIYVPVRLTITIPLIT----AAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 168

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  S +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 169 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 225

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 226 NDKSNRIIDAQVSGVGEVTVA 246


>gi|264676566|ref|YP_003276472.1| flagellar protein FlgA [Comamonas testosteroni CNB-2]
 gi|299531290|ref|ZP_07044700.1| SAF domain-containing protein [Comamonas testosteroni S44]
 gi|262207078|gb|ACY31176.1| flagellar protein FlgA [Comamonas testosteroni CNB-2]
 gi|298720697|gb|EFI61644.1| SAF domain-containing protein [Comamonas testosteroni S44]
          Length = 252

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 73/149 (48%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV+  + +++++      +    G A V    I AG+ L+       +V  +      
Sbjct: 108 LRCVQGSVPWNVFLPITVRAY----GPAWVAQGNIPAGKTLSAEDAAPAEVDWAEDSAPV 163

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + +D +G+V  R L     +  +++  P + + G+ V++++  G  +++ +G A++ A
Sbjct: 164 FANAQDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMTAA 223

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             G  + V+ +D G +V+G+V  +G V V
Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251


>gi|51596007|ref|YP_070198.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
 gi|51589289|emb|CAH20910.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 32953]
          Length = 232

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 105 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 224 DDGTIRIML 232


>gi|78047591|ref|YP_363766.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78036021|emb|CAJ23712.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 252

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RRVL
Sbjct: 118 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRVL 177

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 178 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 237

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 238 VQGIVEASGTVVV 250


>gi|149366255|ref|ZP_01888290.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CA88-4125]
 gi|218928918|ref|YP_002346793.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pestis CO92]
 gi|229896238|ref|ZP_04511408.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides A]
 gi|229897173|ref|ZP_04512329.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229897899|ref|ZP_04513050.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229902869|ref|ZP_04517986.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|115347529|emb|CAL20438.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CO92]
 gi|149292668|gb|EDM42742.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           CA88-4125]
 gi|229680316|gb|EEO76415.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Nepal516]
 gi|229688940|gb|EEO81005.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229693510|gb|EEO83559.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229701161|gb|EEO89190.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           Pestoides A]
 gi|320015471|gb|ADV99042.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 232

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 105 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 224 DDGTIRIML 232


>gi|254516984|ref|ZP_05129042.1| SAF domain protein [gamma proteobacterium NOR5-3]
 gi|219674489|gb|EED30857.1| SAF domain protein [gamma proteobacterium NOR5-3]
          Length = 252

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LY+ +  S    +     V    +  G +L    L+ +    ++   +     +   G
Sbjct: 116 WTLYLRAEVSASLELP----VLVNALPRGTILAPGDLEMVTRRITSQANDIIVDPQMAAG 171

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  +R L     +    +  P ++SRG  V +I     + +   G A+   + GD + V 
Sbjct: 172 MELKRPLAAGSTLRHGHVDLPELVSRGQMVTLIAGGAGVEVRMQGKAMGSGAEGDRLLVT 231

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +G  V G V+  G++R+
Sbjct: 232 NLASGRRVEGLVLSDGSIRI 251


>gi|255021350|ref|ZP_05293398.1| Flagellar basal-body P-ring formation protein flgA
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969213|gb|EET26727.1| Flagellar basal-body P-ring formation protein flgA
           [Acidithiobacillus caldus ATCC 51756]
          Length = 226

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV              VV +  + AG VL    L  M    +++ G    S+ +  G
Sbjct: 89  WTVYVPVRIVQ----SQKIVVAAHSLTAGTVLTAGDLALMPGNAASLAGTPLSSLSEATG 144

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              R   +    I  S+L  P  +  G  V ++     + I+T   A+ +   G  I V+
Sbjct: 145 RTLRFGTVAGQPITQSMLAAPIWVHGGNNVTLVAEGDGVRITTLAQAIENGHPGQSILVR 204

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +G +V G+V    TVRV
Sbjct: 205 NLQSGRVVRGTVTAVATVRV 224


>gi|24459271|gb|AAL86624.1| FlgA [Vibrio fischeri ES114]
          Length = 248

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L   +    V     ++ G  ++ S L    V +   +     ++ D+VG
Sbjct: 114 WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R   V I   +G ++I T G AL D ++GD + VK
Sbjct: 170 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +V+G V   G + +
Sbjct: 227 NDKSNRIVNGIVTSVGEISI 246


>gi|221069326|ref|ZP_03545431.1| flagella basal body P-ring formation protein FlgA [Comamonas
           testosteroni KF-1]
 gi|220714349|gb|EED69717.1| flagella basal body P-ring formation protein FlgA [Comamonas
           testosteroni KF-1]
          Length = 252

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 74/149 (49%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV+  + +++++  +   +    G A V    I AG+ L+       +V  +      
Sbjct: 108 LRCVQGSVPWNVFLPIIVRAY----GPAWVAQGNIPAGKTLSAEDAVPAEVDWAEDSAAV 163

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + +D +G+V  R L     +  +++  P + + G+ V++++  G  +++ +G A++ A
Sbjct: 164 FANAEDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMAAA 223

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             G  + V+ +D G +V+G+V  +G V V
Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251


>gi|51246534|ref|YP_066418.1| flagellar protein (FlgA) [Desulfotalea psychrophila LSv54]
 gi|50877571|emb|CAG37411.1| related to flagellar protein (FlgA) [Desulfotalea psychrophila
           LSv54]
          Length = 315

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
            I   +V    +     L+ +    ++   SNI      S +   G   RR +  D VI 
Sbjct: 189 AIAPVLVAREALRRDTELSPNNFSIIRRDISNISDPLF-SARQAEGQRLRRRIRKDDVIR 247

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            S L    V+ RG +V+I L  GN+ + T G+A +D  + D I V+NI++  ++   VV 
Sbjct: 248 ASSLEHVPVVHRGDRVKIHLLSGNLQVVTLGVARADGGVHDFIRVQNINSKKIIYCQVVA 307

Query: 144 TGTVRV 149
            G V+V
Sbjct: 308 PGIVKV 313


>gi|121596113|ref|YP_988009.1| SAF domain-containing protein [Acidovorax sp. JS42]
 gi|222112268|ref|YP_002554532.1| flagella basal body p-ring formation protein flga [Acidovorax
           ebreus TPSY]
 gi|120608193|gb|ABM43933.1| SAF domain protein [Acidovorax sp. JS42]
 gi|221731712|gb|ACM34532.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           ebreus TPSY]
          Length = 250

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 5/148 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV     +++++      F    G A V +  +  G VL+E    E +V  +      
Sbjct: 105 LRCVDGPTRWNVFLPITVKAF----GPAWVLAGNVGTGAVLSEQDAIEAEVDWAAEPAAI 160

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + KD VG    R L     +  +++  P +   G+ VR+++      ++++G A+S  
Sbjct: 161 VANPKDWVGQTATRPLSAGQALRQNMVRAPDLFKAGSAVRVVVQGPGYAVTSSGQAMSAG 220

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           + G  + V+ +  G ++ G+V++ GT+ 
Sbjct: 221 AQGQSVRVR-MANGRIIGGTVLEDGTIE 247


>gi|262404546|ref|ZP_06081101.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC586]
 gi|262349578|gb|EEY98716.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC586]
          Length = 255

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +  ++    +  +  ++ G++++   +    V     R     +   V+G   ++ + 
Sbjct: 125 VPVRLTITIPLLTAANPLSRGQMISIQDVTISMVDLLRFRRQGFSTPDTVIGAKIKKNVR 184

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              VI  S +    ++ R   V I   +  M+I+T G A+SD  IG+ I VKN  +  ++
Sbjct: 185 VGDVIEQSDV---CIVCRNESVVIKAGRSGMSITTKGTAMSDGVIGEQIKVKNDKSNRII 241

Query: 138 SGSVVDTGTVRVV 150
              V   G V V 
Sbjct: 242 DAQVSGVGEVTVA 254


>gi|254504988|ref|ZP_05117139.1| SAF domain family [Labrenzia alexandrii DFL-11]
 gi|222441059|gb|EEE47738.1| SAF domain family [Labrenzia alexandrii DFL-11]
          Length = 326

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
               +  A  +   +V    +  G+++ +  L  +++    +         ++VG   R 
Sbjct: 177 PLTVTGTAVEMIDVLVLGQPLKRGDIVQDGDLTTIRLPRLKVNTAALEDGTNIVGKAARV 236

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            L P   +       P ++ RG KV +    G M +++   AL++ + GDVI V N+ + 
Sbjct: 237 NLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTNGAKGDVIDVMNLQSR 296

Query: 135 VMVSGSVVDTGT 146
            +V  +V   G 
Sbjct: 297 RVVPATVTSRGQ 308


>gi|170024651|ref|YP_001721156.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis YPIII]
 gi|169751185|gb|ACA68703.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis YPIII]
          Length = 269

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 142 QVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 201

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 202 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 260

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 261 DDGTIRIML 269


>gi|322421661|ref|YP_004200884.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M18]
 gi|320128048|gb|ADW15608.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
           M18]
          Length = 238

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 60/132 (45%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +   VV +  +  GEVL+ S L  ++   + ++G Y   I +  GL  +  L 
Sbjct: 105 VLVEVEALAEMVVAARTLERGEVLSASDLAVVKRDLAQVQGRYFKEIGEAAGLRVKSTLK 164

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +    L +  ++  G  V I+     + I+  G A    + GD+I V+N+ +   +
Sbjct: 165 ANSPVRKDNLEKVPIVKSGQVVTIVAENDVVRITATGRAKVAGAQGDLITVQNLSSQKEI 224

Query: 138 SGSVVDTGTVRV 149
           +  VVD  TV+V
Sbjct: 225 AARVVDAATVKV 236


>gi|209884525|ref|YP_002288382.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
 gi|209872721|gb|ACI92517.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
          Length = 351

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 1/131 (0%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           FA     A V    I   E++  S L   +   + + G+    ++  +G+ TRR +    
Sbjct: 195 FAVETVQAAVLMRPIGRNEIIKASDLNVERRPKAEVGGDAI-PLEQAIGMQTRRAMRIGD 253

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            +  S L +  +++R   + ++     + +++ G AL   + GD ++V N+ +   V G 
Sbjct: 254 ALRSSDLAKADLVTRDQTISLVYETPGLYLTSRGKALEAGTKGDTVSVLNLQSKRTVQGI 313

Query: 141 VVDTGTVRVVV 151
           VV  G V ++ 
Sbjct: 314 VVGPGQVAIIA 324


>gi|85712248|ref|ZP_01043299.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
           baltica OS145]
 gi|85693875|gb|EAQ31822.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
           baltica OS145]
          Length = 233

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           +    +  YV      + +V       +  +  G ++  S L +++V  S +R N     
Sbjct: 94  QSQPAWRTYVPVRIYRYKTVWA----AATPMQPGHLIAASDLTQVEVDVSQVRANLFEDN 149

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           + ++G  T+R +     I         ++  G +V I+     + I+  G AL+D   G+
Sbjct: 150 QLLIGSRTKRRVAAGKAIEARDT---CLVCEGEQVTIVAKSKALKITATGEALADGLQGE 206

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
            +AVKN+ +   +   V     V V
Sbjct: 207 SVAVKNVRSNKSLEAIVTGLNEVTV 231


>gi|254477189|ref|ZP_05090575.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
           R11]
 gi|214031432|gb|EEB72267.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
           R11]
          Length = 138

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 +VP   I A E++    L                   +V+G   R  L     +
Sbjct: 15  PAWAEILVPVRTIRAKEIVTAEDLALKSADV----LGALSDPSEVIGKEARVALYAGRPV 70

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               +  P ++ R   V I  T+G +TI   G +L   + G+ I V N+ +   V+G + 
Sbjct: 71  RAGDVGPPAIVERNDLVTIRFTRGGLTIMAEGRSLGRGADGEAIRVMNLSSRTTVTGRIA 130

Query: 143 DTGTVRV 149
             GTV V
Sbjct: 131 SDGTVEV 137


>gi|323492342|ref|ZP_08097495.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
 gi|323313389|gb|EGA66500.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
           brasiliensis LMG 20546]
          Length = 216

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 1/130 (0%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            S+ +++  + +V    IN  + +    +   Q T  N   ++      V   +  R + 
Sbjct: 84  VSIKSTLTLNVLVAKSPINRDDSITRDLVTIEQRTL-NREQDFYTQFDQVRYKLATRRIR 142

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              +I    L  P ++++G +V I   +G  + +T G+AL   + G  I V+NI +G +V
Sbjct: 143 SGQIIDGRKLQTPALVAKGNQVIISAGKGGFSATTKGVALEQGAHGQQIEVRNISSGKVV 202

Query: 138 SGSVVDTGTV 147
              V     V
Sbjct: 203 KAVVTGLNQV 212


>gi|117926378|ref|YP_866995.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Magnetococcus sp. MC-1]
 gi|117610134|gb|ABK45589.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Magnetococcus sp. MC-1]
          Length = 236

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 52/121 (42%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
              V    +   +++    +    +  S     Y   ++++VG    R +  +  +  S 
Sbjct: 111 TVAVLKRQLKRDDIVALGDIDWQTIQISREGFRYVSDVREIVGKAASRPVRANIALQASW 170

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
              P  + RG +VR++L  G + I+T G+A  D  +G+ I V+N+ +       V+  G 
Sbjct: 171 FEEPVAVERGDRVRVLLKDGALVINTVGVAGKDGRVGEAILVRNLSSNKSFLARVMAPGQ 230

Query: 147 V 147
           V
Sbjct: 231 V 231


>gi|316932822|ref|YP_004107804.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris DX-1]
 gi|315600536|gb|ADU43071.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris DX-1]
          Length = 343

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 1/124 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  +   EV+  S +   +   S +  + A S    +G+  R+ L    ++  + L
Sbjct: 208 ATVLTRPVQRNEVIKTSDIATERRPKSEVASDAA-SRDGAIGMQARQPLRSGQILRNADL 266

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P +++R   V +I     + ++  G AL   + GDV+ V N+ +   ++G+V+  G V
Sbjct: 267 AKPDLVTRDQSVTLIYRTAGIYLTARGKALETGAEGDVVNVLNLQSKRTIAGTVIGRGQV 326

Query: 148 RVVV 151
            +  
Sbjct: 327 SITA 330


>gi|115523180|ref|YP_780091.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisA53]
 gi|115517127|gb|ABJ05111.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53]
          Length = 161

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPD 79
           A       VP   I  G+++ +  +   +    N+ G   +      VVG   RR LLP 
Sbjct: 30  AEEPVRFPVPVTTIYPGDLIKDEMI-IDRAFAPNMPGVAAFVGDRLTVVGRTARRTLLPG 88

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            +IP + +    +++RG+ V++++  G ++I T G +L     G  I ++N+DTGV + G
Sbjct: 89  RLIPNNAVEDQKIVNRGSVVKVVIEDGALSIVTYGSSLQSGGPGAFIQLRNLDTGVTIRG 148

Query: 140 SVVDTGTVRV 149
            V   G+VR+
Sbjct: 149 IVQPDGSVRI 158


>gi|153947896|ref|YP_001401294.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959391|gb|ABS46852.1| flagella basal body P-ring formation protein FlgA [Yersinia
           pseudotuberculosis IP 31758]
          Length = 232

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    + AGE ++   ++  Q     +            G V++R +     +
Sbjct: 105 QVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +++  G  V ++       +++ G A+++ +  + I V+ + +G +VSG+V 
Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 224 DDGTIRIML 232


>gi|326319093|ref|YP_004236765.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375929|gb|ADX48198.1| flagella basal body P-ring formation protein FlgA [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 259

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV     +++++      +    G A V +  + +G VL E+   + +V  +      
Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + ++ VG V  R L+    +   ++  P     GA VR++      ++++AG A++  
Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGAPVRVVAQGRGYSVTSAGQAVTAG 229

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           SIG+ + V+ +D G +++G V + GTV V
Sbjct: 230 SIGETVRVR-MDNGRVIAGIVSNDGTVEV 257


>gi|90423016|ref|YP_531386.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisB18]
 gi|90105030|gb|ABD87067.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
          Length = 370

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A V +  +   EVL  S +   +   + I G+ A S  D VG+  RR L     + L  
Sbjct: 217 DAAVLARGVERNEVLKSSDVVVERRPKAEIGGDAA-SRDDAVGMQARRQLRAGQALRLVD 275

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L +P ++SR   V +I     + ++  G AL   + GDV+ V N+ +   V+G+V+  G 
Sbjct: 276 LSKPDLVSRDQAVTLIYQSTGLYLTVRGKALESGTEGDVVNVINLQSKRTVAGTVIGRGQ 335

Query: 147 VRV 149
           V V
Sbjct: 336 VAV 338


>gi|294625269|ref|ZP_06703908.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292600443|gb|EFF44541.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 268

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 134 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 193

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 194 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 253

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 254 VQGIVEASGTVVV 266


>gi|56460258|ref|YP_155539.1| flagellar basal body P-ring biosynthesis protein FlgA [Idiomarina
           loihiensis L2TR]
 gi|56179268|gb|AAV81990.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
           loihiensis L2TR]
          Length = 240

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +  YV      + +V    V  +  +  G++++ES L   +V  + +R N    +  +VG
Sbjct: 106 WRTYVPVRIYRYKNV----VTAASPMAPGQMISESDLVFSEVDLNRVRSNVFTDMTALVG 161

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +     I  S      ++  G  V I+     + I+ AG AL+D   G+ + V+
Sbjct: 162 ARIKKRIAAGQAISASDT---CLVCEGQSVTIVAQDKTLRITAAGRALADGLKGESVVVE 218

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +   +   V     V V
Sbjct: 219 NARSNKSIQAVVTGLNEVTV 238


>gi|126730133|ref|ZP_01745945.1| flagellar basal-body P-ring formation protein FlgA [Sagittula
           stellata E-37]
 gi|126709513|gb|EBA08567.1| flagellar basal-body P-ring formation protein FlgA [Sagittula
           stellata E-37]
          Length = 138

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
                VV +  I   ++++   ++  Q T S        S+ DV+G  +R V+ P   + 
Sbjct: 15  AQAETVVATQTIRPQQIISPDAVRMDQATIS----GAYVSLDDVIGQESRYVIYPGRPLM 70

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
           +  +  P ++ R   V +I   G + I   G AL   + G+ I V N D+  ++ G++  
Sbjct: 71  IGAVGEPALVDRNQIVELIYAHGGLRILAEGRALDRGAEGERIRVMNSDSRTVLFGTIQP 130

Query: 144 TGTVRV 149
            G+V V
Sbjct: 131 DGSVLV 136


>gi|84624083|ref|YP_451455.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|84368023|dbj|BAE69181.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 214

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|292489137|ref|YP_003532024.1| flagella basal body P-ring formation protein FlgA [Erwinia
           amylovora CFBP1430]
 gi|292900256|ref|YP_003539625.1| flagella basal body P-ring formation protein [Erwinia amylovora
           ATCC 49946]
 gi|291200104|emb|CBJ47230.1| flagella basal body P-ring formation protein [Erwinia amylovora
           ATCC 49946]
 gi|291554571|emb|CBA22188.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia amylovora CFBP1430]
 gi|312173295|emb|CBX81550.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia amylovora ATCC BAA-2158]
          Length = 234

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V    + AG V+    ++    +  +        I  +VG  T R L     I  + L +
Sbjct: 112 VAKKNLPAGSVIRADDIETHAGSLDHQPAGILFDINQIVGQTTTRALNAGSPIVQNQLRQ 171

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +++  G  V I+       I + G AL++AS+ D + V+ + TG  +SG V   G V +
Sbjct: 172 QWLLHAGQMVDIVTHGEGFRIRSQGKALANASVDDTLKVQ-MRTGRTISGKVAHDGQVEI 230

Query: 150 VVK 152
           +++
Sbjct: 231 LLQ 233


>gi|206889894|ref|YP_002249847.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741832|gb|ACI20889.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 231

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 60/129 (46%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+    +  + +  GEV+ E ++ E++   S +          ++G V +R L    +I
Sbjct: 103 EVLTRVYITQIPLKRGEVITEEKIMEIKQPLSRLPVGAITDKNLLIGKVVKRSLTRGLII 162

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               L+    + +G+KV +I+  G + I T G+  SDA +G    V+   TG  + G +V
Sbjct: 163 KEDYLYSGMPVKKGSKVDVIINTGQVMIMTEGVLKSDAVVGGNARVQCFQTGKEIVGKLV 222

Query: 143 DTGTVRVVV 151
               VRV +
Sbjct: 223 GKDKVRVSL 231


>gi|294664586|ref|ZP_06729927.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292605643|gb|EFF48953.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 268

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 134 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKAARRIL 193

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 194 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 253

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 254 VQGIVEASGTVVV 266


>gi|317492432|ref|ZP_07950861.1| flagella basal body P-ring formation protein FlgA
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919771|gb|EFV41101.1| flagella basal body P-ring formation protein FlgA
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 226

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 5/151 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           R+     L     D  +  V     G   V S  ++ G+ ++ +    MQ     +    
Sbjct: 77  RWGTLSVLVQCPQDKRYLQVEVQVTGGYPVASAPLSRGQHISAADFNIMQGRLDRLPTGS 136

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              I  +   V  R L     +  S++ R ++I  G  V+I+       +++ G AL++A
Sbjct: 137 IMEISQLDNAVLTRDLAAGQSVTSSMMRRTWIIKAGQSVQILAQGDGFNVTSEGKALNNA 196

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           +I D + V+ + +G ++SG   + GT+ +++
Sbjct: 197 AIADNVRVR-LASGQIISGKATEQGTIELLM 226


>gi|120613055|ref|YP_972733.1| SAF domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120591519|gb|ABM34959.1| SAF domain protein [Acidovorax citrulli AAC00-1]
          Length = 259

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV     +++++      +    G A V +  + +G VL E+   + +V  +      
Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + ++ VG V  R L+    +   ++  P     G+ VR++      ++++AG A++  
Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGSPVRVVAQGRGYSVTSAGQAVTAG 229

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           SIG+ + V+ +D G +++G V + GTV V
Sbjct: 230 SIGETVRVR-MDNGRIIAGIVSNDGTVEV 257


>gi|170737034|ref|YP_001778294.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           cenocepacia MC0-3]
 gi|169819222|gb|ACA93804.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           cenocepacia MC0-3]
          Length = 252

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           + A +    +V +  + +G  LNE+  K+  V +  +  +        VG + RR +   
Sbjct: 119 VKAHIDAPVLVATTALRSGHTLNEADFKQ-DVRDFALTPDALTDPALAVGRMLRRTVKAG 177

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            VI   +L+    I RG  V+I    G + +S  G A+ + ++ +VI VKN  TG ++  
Sbjct: 178 QVIQARLLNGAETIRRGQAVQIEANTGPIRVSVPGTAMQNGAVDEVIRVKNASTGKVIFA 237

Query: 140 SVVDTGTVR 148
            V    TV 
Sbjct: 238 RVTGADTVE 246


>gi|319787126|ref|YP_004146601.1| flagella basal body P-ring formation protein FlgA
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317465638|gb|ADV27370.1| flagella basal body P-ring formation protein FlgA
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 206

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 4/141 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + LYV         V    VV +  + AGE L    L   Q   S + G         +G
Sbjct: 69  WRLYVPVRQRRSQQV----VVLARGVAAGETLTADALATAQRDASRLAGATLSDPAQALG 124

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V RR L+   V+    L  P ++ RG +V ++  +G + +  AG AL DA + + ++V+
Sbjct: 125 QVARRTLVAGSVLGAGDLASPRIVRRGDQVALVSRRGGVEVRVAGRALGDAGVDERVSVE 184

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N+ +  ++ G V   G V V 
Sbjct: 185 NLSSRRILQGRVAPGGDVLVA 205


>gi|78221653|ref|YP_383400.1| flageller protein FlgA [Geobacter metallireducens GS-15]
 gi|78192908|gb|ABB30675.1| flagellar protein FlgA [Geobacter metallireducens GS-15]
          Length = 236

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 59/132 (44%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +G  VV    +  G+V+  + +   +   S + G    S  +V+G   R  + 
Sbjct: 103 VPVEVEALGDTVVVLRALERGDVIGAADVTVQRRDLSTLTGRVYRSADEVIGKRARMPVR 162

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            +  +    L +  ++  G  V I++    M ++  G A  + + GD++ V+N+ +   V
Sbjct: 163 ANMPLRGDQLEKVPLVKSGQLVTILVENQAMRLTATGKARGNGAEGDIVMVQNLGSLKEV 222

Query: 138 SGSVVDTGTVRV 149
              V+D GTV+V
Sbjct: 223 PARVIDAGTVQV 234


>gi|148256793|ref|YP_001241378.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium sp. BTAi1]
 gi|146408966|gb|ABQ37472.1| putative flagellar protein FlgA [Bradyrhizobium sp. BTAi1]
          Length = 355

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 55/117 (47%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             ++  E++  S L+  +   + + G    S +  VG+  RR +     +  + L +P +
Sbjct: 205 RNVDRNEMIRSSDLQIERRPRAELAGGEPASRELAVGMQMRRAVRAGQALKTTDLAKPDL 264

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           + R   V +I     + ++T G AL   + GDV++V N+ +   V+G V   G V V
Sbjct: 265 VQRDQTVTLIYQTAGIYLTTRGKALEAGTDGDVVSVLNLQSKRTVTGRVTGRGQVSV 321


>gi|149911708|ref|ZP_01900316.1| flagella basal body P ring formation protein FlgA [Moritella sp.
           PE36]
 gi|149805238|gb|EDM65255.1| flagella basal body P ring formation protein FlgA [Moritella sp.
           PE36]
          Length = 233

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + L+V         V    VV +  ++ G +L ++  K   +    +R  Y   +  V  
Sbjct: 99  WQLHVPVKIIRLVPV----VVSNRPLSKGSLLTKNNTKIEYMNRVLLRSGYISDLTFVNR 154

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R L    +I    +    ++ +G  V +  + GN+T+ T G+AL++  +G+ I V+
Sbjct: 155 ARLKRQLSSGQMISTRDI---CLVCKGENVTLTSSVGNLTVKTDGMALANGILGEKIKVR 211

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +VSG V   G +++
Sbjct: 212 NSKSKRIVSGIVQAAGIIQI 231


>gi|197334457|ref|YP_002156706.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
           MJ11]
 gi|197315947|gb|ACH65394.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
           MJ11]
          Length = 211

 Score =  101 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     L   +    V     ++ G  ++ S L    V +   +     ++ D+VG
Sbjct: 77  WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 132

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +     +  + +    ++ R   V I   +G ++I T G AL D ++GD + VK
Sbjct: 133 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 189

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +V+G V   G + +
Sbjct: 190 NDKSNRIVNGIVTSVGEISI 209


>gi|149203124|ref|ZP_01880095.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. TM1035]
 gi|149143670|gb|EDM31706.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. TM1035]
          Length = 138

 Score =  101 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 5/141 (3%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             SL  +    L    +   ++ +  I   E+L  + L   Q  + +       +++D++
Sbjct: 1   MRSLAFMLGIFLSGPALADVILATRTIRPQEILGPADLLLQQGESHS-----DVALEDLI 55

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G   R  L P   +    +  P V+ R   V +I  +G + I T G +L  A IGD + V
Sbjct: 56  GQEARVALYPGRPVRQGDVGPPTVVERNQVVPLIYLRGGLEIMTEGRSLDRAGIGDHVRV 115

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
            N+ +   VSG V   G + V
Sbjct: 116 MNLASRATVSGRVTANGQILV 136


>gi|261211328|ref|ZP_05925616.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC341]
 gi|260839283|gb|EEX65909.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
           RC341]
          Length = 218

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + + V+G
Sbjct: 84  WRVYVPVRLTITIPLIT----AANPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPESVIG 139

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI         ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 140 AKIKKNIRIGDVI---DQKDVCIVCRNESVVIRAGKSGMSITTKGTAMSDGILGEQIKVK 196

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 197 NDKSNRIIDAQVSGVGEVTVA 217


>gi|58582190|ref|YP_201206.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|188576751|ref|YP_001913680.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188576942|ref|YP_001913871.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|58426784|gb|AAW75821.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521203|gb|ACD59148.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188521394|gb|ACD59339.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 214

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|166712067|ref|ZP_02243274.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 214

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|255264087|ref|ZP_05343429.1| flagella basal body P-ring formation protein FlgA [Thalassiobium
           sp. R2A62]
 gi|255106422|gb|EET49096.1| flagella basal body P-ring formation protein FlgA [Thalassiobium
           sp. R2A62]
          Length = 137

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +++SL  L A V    V+ S  I    ++  S +              A     VVG+  
Sbjct: 3   WLISLLFLAAPVSAETVLASRTIRPQTIIAPSDIVLHSANTEWA----ADHPDLVVGMEA 58

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           +  L     I +  +  P  + R   + I  + G +T+ T   +LS    GD I V N+ 
Sbjct: 59  KVALYAGRPIRVEDVGPPATVERNQIILITFSNGGLTMKTEARSLSRGGPGDRIRVMNLA 118

Query: 133 TGVMVSGSVVDTGTVRV 149
           +   +S  ++  GTV V
Sbjct: 119 SRATISARILTDGTVSV 135


>gi|160896083|ref|YP_001561665.1| SAF domain-containing protein [Delftia acidovorans SPH-1]
 gi|160361667|gb|ABX33280.1| SAF domain [Delftia acidovorans SPH-1]
          Length = 254

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C++  + +++++      +    G A V    + +G  L+     + +V  +      
Sbjct: 110 LRCLQGAVAWNVFLPITVKAW----GPAWVLQNGVPSGRPLSADDAVQAEVDWAEESAAV 165

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             + +D VGLV  R L     +  ++L  P + + GA+VR+++  G  +++++G A+S A
Sbjct: 166 YANQQDWVGLVASRPLAAGQALRQNMLRTPALFAVGAEVRVLVNGGGFSVTSSGKAMSAA 225

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             G  + V+ +D G ++SG V   G V V
Sbjct: 226 GEGQTVRVR-MDNGRLISGVVNPEGVVLV 253


>gi|224825773|ref|ZP_03698877.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
 gi|224601997|gb|EEG08176.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
          Length = 240

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           ++ ++ A +    +V +  ++AG+VL    ++  Q     +     HS  + VGL +R  
Sbjct: 107 TVYTVRAELDARQLVATRDLDAGKVLGADDVEWAQRPVYELEEG-LHSPAEAVGLSSRSA 165

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L     +   +L    ++ RG  V I+ ++  + ++  G +L      DVI V+N+ +G 
Sbjct: 166 LRRGQPLRRKLLEAVVLVRRGDAVEIVASKEAIVVTAPGESLESGRRNDVIRVRNVGSGK 225

Query: 136 MVSGSVVDTGTV 147
           ++   V + G V
Sbjct: 226 ILRARVTEAGRV 237


>gi|71280005|ref|YP_268215.1| putative flagellar basal-body P-ring formation protein FlgA
           [Colwellia psychrerythraea 34H]
 gi|71145745|gb|AAZ26218.1| putative flagellar basal-body P-ring formation protein FlgA
           [Colwellia psychrerythraea 34H]
          Length = 230

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           + +++ ++ S  V         +    ++    I+ G+ L+ES ++   +  + IRGN  
Sbjct: 92  ESIKWKIYLSAKV--------EITKAVLIAKNTISKGDKLDESNVELAFIAINKIRGNKL 143

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
                V G   ++ +     I    +    +I +G  V II++  N +I T G+ALS  +
Sbjct: 144 TDTNIVFGAKAKKRIAKGRAISKRSI---CLICKGDVVTIIVSSDNFSIKTQGVALSSGN 200

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147
           I + I VKN  +  +++  V     V
Sbjct: 201 INEQIRVKNTRSKKVITPRVKGINQV 226


>gi|325921019|ref|ZP_08182901.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           gardneri ATCC 19865]
 gi|325548501|gb|EGD19473.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           gardneri ATCC 19865]
          Length = 214

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSSNDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|260574400|ref|ZP_05842404.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
           SW2]
 gi|259023296|gb|EEW26588.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
           SW2]
          Length = 139

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 5/136 (3%)

Query: 15  LSLDSLFAS-VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           L+L  LF +     ++V +  I A  VL E+ +  +                  +GL  R
Sbjct: 4   LALILLFPTLAQADSLVATRTIRAQTVLAETDMTLVAADIP----GALTDTGAALGLEAR 59

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
             L     I    L  P ++ R   V +    G +TI T G A++   +GDVIAV N+D+
Sbjct: 60  TTLYAGRPIRPGDLGAPAIVERNQVVSLAYHAGPLTILTEGRAMARGGVGDVIAVMNLDS 119

Query: 134 GVMVSGSVVDTGTVRV 149
              VSG +   G V+V
Sbjct: 120 RTTVSGRIDAEGMVQV 135


>gi|209695768|ref|YP_002263698.1| flagellar basal body P-ring biosynthesis protein FlgA [Aliivibrio
           salmonicida LFI1238]
 gi|208009721|emb|CAQ80025.1| polar flagellar basal-body P-ring formation protein FlgA
           [Aliivibrio salmonicida LFI1238]
          Length = 248

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV     + A ++   V  +  ++ G  L+ + L    V +   R     +  D++G
Sbjct: 114 WKIYVP----VKAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGYINTNDLIG 169

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    V+  + +    ++ R   V I   +G ++I T G AL DA++GD + V+
Sbjct: 170 SRIKRSVRAGDVVEKNDI---CMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQ 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +  +++G V   G + +
Sbjct: 227 NNKSKRIINGVVTAVGEISI 246


>gi|238788311|ref|ZP_04632105.1| Flagella basal body P-ring formation protein flgA [Yersinia
           frederiksenii ATCC 33641]
 gi|238723557|gb|EEQ15203.1| Flagella basal body P-ring formation protein flgA [Yersinia
           frederiksenii ATCC 33641]
          Length = 226

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + +G  +    ++  Q     +            G V+ R +     +
Sbjct: 99  QVSGHYAVAARRLPSGAKITPEDIEMKQGRLDTLPPGALLEPHFAQGAVSLRQINAGQPL 158

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G  V+++       +++ G A+++ ++ D + V+ + +G +VSG+V 
Sbjct: 159 TRNMLRRLWVIKAGQDVQVLAQGEGFNVNSNGKAMNNGAVQDNVRVR-MASGQIVSGTVA 217

Query: 143 DTGTVRVVV 151
           + GT+R+++
Sbjct: 218 EDGTIRIML 226


>gi|325927870|ref|ZP_08189094.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           perforans 91-118]
 gi|325541710|gb|EGD13228.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           perforans 91-118]
          Length = 214

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RRVL
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRVL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|289666042|ref|ZP_06487623.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. vasculorum NCPPB702]
 gi|289670501|ref|ZP_06491576.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 214

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|163738059|ref|ZP_02145475.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
 gi|161388675|gb|EDQ13028.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
          Length = 138

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 +VP   I A E++    L   Q                V+G   R  L     +
Sbjct: 15  PAWADILVPVRTIRAKEIVTAEDLVLKQAEV----LGAISDPSLVIGQEARVALYAGRPM 70

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               +  P ++ R   V I   +G +TI   G +L   + G+ I V N+ +   +SG + 
Sbjct: 71  RPGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130

Query: 143 DTGTVRV 149
             GTV V
Sbjct: 131 ADGTVEV 137


>gi|121607565|ref|YP_995372.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2]
 gi|121552205|gb|ABM56354.1| SAF domain [Verminephrobacter eiseniae EF01-2]
          Length = 281

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + CV  +  +++++    + F    G A V +  +  G +L      E +V  +      
Sbjct: 136 LRCVAGVSAWNVFLPIAIAAF----GPAWVLTRNVAPGALLTAEDATEAEVDWAAEPAPV 191

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             +     G V  R L    V+  +++  P++   GA+V++ +      +  AG ALS  
Sbjct: 192 LANPALWQGQVAARPLRAGQVLRQTMVRAPWLFPAGAQVKVQVLGPGYAVVAAGQALSAG 251

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           + G ++ V+ +D G +VSG V   GT+
Sbjct: 252 ATGQMVRVR-MDNGRIVSGMVNAAGTI 277


>gi|293395579|ref|ZP_06639862.1| flagella basal body P-ring formation protein FlgA [Serratia
           odorifera DSM 4582]
 gi|291421898|gb|EFE95144.1| flagella basal body P-ring formation protein FlgA [Serratia
           odorifera DSM 4582]
          Length = 217

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+G  +V +  I+AG +L  + +         +        +  +G V+ R L P   +
Sbjct: 90  QVVGRYLVSARSISAGSILTAADVTLKTGRLDTLPPRMLVDSRRALGAVSLRNLGPGQPL 149

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            LS+L R +VI  G  V++       +IS AG A+++A+  D + V+ + +G +VSG   
Sbjct: 150 TLSMLRRAWVIKAGQPVQVTAQGEGFSISGAGKAMNNAAADDRVRVR-MSSGQIVSGIAG 208

Query: 143 DTGTVRVVV 151
           D G +RV +
Sbjct: 209 DDGAIRVTL 217


>gi|283478798|emb|CAY74714.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia pyrifoliae DSM 12163]
          Length = 223

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  ++ +  ++ GEV++ S ++        +         D  G +  R +   
Sbjct: 93  VQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAITAG 152

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + + ++ +P+ +  G  V +  +    TI++ G A+++A+    + V+ +++G +V+G
Sbjct: 153 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVTG 211

Query: 140 SVVDTGTVRVVV 151
            +   G + + +
Sbjct: 212 KIDADGNILISL 223


>gi|259908816|ref|YP_002649172.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Erwinia pyrifoliae Ep1/96]
 gi|224964438|emb|CAX55947.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Erwinia pyrifoliae Ep1/96]
          Length = 222

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  ++ +  ++ GEV++ S ++        +         D  G +  R +   
Sbjct: 92  VQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAITAG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + + ++ +P+ +  G  V +  +    TI++ G A+++A+    + V+ +++G +V+G
Sbjct: 152 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210

Query: 140 SVVDTGTVRVVV 151
            +   G + + +
Sbjct: 211 KIDADGNILISL 222


>gi|325918872|ref|ZP_08180949.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325534909|gb|EGD06828.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 214

 Score =  100 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I+AGE ++ + +   +   + I G         VG   RRVL
Sbjct: 80  FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKSARRVL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +  +G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|255747098|ref|ZP_05421043.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera
           CIRS 101]
 gi|262161358|ref|ZP_06030468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           INDRE 91/1]
 gi|262167771|ref|ZP_06035473.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC27]
 gi|262191695|ref|ZP_06049871.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           CT 5369-93]
 gi|255735500|gb|EET90900.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera
           CIRS 101]
 gi|262023836|gb|EEY42535.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           RC27]
 gi|262028669|gb|EEY47323.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           INDRE 91/1]
 gi|262032434|gb|EEY50996.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           CT 5369-93]
 gi|327484722|gb|AEA79129.1| Flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
           LMA3894-4]
          Length = 201

 Score =  100 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV    ++   +I      +  ++ G++++   +    V     R     + ++V+G
Sbjct: 67  WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 122

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              ++ +    VI  + +    ++ R   V I   +  M+I+T G A+SD  +G+ I VK
Sbjct: 123 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 179

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  ++   V   G V V 
Sbjct: 180 NDKSNRIIDAQVSGVGEVTVA 200


>gi|33573139|emb|CAE36786.1| flagella basal body P-ring formation protein [Bordetella
           parapertussis]
          Length = 291

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y  +  S    V G   V +  I  G+ +  + L         +          ++G
Sbjct: 155 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 210

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     I  + L     +SRG  VRI        +S+ G AL +A     + V+
Sbjct: 211 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPSATVQVR 270

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V   G V + +
Sbjct: 271 -TASGQVVSGIVQAAGLVEIQL 291


>gi|77748624|ref|NP_642314.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 214

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L        +V    I AGE ++ + +   +   + I G         VG   RR+L
Sbjct: 80  FVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    ++ RG  V ++   G + +   G ALSDA   + ++V+N  +  +
Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVSVENSSSRRV 199

Query: 137 VSGSVVDTGTVRV 149
           V G V  +GTV V
Sbjct: 200 VQGIVEASGTVVV 212


>gi|34496454|ref|NP_900669.1| flagella basal body P-ring formation protein flgA [Chromobacterium
           violaceum ATCC 12472]
 gi|34102307|gb|AAQ58673.1| probable flagella basal body P-ring formation protein flgA
           [Chromobacterium violaceum ATCC 12472]
          Length = 221

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SL +    +         VV +  + AGE ++   ++ + ++N  + GN        VG
Sbjct: 85  WSLRIPVRINEK----RLGVVLNRAMMAGETISGGDVRLVDISNPALAGNVLTDASQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V R        +   ++  PY++    +V++       +    G AL +A+ GD I+V+
Sbjct: 141 QVLRSGAPAGAWVRNFMVRAPYLVRSNQRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR 200

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
            + TG +V G V   G+V VV
Sbjct: 201 -LSTGRVVLGVVQADGSVAVV 220


>gi|149191168|ref|ZP_01869426.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
           AK1]
 gi|148835006|gb|EDL51985.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
           AK1]
          Length = 235

 Score =  100 bits (249), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+   S  SL       AV     +  G+ L+ S +    +     +  +     +VVG
Sbjct: 100 WSISATSSASL----TIWAVTADKALRKGQRLSPSDIAIKPIKLYTDKKVFFK-PSEVVG 154

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    ++  S L+  Y + +G  V ++     + + T G AL    +GD ++V+
Sbjct: 155 SKLKRSVKKGELLTTSRLYLDYDVEKGQAVDVVYQSETIRLETLGTALESGLVGDTVSVQ 214

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +G ++ G V     VRV
Sbjct: 215 NQQSGKLLRGVVTKKNQVRV 234


>gi|148266115|ref|YP_001232821.1| SAF domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146399615|gb|ABQ28248.1| SAF domain protein [Geobacter uraniireducens Rf4]
          Length = 238

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 59/132 (44%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +    +   VV    +  GEV+    +   +   + ++G    + ++ VG   R  + 
Sbjct: 105 VKVEVEALADVVVAVRPLERGEVIGNGDIAVQKRDLAKMQGKTCRTAEEAVGKRVRTAIR 164

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
            ++ I    L +  ++  G  V I++    + I+ AG A +  + GD + V+N+ +   V
Sbjct: 165 GNNPIRADYLEKISLVKSGQLVTIVVENDALRITAAGRARNSGAEGDTVMVQNLASQKEV 224

Query: 138 SGSVVDTGTVRV 149
           +  VVD  TV+V
Sbjct: 225 AARVVDATTVKV 236


>gi|115523555|ref|YP_780466.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisA53]
 gi|115517502|gb|ABJ05486.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53]
          Length = 352

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             +   EV+  S +   +   + + G+       V+G+  RR L     +  + L +P +
Sbjct: 208 RGLERNEVVKASDVVLERRPKAEVGGDVL-GRDGVIGMQARRSLRAGQPLRGADLGKPDL 266

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           + R   V +      + ++  G A+ + + GDV+ V N+ +   VSG V+  G V +  
Sbjct: 267 VQRDQGVTLTYETTGIYLTVRGKAMENGAEGDVVNVVNLQSKRTVSGIVIGRGQVSISA 325


>gi|163742545|ref|ZP_02149931.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter
           gallaeciensis 2.10]
 gi|161384130|gb|EDQ08513.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter
           gallaeciensis 2.10]
          Length = 138

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 +VP   I A E++    L   Q                V+G   R  L     +
Sbjct: 15  PAWADILVPVRTIRAKEIVTAEDLVLKQAEV----LGAISDPSLVIGQEARVALYAGRPM 70

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               +  P ++ R   V I   +G +TI   G +L   + G+ I V N+ +   +SG + 
Sbjct: 71  RHGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130

Query: 143 DTGTVRV 149
             GTV V
Sbjct: 131 ADGTVEV 137


>gi|172061976|ref|YP_001809628.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           ambifaria MC40-6]
 gi|171994493|gb|ACB65412.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ambifaria MC40-6]
          Length = 418

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +           VG
Sbjct: 282 WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 337

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  I V+
Sbjct: 338 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 397

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 398 -MAAGQIVTAIVKDAGTVEI 416


>gi|163782719|ref|ZP_02177715.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881840|gb|EDP75348.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
          Length = 211

 Score =   99 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 58/119 (48%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V    +  GE +   ++   ++           S ++++  V  R +    V+  S L 
Sbjct: 90  IVAQEDLLKGERVYPWQVAYEEMFMGRCPRQDIESTEELINYVALRTVKRGEVLVKSYLK 149

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +  ++ RG +V +I   GN+ IS +G AL     GDVI V++ +TG ++ G V+  G+V
Sbjct: 150 KEPLVRRGQEVSVIYRSGNLEISFSGKALDTGFYGDVIRVRSFNTGKVLRGRVISEGSV 208


>gi|84502380|ref|ZP_01000516.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           batsensis HTCC2597]
 gi|84389192|gb|EAQ01989.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           batsensis HTCC2597]
          Length = 222

 Score =   99 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 55/129 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       VP   +  GE + E  L  +++  + I         D+VG+  +R+L     
Sbjct: 93  AIATLDVPVPVARMLPGERIGEEDLGAVKLPLARIGAFTVTDPADLVGMQVKRLLTQGRP 152

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    + +P +I RG ++ I    G + +S  G AL  A  G  I + N+ +   ++G  
Sbjct: 153 VMTQSVIKPLIIDRGDRISIRYDDGLLALSAPGKALDAAHKGQEIRIVNLASNTSLTGVA 212

Query: 142 VDTGTVRVV 150
           V  G V V 
Sbjct: 213 VGRGIVEVT 221


>gi|77918759|ref|YP_356574.1| flagellar basal body P-ring biosynthesis protein [Pelobacter
           carbinolicus DSM 2380]
 gi|77544842|gb|ABA88404.1| flagellar basal body P-ring biosynthesis protein [Pelobacter
           carbinolicus DSM 2380]
          Length = 240

 Score =   99 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 1/117 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G +L    L  + +  + +R       + +VG   RR +        + L  P +I 
Sbjct: 125 LPRGTILQAEDLSMVTMDLAGLRAPCL-DAQQMVGKKLRRPVRMGAPFTQTGLETPPLIK 183

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           RG  V I  + G +T++T G+A       + I VKNI +   +   V     V V +
Sbjct: 184 RGDMVTITASVGALTVTTRGLAQESGIADETIRVKNIRSKKEIFCRVTAPSAVEVEL 240


>gi|34497155|ref|NP_901370.1| flagella basal body P-ring formation protein flgA [Chromobacterium
           violaceum ATCC 12472]
 gi|34103012|gb|AAQ59375.1| probable flagella basal body P-ring formation protein flgA
           [Chromobacterium violaceum ATCC 12472]
          Length = 236

 Score =   99 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           + AG  L    +   +    +   +         GL +R  L  D  +    L  P  + 
Sbjct: 121 LPAGVALAPQDVAWARRPVGD-PADLFGQASPPQGLASRTPLRQDQPLRRRQLQPPQWVK 179

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           RG  V I+  Q  + +++AG AL++   G+VI V+N  +  +++  V   G V
Sbjct: 180 RGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEV 232


>gi|238782788|ref|ZP_04626817.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           bercovieri ATCC 43970]
 gi|238716211|gb|EEQ08194.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           bercovieri ATCC 43970]
          Length = 236

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
           PS  +  G  +    L+    + + +      + + ++GL T R +     +  + L +P
Sbjct: 115 PSHPLKPGVTIQPEDLESRTGSLARLPEGVVFNKEHIIGLTTTRSINRGQPVLQNQLRQP 174

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            VI  G +V +I T     I + G AL +A++G  + +    TG +++G+V   G V + 
Sbjct: 175 RVIMTGQEVEMIATGPGFRIRSRGKALDNAALGGTLRII-TKTGQIMTGTVTAEGKVNID 233

Query: 151 VK 152
           +K
Sbjct: 234 LK 235


>gi|89068732|ref|ZP_01156118.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
 gi|89045695|gb|EAR51757.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
          Length = 218

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       VP   I   E++ E+ L  +++    +       ++ +VG+  RRVL     
Sbjct: 89  ALATVPVPVPVRRILPDEIIAEADLDVVRLPMGRVGAFAVVDLEALVGMQVRRVLSQGRP 148

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P VI RG  V I  + G + ++  G A++ A  G  + V N+ +  +V+G  
Sbjct: 149 VMSQSVIEPLVIERGDAVSIRYSDGALELTAPGRAMAGAHRGQDVRVVNLASNRLVTGIA 208

Query: 142 VDTGTVRVV 150
              G V V+
Sbjct: 209 ARDGIVEVL 217


>gi|144897833|emb|CAM74697.1| Distal basal body ring component protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 317

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 58/126 (46%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +    V +  +N G+++ E+ +K +++     R +    +  ++G   R+ +  D  +  
Sbjct: 183 VAKVPVLARPLNRGDIITEADIKWVELRADVARRDIIIDVDQIIGQEPRQPVRADAPLRA 242

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L RP ++ R A V + L   NM++++   A      GDVI + N+ +   V   V   
Sbjct: 243 SELRRPVLVERNAMVTVTLKTANMSLTSQAKATEAGGKGDVIRITNLQSKRTVEAVVEGP 302

Query: 145 GTVRVV 150
           G V V 
Sbjct: 303 GLVSVT 308


>gi|310764864|gb|ADP09814.1| Flagella basal body P-ring formation protein FlgA [Erwinia sp.
           Ejp617]
          Length = 234

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V    + AG +L    ++    +  +        I  +VG  T R L     I  + L +
Sbjct: 112 VAKKNLPAGSILRAEDIESHTGSLDHQPAGILFDINQIVGQTTTRALNVGSPIVQNQLRQ 171

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +++  G  V II       I + G AL++AS+ D++ V+   TG  +SG V   G V +
Sbjct: 172 QWLLHAGQMVDIITQGDGFRIRSQGKALANASVDDMLKVQ-TRTGRTISGKVAHDGQVEI 230

Query: 150 VVK 152
           +++
Sbjct: 231 LLQ 233


>gi|238764388|ref|ZP_04625338.1| Flagella basal body P-ring formation protein flgA [Yersinia
           kristensenii ATCC 33638]
 gi|238697414|gb|EEP90181.1| Flagella basal body P-ring formation protein flgA [Yersinia
           kristensenii ATCC 33638]
          Length = 233

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V +  + AG  +    ++  Q     +            G V+ R +     +
Sbjct: 106 QVSGQYAVAARQLTAGAKITPQDIEMKQGRLDTLPPGALLEPSFAQGAVSLRQINAGQPL 165

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +V+  G  V+++       ++ +G A+++A++ D + V+ + +G +VSG+V 
Sbjct: 166 TRNMLRRLWVVKAGQYVQVLAQGDGFNVNGSGKAMNNAAVQDNVRVR-MASGQIVSGTVS 224

Query: 143 DTGTVRVVV 151
           D G +++++
Sbjct: 225 DDGIIKIIL 233


>gi|292487935|ref|YP_003530810.1| flagella basal body P-ring formation protein FlgA [Erwinia
           amylovora CFBP1430]
 gi|292899154|ref|YP_003538523.1| flagella basal body P-ring formation protein [Erwinia amylovora
           ATCC 49946]
 gi|291199002|emb|CBJ46113.1| flagella basal body P-ring formation protein [Erwinia amylovora
           ATCC 49946]
 gi|291553357|emb|CBA20402.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia amylovora CFBP1430]
          Length = 222

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V +  ++ GE ++ S ++        +      +  D  G +  R ++P 
Sbjct: 92  VQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIMPG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + + ++ +P+ +  G  V +  +    TI + G A+++A+    + V+ +++G +V+G
Sbjct: 152 QPVTMMMMRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210

Query: 140 SVVDTGTVRVVV 151
            +   G + + +
Sbjct: 211 KIDADGNILISL 222


>gi|312172056|emb|CBX80313.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia amylovora ATCC BAA-2158]
          Length = 222

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V +  ++ GE ++ S ++        +      +  D  G +  R ++P 
Sbjct: 92  VQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIMPG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + + ++ +P+ +  G  V +  +    TI + G A+++A+    + V+ +++G +V+G
Sbjct: 152 QPVTMMMIRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210

Query: 140 SVVDTGTVRVVV 151
            +   G + + +
Sbjct: 211 KIDADGNILISL 222


>gi|33592475|ref|NP_880119.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           pertussis Tohama I]
 gi|33572121|emb|CAE41663.1| flagella basal body P-ring formation protein [Bordetella pertussis
           Tohama I]
 gi|332381892|gb|AEE66739.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           pertussis CS]
          Length = 236

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y  +  S    V G   V +  I  G+ +  + L         +          ++G
Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     I  + L     +SRG  VRI        +S+ G AL +A  G  + V+
Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPGATVQVR 215

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V   G V + +
Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236


>gi|33601537|ref|NP_889097.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           bronchiseptica RB50]
 gi|33575973|emb|CAE33052.1| flagella basal body P-ring formation protein [Bordetella
           bronchiseptica RB50]
          Length = 236

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y  +  S    V G   V +  I  G+ +  + L         +          ++G
Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     I  + L     +SRG  VRI        +S+ G AL +A  G  + V+
Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPGATVQVR 215

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V   G V + +
Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236


>gi|238793994|ref|ZP_04637612.1| Flagella basal body P-ring formation protein flgA [Yersinia
           intermedia ATCC 29909]
 gi|238726626|gb|EEQ18162.1| Flagella basal body P-ring formation protein flgA [Yersinia
           intermedia ATCC 29909]
          Length = 226

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V    +  GE +  S ++  Q     +            G V+ R +     +
Sbjct: 99  QVSGHYAVAGRQLAVGEKIAASDIQMKQGRLDTLPPGALLEPHFAQGAVSLRRINAGQPL 158

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G +V+++       +++ G A+++A+I D + V+ + +G +VSG+V 
Sbjct: 159 TRNMLRRLWVIKAGQEVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVG 217

Query: 143 DTGTVRVVV 151
           + GT+R+++
Sbjct: 218 EDGTIRIML 226


>gi|332284015|ref|YP_004415926.1| flagella basal body P-ring formation protein [Pusillimonas sp.
           T7-7]
 gi|330427968|gb|AEC19302.1| flagella basal body P-ring formation protein [Pusillimonas sp.
           T7-7]
          Length = 236

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S+ G+  V +  I  GEV++   +   +     +  N        VG +  + +     I
Sbjct: 109 SIQGYYYVANRNIEVGEVVSLDDMAAREGDILRLANNIIFDPSQAVGYIASQRIRAGGPI 168

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S L  P  I RG  VR          +  G AL + + G  I V+   +G ++SG VV
Sbjct: 169 KSSALRDPDSIQRGQMVRTEARGAGFVATGEGQALQNGAPGAQIQVR-ASSGQVISGVVV 227

Query: 143 DTGTVRVVV 151
           +  TVR+V+
Sbjct: 228 NAHTVRIVM 236


>gi|238758114|ref|ZP_04619294.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
           ATCC 35236]
 gi|238703652|gb|EEP96189.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
           ATCC 35236]
          Length = 226

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V +  + AGE ++   ++  Q     +            G V+ R +     +
Sbjct: 99  QVSGRYAVATRRLAAGEKISMPDIEMKQGRLDTLPPGALLDTHFAQGAVSLRQINAGQPL 158

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G  V+I+       I++ G A+++A++ D + V+ + +G +VSG+V 
Sbjct: 159 TRNMLRRLWVIKAGQDVQILAQGEGFNINSTGKAMNNAAVQDSVRVR-MASGQIVSGTVA 217

Query: 143 DTGTVRVVV 151
           D GT+++++
Sbjct: 218 DNGTIQIML 226


>gi|37525837|ref|NP_929181.1| flagella basal body P-ring formation protein FlgA precursor
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785266|emb|CAE14207.1| Flagella basal body P-ring formation protein FlgA precursor
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 219

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +  SV G+ +V    I+  +VL++   +  +     +  +   +  ++   +  R +
Sbjct: 86  FIQVAVSVTGNYLVTRRAISRNDVLSDKDFQVRRGLLERLPHDLVINKNEIKNSIAIRNI 145

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                I  ++L RP+V+  G  V +I+      I   G A+++A+I D + V+ I++G +
Sbjct: 146 PAGQAITHNMLRRPWVVRSGQSVAVIIQGNGFQIRNEGKAINNAAISDKVRVR-INSGHV 204

Query: 137 VSGSVVDTGTVRVVV 151
           ++G  ++ G V++++
Sbjct: 205 ITGQALENGNVKIML 219


>gi|310767286|gb|ADP12236.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Erwinia sp. Ejp617]
          Length = 222

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V +  ++ GEV++ S ++        +         +  G +  R +   
Sbjct: 92  VQLQVTGSYLVATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADNATGAIALRAITAG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + + ++ +P+ +  G  V +  +    TI++ G A+++A+    + V+ +++G +V+G
Sbjct: 152 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVNG 210

Query: 140 SVVDTGTVRVVV 151
            +   G + + +
Sbjct: 211 KIDADGNILISL 222


>gi|88704310|ref|ZP_01102024.1| flagella basal body P-ring formation protein FlgA [Congregibacter
           litoralis KT71]
 gi|88701361|gb|EAQ98466.1| flagella basal body P-ring formation protein FlgA [Congregibacter
           litoralis KT71]
          Length = 252

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LY+ +  S    +     V    +  G +L    L+ +    +    +         G
Sbjct: 116 WTLYLRAEVSASLDLP----VLKKALPRGSILGADDLEIVTRRVTAQVADVILEPAAAEG 171

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  +R L     +    +  P ++SRG  V +I   G + +   G A+   + GD + V 
Sbjct: 172 MELKRPLPAGSTLRHGHVDLPELVSRGQMVTLIAGGGGVEVRMQGKAMGSGAQGDRLLVT 231

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +G  V G ++  G++R+
Sbjct: 232 NLTSGRRVEGLILPDGSIRI 251


>gi|186477693|ref|YP_001859163.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           phymatum STM815]
 gi|184194152|gb|ACC72117.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           phymatum STM815]
          Length = 424

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LY+ +  S+ A+      V +  I  GE+L+ S L       + +          VVG
Sbjct: 288 WTLYLQAKVSIHAT----YFVAARSIAPGELLSSSDLVARDGDLTVLPQAVITDASQVVG 343

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    + P   +   +L     +S G  V+++       IS  G A+++AS G  + V+
Sbjct: 344 SVALMRVSPGLPLRRDMLKSAEAVSIGQSVKVVAQGPGFAISAEGSAMNNASPGQPVKVR 403

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++ G V D GTV + +
Sbjct: 404 -TANGQIIQGVVKDAGTVEIQL 424


>gi|149189832|ref|ZP_01868112.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
 gi|148836318|gb|EDL53275.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
           AK1]
          Length = 240

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
              V S  +N    +  + ++    T +    ++   +  ++G    R +    +I  S 
Sbjct: 117 PVAVASQTLNRDTQITAASVQLETRTLNRA-VHFVADLSQIIGNQVSRRMRTGQIIDASF 175

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           + +P ++ +G +V II  +G    ST GIAL     G+ I V+N  +  ++   V     
Sbjct: 176 VVKPPLVEKGNEVVIIAAKGKFNASTKGIALETGGAGEQIEVQNSQSKKVIRAVVTGLNQ 235

Query: 147 VRV 149
           V  
Sbjct: 236 VHT 238


>gi|300716214|ref|YP_003741017.1| flagellar biosynthesis, assembly of basal-body periplasmic P ring
           [Erwinia billingiae Eb661]
 gi|299062050|emb|CAX59166.1| Flagellar biosynthesis, assembly of basal-body periplasmic P ring
           [Erwinia billingiae Eb661]
          Length = 222

 Score = 99.5 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V +  +  G  L    +K  +     +      S ++V   V  R ++P 
Sbjct: 92  VQVQVTGDYLVAARQVIRGGTLTADDVKIQRGRLDTLPARTVMSAEEVTDAVALRDIIPG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +   ++ +P+ +  G  V +    G  +IS+ G A+++A+   ++ V+ + +G +VSG
Sbjct: 152 QPLTQMMVRQPWRVKAGQNVTVTANGGGFSISSEGRAMNNATTAQLVRVR-MSSGQIVSG 210

Query: 140 SVVDTGTVRVVV 151
            V   G + + +
Sbjct: 211 KVGADGIILITL 222


>gi|77464903|ref|YP_354407.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
 gi|332559801|ref|ZP_08414123.1| FlgA2 [Rhodobacter sphaeroides WS8N]
 gi|77389321|gb|ABA80506.1| putative flagellar basal-body P-ring formation protein FlgA
           [Rhodobacter sphaeroides 2.4.1]
 gi|332277513|gb|EGJ22828.1| FlgA2 [Rhodobacter sphaeroides WS8N]
          Length = 139

 Score = 99.2 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 VV +  + A  +L    L                 +   +G   R  L     +
Sbjct: 13  PASAETVVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPV 68

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             + L  P +I R   V +    G + I   G ALS   +GD I V N+ +   VSG + 
Sbjct: 69  RAADLGPPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIA 128

Query: 143 DTGTVRV 149
           + G V V
Sbjct: 129 EDGAVHV 135


>gi|254251187|ref|ZP_04944505.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia
           dolosa AUO158]
 gi|124893796|gb|EAY67676.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia
           dolosa AUO158]
          Length = 370

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L+ + L       + +           VG
Sbjct: 234 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTTLPVAVITDPAQAVG 289

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 290 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGAGFTISAEGSALANAAPGQSVRVR 349

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 350 -MSAGQIVTAIVKDAGTVEI 368


>gi|221199735|ref|ZP_03572778.1| flageller protein FlgA [Burkholderia multivorans CGD2M]
 gi|221208660|ref|ZP_03581660.1| flageller protein FlgA [Burkholderia multivorans CGD2]
 gi|221171471|gb|EEE03918.1| flageller protein FlgA [Burkholderia multivorans CGD2]
 gi|221179974|gb|EEE12378.1| flageller protein FlgA [Burkholderia multivorans CGD2M]
          Length = 388

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  ++ A+      V +  I  GE L+ + L       + +           +G
Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386


>gi|209522282|ref|ZP_03270910.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           H160]
 gi|209497276|gb|EDZ97503.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           H160]
          Length = 342

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  S+ A+      + +  +  GEVL  + L       + +           VG
Sbjct: 206 WTIYLQARISVHAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 261

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V+   L     +   +L     ++ G  VR++      +IS+ G A+++AS G  + VK
Sbjct: 262 SVSLVRLAGGMPLRRDMLKSAAAVAFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 321

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G +VSG V D GTV + +
Sbjct: 322 -TANGQIVSGIVKDGGTVEIQM 342


>gi|114562336|ref|YP_749849.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
           frigidimarina NCIMB 400]
 gi|114333629|gb|ABI71011.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Shewanella frigidimarina NCIMB 400]
          Length = 235

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + ++ S+ V     +        VV + +++  +++ E  L+ M V   +++G +   I 
Sbjct: 101 WQMYLSVRVEIQYPV--------VVANQLLSPDQIIGEHHLQVMYVDQYSLKGQFFSDIT 152

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            ++G   +R +  D  +  + L     + +G  V I     N+ I T G AL D +I +V
Sbjct: 153 TLIGSRVKRRVAKDSPVLSNNL---CFVCKGDTVSIYAKTTNVEIKTLGEALRDGNIDEV 209

Query: 126 IAVKNIDTGVMVSG 139
           I VKN +T      
Sbjct: 210 IRVKNSNTSKQFDA 223


>gi|157371211|ref|YP_001479200.1| SAF domain-containing protein [Serratia proteamaculans 568]
 gi|157322975|gb|ABV42072.1| SAF domain protein [Serratia proteamaculans 568]
          Length = 217

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G  +V +  I+AG  L  + +K        +           +G V+ R + P   +
Sbjct: 90  QVTGKYLVSARGISAGSKLTAADIKLKTGRLDTLPPRTLTEAGKALGAVSLRNISPGQPL 149

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            L++L R + +  G  V++        IS +G A+++A+  D + V+ + +G +V+G V 
Sbjct: 150 NLAMLRRAWAVKAGQAVQVTAQGDGFNISGSGKAMNNAATEDSVRVR-MASGQIVNGIVG 208

Query: 143 DTGTVRVVV 151
           D G +R+ +
Sbjct: 209 DDGAIRITL 217


>gi|238755328|ref|ZP_04616671.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
           ATCC 29473]
 gi|238706464|gb|EEP98838.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
           ATCC 29473]
 gi|253317691|gb|ACT22780.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           ruckeri]
          Length = 219

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G  +V +  + AGE L E  +   +     +        +   G +  R +     +
Sbjct: 92  QVSGKYLVATRQLAAGEKLTEKEMTYKEGRLDTLPPGALLDARFAKGTLALRHINAGQPL 151

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +V+  G  V+++       +++ G A+++A++ D + V+ + +G +VSG+V 
Sbjct: 152 TRTMLRRSWVVKAGQAVQVVAEGEGFNVNSEGKAMNNAALQDNVRVR-MVSGQIVSGTVG 210

Query: 143 DTGTVRVVV 151
           D G +R+++
Sbjct: 211 DDGVIRIML 219


>gi|259907630|ref|YP_002647986.1| Flagella basal body P-ring formation protein FlgA [Erwinia
           pyrifoliae Ep1/96]
 gi|224963252|emb|CAX54736.1| Flagella basal body P-ring formation protein FlgA [Erwinia
           pyrifoliae Ep1/96]
 gi|283477472|emb|CAY73388.1| Flagella basal body P-ring formation protein flgA precursor
           [Erwinia pyrifoliae DSM 12163]
          Length = 234

 Score = 99.2 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V    +  G V+    ++    +  +        I  +VG  T R L     I  + L +
Sbjct: 112 VAKKNLPVGSVIRAEDIESHTGSLDHQPAGILFDINQIVGQTTTRALNVGSPIVQNQLRQ 171

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +++  G  V II       I + G AL++AS+ D++ V+   TG  +SG V   G V +
Sbjct: 172 QWLLHAGQMVDIITQGDGFRIRSQGKALANASVDDMLKVQ-TRTGRTISGKVAHDGQVEI 230

Query: 150 VVK 152
           +++
Sbjct: 231 LLQ 233


>gi|189426329|ref|YP_001953506.1| flagella basal body P-ring formation protein FlgA [Geobacter
           lovleyi SZ]
 gi|189422588|gb|ACD96986.1| flagella basal body P-ring formation protein FlgA [Geobacter
           lovleyi SZ]
          Length = 243

 Score = 98.8 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 54/121 (44%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V  S  + AG VL E+ L+  +   +   G    +I D VG   R  +     I  + L 
Sbjct: 121 VTASRQLLAGTVLTEADLQLQKQDLAQAGGLPVKNITDAVGKKLRITVRAGTPIRSNQLV 180

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              V+  G  V II     + I+ +G A S   +G++I V+N+ +   +   VVD  TV 
Sbjct: 181 SVPVVVSGQLVTIIAENAGVRITVSGRARSAGGVGELIRVQNLVSNKEIPARVVDASTVE 240

Query: 149 V 149
           V
Sbjct: 241 V 241


>gi|161526190|ref|YP_001581202.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           multivorans ATCC 17616]
 gi|189349094|ref|YP_001944722.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           multivorans ATCC 17616]
 gi|160343619|gb|ABX16705.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           multivorans ATCC 17616]
 gi|189333116|dbj|BAG42186.1| flagella basal body P-ring formation protein [Burkholderia
           multivorans ATCC 17616]
          Length = 388

 Score = 98.8 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  ++ A+      V +  I  GE L+ + L       + +           +G
Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386


>gi|119947160|ref|YP_944840.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Psychromonas ingrahamii 37]
 gi|119865764|gb|ABM05241.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Psychromonas ingrahamii 37]
          Length = 234

 Score = 98.8 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S+ +++  + + +V   A      +  G  L    +   +    N   +Y  ++  + G
Sbjct: 98  WSVNIVANINYYMAVATTA----SSLPRGHSLQPEDIVFREQRIRN--NDYYPNVAGLAG 151

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T+R L    +I    +   Y + R ++V II  Q + ++ST GIAL    +GD+I VK
Sbjct: 152 KKTKRKLRAGSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVK 211

Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152
           N  +G +++ +V+    V V  K
Sbjct: 212 NKRSGNIITTTVIGKNKVSVESK 234


>gi|221215567|ref|ZP_03588530.1| flageller protein FlgA [Burkholderia multivorans CGD1]
 gi|221164555|gb|EED97038.1| flageller protein FlgA [Burkholderia multivorans CGD1]
          Length = 388

 Score = 98.8 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  ++ A+      V +  I  GE L+ + L       + +           +G
Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386


>gi|295678062|ref|YP_003606586.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1002]
 gi|295437905|gb|ADG17075.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1002]
          Length = 493

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + +  +  GEVL  + L   +   + +           VG
Sbjct: 357 WTIYLQARISLHAT----YYLAARAMAPGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 412

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V+   +     +   +L     +  G  VR++      +IS+ G A+++AS G  + VK
Sbjct: 413 SVSLVRISGGMPLRRDMLKSASAVVFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 472

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D GTV + +
Sbjct: 473 -TANGQIISGIVKDGGTVEIQM 493


>gi|260886212|ref|ZP_05897475.1| putative flagella basal body P-ring formation protein FlgA
           [Selenomonas sputigena ATCC 35185]
 gi|330839792|ref|YP_004414372.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           sputigena ATCC 35185]
 gi|260863931|gb|EEX78431.1| putative flagella basal body P-ring formation protein FlgA
           [Selenomonas sputigena ATCC 35185]
 gi|329747556|gb|AEC00913.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           sputigena ATCC 35185]
          Length = 244

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 61/126 (48%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V    +V S  +   + L+E+ ++  +   + +RG       +V+G V  R++    V+ 
Sbjct: 117 VYDTVLVASRNLFPEQALSEADMRFEEREVTRVRGRCLKDKGEVLGHVVSRMVQEGAVLS 176

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
             +L +P V+  GA V I+     + +  +G+AL+   +G  I V+N  +  ++   V+D
Sbjct: 177 EDLLRQPVVMESGAAVTIVSRYNGIEVRVSGVALTRGRVGQKIRVRNAASRKVMLARVLD 236

Query: 144 TGTVRV 149
             TV +
Sbjct: 237 ASTVEI 242


>gi|293604999|ref|ZP_06687395.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           piechaudii ATCC 43553]
 gi|292816604|gb|EFF75689.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           piechaudii ATCC 43553]
          Length = 238

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++ YV +  S    V G+  V S +I+AG+ L    L        ++        + VVG
Sbjct: 102 WTTYVQATVS----VPGYYYVASRMISAGQALTPDDLAPRDGDLVSLPPGAITDPQAVVG 157

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     +  S L     + RGA VRI        +S+ G AL +A+ G V+ V+
Sbjct: 158 MSAAFRINAGQPVRSSSLRNAQSVMRGANVRINARGNGFVVSSEGQALDNAAPGAVVQVR 217

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V + G V + +
Sbjct: 218 -TASGQVVSGVVRNAGLVEIQL 238


>gi|218507130|ref|ZP_03505008.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli Brasil 5]
          Length = 109

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/109 (39%), Positives = 72/109 (66%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             ++  + + +   + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V 
Sbjct: 1   MIAVAGIVVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVE 60

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           GLV++R LLP   I +S L  PY ++RG+ +R++ + G MTIS AG  L
Sbjct: 61  GLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPL 109


>gi|254524107|ref|ZP_05136162.1| flagellar protein [Stenotrophomonas sp. SKA14]
 gi|219721698|gb|EED40223.1| flagellar protein [Stenotrophomonas sp. SKA14]
          Length = 218

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 58/134 (43%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +        +V +  I  GE +  + +   Q   + I G         +G + RR L
Sbjct: 84  FVPVKVRRNQSVLVLNRGIGTGETITAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    +I RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +
Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203

Query: 137 VSGSVVDTGTVRVV 150
           V G+V   G V V 
Sbjct: 204 VQGTVDAAGDVIVA 217


>gi|90408053|ref|ZP_01216224.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
           CNPT3]
 gi|90310810|gb|EAS38924.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
           CNPT3]
          Length = 230

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S YV     + +  +   ++ +  +  GE LN + +K   +T S +RG      K ++G
Sbjct: 96  WSTYV----RVRSHRLFRTIISAQALRKGETLNNNNIKVTYLTKSQLRGGSFSQKKILIG 151

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R +    +I    +     + +  +V I   +  + I T+GIAL++A+IG+ + VK
Sbjct: 152 SRLKRNMGAQKIIKNRDV---CFVCQKDQVIISAIKAGLVIKTSGIALNNANIGESVRVK 208

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
           N  +  +V G+V     V+V 
Sbjct: 209 NSRSQRIVVGTVSAQKEVQVT 229


>gi|188534174|ref|YP_001907971.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Erwinia tasmaniensis Et1/99]
 gi|188029216|emb|CAO97088.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Erwinia tasmaniensis Et1/99]
          Length = 222

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  VV +  I+ GE ++ S ++  Q     +         + +G VT R + P 
Sbjct: 92  VQVQVTGSYVVATRQISQGEAISASDVRMEQGRLDTLPARTLMQPGEAIGAVTLRDITPG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L ++ + + +  G  V +  +    +IS+ G A+++A+    + V+ +++G +V G
Sbjct: 152 QPMTLMMMRQAWRVKAGQTVIVYASGDGFSISSEGKAMNNAAALQSVRVR-MNSGQIVMG 210

Query: 140 SVVDTGTVRVVV 151
            V   G V + +
Sbjct: 211 QVGSDGNVLISL 222


>gi|92114102|ref|YP_574030.1| flageller protein FlgA [Chromohalobacter salexigens DSM 3043]
 gi|91797192|gb|ABE59331.1| flagellar protein FlgA [Chromohalobacter salexigens DSM 3043]
          Length = 251

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 1/125 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V +  I  G+ L+   L   +   S    N        +G V  + L+    +    
Sbjct: 128 RFLVAATAIQRGQRLSADMLGWERADVSRRPRNALDDPSQAIGKVVMQRLVKGMALRGDR 187

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L +PY++ RG  V +I      +++  G AL++   GD I  +  D G ++ G V   G 
Sbjct: 188 LRQPYLVHRGEAVTLIARGDGFSVTREGEALNNGGKGDAIRARMPD-GQVIRGEVDAQGR 246

Query: 147 VRVVV 151
           + V  
Sbjct: 247 LTVRY 251


>gi|307131613|ref|YP_003883629.1| flagellar basal-body P-ring formation protein flgA [Dickeya
           dadantii 3937]
 gi|306529142|gb|ADM99072.1| Flagellar basal-body P-ring formation protein flgA [Dickeya
           dadantii 3937]
          Length = 228

 Score = 98.4 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +   V G+ VV +  I  G  L    ++ ++     +      + ++  G V  R +
Sbjct: 95  FVQVEVQVTGNYVVAAAPIGRGAELTSGDIRTIRGRIDQLPPRALFTPEEAQGAVALRDI 154

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            P   +   ++ +P+VI  G  V+I+      ++ + G A+++A+ G     +   +G +
Sbjct: 155 APGQALTQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQSARAR-TASGQV 213

Query: 137 VSGSVVDTGTVRV 149
           VSG   D G + +
Sbjct: 214 VSGIATDDGIILI 226


>gi|302343758|ref|YP_003808287.1| flagella basal body P-ring formation protein FlgA [Desulfarculus
           baarsii DSM 2075]
 gi|301640371|gb|ADK85693.1| flagella basal body P-ring formation protein FlgA [Desulfarculus
           baarsii DSM 2075]
          Length = 321

 Score = 98.0 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V     V S  +   +++    ++  ++  +    +       V+G+ TR  +     +
Sbjct: 193 DVYAPVAVASRSLARRQIIGPDDVELARINLAEAPRDVVTEPDQVIGMRTRGAVGMGQPL 252

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +  +    +I RG  V I+     M IST G A      G VI + N+ T   V+G V 
Sbjct: 253 DMRWVEPAPLIQRGEIVNILAKAPGMRISTKGRAEETGFRGKVIRLTNLATKRTVNGRVN 312

Query: 143 DTGTVRV 149
             G V V
Sbjct: 313 APGEVIV 319


>gi|91976160|ref|YP_568819.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris BisB5]
 gi|91682616|gb|ABE38918.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB5]
          Length = 366

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +   EV+  S +   +   + +  +       V+G+  RR L    ++  + L 
Sbjct: 208 VVLTRPVERNEVIKISDVAIERRPKAEVASDAIAR-DAVIGMQARRALRSGQIVRSTDLA 266

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +P +++R   V +I     + +++ G AL   + GDV+ V N+ +   VS +VV  G V 
Sbjct: 267 KPDLVTRDQGVTLIYQAAGIYLTSRGKALETGTEGDVVNVLNLQSKRTVSATVVGRGQVM 326

Query: 149 VVV 151
           V V
Sbjct: 327 VTV 329


>gi|2494515|sp|Q56892|FLGA_YEREN RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|793897|emb|CAA88191.1| flgA [Yersinia enterocolitica]
          Length = 224

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + AGE +    +K  Q     +            G V+ R +     +
Sbjct: 97  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 156

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG+V 
Sbjct: 157 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 215

Query: 143 DTGTVRVVV 151
           D GTV +++
Sbjct: 216 DDGTVHILL 224


>gi|332161318|ref|YP_004297895.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665548|gb|ADZ42192.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 226

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + AGE +    +K  Q     +            G V+ R +     +
Sbjct: 99  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 158

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG+V 
Sbjct: 159 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 217

Query: 143 DTGTVRVVV 151
           D GTV +++
Sbjct: 218 DDGTVHILL 226


>gi|317406205|gb|EFV86454.1| flagella basal body P-ring formation protein [Achromobacter
           xylosoxidans C54]
          Length = 249

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            ++ YV +  S    V GH  V S +I AG+ L  + L         +      + + VV
Sbjct: 112 AWTTYVQATVS----VPGHYYVASRMIAAGQALTPADLAPRDGDLVALPPGVITNPQTVV 167

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G+     +     +  + L     + RG+ VRI        +S+ G AL +A+ G  + V
Sbjct: 168 GMTAAYRINAGQPVKGAALRNAQSVVRGSNVRINARGKGFVVSSEGQALDNAAPGATVQV 227

Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
           +   +G +VSG V + G V + +
Sbjct: 228 R-TASGQVVSGVVRNAGLVEIQL 249


>gi|190574268|ref|YP_001972113.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Stenotrophomonas maltophilia K279a]
 gi|190012190|emb|CAQ45813.1| putative flagella basal body P-ring formation protein
           [Stenotrophomonas maltophilia K279a]
          Length = 218

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 58/134 (43%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +        +V +  I  GE L  + +   Q   + I G         +G + RR L
Sbjct: 84  FVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    +I RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +
Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203

Query: 137 VSGSVVDTGTVRVV 150
           V G+V   G V V 
Sbjct: 204 VQGTVDAAGDVIVA 217


>gi|114765243|ref|ZP_01444375.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
           bermudensis HTCC2601]
 gi|114542378|gb|EAU45406.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           HTCC2601]
          Length = 220

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 58/121 (47%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP+  +  GE+++ + +K + +  + +        + + G+  RR+L     +    +  
Sbjct: 99  VPTRRLMPGEIVSAADIKIVDLPIARVGVFTLTDAEMLEGMQVRRMLAQGRPVMRQSVME 158

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P VI RG KV I+   G + ++  G AL+DA  G  + + N+ +   ++    + G V V
Sbjct: 159 PLVIGRGDKVNILYDDGRLVVTAPGRALTDAHRGQDVRIVNLVSNNALTAVAREEGLVEV 218

Query: 150 V 150
           +
Sbjct: 219 I 219


>gi|183598613|ref|ZP_02960106.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
 gi|188020792|gb|EDU58832.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
          Length = 218

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L  +V G   V +  I  GE +    +   +     +    A     + G +  R +
Sbjct: 84  FIQLTVNVTGQYYVATRNIARGEKIEFVDIGTQKGLLHKLPTGAATDKVAIRGSIALRDI 143

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                +  S++ RP+ +  G  V +     N ++   G A+++A+ G+   V+ +  G +
Sbjct: 144 NAGQTLTQSMMRRPWAVKAGQNVYVFANGHNFSVKYEGRAINNAATGENTRVR-LINGQV 202

Query: 137 VSGSVVDTGTVRVVVK 152
           V+G  ++ G+VRV +K
Sbjct: 203 VNGEALENGSVRVALK 218


>gi|238799103|ref|ZP_04642559.1| Flagella basal body P-ring formation protein flgA [Yersinia
           mollaretii ATCC 43969]
 gi|238717050|gb|EEQ08910.1| Flagella basal body P-ring formation protein flgA [Yersinia
           mollaretii ATCC 43969]
          Length = 234

 Score = 98.0 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V S  + AG  +    ++  Q     +        +   G V+ R +     +
Sbjct: 107 QVSGRYAVASRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPQFAQGSVSLRQINAGQPL 166

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG V 
Sbjct: 167 TRNMLRRLWIIKSGQDVQVLAQGDGFNVNSNGKAMNNAAIQDSVRVR-MPSGQIVSGVVA 225

Query: 143 DTGTVRVVV 151
           D GT+R+++
Sbjct: 226 DDGTIRIML 234


>gi|86750897|ref|YP_487393.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris HaA2]
 gi|86573925|gb|ABD08482.1| Flageller protein FlgA [Rhodopseudomonas palustris HaA2]
          Length = 358

 Score = 97.6 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A V +  I   EV+  S +   +   +    +     +  +G+  RR L    ++  + 
Sbjct: 205 PATVLTRSIERNEVIKASDVAIERRPKAEAASDIVVR-EVAIGMQARRTLRSGQLVRSAD 263

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L +P +++R   V +I     + +++ G AL   + GDVI V N+ +   V+ +V+  G 
Sbjct: 264 LAKPDLVTRDQGVTLIYQAAGIYLTSRGKALETGTEGDVINVLNLHSKRTVAATVIGRGQ 323

Query: 147 VRV 149
           V V
Sbjct: 324 VMV 326


>gi|300722686|ref|YP_003711976.1| flagellar basal-body periplasmic P ring assembly protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297629193|emb|CBJ89789.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Xenorhabdus nematophila ATCC 19061]
          Length = 223

 Score = 97.6 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
               + +VIG  +V    I+   VL E   +    +   +  +   + K +   +  R +
Sbjct: 90  FIQAYVNVIGPYLVSKRTIHRSAVLTEKDFQIKTGSLDKLPNDIIRNRKAIQNGIAIRNI 149

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                I  +++ RP+ I  G  V + +   +  +   G A+++A+  D I V+ +++G +
Sbjct: 150 PAGQSITRNMIRRPWAIKAGQNVVVTVDGHHFQVRYEGKAINNAASFDNIRVR-LNSGQV 208

Query: 137 VSGSVVDTGTVRVVV 151
           ++G   + G+V++++
Sbjct: 209 ITGEAQENGSVKMML 223


>gi|77968586|gb|ABB09966.1| Flagellar protein FlgA [Burkholderia sp. 383]
          Length = 421

 Score = 97.6 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  +    V     V +  I  GE L+ + L       + +           +G
Sbjct: 285 WTVYLQAKVT----VQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 340

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 341 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 400

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 401 -MAAGQIVTAIVKDAGTVEI 419


>gi|332305609|ref|YP_004433460.1| flagella basal body P-ring formation protein FlgA [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172938|gb|AEE22192.1| flagella basal body P-ring formation protein FlgA [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 236

 Score = 97.6 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV S  ++ G +LN+S +K + +  + +R     ++ DV+G   +R + P   I  
Sbjct: 113 MQPVVVISNAVSPGTILNQSNIKLVDMNRALLRRTTFSTLDDVLGARIKRRVRPGQPITP 172

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + L     + +G  + I  +   M +   G+A+ D +IGD I+V N  +   ++  V  T
Sbjct: 173 NNL---CFVCKGDTIVINASNPMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAST 229

Query: 145 GTVRV 149
             V V
Sbjct: 230 SEVVV 234


>gi|161702954|ref|YP_370610.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           sp. 383]
          Length = 320

 Score = 97.6 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  +    V     V +  I  GE L+ + L       + +           +G
Sbjct: 184 WTVYLQAKVT----VQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 239

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 240 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 299

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 300 -MAAGQIVTAIVKDAGTVEI 318


>gi|170742324|ref|YP_001770979.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
 gi|168196598|gb|ACA18545.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           sp. 4-46]
          Length = 347

 Score = 97.6 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +    V +  +  GE +    +   +        +       +VG V +R L P   +  
Sbjct: 206 MVEVAVLARPLARGETVGPQDVTLERRPRDAAPPDGVADAASLVGQVAQRALAPGQPLRS 265

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + L RP ++ RG  V I+     ++++  G+A     +G  ++V N  +  ++ G+VV  
Sbjct: 266 ADLARPDLVQRGEAVTILYEGPGVSLALGGLAREGGPLGATVSVVNPVSKKVLQGTVVGP 325

Query: 145 GTVRV 149
           G V V
Sbjct: 326 GRVSV 330


>gi|318605238|emb|CBY26736.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 226

 Score = 97.2 bits (241), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + AGE +    +K  Q     +            G V+ R +     +
Sbjct: 99  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 158

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +V+G+V 
Sbjct: 159 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVNGTVA 217

Query: 143 DTGTVRVVV 151
           D GTV +++
Sbjct: 218 DDGTVHILL 226


>gi|307731367|ref|YP_003908591.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1003]
 gi|307585902|gb|ADN59300.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1003]
          Length = 543

 Score = 97.2 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + +  ++AGEVL  + L   +   + +           VG
Sbjct: 407 WTIYLQARISLHAT----YYLAARAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 462

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            +T   + P   +   +L     +S G  V+++       IS+ G A+++AS G  + VK
Sbjct: 463 SLTLTRVSPGMPLRRDMLRSASAVSIGQTVKVVAAGDGFAISSEGSAMNNASPGQQVRVK 522

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 523 -TANGQIISGIVKDGSTVEIQL 543


>gi|109899408|ref|YP_662663.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pseudoalteromonas atlantica T6c]
 gi|109701689|gb|ABG41609.1| flagella basal body P ring formation protein FlgA
           [Pseudoalteromonas atlantica T6c]
          Length = 236

 Score = 97.2 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV S  ++ G +LN+S ++ + +  + +R     ++ DV+G   +R + P   I  
Sbjct: 113 MQPVVVISNAVSPGTILNQSNIELINMNRALLRRTTFSNVDDVMGARIKRRVRPGQPITP 172

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           + L     + +G  + I  +   M +   G+A+ D +IGD I+V N  +   ++  V  T
Sbjct: 173 NNL---CFVCKGDTIIINASNSMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAST 229

Query: 145 GTVRV 149
             V V
Sbjct: 230 SEVVV 234


>gi|115283110|gb|ABI88627.1| flagellar protein FlgA [Burkholderia ambifaria AMMD]
          Length = 436

 Score = 97.2 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +           VG
Sbjct: 300 WTVYLQAKV----AVQATYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 355

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  I V+
Sbjct: 356 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 415

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 416 -MAAGQIVTAIVKDAGTVEI 434


>gi|332140540|ref|YP_004426278.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550562|gb|AEA97280.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 238

 Score = 96.8 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 3/119 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    ++ G VL  S L   +V    +R      ++ ++G   +R +     I  ++L 
Sbjct: 119 VVTQGAVSPGTVLTSSNLTLAKVDVRRLRHTAFTDLEALIGARMKRRVTNGQAIQSNML- 177

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               + +G ++ I      M + TAGIA  D  +GD I V N  +   V   V     V
Sbjct: 178 --CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVLNASSRKAVIARVASPEEV 234


>gi|260768766|ref|ZP_05877700.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
 gi|260616796|gb|EEX41981.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
           furnissii CIP 102972]
          Length = 233

 Score = 96.8 bits (240), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%)

Query: 10  FSLYVLSLDSLFASVIG----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +   +   + A+ +      A+  +  +  G  L    +   +VT S+ +       +
Sbjct: 90  WWVSCPTQWKIKATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYRERE 148

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            V+G   RR +   H+I  + L + YV+ +G  V +       T+ T   A S+  IGD 
Sbjct: 149 QVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAESNGLIGDT 208

Query: 126 IAVKNIDTGVMVSGSVVDTGTVR 148
           I V++ D+G ++S  VV  G V 
Sbjct: 209 IWVRSRDSGRLLSVKVVGDGEVE 231


>gi|239995132|ref|ZP_04715656.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
           macleodii ATCC 27126]
          Length = 238

 Score = 96.8 bits (240), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 3/119 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    I+ G VL  S L   +V    +R      ++ ++G   +R +     I  ++L 
Sbjct: 119 VVTQGAISPGTVLTSSNLSLAKVDVRRLRHTAFTELEALIGARIKRRVTDGQAIQSNML- 177

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               + +G ++ I      M + TAGIA  D  +GD I V N  +   V   V     V
Sbjct: 178 --CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVINASSQKAVIARVASPEEV 234


>gi|194365685|ref|YP_002028295.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Stenotrophomonas maltophilia R551-3]
 gi|194348489|gb|ACF51612.1| flagella basal body P-ring formation protein FlgA [Stenotrophomonas
           maltophilia R551-3]
          Length = 218

 Score = 96.8 bits (240), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 58/134 (43%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +        +V +  I  GE L  + +   Q   + I G         +G + RR L
Sbjct: 84  FVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               ++  + L    +I RG  V ++  +G++ +  AG A+ DA   + ++V+N+ +  +
Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203

Query: 137 VSGSVVDTGTVRVV 150
           V G+V   G V V 
Sbjct: 204 VQGTVDAAGDVIVA 217


>gi|123442788|ref|YP_001006765.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089749|emb|CAL12602.1| flagella basal body P-ring formation protein FlgA [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 200

 Score = 96.8 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + AG  +    ++  Q     +            G V+ R +     +
Sbjct: 73  QVSGHYAVAARQLAAGAKMTLQDIEMKQGRLDTLPPGALLEPNFAQGAVSLRPINAGQPL 132

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG+V 
Sbjct: 133 TRNMLRRLWIIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 191

Query: 143 DTGTVRVVV 151
           D GTV +++
Sbjct: 192 DDGTVHILL 200


>gi|261821149|ref|YP_003259255.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pectobacterium wasabiae WPP163]
 gi|261605162|gb|ACX87648.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
           wasabiae WPP163]
          Length = 222

 Score = 96.8 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+ V  S  IN G  L E+ +   +     +      +++   G V  R L P  VI
Sbjct: 95  QVTGNYVTSSRPINRGTTLTENDIGLTKGRLDLLPLRPILTLQGAQGAVLLRDLTPGQVI 154

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S++ R +V+  G  V+II      TI+  G A+++A+ G  + V+    G ++SG   
Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIISGITN 213

Query: 143 DTGTVRV 149
           + G + +
Sbjct: 214 EDGIILI 220


>gi|253688976|ref|YP_003018166.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755554|gb|ACT13630.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 222

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+ V  S  IN G  L E  +   +     +      +++   G V  R L P  VI
Sbjct: 95  QVTGNYVTSSRPINRGTTLTEKDMSLTKGRLDLLPLRPILTLQGAQGAVLLRDLTPGQVI 154

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S++ R +V+  G  V+II      TI+  G A+++A++G  + V+    G ++SG   
Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAVGQAVRVR-TANGQIISGITN 213

Query: 143 DTGTVRV 149
             G + +
Sbjct: 214 KDGIILI 220


>gi|162389965|ref|YP_774961.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           ambifaria AMMD]
          Length = 315

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +           VG
Sbjct: 179 WTVYLQAKV----AVQATYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 234

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  I V+
Sbjct: 235 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 294

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 295 -MAAGQIVTAIVKDAGTVEI 313


>gi|242238965|ref|YP_002987146.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech703]
 gi|242131022|gb|ACS85324.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech703]
          Length = 234

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 1/128 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            VI   VV +  I     +    +   +     +      +  + +G VT R+L     I
Sbjct: 107 QVIAPYVVAAKTIPTRHQIQADDIAVTRGRIDLLTTAPITTPAEAIGNVTTRMLGAGQAI 166

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L   + I  G  V+++++    +I++ G AL +A++ D + V+ +D+G ++SG   
Sbjct: 167 SAKMLRSAWAIKMGEPVQVVVSGTGFSINSEGKALENAAVNDKVRVR-MDSGQIISGIAA 225

Query: 143 DTGTVRVV 150
           + G VR++
Sbjct: 226 EKGLVRII 233


>gi|253990131|ref|YP_003041487.1| flagella basal body p-ring formation protein flga [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211639032|emb|CAR67646.1| flagella basal body p-ring formation protein flga [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781581|emb|CAQ84744.1| flagella basal body p-ring formation protein flga [Photorhabdus
           asymbiotica]
          Length = 219

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 68/135 (50%), Gaps = 1/135 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +  SV G+ +V    ++  +VL+E  ++        +  +   +  ++   V  R +
Sbjct: 86  FIQVAVSVTGNYLVTRRALSRNDVLSEKDVQVRSGLLEKLPHDLIFNKNEIKNGVAVRNI 145

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
               V+  ++L RP+ +  G  V +I+      I   G A+++A+  D + V+ +++G++
Sbjct: 146 PAGQVLTRTMLRRPWAVRSGQNVVVIVQGDGFQIRNEGKAINNAATSDKVRVR-MNSGLV 204

Query: 137 VSGSVVDTGTVRVVV 151
           ++G  ++ G+V++++
Sbjct: 205 ITGQALENGSVKIML 219


>gi|167585189|ref|ZP_02377577.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ubonensis Bu]
          Length = 184

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  +    V       +  I  GEVL  + L       + +           VG
Sbjct: 48  WTVYLQAKVT----VQATYYAAARQIAPGEVLTAADLVARDGDLTLLPLAVITDPSQAVG 103

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 104 STALARVAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 163

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 164 -MAAGQIVTAIVKDAGTVEI 182


>gi|327393467|dbj|BAK10889.1| flagella basal body P-ring formation protein FlgA precursor
           [Pantoea ananatis AJ13355]
          Length = 219

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V + +I  G  + +   +       N+      + + V   V  R + P 
Sbjct: 89  VQVQVTGDYLVATKLIARGSTVTKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +  S+L +P+ +  G  V ++ +      S  G AL++ +I   + V+ +  G +VSG
Sbjct: 149 QPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVVSG 207

Query: 140 SVVDTGTVRVVV 151
            V D G + + +
Sbjct: 208 RVSDDGKILITL 219


>gi|315180469|gb|ADT87383.1| flagellar basal body P-ring biosynthesis protein flgA [Vibrio
           furnissii NCTC 11218]
          Length = 233

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%)

Query: 10  FSLYVLSLDSLFASVIG----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + +   +   + A+ +      A+  +  +  G  L    +   +VT S+ +       +
Sbjct: 90  WWVSCPTQWKIKATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYRERE 148

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
            V+G   RR +   H+I  + L + YV+ +G  V +       T+ T   A ++  IGD 
Sbjct: 149 QVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAENNGLIGDT 208

Query: 126 IAVKNIDTGVMVSGSVVDTGTVR 148
           I V++ D+G ++S  VV  G V 
Sbjct: 209 IWVRSRDSGRLLSVKVVGDGEVE 231


>gi|254488219|ref|ZP_05101424.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
           GAI101]
 gi|214045088|gb|EEB85726.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
           GAI101]
          Length = 123

 Score = 96.5 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VVP+  + A  ++ E  +    V+      +    ++DV+G   R VL     I L
Sbjct: 1   MAQVVVPTRTVRADAIITEMDVMIGNVS----AADGFDRLRDVIGQEARVVLYAGRPIML 56

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             +  P ++ R   V +      + I+T G AL    +GD I V N+ +   + G V   
Sbjct: 57  DQIGPPAIVDRNQIVSLFFEGRGLRIATEGRALERGGVGDNIRVMNLASRATLFGQVQQD 116

Query: 145 GTVRV 149
           GT+++
Sbjct: 117 GTIQI 121


>gi|161610400|ref|NP_883779.2| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           parapertussis 12822]
          Length = 236

 Score = 96.1 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y  +  S    V G   V +  I  G+ +  + L         +          ++G
Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     I  + L     +SRG  VRI        +S+ G AL +A     + V+
Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPSATVQVR 215

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V   G V + +
Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236


>gi|291617016|ref|YP_003519758.1| FlgA [Pantoea ananatis LMG 20103]
 gi|291152046|gb|ADD76630.1| FlgA [Pantoea ananatis LMG 20103]
          Length = 219

 Score = 96.1 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V + +I  G  +++   +       N+      + + V   V  R + P 
Sbjct: 89  VQVQVTGDYLVATKLIARGSTVSKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +  S+L +P+ +  G  V ++ +      S  G AL++ +I   + V+ +  G +VSG
Sbjct: 149 QPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVVSG 207

Query: 140 SVVDTGTVRVVV 151
            V D G + + +
Sbjct: 208 RVSDDGKILITL 219


>gi|224826244|ref|ZP_03699346.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
 gi|224601345|gb|EEG07526.1| flagella basal body P-ring formation protein FlgA [Lutiella
           nitroferrum 2002]
          Length = 228

 Score = 96.1 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SL +    +         VV +  + AGE+L    ++  ++T+  +  N  + +   +G
Sbjct: 92  WSLRLPVTIAEK----RMGVVATRPLKAGELLAPDDVRLAEMTSPALSRNVLNRLDQAIG 147

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              R  +     +   +L +P VI    +V+++        +  G A  +A+ G+ + V+
Sbjct: 148 QSMRSSVPAGAWLRSFMLQQPDVIRTNQRVKVLAQGDGFVATAEGTARGNAAAGESVRVR 207

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            + +G  VSG     G+V V
Sbjct: 208 -MASGREVSGVAQADGSVLV 226


>gi|317050616|ref|YP_004111732.1| flagella basal body P-ring formation protein FlgA
           [Desulfurispirillum indicum S5]
 gi|316945700|gb|ADU65176.1| flagella basal body P-ring formation protein FlgA
           [Desulfurispirillum indicum S5]
          Length = 249

 Score = 96.1 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV-GLVTRRVLLPDHVIP 83
           +  A VP   I  GEVL E   +      +  R        D    +V+ R L    ++ 
Sbjct: 122 MVEAYVPVRNITRGEVLREGDFRRQLFPATQARNAMDIGETDFASHIVSTRNLQEGQIVR 181

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            + L R Y + RG  V +I     +T+S A +A   A +GDV+ +KN  +G +++  ++ 
Sbjct: 182 TTDLRREYAVQRGDIVEVIYRHDRLTLSMAAVATERAYLGDVVRLKNPSSGRILTARLLQ 241

Query: 144 TGTVRVVV 151
                ++ 
Sbjct: 242 GKKAEIIY 249


>gi|296102912|ref|YP_003613058.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057371|gb|ADF62109.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 218

 Score = 96.1 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +V I  G +L+ S +   +     +       I      V+ R + P 
Sbjct: 88  VAVQATGNYVVAAVPIARGSMLHASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVAPG 147

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + +  G +V ++       I++ G AL++A++     V+ + +G +VSG
Sbjct: 148 QPIQLSMLRQAWRVKAGQQVMVVANGDGFQINSEGKALNNAAVAQNARVR-MSSGQVVSG 206

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 207 TVDSDGNILI 216


>gi|257140552|ref|ZP_05588814.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           thailandensis E264]
 gi|284159417|ref|YP_440797.3| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           thailandensis E264]
 gi|83652486|gb|ABC36549.1| FlgA family protein [Burkholderia thailandensis E264]
          Length = 538

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 402 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 457

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIST G  L++A+ G  + V+
Sbjct: 458 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 517

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 518 -MAAGQIVTAIVKDAATVEI 536


>gi|126463745|ref|YP_001044859.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105409|gb|ABN78087.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
          Length = 139

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  + A  +L    L                 +   +G   R  L     +  + L 
Sbjct: 19  VVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPVRAADLG 74

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P +I R   V +    G + I   G ALS   +GD I V N+ +   VSG + + G V 
Sbjct: 75  PPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVH 134

Query: 149 V 149
           V
Sbjct: 135 V 135


>gi|50120635|ref|YP_049802.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pectobacterium atrosepticum SCRI1043]
 gi|49611161|emb|CAG74607.1| flagella basal body P-ring formation protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 222

 Score = 95.7 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+ V+ S  IN G  L E  +   +     +      +++   G V  R L P  VI
Sbjct: 95  QVTGNYVISSRPINRGTALTEKDISLTKGRLDLLPLRPILTLQGAQGAVILRDLTPGQVI 154

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S++ R +++  G  V+II      TI+  G A+++A+ G  + V+    G ++SG   
Sbjct: 155 TTSMIRRAWIVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIISGITN 213

Query: 143 DTGTVRV 149
           + G + +
Sbjct: 214 EDGIILI 220


>gi|227112517|ref|ZP_03826173.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 222

 Score = 95.7 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+ V  + +IN G  L E  ++  +     +      ++    G V  R L P  VI
Sbjct: 95  QVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDLTPGQVI 154

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S++ R +V+  G  V+II      TI+  G A+++A+ G  + V+    G +VSG   
Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIVSGITN 213

Query: 143 DTGTVRV 149
           + G + +
Sbjct: 214 EDGIILI 220


>gi|251789164|ref|YP_003003885.1| flagellar basal body P-ring biosynthesis protein FlgA [Dickeya zeae
           Ech1591]
 gi|247537785|gb|ACT06406.1| flagella basal body P-ring formation protein FlgA [Dickeya zeae
           Ech1591]
          Length = 222

 Score = 95.7 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +   V G  VV +  ++ G  L    ++ ++     +      + ++  G +  R +
Sbjct: 89  FIQVEVQVTGSYVVAAAPVSRGSELAAGDIRTVRGRIDQLPPRALFTPEEAQGAIALRDI 148

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            P   I   ++ +P+VI  G  V+I+      ++ + G A+++A+ G     +   +G +
Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGEGFSVRSEGKAMNNAASGQPARAR-TASGQV 207

Query: 137 VSGSVVDTGTVRV 149
           VSG     G + +
Sbjct: 208 VSGIASGDGIILI 220


>gi|271500062|ref|YP_003333087.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech586]
 gi|270343617|gb|ACZ76382.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
           Ech586]
          Length = 222

 Score = 95.7 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +   V G+ V  +  I+ G  L    ++ ++     +  +   + +DV G V  R +
Sbjct: 89  FVQVEVQVTGNYVAAAAPISRGTELASGDIRMVRGRIDQLPPHALFTQEDVQGAVALRDI 148

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            P   I   ++ +P+VI  G  V+I+      ++ + G A+++A+ G     +   +G +
Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQQARAR-TASGQV 207

Query: 137 VSGSVVDTGTVRV 149
           VSG     G + +
Sbjct: 208 VSGIASGDGIILI 220


>gi|299131786|ref|ZP_07024981.1| flagella basal body P-ring formation protein FlgA [Afipia sp.
           1NLS2]
 gi|298591923|gb|EFI52123.1| flagella basal body P-ring formation protein FlgA [Afipia sp.
           1NLS2]
          Length = 343

 Score = 95.3 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 1/124 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V    +   +++  S +   +   S +  +   S+   +G+  RR +     +    L
Sbjct: 199 AAVLMRPMERNDIIKASDVSIERRPKSEVGSDGV-SLDRAIGMQMRRAMRAGQALRTLDL 257

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +  +++R   + +I     + ++  G AL   + GD + V N+ +   V G VV  G V
Sbjct: 258 AKADLVTRDQGITLIYEAPGIYLTGRGKALEAGTKGDTVNVLNLQSKRTVQGIVVGPGQV 317

Query: 148 RVVV 151
            ++ 
Sbjct: 318 AIIA 321


>gi|71906387|ref|YP_283974.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Dechloromonas aromatica RCB]
 gi|71846008|gb|AAZ45504.1| flagellar protein FlgA [Dechloromonas aromatica RCB]
          Length = 225

 Score = 95.3 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
              +S+ V        +V G+ V  +  + AG+++    +  M    S +          
Sbjct: 86  PNIWSVLVPVQI----AVTGNYVTTTRPLAAGQLVQPGDIATMSGDLSQLPTGIVTDPTS 141

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            VG   R  L     +    L    VI +G  VR+I       +S+ G A+++A+ G V 
Sbjct: 142 AVGKTLRNSLGAGQPLRSDQLLPTLVIRQGQSVRVISQGAGFAVSSEGKAINNAAEGQVA 201

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+ + +G  +SG     G+V V
Sbjct: 202 QVR-MPSGQTLSGIAKADGSVEV 223


>gi|294679030|ref|YP_003579645.1| flagella basal body P-ring formation protein FlgA [Rhodobacter
           capsulatus SB 1003]
 gi|294477850|gb|ADE87238.1| flagella basal body P-ring formation protein FlgA [Rhodobacter
           capsulatus SB 1003]
          Length = 141

 Score = 95.3 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  + A  V+ ES L   +                 VGL TR  + P   I  + L 
Sbjct: 22  VVAARTLRAQTVITESDLALSEEDVP----GALTDPLSAVGLETRTAIYPQQPISAADLV 77

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P VI R   V +    G+++I T G AL   ++GD I V NI +   +   +   G   
Sbjct: 78  APAVIERNQMVPLAYRDGSLSILTEGRALDRGAVGDTIRVMNITSKATLFAQLGADGVAY 137

Query: 149 V 149
           V
Sbjct: 138 V 138


>gi|330860611|emb|CBX70908.1| flagella basal body P-ring formation protein flgA [Yersinia
           enterocolitica W22703]
          Length = 161

 Score = 95.3 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V GH  V +  + AGE +    +K  Q     +            G V+ R +     +
Sbjct: 34  QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 93

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG+V 
Sbjct: 94  TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 152

Query: 143 DTGTVRVVV 151
           D GTV +++
Sbjct: 153 DDGTVHILL 161


>gi|238785501|ref|ZP_04629484.1| Flagella basal body P-ring formation protein flgA [Yersinia
           bercovieri ATCC 43970]
 gi|238713603|gb|EEQ05632.1| Flagella basal body P-ring formation protein flgA [Yersinia
           bercovieri ATCC 43970]
          Length = 234

 Score = 95.3 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G  VV +  + AG  +    ++  Q     +            G V+ R +     +
Sbjct: 107 QVSGRYVVATRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPHFAQGAVSLRQINAGQPL 166

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R ++I  G  V+++       +++ G A+++A+I D + V+ + +G +VSG V 
Sbjct: 167 TRNMLRRLWIIKSGQDVQVLAQGEGFNVNSYGKAMNNAAIQDNLRVR-MASGQIVSGVVG 225

Query: 143 DTGTVRVVV 151
           + GT+R+++
Sbjct: 226 EDGTIRIML 234


>gi|254470124|ref|ZP_05083528.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
 gi|211960435|gb|EEA95631.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
          Length = 322

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 51/114 (44%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  ++ G ++  + +++ +   S   G    +  D++G+  RR +     I    +  P 
Sbjct: 191 ARNLDRGAIITANDVRQERKPASRYAGREFLAAADLIGMEVRRNMRSGSTITPRDVSTPV 250

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++ RGAKV ++     M IST G A S+    D+I + N  +   +   V+   
Sbjct: 251 LVKRGAKVTVLYKIPGMNISTQGKAKSEGGKNDLIEILNPTSKKTILAEVIGKN 304


>gi|187925765|ref|YP_001897407.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           phytofirmans PsJN]
 gi|187716959|gb|ACD18183.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           phytofirmans PsJN]
          Length = 504

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + +  +  GEVL  + L       + +           VG
Sbjct: 368 WTIYLQARISLHAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            VT   +     +   +L     +S G  VR++       IS  G A+++AS G  + VK
Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504


>gi|254562215|ref|YP_003069310.1| flageller protein FlgA [Methylobacterium extorquens DM4]
 gi|254269493|emb|CAX25459.1| Flageller protein FlgA [Methylobacterium extorquens DM4]
          Length = 348

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       V +  +N GE +  + L   +     +  +   +   VVG V +R L    V
Sbjct: 205 AVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +++RG  V I+     +++S  GIA     +G  ++V N  +  ++   V
Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324

Query: 142 VDTGTVRV 149
           +  G V V
Sbjct: 325 IAPGRVSV 332


>gi|188582485|ref|YP_001925930.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           populi BJ001]
 gi|179345983|gb|ACB81395.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           populi BJ001]
          Length = 348

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       V +  +N GE +  + L   +     +  +   +   VVG V +R L    V
Sbjct: 205 AVETREVAVLTRSLNRGEAVASADLTLERRPRDAVPADVQGAPSLVVGQVAQRPLSAGSV 264

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +++RG  V I+     +++S  G+A     +G  ++V N  +  ++   V
Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSMRGVANESGRLGASVSVTNGASKKVLQAVV 324

Query: 142 VDTGTVRV 149
           +  G V V
Sbjct: 325 IGPGRVSV 332


>gi|170694388|ref|ZP_02885542.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           graminis C4D1M]
 gi|170140811|gb|EDT08985.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           graminis C4D1M]
          Length = 532

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + S  ++AGEVL  + L   +   + +           +G
Sbjct: 396 WTIYLQARVSLHAT----YYLASRAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQALG 451

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            VT   +     +   +L     +S G  VR++       IS  G A+++AS G  + VK
Sbjct: 452 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISAEGSAMNNASPGQQVRVK 511

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 512 -TANGQVISGIVKDGSTVEIQL 532


>gi|83594176|ref|YP_427928.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodospirillum rubrum ATCC 11170]
 gi|83577090|gb|ABC23641.1| Flageller protein FlgA [Rhodospirillum rubrum ATCC 11170]
          Length = 360

 Score = 95.3 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V S  +   E++    +  ++     +  +      D+VG+  R  +     +  + + R
Sbjct: 228 VLSRRVGRDEIIGPRDVSFLRERLDRLPPDAITDAADLVGMAPRVAVRDGQPLRRADVVR 287

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           P ++ +GA V + L    + +S  G AL   + GD + V N  +   +  +V     V V
Sbjct: 288 PTLLKKGALVTMELRMPGIAVSAQGRALDSGAEGDTVRVINTASNQTILATVSGGNRVIV 347


>gi|320530442|ref|ZP_08031500.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           artemidis F0399]
 gi|320137275|gb|EFW29199.1| flagella basal body P-ring formation protein FlgA [Selenomonas
           artemidis F0399]
          Length = 254

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V  H +V    I     ++ +  +  +                + G V  R +  D VI 
Sbjct: 127 VYDHVLVAMTDIRQETEISPANARIEERAVDTAPAVTLTDFSKLGGRVAGRWIRKDTVIT 186

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            + L  P VI  G  V +I     + +   G A+    IG  I V+N+ +G ++ G V+D
Sbjct: 187 PNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRVRNVRSGKILRGKVID 246

Query: 144 TGTVRV 149
             TV++
Sbjct: 247 GETVQI 252


>gi|148980287|ref|ZP_01815974.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
 gi|145961306|gb|EDK26616.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
          Length = 235

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  +  G+ L    +    +     +  +     ++ G   +R +    ++  S ++  
Sbjct: 117 ANKTLKKGQRLTHDDIAIEPIKLYKDQKVFFK-ANEIAGSKIKRSVNKGDLLTTSSMYLD 175

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           Y + +G  V ++    ++ + T G+AL    IGD ++VKN  +G ++ G V++   VR+
Sbjct: 176 YAVEKGHAVDVVFQSKSIRLETLGMALESGLIGDTVSVKNQQSGKLLRGVVIEKNRVRI 234


>gi|227328334|ref|ZP_03832358.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 222

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+ V  + +IN G  L E  ++  +     +      ++    G V  R L P  VI
Sbjct: 95  QVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDLTPGQVI 154

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S++ R +V+  G  V+II      T++  G A+++A+ G  + V+ +  G +VSG   
Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTVNGEGKAMNNAAAGQAVRVR-MANGQIVSGITN 213

Query: 143 DTGTVRV 149
           + G + +
Sbjct: 214 EDGIILI 220


>gi|170703816|ref|ZP_02894518.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ambifaria IOP40-10]
 gi|170131278|gb|EDS99903.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ambifaria IOP40-10]
          Length = 145

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +           VG
Sbjct: 9   WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 64

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL++A+ G  I V+
Sbjct: 65  ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 124

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 125 -MAAGQIVTAIVKDAGTVEI 143


>gi|85859197|ref|YP_461399.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
           aciditrophicus SB]
 gi|85722288|gb|ABC77231.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
           aciditrophicus SB]
          Length = 244

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 56/127 (44%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V     + +  +     ++E  +  ++   S +  +     + ++G    R +      
Sbjct: 116 EVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERIIGKRLLRSIKERSTF 175

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             S+L  P +  +G  V++I   G ++I+T G+A  + ++G  + +KNI +  ++   V+
Sbjct: 176 TASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVI 235

Query: 143 DTGTVRV 149
               V+V
Sbjct: 236 GNSVVKV 242


>gi|315497880|ref|YP_004086684.1| flagella basal body p-ring formation protein flga [Asticcacaulis
           excentricus CB 48]
 gi|315415892|gb|ADU12533.1| flagella basal body P-ring formation protein FlgA [Asticcacaulis
           excentricus CB 48]
          Length = 258

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A    + +V +  ++AGEV+  + +    V      G+     +  +G   R  +    V
Sbjct: 115 AGRTKNVLVFTRSLSAGEVIAAADIAWQPVQAHLAGGSLVSDPEAAIGKTVRLPVRDGGV 174

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    L  P VI R   V +      +T+S  G A  D ++GD+I V+N  +  ++   +
Sbjct: 175 VRPGDLTAPLVIRRAEMVMVTFEMNGVTLSMTGPAQKDGAVGDLILVQNPASKKLIEAVI 234

Query: 142 VDTGTVRV 149
              G+  V
Sbjct: 235 TGPGSAAV 242


>gi|261344146|ref|ZP_05971790.1| flagella basal body P-ring formation protein FlgA [Providencia
           rustigianii DSM 4541]
 gi|282567739|gb|EFB73274.1| flagella basal body P-ring formation protein FlgA [Providencia
           rustigianii DSM 4541]
          Length = 222

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 1/128 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V G   V +  IN GE +    +   +     +    A     + G +  R +     + 
Sbjct: 95  VTGQYYVATRNINRGETIEFVDIGTKKGLIHQLPSGAATEKIALRGTIALRNITAGQTLT 154

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            S++ RP+ I  G  V +  T  N ++   G A+++A IG+ I V+ +  G +V+G   +
Sbjct: 155 NSMVRRPWAIKSGQTVHVFATGNNFSVKYEGRAINNAVIGENIRVR-LINGQVVNGEAQE 213

Query: 144 TGTVRVVV 151
            G+V+V +
Sbjct: 214 NGSVQVAL 221


>gi|91785638|ref|YP_560844.1| putative flagella basal body P-ring formation protein [Burkholderia
           xenovorans LB400]
 gi|91689592|gb|ABE32792.1| putative flagella basal body P-ring formation protein [Burkholderia
           xenovorans LB400]
          Length = 502

 Score = 94.9 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + +  +  GEVL  + L       + +           VG
Sbjct: 366 WTIYLQARISLRAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 421

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            VT   +     +   +L     +S G  VR++       IS  G A+++AS G  + VK
Sbjct: 422 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGQGFAISAEGSAMNNASPGQQVRVK 481

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 482 -TANGQIISGIVKDGSTVEIQL 502


>gi|219681696|ref|YP_002468082.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682251|ref|YP_002468635.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219621984|gb|ACL30140.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624539|gb|ACL30694.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087230|gb|ADP67310.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
 gi|311087749|gb|ADP67828.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 226

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++     G  +V +  I  G  + ES LK +      +  N     KDVV  ++ R   P
Sbjct: 95  TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFFP 154

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              I   +    +++    +V +I+   N  +S+   +LS+ +    I VK  ++G +++
Sbjct: 155 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 213

Query: 139 GSVVDTGTVRV 149
           G + + G V V
Sbjct: 214 GIINENGEVIV 224


>gi|15606189|ref|NP_213566.1| flagellar protein FlgA [Aquifex aeolicus VF5]
 gi|6225340|sp|O67005|FLGA_AQUAE RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|2983376|gb|AAC06962.1| flagellar protein FlgA [Aquifex aeolicus VF5]
          Length = 223

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V    I  GE LN S ++E ++       N+    ++ V  V  + +    ++  S 
Sbjct: 102 RVLVAKRDIYPGERLNFSNVEEREIYLERCPQNF---KENFVNFVALKEIKKGTIVRRSY 158

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L + +++ RG  V  +   GN+ I     AL +   G+VI V +  +  ++ G ++  GT
Sbjct: 159 LKKEFLVKRGEIVNAVYENGNVVIRFRTKALENGYYGEVIRVLSPFSRKVIRGKIIGEGT 218

Query: 147 VRVV 150
           V+++
Sbjct: 219 VKIL 222


>gi|330818589|ref|YP_004362294.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           gladioli BSR3]
 gi|327370982|gb|AEA62338.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           gladioli BSR3]
          Length = 539

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LY+ S  S    V G   V +  ++ GEVL  + L       + +           VG
Sbjct: 403 WTLYLQSKIS----VQGTYYVAARALSPGEVLTAADLVAHDGDLTQLPLAIITDPGQAVG 458

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             +   +     +   +L     ++ G  VR++      TIS+ G  +++A  G  + V+
Sbjct: 459 GTSLVRVAAGLPLRQDMLRSAASVTIGQTVRVVAAGKGFTISSEGSVMNNAGPGQQVRVR 518

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D+GTV +
Sbjct: 519 -LAAGQIVTAVVKDSGTVEI 537


>gi|27380940|ref|NP_772469.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Bradyrhizobium japonicum USDA 110]
 gi|27354106|dbj|BAC51094.1| blr5829 [Bradyrhizobium japonicum USDA 110]
          Length = 382

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 1/122 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
             V +  I+  ++L  S +   +   + + G  A S    +G+  RR +     I ++ +
Sbjct: 196 VAVLTRDIDRADLLKSSDVALERRPKAEVTGEAA-SRDRTIGMQLRRPMRAGTPIRVADI 254

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P  + R   V II     + ++T G A+   + GD ++V N+ +   ++G V   G +
Sbjct: 255 VKPDFVQRDQNVTIIYQVPGLYLTTRGKAIESGAEGDTVSVLNLQSKRTLTGVVTGRGQI 314

Query: 148 RV 149
            V
Sbjct: 315 TV 316


>gi|15616942|ref|NP_240155.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|11386803|sp|P57418|FLGA_BUCAI RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|25323453|pir||A84969 hypothetical protein flgA [imported] - Buchnera sp. (strain APS)
 gi|10039007|dbj|BAB13041.1| flagella basal body P-ring formation protein flgA precursor
           [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
          Length = 226

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++     G  +V +  I  G  + ES LK +      +  N     KDVV  ++ R   P
Sbjct: 95  TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFP 154

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              I   +    +++    +V +I+   N  +S+   +LS+ +    I VK  ++G +++
Sbjct: 155 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 213

Query: 139 GSVVDTGTVRV 149
           G + + G V V
Sbjct: 214 GIINENGEVIV 224


>gi|238751758|ref|ZP_04613246.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
           ATCC 43380]
 gi|238710029|gb|EEQ02259.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
           ATCC 43380]
          Length = 224

 Score = 94.5 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G+  V +  + +G  +    +   Q     +            G V+ R +     +
Sbjct: 97  QVSGYYAVAARQLASGAKITPQDIVMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 156

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G  V+++       +++ G A+++A+I D + V+ + +G +VSG++ 
Sbjct: 157 TRNMLRRQWVIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTLA 215

Query: 143 DTGTVRVVV 151
           + G +R+++
Sbjct: 216 EDGIIRIIL 224


>gi|206558964|ref|YP_002229724.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           cenocepacia J2315]
 gi|198035001|emb|CAR50873.1| putative flagellar basal body P-ring formation protein FlgA
           [Burkholderia cenocepacia J2315]
          Length = 403

 Score = 94.5 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L+ + L       + +           +G
Sbjct: 267 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 322

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G  L++A+ G  + V+
Sbjct: 323 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 382

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 383 -MAAGQIVTAIVKDAGTVEI 401


>gi|292669969|ref|ZP_06603395.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
           noxia ATCC 43541]
 gi|292648381|gb|EFF66353.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
           noxia ATCC 43541]
          Length = 255

 Score = 94.5 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +V    +V    I A   ++ +  +  +     +          + G V  R +  D VI
Sbjct: 127 TVYDRVLVAMTDIRAETEISPANARVEERAVDTVPELTLTDFTRLEGRVAGRYIRRDTVI 186

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L  P V+  G  V ++     + +   G+A+    IG  I V+N  +G ++ G ++
Sbjct: 187 TPPMLAMPLVVRAGNAVELVHNANGILVRAEGVAIESGRIGYTIRVRNARSGKIMRGRII 246

Query: 143 DTGTVRVV 150
           D  TV+++
Sbjct: 247 DAQTVQII 254


>gi|163856431|ref|YP_001630729.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
           petrii DSM 12804]
 gi|163260159|emb|CAP42461.1| flagella basal body P-ring formation protein FlgA [Bordetella
           petrii]
          Length = 241

 Score = 94.5 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++ YV +  S+     G   V + +I AG+ +  + L         +          +VG
Sbjct: 105 WTQYVQATVSVR----GQYYVAAHMIPAGQTIQANDLDARDGDLVALPHGVVVDPAAIVG 160

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  R  +     I  + L     ++RG +VRI        IS+ G AL DA  G  + V+
Sbjct: 161 MRARYRIAAGQAIKGTALRSARAVTRGQQVRITARGAGFVISSEGEALDDAPPGAPVQVR 220

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG V +   V VV+
Sbjct: 221 -TPSGQVVSGIVRNATLVEVVL 241


>gi|212709488|ref|ZP_03317616.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
           30120]
 gi|212687826|gb|EEB47354.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
           30120]
          Length = 223

 Score = 94.2 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           L  +V G   V +  I  GE +    +   +     +    +     + G +  R +   
Sbjct: 92  LTVNVTGQYYVATRNIQRGETIEFVDIGTKKGLIHQLPSGASTDKMALRGTLALRNITAG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
                S++ RP+ I  G  V +  T  N ++   G A+++A IG+ I V+ +  G +V+G
Sbjct: 152 QTFTNSMVRRPWAIKAGQTVYVFATGDNFSVKYEGRAINNAVIGENIRVR-LINGQVVNG 210

Query: 140 SVVDTGTVRVVV 151
              + G+V V +
Sbjct: 211 EAQENGSVHVAL 222


>gi|311280021|ref|YP_003942252.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae SCF1]
 gi|308749216|gb|ADO48968.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae SCF1]
          Length = 219

 Score = 94.2 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G  VV +  I  G  L    +   +     +            G V+ R L P 
Sbjct: 89  VVVEATGDYVVAAQAIARGATLQAESVTLKRGRLDQLPPKTMLDPAQAQGAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + LS+L + + +  G +V++I +    ++++ G AL++A++     V+ + +G +VSG
Sbjct: 149 QPVQLSMLRQSWRVKAGQRVQVIASGDGFSVNSQGQALNNAAVAQNARVR-MPSGQIVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 MVNADGNILI 217


>gi|332994168|gb|AEF04223.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
           sp. SN2]
          Length = 240

 Score = 94.2 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + L+  +  +    +    VV S  ++ G VL+ S L    V    +R +    +  ++G
Sbjct: 106 WYLFTSAQVTRTKEI----VVTSGAVSPGTVLSASNLTLASVDIKRLRYSAFTDVDALIG 161

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              +R ++    +  ++L     + +G ++ I  + G M + T+GIA  D  IGD I V 
Sbjct: 162 ARMKRRIVDGQAVQSNML---CFVCKGDRITIRASLGGMAVKTSGIAQQDGVIGDTIKVL 218

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  +   V   V     V V
Sbjct: 219 NASSQKPVIAEVASAQEVVV 238


>gi|296157460|ref|ZP_06840295.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           Ch1-1]
 gi|295892232|gb|EFG72015.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           Ch1-1]
          Length = 504

 Score = 94.2 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      + +  +  GEVL  + L       + +           VG
Sbjct: 368 WTIYLQARISLRAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            VT   +     +   +L     +S G  VR++       IS  G A+++AS G  + VK
Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504


>gi|323527717|ref|YP_004229870.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1001]
 gi|323384719|gb|ADX56810.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
           CCGE1001]
          Length = 527

 Score = 94.2 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  SL A+      +    ++ GEVL  + L       + +           VG
Sbjct: 391 WTIYLQARVSLHAT----YYLAGRAMSVGEVLTAADLVARDGDLTGLPQAIVTDPAQAVG 446

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            VT   +     +   +L     +S G  VR++       IS+ G A+++AS G  + VK
Sbjct: 447 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISSEGSAMNNASPGQQVRVK 506

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G ++SG V D  TV + +
Sbjct: 507 -TANGQIISGIVKDGATVEIQL 527


>gi|170734378|ref|YP_001766325.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           cenocepacia MC0-3]
 gi|169817620|gb|ACA92203.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           cenocepacia MC0-3]
          Length = 408

 Score = 94.2 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L+ + L       + +           +G
Sbjct: 272 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 327

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G  L++A+ G  + V+
Sbjct: 328 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 387

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 388 -MAAGQIVTAIVKDAGTVEI 406


>gi|257471390|ref|ZP_05635389.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|311086073|gb|ADP66155.1| flagella basal-body P-ring formation protein FlgA precursor
           [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
          Length = 229

 Score = 94.2 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++     G  +V +  I  G  + ES LK +      +  N     KDVV  ++ R   P
Sbjct: 98  TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFFP 157

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              I   +    +++    +V +I+   N  +S+   +LS+ +    I VK  ++G +++
Sbjct: 158 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 216

Query: 139 GSVVDTGTVRV 149
           G + + G V V
Sbjct: 217 GIINENGEVIV 227


>gi|261339372|ref|ZP_05967230.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318173|gb|EFC57111.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cancerogenus ATCC 35316]
          Length = 219

 Score = 93.8 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  I  G  L  S +   +     +       I      V+ R + P 
Sbjct: 89  VAVQATGNYVVAAQPIVRGSQLQASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS++ + + +  G +V ++      +I + G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLSMIRQAWRVKAGQQVMVVANGDGFSIKSEGKALNNAAVAQNARVR-MSSGQVVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVGSDGNILI 217


>gi|134297202|ref|YP_001120937.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           vietnamiensis G4]
 gi|134140359|gb|ABO56102.1| SAF domain protein [Burkholderia vietnamiensis G4]
          Length = 443

 Score = 93.8 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +  +    V     V +  I  GE L  + L       + +           +G
Sbjct: 307 WTVYLQAKVT----VQATYYVAARQIAPGEPLTAADLIARNGDLTVLPLAVITDPAQAIG 362

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             +   +     +   +L     +S G  VR++      TIS  G AL++A+ G  + V+
Sbjct: 363 ATSLARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGNALANAAPGQSVRVR 422

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 423 -MAAGQIVTAIVKDAGTVEI 441


>gi|171322729|ref|ZP_02911475.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ambifaria MEX-5]
 gi|171091921|gb|EDT37390.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           ambifaria MEX-5]
          Length = 188

 Score = 93.8 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +           VG
Sbjct: 52  WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 107

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G AL+ A+ G  + V+
Sbjct: 108 ATALARISAGLPLRQDLLKSAASVSAGQTVRVVAAGPGFTISAEGSALATAAPGQSVRVR 167

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 168 -MAAGQIVTAIVKDAGTVEI 186


>gi|291326358|ref|ZP_06124207.2| flagella basal body P-ring formation protein FlgA [Providencia
           rettgeri DSM 1131]
 gi|291314705|gb|EFE55158.1| flagella basal body P-ring formation protein FlgA [Providencia
           rettgeri DSM 1131]
          Length = 212

 Score = 93.8 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 1/136 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              L  +V G   V +  IN GE +    +   +     +    +     + G V  R +
Sbjct: 78  FIQLTVNVTGQYYVATRNINRGEPIQFVDIGTKKGLLHKLPAGASTDKIALRGAVALRNI 137

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                   S+  +P+ I  G  V +  +  N ++   G A+++A+ G    V+ +  G +
Sbjct: 138 PAGQTFTKSMTRQPWAIKAGQTVFVFASGDNFSVKYEGRAINNATAGQNTRVR-LLNGQV 196

Query: 137 VSGSVVDTGTVRVVVK 152
           V+G  ++ G+V+V +K
Sbjct: 197 VNGEALENGSVQVALK 212


>gi|163852463|ref|YP_001640506.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           extorquens PA1]
 gi|163664068|gb|ABY31435.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           extorquens PA1]
          Length = 348

 Score = 93.8 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       V +  +N GE +  + L   +     +  +   +   VVG V +R L    V
Sbjct: 205 AVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +++RG  V I+     +++S  GIA     +G  ++V N  +  ++   V
Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANECGRLGASVSVTNAASKKVLQAVV 324

Query: 142 VDTGTVRV 149
           +  G V V
Sbjct: 325 IAPGRVSV 332


>gi|218531219|ref|YP_002422035.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
 gi|218523522|gb|ACK84107.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           chloromethanicum CM4]
          Length = 348

 Score = 93.8 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       V +  +N GE +  + L   +     +  +   +   VVG V +R L    V
Sbjct: 205 AVETREVAVLTRSLNRGEAVASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +++RG  V I+     +++S  GIA     +G  ++V N  +  ++   V
Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324

Query: 142 VDTGTVRV 149
           +  G V V
Sbjct: 325 IAPGRVSV 332


>gi|294635606|ref|ZP_06714083.1| flagella basal body P-ring formation protein FlgA [Edwardsiella
           tarda ATCC 23685]
 gi|291091058|gb|EFE23619.1| flagella basal body P-ring formation protein FlgA [Edwardsiella
           tarda ATCC 23685]
          Length = 227

 Score = 93.4 bits (231), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    +N G+ L+ ++ +  Q     +       +  + G    R +     I
Sbjct: 100 QVTGRYPVTVKALNRGQNLSATQFRLTQGRLDTLPPGTILDLTRLEGATVLRNIGAGQPI 159

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             +++ R +VI  G +V+I+       +S+ G A+++A++ DV+  +   +G ++SG   
Sbjct: 160 AATMVRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 218

Query: 143 DTGTVRVVV 151
             GT+ V +
Sbjct: 219 GPGTLSVTL 227


>gi|105894146|gb|ABF77311.1| Flagellar protein FlgA [Burkholderia cenocepacia AU 1054]
 gi|116649133|gb|ABK09774.1| flagellar protein FlgA [Burkholderia cenocepacia HI2424]
          Length = 405

 Score = 93.4 bits (231), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L+ + L       + +           +G
Sbjct: 269 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 324

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G  L++A+ G  + V+
Sbjct: 325 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 384

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 385 -MAAGQIVTAIVKDAGTVEI 403


>gi|238919255|ref|YP_002932770.1| flagella basal body P-ring formation protein FlgA, [Edwardsiella
           ictaluri 93-146]
 gi|238868824|gb|ACR68535.1| flagella basal body P-ring formation protein FlgA, putative
           [Edwardsiella ictaluri 93-146]
          Length = 223

 Score = 93.4 bits (231), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    +  G+ L  ++L+  +    ++       I  + G  T R +     I
Sbjct: 96  QVTGSYPVAIHALPRGQNLTAAQLRLTRGRLDSLPPGTILDIARLSGATTLRSIGAGQPI 155

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G +V+I+       +S+ G A+++A++ DV+ V+   +G ++SG   
Sbjct: 156 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVQVR-TASGQVISGKAS 214

Query: 143 DTGTVRVVV 151
             GT+ +V+
Sbjct: 215 GPGTLTLVL 223


>gi|167617580|ref|ZP_02386211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           thailandensis Bt4]
          Length = 212

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 76  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 131

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIST G  L++A+ G  + V+
Sbjct: 132 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 191

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 192 -MAAGQIVTAIVKDAATVEI 210


>gi|253998492|ref|YP_003050555.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
           SIP3-4]
 gi|313200567|ref|YP_004039225.1| flagella basal body p-ring formation protein flga [Methylovorus sp.
           MP688]
 gi|253985171|gb|ACT50028.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
           SIP3-4]
 gi|312439883|gb|ADQ83989.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
           MP688]
          Length = 242

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
              +++Y+ +  +    V+G  +V +  +  G V++   L       + +        + 
Sbjct: 103 APAWTIYMQATVN----VVGQYLVAAAPLAQGRVVDSGDLLFESGDLAQLPPGIFTDPEQ 158

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            +G +    +    V+   +L    V+ +G  V +I      +IS  G AL++A+ G ++
Sbjct: 159 AIGRIVNISMNAGTVLRQEMLKASPVVQQGQTVTLITRGKGFSISAEGHALNNATDGQLV 218

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            VK +  G +VSG   + G + V
Sbjct: 219 RVK-VANGQVVSGIARNGGKIEV 240


>gi|308186389|ref|YP_003930520.1| Flagella basal body P-ring formation protein flgA precursor
           [Pantoea vagans C9-1]
 gi|308056899|gb|ADO09071.1| Flagella basal body P-ring formation protein flgA precursor
           [Pantoea vagans C9-1]
          Length = 219

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V + ++N G  ++ES           +      +   V   V  R + P 
Sbjct: 89  VQVQVTGSYLVATRLLNQGSSVSESDFTLQTGRLDTLPARALLNADAVADAVVLRDIQPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  S L +P+ +  G  V +I +      S  G AL++A+    + V+ +  G +VSG
Sbjct: 149 QPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQIVSG 207

Query: 140 SVVDTGTVRVVV 151
            V + G + + +
Sbjct: 208 KVREDGNILITL 219


>gi|32477361|ref|NP_870355.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula
           baltica SH 1]
 gi|32447912|emb|CAD77432.1| similar to LfgA (potential lateral flagellar protein similar to
           FlgA) [Rhodopirellula baltica SH 1]
          Length = 477

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 51/123 (41%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV    +  G  +    +       + + G+    + +V+G+    ++     +  S  
Sbjct: 336 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 395

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++ RG  V + ++ G + ++T   AL D +  ++I ++ +     +   VV+   V
Sbjct: 396 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 455

Query: 148 RVV 150
            +V
Sbjct: 456 EIV 458


>gi|313894969|ref|ZP_07828528.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312976422|gb|EFR41878.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 233

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +V    +V    I     ++ +  +  +     +          + G V  R +  D VI
Sbjct: 105 TVYDRVLVAMTDIRQEAEISPANARIEERAVDTVPAVTLTDFSKLGGRVAGRWIRKDTVI 164

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             + L  P VI  G  V +I     + +   G A+    IG  I V+N+ +G ++ G V+
Sbjct: 165 TPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRVRNVRSGKILRGKVI 224

Query: 143 DTGTVRV 149
           D  TV++
Sbjct: 225 DAETVQI 231


>gi|237810457|ref|YP_002894908.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei MSHR346]
 gi|237503791|gb|ACQ96109.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei MSHR346]
          Length = 509

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507


>gi|119899031|ref|YP_934244.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
           BH72]
 gi|119671444|emb|CAL95357.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
           BH72]
          Length = 256

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 5/145 (3%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
             + ++ Y+ +  S    V+G  +V +  + AG+++  + L       + +  N    + 
Sbjct: 116 SPVEWTAYLQARVS----VLGEYLVTAQPLRAGQIIGPADLVRRDGDLATLPDNTLTDVA 171

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
              G  TR  +     +   +L  P  + +G  V+++       +S+ G+AL++ + GD 
Sbjct: 172 QASGQYTRFAIAQGSPLRADMLRIPPAVRQGQTVQVVTVGSGFRVSSEGVALNNGAPGDP 231

Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150
           + V+ +  G +V+G+    G V V 
Sbjct: 232 VRVR-LGGGQVVTGAARAGGVVEVT 255


>gi|240139800|ref|YP_002964277.1| Flageller protein FlgA [Methylobacterium extorquens AM1]
 gi|240009774|gb|ACS41000.1| Flageller protein FlgA [Methylobacterium extorquens AM1]
          Length = 348

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A       V +  +N GE +  + L   +     +  +   +   VVG V +R L    V
Sbjct: 205 AVETREVAVLTRSLNRGEAVAGADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +  P +++RG  V I+     +++S  GIA     +G  ++V N  +  ++   V
Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324

Query: 142 VDTGTVRV 149
           +  G V V
Sbjct: 325 IAPGRVSV 332


>gi|327537338|gb|EGF24071.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula
           baltica WH47]
          Length = 476

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 51/123 (41%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV    +  G  +    +       + + G+    + +V+G+    ++     +  S  
Sbjct: 335 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 394

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             P ++ RG  V + ++ G + ++T   AL D +  ++I ++ +     +   VV+   V
Sbjct: 395 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 454

Query: 148 RVV 150
            +V
Sbjct: 455 EIV 457


>gi|304558587|gb|ADM41251.1| Flagellar basal-body P-ring formation protein FlgA [Edwardsiella
           tarda FL6-60]
          Length = 224

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    ++ G+ L  ++L+  +    ++       I  + G    R +     I
Sbjct: 97  QVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQPI 156

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G +V+I+       +S+ G A+++A++ DV+  +   +G ++SG   
Sbjct: 157 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 215

Query: 143 DTGTVRVVV 151
             GT+ +V+
Sbjct: 216 GPGTLTLVL 224


>gi|269138578|ref|YP_003295278.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella
           tarda EIB202]
 gi|267984238|gb|ACY84067.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella
           tarda EIB202]
          Length = 249

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V    ++ G+ L  ++L+  +    ++       I  + G    R +     I
Sbjct: 122 QVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQPI 181

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L R +VI  G +V+I+       +S+ G A+++A++ DV+  +   +G ++SG   
Sbjct: 182 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 240

Query: 143 DTGTVRVVV 151
             GT+ +V+
Sbjct: 241 GPGTLTLVL 249


>gi|126453246|ref|YP_001064560.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 1106a]
 gi|242316721|ref|ZP_04815737.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 1106b]
 gi|126226888|gb|ABN90428.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 1106a]
 gi|242139960|gb|EES26362.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 1106b]
          Length = 507

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 371 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 426

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 427 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 486

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 487 -MAAGQIVTAIVKDAATVEI 505


>gi|217424999|ref|ZP_03456495.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 576]
 gi|254196807|ref|ZP_04903231.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei S13]
 gi|169653550|gb|EDS86243.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei S13]
 gi|217392019|gb|EEC32045.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 576]
          Length = 509

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 429 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507


>gi|118581850|ref|YP_903100.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118504560|gb|ABL01043.1| SAF domain protein [Pelobacter propionicus DSM 2379]
          Length = 238

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 58/131 (44%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +    +   VV    IN G V+  + L   +   + ++G Y    +D VG   R  L P+
Sbjct: 107 VEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPN 166

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I    L +  +I  G  V II     M I+  G + S  + GD I V+N+ +   +  
Sbjct: 167 AAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPA 226

Query: 140 SVVDTGTVRVV 150
            V+D+ TV +V
Sbjct: 227 RVLDSTTVLIV 237


>gi|39936962|ref|NP_949238.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris CGA009]
 gi|39650819|emb|CAE29342.1| Flageller protein FlgA [Rhodopseudomonas palustris CGA009]
          Length = 342

 Score = 93.0 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  +   EV+  S +   +   S +  + A S    +G+  R+ L    V+  + L
Sbjct: 208 ATVLTRPVQRNEVIKVSDIVIERRPKSEVASD-AASRDAAIGMQARQTLRSGQVLRSADL 266

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P +++R   V +I     + ++  G AL   + GDV+ V N+ +   ++G+V+  G V
Sbjct: 267 AKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQV 326

Query: 148 RVVV 151
            + V
Sbjct: 327 AITV 330


>gi|167579483|ref|ZP_02372357.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           thailandensis TXDOH]
          Length = 209

 Score = 92.6 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 73  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 128

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIST G  L++A+ G  + V+
Sbjct: 129 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 188

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 189 -MAAGQIVTAIVKDAATVEI 207


>gi|126440298|ref|YP_001057318.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 668]
 gi|126219791|gb|ABN83297.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 668]
          Length = 509

 Score = 92.6 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507


>gi|15644289|ref|NP_229341.1| flagellar protein FlgA, putative [Thermotoga maritima MSB8]
 gi|4982108|gb|AAD36608.1|AE001800_18 flagellar protein FlgA, putative [Thermotoga maritima MSB8]
          Length = 286

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   +
Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P  + +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     
Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278

Query: 147 VRVV 150
           +R++
Sbjct: 279 LRIL 282


>gi|134283631|ref|ZP_01770330.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
 gi|134245040|gb|EBA45135.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
          Length = 509

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +       V     V +  I  GE L  + L       + +        +  VG
Sbjct: 373 WTIYLQAK----LVVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507


>gi|192292790|ref|YP_001993395.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Rhodopseudomonas palustris TIE-1]
 gi|192286539|gb|ACF02920.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
           palustris TIE-1]
          Length = 342

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  +   EV+  S +   +   S +  + A S    +G+  R+ L    V+  + L
Sbjct: 208 ATVLTRPVQRNEVIKVSDIVIERRPKSEVASD-AASRDAAIGMQARQTLRSGQVLRGADL 266

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P +++R   V +I     + ++  G AL   + GDV+ V N+ +   ++G+V+  G V
Sbjct: 267 AKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQV 326

Query: 148 RVVV 151
            + V
Sbjct: 327 AITV 330


>gi|295096229|emb|CBK85319.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 224

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +V I  G +L    +   +     +       I      V+ R + P 
Sbjct: 94  VAVQATGNYVVAAVPIPRGSLLQPDSVTLKRGRLDQLPPRTMLDINQAQEAVSLRDVAPG 153

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + +  G +V ++      +I++ G AL++A++     V+ + +G +VSG
Sbjct: 154 QAIQLSMLRQAWRVKAGQQVMVVANGEGFSINSEGKALNNAAVAQNARVR-MSSGQVVSG 212

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 213 TVGPDGNILI 222


>gi|257095363|ref|YP_003169004.1| flagella basal body P-ring formation protein FlgA [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047887|gb|ACV37075.1| flagella basal body P-ring formation protein FlgA [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 234

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV         V G  ++ +  + AG+++ +S +         +            G
Sbjct: 98  WTVYVPVQV----RVAGTYLLTARQLTAGQIVADSDVLMQGGDLGALPAGVLTDPAQARG 153

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              R  +     +   +L  P+ + +G  V+++ T    T+S  G AL++AS G V  V+
Sbjct: 154 KTVRSSVAAGQPLRGDLLIAPWSVQQGQSVKLVSTGTGFTVSNEGKALNNASEGQVAQVR 213

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG     G V V  
Sbjct: 214 -TASGQVVSGVARGLGIVEVTY 234


>gi|326404068|ref|YP_004284150.1| flagellar basal-body ring component protein [Acidiphilium
           multivorum AIU301]
 gi|325050930|dbj|BAJ81268.1| flagellar basal-body ring component protein [Acidiphilium
           multivorum AIU301]
          Length = 332

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 53/129 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A+     +V    +  GE++  + +K   V  + +         D +G+   R +     
Sbjct: 181 AAQAERVIVARRTLEPGEIVTINDVKMSWVARAALPQGTLTQAADALGMQVDRRIAAGTP 240

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +   V+ +  +++RGA V + +    + ++  G+AL+    G VI V N  +  +V   +
Sbjct: 241 LSKRVVAQVMMVNRGATVNLAVEMPGLEVTAEGVALAAGPKGAVIPVLNPSSHEVVQAVI 300

Query: 142 VDTGTVRVV 150
                  V+
Sbjct: 301 DGENHAHVI 309


>gi|221640824|ref|YP_002527086.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
           sphaeroides KD131]
 gi|221161605|gb|ACM02585.1| SAF domain precursor [Rhodobacter sphaeroides KD131]
          Length = 148

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 4/118 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  + A  +L    L                 +   +G   R  L     +  + L 
Sbjct: 20  VVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPVRAADLG 75

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
            P +I R   V +    G + I   G ALS   +GD I V N+ +   VSG + + G 
Sbjct: 76  PPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEVGR 133


>gi|75675313|ref|YP_317734.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
           winogradskyi Nb-255]
 gi|74420183|gb|ABA04382.1| flagellar protein FlgA [Nitrobacter winogradskyi Nb-255]
          Length = 380

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  ++   +L  S +   +   + + GN   S   VVG+ TRR +     +    L
Sbjct: 223 AAVLARDVDRNTLLKSSDIVIERRPRAEV-GNNPASRDHVVGMQTRRQMRAGQALHGIDL 281

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            RP ++ R   V +I     + ++  G A    + GDV++V N+ +   +SG VV  G V
Sbjct: 282 TRPDLVQRDQAVTLIYQTAGIYLTVRGKATESGTEGDVVSVLNLQSNRTISGVVVGRGQV 341

Query: 148 RV 149
            V
Sbjct: 342 SV 343


>gi|304397200|ref|ZP_07379079.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB]
 gi|304355349|gb|EFM19717.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB]
          Length = 219

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V + +++ G  ++ES           +      +   V   V  R + P 
Sbjct: 89  VQVQVTGSYLVANRLLSQGSSVSESDFTLQTGRLDTLPARALLNADSVADAVVLRDIQPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  S L +P+ +  G  V +I +      S  G AL++A+    + V+ +  G +VSG
Sbjct: 149 QPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQVVSG 207

Query: 140 SVVDTGTVRVVV 151
            V + G + + +
Sbjct: 208 KVREDGNILITL 219


>gi|84514783|ref|ZP_01002146.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
           vestfoldensis SKA53]
 gi|84510942|gb|EAQ07396.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
           vestfoldensis SKA53]
          Length = 237

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  AV     + +G+ +    L+   +   ++   Y   I+DVVG V  + L P   +  
Sbjct: 108 VTQAVFLRRPLRSGDRIQLDDLEIRPIDPLSVNNVYIT-IEDVVGRVLSQSLTPRVPVSP 166

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             L R + I+    V + +  G + I + GIAL    IGD I ++N+ +G  V G +   
Sbjct: 167 RHLQRDWAINADDIVTLQIVNGGIEIESPGIALEPGQIGDNIRLRNLSSGSEVIGRISQE 226

Query: 145 GTVRVVVK 152
             V+V+ K
Sbjct: 227 RKVQVISK 234


>gi|332531614|ref|ZP_08407511.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
 gi|332038977|gb|EGI75406.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
          Length = 288

 Score = 91.8 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           M CV+    +S+ +         V+G A V    + AG+ + +  L+  +V  +      
Sbjct: 144 MRCVQGATRWSVTLPVQV----QVMGSAWVLRANVPAGQAVTDQDLERREVDLAEDNSPV 199

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             +     G VT R L     +  ++     V + GA+VR+++      IS  G ALS  
Sbjct: 200 LAT-DAWEGQVTSRGLRAGQTLRQNMFRAAKVFTSGAQVRVLVQGSGFQISAPGRALSVG 258

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +G +  V+ ++ G +++ +VVD  TVRV
Sbjct: 259 VVGQLAQVR-MENGRVMNATVVDARTVRV 286


>gi|222447129|pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From
           Thermotoga Maritima Msb8
          Length = 278

 Score = 91.8 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   +
Sbjct: 144 NVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 203

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P  + +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     
Sbjct: 204 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 263

Query: 147 VRVV 150
           +R++
Sbjct: 264 LRIL 267


>gi|298529925|ref|ZP_07017327.1| flagella basal body P-ring formation protein FlgA
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509299|gb|EFI33203.1| flagella basal body P-ring formation protein FlgA
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 327

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 2/128 (1%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +F  V          +N G+V+    ++  +   + IR               R  +   
Sbjct: 199 VFVDVWVTVACAERPLNRGDVIEPGDVRFEEKNLAYIRREVWDGESGP--WRIRSSIGQG 256

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I    L    ++SRGAKV ++    ++T+   G  L D   GD I V+N+ +   V  
Sbjct: 257 QPIYKRHLEPVPMVSRGAKVDMVYEGNHLTLVVPGEVLEDGQRGDRIMVRNMQSEKEVRA 316

Query: 140 SVVDTGTV 147
           +V  +G V
Sbjct: 317 TVESSGRV 324


>gi|148270381|ref|YP_001244841.1| SAF domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147735925|gb|ABQ47265.1| SAF domain [Thermotoga petrophila RKU-1]
          Length = 280

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   +
Sbjct: 153 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 212

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P  + +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     
Sbjct: 213 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 272

Query: 147 VRVV 150
           +R++
Sbjct: 273 LRIL 276


>gi|254295810|ref|ZP_04963267.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
 gi|157806317|gb|EDO83487.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
          Length = 495

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 359 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 414

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 415 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 474

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 475 -MAAGQIVTAIVKDAATVEI 493


>gi|94987184|ref|YP_595117.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00]
 gi|94731433|emb|CAJ54796.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00]
          Length = 327

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 30  VPSV--VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRRVLLPDHVIP 83
           VPSV   +N G+ +N   +  +    + +R +         G       +R +     I 
Sbjct: 207 VPSVGKPLNRGDYVNPEDVTWINKNIAFLRDDIWD------GKGGPWQIKRSIGIGQPIY 260

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            S L    V+ +G  +++   +G++ +S    AL + + G  I V+N+ +  +V  +VVD
Sbjct: 261 QSDLEPLAVVRKGDIIKLNYNKGSIRLSVNVEALENGTHGSFIQVRNLQSKKIVHATVVD 320

Query: 144 TGTVRV 149
           + TV +
Sbjct: 321 SNTVEI 326


>gi|89056683|ref|YP_512134.1| flagellar basal body P-ring biosynthesis protein FlgA [Jannaschia
           sp. CCS1]
 gi|88866232|gb|ABD57109.1| flagellar basal-body P-ring formation protein FlgA [Jannaschia sp.
           CCS1]
          Length = 140

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 6/140 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +   +L+L S   +V    V+ +  I    ++  + +  +              I   +G
Sbjct: 3   WVFLILALAS--PAVAQETVIAAGTIRGATMIGPADVAVVDGETP----GALSDIYQAIG 56

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +  R  L P   I    L  P ++ R   V +    G + + T G AL  A+ G+ + V 
Sbjct: 57  MEARINLYPGRPIRPGDLRAPAIVERNEIVSLRYNYGGLLVMTEGRALDRAAAGEALRVI 116

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +   V+ +    G V V
Sbjct: 117 NLASRQTVTATATGPGLVTV 136


>gi|162218050|ref|YP_622284.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           cenocepacia AU 1054]
 gi|162227931|ref|YP_836667.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           cenocepacia HI2424]
          Length = 310

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L+ + L       + +           +G
Sbjct: 174 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 229

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++      TIS  G  L++A+ G  + V+
Sbjct: 230 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 289

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D GTV +
Sbjct: 290 -MAAGQIVTAIVKDAGTVEI 308


>gi|311105931|ref|YP_003978784.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           xylosoxidans A8]
 gi|310760620|gb|ADP16069.1| flagella basal body P-ring formation protein FlgA [Achromobacter
           xylosoxidans A8]
          Length = 237

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++ YV +  S    V GH  V + +I AG+ L    L         +        + V G
Sbjct: 101 WTAYVQATVS----VPGHYYVAARLIAAGQALTPDDLAPRDGDLIALPPGAITDPQAVAG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           +     +     +  S L     + RGA VRI        +S+ G AL +A+ G  + V+
Sbjct: 157 MTAVHRINAGQAVRSSGLRNAQSVLRGANVRINARGKGFVVSSEGQALDNAAPGATVQVR 216

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G +VSG V +   V + +
Sbjct: 217 -TAGGQVVSGVVRNASLVEIQL 237


>gi|167822313|ref|ZP_02453784.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 9]
          Length = 218

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 82  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 137

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 138 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 197

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 198 -MAAGQIVTAIVKDAATVEI 216


>gi|167900902|ref|ZP_02488107.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei NCTC 13177]
          Length = 224

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 88  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 143

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 144 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 203

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 204 -MAAGQIVTAIVKDAATVEI 222


>gi|170288993|ref|YP_001739231.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
           RQ2]
 gi|170176496|gb|ACB09548.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
           RQ2]
          Length = 286

 Score = 91.5 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   +
Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P  + +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     
Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278

Query: 147 VRVV 150
           +R++
Sbjct: 279 LRIL 282


>gi|167843903|ref|ZP_02469411.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei B7210]
          Length = 222

 Score = 91.5 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 86  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 141

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 142 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 201

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 202 -MAAGQIVTAIVKDAATVEI 220


>gi|254261371|ref|ZP_04952425.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 1710a]
 gi|76579771|gb|ABA49246.1| flagella basal body P-ring formation protein FlgA, putative
           [Burkholderia pseudomallei 1710b]
 gi|254220060|gb|EET09444.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 1710a]
          Length = 509

 Score = 91.5 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 429 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507


>gi|83747658|ref|ZP_00944694.1| FlgA [Ralstonia solanacearum UW551]
 gi|207739741|ref|YP_002258134.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum IPO1609]
 gi|83725710|gb|EAP72852.1| FlgA [Ralstonia solanacearum UW551]
 gi|206593123|emb|CAQ60029.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum IPO1609]
          Length = 295

 Score = 91.5 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  I  G  V+++   G   +++ G AL+ A++G 
Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG     G V V
Sbjct: 270 VAQVR-TANGNVISGIAQSPGVVAV 293


>gi|254292904|ref|YP_003058927.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica
           ATCC 49814]
 gi|254041435|gb|ACT58230.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica
           ATCC 49814]
          Length = 249

 Score = 91.5 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYVI 93
           ++ G+V++   L  +    + +R     ++K  +VG   +R +       +S +H P +I
Sbjct: 131 MSRGDVVSAEDLIWIPAPENRLRPTGTPNLKSNIVGKELKRSVRAQTAFRISDVHTPALI 190

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +G  V +   +G + +S  G AL DA+    I V N  +   +   V   G  RV+
Sbjct: 191 RKGDPVTLTYLKGALRLSVDGKALMDAAQDAPIRVLNNYSKRTIDAIVSGAGEARVL 247


>gi|167736698|ref|ZP_02409472.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 14]
          Length = 221

 Score = 91.5 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 85  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 140

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 141 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 200

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 201 -MAAGQIVTAIVKDAATVEI 219


>gi|281412687|ref|YP_003346766.1| flagella basal body P-ring formation protein FlgA [Thermotoga
           naphthophila RKU-10]
 gi|281373790|gb|ADA67352.1| flagella basal body P-ring formation protein FlgA [Thermotoga
           naphthophila RKU-10]
          Length = 286

 Score = 91.5 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  ++  +     I G     + +VVG ++RR L    V+   +
Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +  P  + +G  V   +  G++ ++T    L +  +G+ +   N+++   V G V     
Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278

Query: 147 VRVV 150
           +R++
Sbjct: 279 LRIL 282


>gi|146311242|ref|YP_001176316.1| flagellar basal body P-ring biosynthesis protein FlgA [Enterobacter
           sp. 638]
 gi|145318118|gb|ABP60265.1| SAF domain [Enterobacter sp. 638]
          Length = 219

 Score = 91.5 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  I  G VL  + ++  +     +       I      V+ R L P 
Sbjct: 89  VNVQATGNYVVAAQPIARGSVLQTTSVELKRGRLDQLPPRTMLDINQAQDSVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + +  G +V +I      ++++ G AL++A++     V+ + +G +VSG
Sbjct: 149 QAIQLSMLRQAWRVKAGQRVMVIANGDGFSVNSEGQALNNAAVAQNARVR-MSSGQVVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVGSDGIILI 217


>gi|290474968|ref|YP_003467852.1| basal-body periplasmic P ring assembly protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174285|emb|CBJ81075.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Xenorhabdus bovienii SS-2004]
          Length = 223

 Score = 91.5 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 61/135 (45%), Gaps = 1/135 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              ++  V G  ++ +  I    VL E   +        +  +   + K +   +  R +
Sbjct: 90  FIQVYVGVTGSYLMSNRAIQRNTVLTEKDFQVKTGALDKLPNDIIRNRKVIQNGIAIRNI 149

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                I  +++ RP+ I  G  V +I+   +  +   G A+++A+  D I V+ + +G +
Sbjct: 150 PAGQFITRNMIRRPWAIRAGQNVVVIVDGHHFQVRYEGKAINNAASFDNIRVR-LASGQV 208

Query: 137 VSGSVVDTGTVRVVV 151
           ++G   + G+V++++
Sbjct: 209 ITGETQENGSVKMML 223


>gi|238028853|ref|YP_002913084.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           glumae BGR1]
 gi|237878047|gb|ACR30380.1| Flagellar basal body P-ring formation protein FlgA [Burkholderia
           glumae BGR1]
          Length = 510

 Score = 91.1 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LY+ S       V G+  V +  +  G+VL  + L   +   + +           VG
Sbjct: 374 WTLYLQSKI----EVQGNYYVAAHALAPGDVLTAADLVAHEGDLTMLPLAVITDPAQAVG 429

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             +   +     +   +L     ++ G  VR++      +IS+ G  +++A  G  + V+
Sbjct: 430 GTSLVRVAAGLPLRQDMLRSASSVTIGQTVRVVAAGQGFSISSEGSVMNNAGPGQQVRVR 489

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV V
Sbjct: 490 -LAAGQIVTAVVKDGNTVEV 508


>gi|283784868|ref|YP_003364733.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168]
 gi|282948322|emb|CBG87905.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168]
          Length = 219

 Score = 91.1 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  I  G  L  + +   +     +       I  +   V+ R L P 
Sbjct: 89  VNVQATGNYVVAAAPITRGSKLTPASIALKRGRLDQLPPRTILDINQIQEAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L++L + + I  G +V ++      +++  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPVQLNMLRQDWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVR-MLSGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 IVDADGNILI 217


>gi|222100098|ref|YP_002534666.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
 gi|221572488|gb|ACM23300.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
          Length = 287

 Score = 91.1 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 61/124 (49%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV    IN G+V+ E  +   +     I G   +++ +VVG+V++R L    V+  ++
Sbjct: 160 NVVVLKRNINVGDVIKEDFVTVEERDIFEINGEPFYNVSEVVGMVSKRYLRSGTVLTKNM 219

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L  P  + +G  V   +  G++ +ST    L +  +G+ +   N+++   V G V     
Sbjct: 220 LEHPPDVVKGQIVPAYVDLGSIKVSTFVEILENGHLGETVKAMNVESRKYVFGRVEKGPV 279

Query: 147 VRVV 150
           +R++
Sbjct: 280 LRIL 283


>gi|226944488|ref|YP_002799561.1| flagellar protein FlgA [Azotobacter vinelandii DJ]
 gi|226719415|gb|ACO78586.1| Flagellar protein FlgA [Azotobacter vinelandii DJ]
          Length = 231

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 1/125 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           ++G   +    I  GE +    L   +     +  N A +  +++G+   R +       
Sbjct: 105 ILGEYAIARRAIEPGETVEADMLAMRRGRLERLPRNAAITTDEILGMQATRAIAEGSTFQ 164

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            S L  P +I R A+V +        IS    AL   ++  ++ V+  + G ++ G VV 
Sbjct: 165 RSALRAPELIERNAQVVLEARGPGFVISRKATALDSGALDSLVRVR-TEAGEILRGRVVG 223

Query: 144 TGTVR 148
              ++
Sbjct: 224 RNRLQ 228


>gi|207728342|ref|YP_002256736.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum MolK2]
 gi|206591588|emb|CAQ57200.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum MolK2]
          Length = 295

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  I  G  V+++   G   +++ G AL+ A++G 
Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG     G V V
Sbjct: 270 VAQVR-TANGNVISGIAQSPGVVAV 293


>gi|167917159|ref|ZP_02504250.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei BCC215]
          Length = 232

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 96  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 151

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 152 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 211

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 212 -MAAGQIVTAIVKDAATVEI 230


>gi|300311348|ref|YP_003775440.1| flagellar basal body P-ring formation protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074133|gb|ADJ63532.1| flagellar basal body P-ring formation protein [Herbaspirillum
           seropedicae SmR1]
          Length = 254

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +       VI   ++ +V +  G+ ++ S +  ++   S +          V+G
Sbjct: 118 WTIYVRANV----QVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIG 173

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    L     + +  +    V+ +G  VR++       IST   ALS+A+ G +   +
Sbjct: 174 RVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQAR 233

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
               G +VSG     G + +
Sbjct: 234 -TAAGQVVSGIAKAGGILEI 252


>gi|89902473|ref|YP_524944.1| flageller protein FlgA [Rhodoferax ferrireducens T118]
 gi|89347210|gb|ABD71413.1| Flageller protein FlgA [Rhodoferax ferrireducens T118]
          Length = 246

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 5/148 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+   + +++++      +    G A V    ++AG  L +  + E +V  +  R   
Sbjct: 101 LRCLEGSVKWNVFLPVTIKAY----GQAWVVKGQVSAGAALTQDDVMEAEVDWAEQREAI 156

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             +    +G V  R L     +   ++    V   GA++R+ +      I++ G ALS  
Sbjct: 157 ISNPDQWLGQVANRALTSGQALRQGMIRPAEVFRAGAQIRVQVQGAGFEITSDGQALSAG 216

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            +G    VK ++ G ++SG V+D+ TVR
Sbjct: 217 VVGQPARVK-MNNGHVMSGEVLDSRTVR 243


>gi|218549200|ref|YP_002382991.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           fergusonii ATCC 35469]
 gi|218356741|emb|CAQ89369.1| Flagella basal body P-ring formation protein flgA precursor
           [Escherichia fergusonii ATCC 35469]
          Length = 236

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  I  G V+N S +   +     +       +  V   ++ R + P 
Sbjct: 106 VNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPG 165

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L++L + + I  G +V++I       ++  G AL++A++     V+ + +G +VSG
Sbjct: 166 QPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSG 224

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 225 IVGADGNILI 234


>gi|258404728|ref|YP_003197470.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
           retbaense DSM 5692]
 gi|257796955|gb|ACV67892.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
           retbaense DSM 5692]
          Length = 326

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 1/121 (0%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V     ++   ++  S L+      S +           VG    R +    V+  SVL 
Sbjct: 205 VTARRNLDRESIVQASDLRRESRQLSRLDDPVY-EASVAVGQRVVRSVRAGEVLDRSVLA 263

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++ RG  V +   +G + I+ +G+A  D  + + I V+N  TG  + G+VV   TVR
Sbjct: 264 APILVQRGKPVTLEAVRGALVITASGVAQEDGGLQETIRVENRRTGKEIFGTVVSADTVR 323

Query: 149 V 149
           V
Sbjct: 324 V 324


>gi|307546972|ref|YP_003899451.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas
           elongata DSM 2581]
 gi|307218996|emb|CBV44266.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas
           elongata DSM 2581]
          Length = 235

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 1/122 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SVIG  +  +  + AGE +    L       + +           +G V  R L    V+
Sbjct: 108 SVIGAYLETARDVAAGETITRDHLVIRHGNLARLPRQTLREAGQAIGRVAMRPLSEGQVL 167

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               L +P ++ RG  V +        ++    AL+    GD I V+ +D   ++   VV
Sbjct: 168 RGYQLRKPRLVQRGEAVTLEARGSGFRVTRPAEALAPGGRGDRIRVR-LDNREILHARVV 226

Query: 143 DT 144
             
Sbjct: 227 GE 228


>gi|159045793|ref|YP_001534587.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Dinoroseobacter shibae DFL 12]
 gi|157913553|gb|ABV94986.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Dinoroseobacter shibae DFL 12]
          Length = 141

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 9/142 (6%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R+L+  SL VL      A      +V +  I A  +L    L     +            
Sbjct: 3   RWLIL-SLAVLMGVPAAAE----TLVAARTIRAQAILTAEDLNLTPGSTP----GALSRP 53

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
           ++ +GL +R +L     I    +  P ++ R   V ++     M I+T G AL  A +G+
Sbjct: 54  EEAIGLESRVILYAGRPILADQVGPPALVERNELVSLVYATPFMRIATEGRALGRAGLGE 113

Query: 125 VIAVKNIDTGVMVSGSVVDTGT 146
            + V NI +   V   V   G 
Sbjct: 114 SLRVLNISSKTTVRARVTGPGQ 135


>gi|167892405|ref|ZP_02479807.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 7894]
          Length = 220

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 84  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 139

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 140 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 199

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 200 -MAAGQIVTAIVKDAATVEI 218


>gi|167813796|ref|ZP_02445476.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 91]
          Length = 211

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 75  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 130

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 131 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 190

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 191 -MAAGQIVTAIVKDAATVEI 209


>gi|52427983|gb|AAU48576.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei ATCC 23344]
          Length = 251

 Score = 91.1 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 115 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 170

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 171 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 230

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 231 -MAAGQIVTAIVKDAATVEI 249


>gi|58039416|ref|YP_191380.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Gluconobacter oxydans 621H]
 gi|58001830|gb|AAW60724.1| Flagella basal body P ring formation protein FlgA [Gluconobacter
           oxydans 621H]
          Length = 330

 Score = 90.7 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 57/124 (45%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            AV     ++ G+ +    +    V    I  +   S +D VGL  R VL    V+ +S 
Sbjct: 185 RAVTLRHAMHLGQPILPEDVTMTFVRIGLIPDDALQSPEDAVGLEARGVLAAGQVLSVSE 244

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L  P ++ RG+ V    +  ++ ++ +G  L     GD + V N  + ++++G VVD   
Sbjct: 245 LAHPQLVHRGSPVVATFSGPSLHLTVSGTVLEAGGKGDTVHVYNASSRMVLTGRVVDRTE 304

Query: 147 VRVV 150
           V V+
Sbjct: 305 VEVI 308


>gi|291613034|ref|YP_003523191.1| flagella basal body P-ring formation protein FlgA [Sideroxydans
           lithotrophicus ES-1]
 gi|291583146|gb|ADE10804.1| flagella basal body P-ring formation protein FlgA [Sideroxydans
           lithotrophicus ES-1]
          Length = 238

 Score = 90.7 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +S++V +       V    +V S  +    VL+ S  +         +       +  +G
Sbjct: 103 WSIFVQADI----KVTVDMLVASRPLAQNTVLSASDFRLQNGELG--QPGILIDPQQAIG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              R  +    V+   +L  PYV+ +G    + +      +S  G AL++ + G  + V+
Sbjct: 157 KTLRFPIGAGQVLRQDMLRAPYVVIQGKTTSVRVKDTGFYVSATGQALNNGAEGQNVQVR 216

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            + +G +V G+    G+V V
Sbjct: 217 -MYSGQVVIGTAAADGSVEV 235


>gi|167567650|ref|ZP_02360566.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           oklahomensis EO147]
          Length = 225

 Score = 90.7 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I+ GE L+ + L       + +         + VG
Sbjct: 89  WTIYLQAK----LAVQATYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 144

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 145 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 204

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 205 -MAAGQIVTAIVKDAATVEI 223


>gi|322832560|ref|YP_004212587.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
           Y9602]
 gi|321167761|gb|ADW73460.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
           Y9602]
          Length = 260

 Score = 90.7 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G   V +  + AG  L ++ +++       +        +  V  +T R +     +
Sbjct: 133 QVSGTYWVAAKNVPAGAHLTQTDMQQKTGRLDLLPPKTILDSQQAVNGITLRNISIGQPL 192

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            LS+L RP+++  G +V++  T     +S+AG A+++A+  + + ++ + +G +V+G+V 
Sbjct: 193 TLSMLRRPWMVHAGQEVQVQATGSGFNVSSAGKAMNNAAANESVRIR-MPSGAIVNGTVG 251

Query: 143 DTGTVRVVV 151
             G+V V +
Sbjct: 252 SDGSVTVTI 260


>gi|260597441|ref|YP_003210012.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter
           turicensis z3032]
 gi|260216618|emb|CBA29909.1| Flagella basal body P-ring formation protein flgA [Cronobacter
           turicensis z3032]
          Length = 201

 Score = 90.7 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV S  +  G  LNES L+  +     +  N   ++      VT R L P+
Sbjct: 71  VNVQAFGNYVVASQPVARGGTLNESNLRLERGRLDLLPPNAMLNLDQAREAVTLRDLAPN 130

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + LS++ + + +  G +V+II      +I+  G AL++A++     V+ + +G +VSG
Sbjct: 131 QPVMLSMVRQSWRVKAGQQVQIIANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSG 189

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 190 IVGSDGIILI 199


>gi|170747257|ref|YP_001753517.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653779|gb|ACB22834.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           radiotolerans JCM 2831]
          Length = 379

 Score = 90.7 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 60/125 (48%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +    V +  +N GE + E  +   Q    ++  +   S+  ++G V +  L+   V+ +
Sbjct: 234 LREVAVLTRNLNRGEPVKEGDVALEQRPRDSVAPDAQGSVTTILGEVAQNTLMAGTVLRV 293

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           +    P +++RG  V I+    ++++S  G++     +G V+ V N+ +  ++  +V+  
Sbjct: 294 TDTAPPELVARGETVTIVYETPSISLSMRGLSNDSGRMGAVVNVINVASKKILQATVIGP 353

Query: 145 GTVRV 149
           G V V
Sbjct: 354 GRVSV 358


>gi|291085566|ref|ZP_06353375.2| flagella basal body P-ring formation protein FlgA [Citrobacter
           youngae ATCC 29220]
 gi|291071317|gb|EFE09426.1| flagella basal body P-ring formation protein FlgA [Citrobacter
           youngae ATCC 29220]
          Length = 267

 Score = 90.7 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  +  G  L  + +   +     +       +  V   V+ R L+P 
Sbjct: 137 VNVQATGNYVVAAAPVARGSALTPASVTLKRGRLDQLPPRAVLDLNQVQDAVSLRDLVPG 196

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + I  G +V +I       ++  G AL++A++     V+ + +G +VSG
Sbjct: 197 QPIQLSMLRQAWRIKAGQRVLVIANGEGFRVNAEGKALNNAAVAQNARVR-MISGQVVSG 255

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 256 VVDSDGNILI 265


>gi|167574682|ref|ZP_02367556.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           oklahomensis C6786]
          Length = 229

 Score = 90.3 bits (223), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I+ GE L+ + L       + +         + VG
Sbjct: 93  WTIYLQAK----LAVQATYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 148

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 149 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 208

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 209 -MAAGQIVTAIVKDAATVEI 227


>gi|67641534|ref|ZP_00440311.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei GB8 horse 4]
 gi|121598829|ref|YP_994286.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           mallei SAVP1]
 gi|124385761|ref|YP_001028065.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           mallei NCTC 10229]
 gi|161579515|ref|YP_104793.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           mallei ATCC 23344]
 gi|167001531|ref|ZP_02267326.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei PRL-20]
 gi|121227639|gb|ABM50157.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei SAVP1]
 gi|238522484|gb|EEP85928.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei GB8 horse 4]
 gi|243062733|gb|EES44919.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           mallei PRL-20]
          Length = 254

 Score = 90.3 bits (223), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 174 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252


>gi|161723214|ref|YP_106896.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei K96243]
          Length = 254

 Score = 90.3 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 174 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252


>gi|226199833|ref|ZP_03795384.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei Pakistan 9]
 gi|225928184|gb|EEH24220.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei Pakistan 9]
          Length = 295

 Score = 90.3 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 159 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 214

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 215 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 274

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 275 -MAAGQIVTAIVKDAATVEI 293


>gi|253996323|ref|YP_003048387.1| flagella basal body P-ring formation protein FlgA [Methylotenera
           mobilis JLW8]
 gi|253983002|gb|ACT47860.1| flagella basal body P-ring formation protein FlgA [Methylotenera
           mobilis JLW8]
          Length = 265

 Score = 90.3 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 5/142 (3%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            +++Y  +  +    V+   +V +V +  G V+    L       + +       +    
Sbjct: 128 AWTIYAQATVN----VVAQYLVAAVPLAQGRVVTADDLLFQSGDLTQLPAGIFTDLAQAQ 183

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G +    +    V+   +L    V+ +G  V +  +     +S  G A++ A+ G V+ V
Sbjct: 184 GRIVNISMTAGTVLRQEMLKVSPVVQQGQTVMVTSSGKGFRVSAEGKAMTKANEGQVVQV 243

Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
           K + +G +VSG     G V VV
Sbjct: 244 K-VASGQVVSGIARQGGQVEVV 264


>gi|300696909|ref|YP_003747570.1| assembly protein for flagellar basal-body periplasmic P ring
           [Ralstonia solanacearum CFBP2957]
 gi|299073633|emb|CBJ53153.1| assembly protein for flagellar basal-body periplasmic P ring
           [Ralstonia solanacearum CFBP2957]
          Length = 295

 Score = 90.3 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  I  G  V+++   G   +++ G AL+ A++G 
Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG    TG V V
Sbjct: 270 VAQVR-TANGNVISGIAQSTGVVAV 293


>gi|52208324|emb|CAH34257.1| putative flagella basal body P-ring formation protein [Burkholderia
           pseudomallei K96243]
          Length = 307

 Score = 90.3 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 171 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 226

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 227 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 286

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 287 -MAAGQIVTAIVKDAATVEI 305


>gi|17548562|ref|NP_521902.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
           solanacearum GMI1000]
 gi|17430810|emb|CAD17492.1| putative flagella basal body p-ring formation protein [Ralstonia
           solanacearum GMI1000]
          Length = 295

 Score = 90.3 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVILQP 209

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  +  G  V+++   G   +++ G AL+ A++G 
Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG     G V V
Sbjct: 270 VAQVR-TANGNVISGIAQSAGVVAV 293


>gi|157146230|ref|YP_001453549.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
           koseri ATCC BAA-895]
 gi|157083435|gb|ABV13113.1| hypothetical protein CKO_01987 [Citrobacter koseri ATCC BAA-895]
          Length = 219

 Score = 89.9 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  +  G  L  + +   +     +       I  +   V+ R L+P 
Sbjct: 89  VNVQATGNYVVAAAPVARGGALGPANITLKRGRLDQLPPRTVLDINQIQDAVSLRDLVPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + I  G +V ++      +++  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLSMLRQAWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVR-MLSGQVVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDPDGNILI 217


>gi|310816832|ref|YP_003964796.1| flagella basal body P-ring formation protein FlgA
           [Ketogulonicigenium vulgare Y25]
 gi|308755567|gb|ADO43496.1| flagella basal body P-ring formation protein FlgA
           [Ketogulonicigenium vulgare Y25]
          Length = 138

 Score = 89.9 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 4/129 (3%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
            +     VV    + A  ++    L                   +++GL  R  +     
Sbjct: 13  GTAQADYVVAQRNLPANGIITADLLGLRPGEVP----GAITDPSEIIGLEARTPIYAGRP 68

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +  S   +P ++ R   + +  T+G +TI   G AL  A  GD+I V N+ +   +   +
Sbjct: 69  LQASQFGQPAIVQRNQVIAMQFTRGALTIMAEGRALERAGPGDLIRVMNLQSRTTIMARI 128

Query: 142 VDTGTVRVV 150
              GT  V 
Sbjct: 129 GVEGTAYVT 137


>gi|85706166|ref|ZP_01037261.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. 217]
 gi|85669330|gb|EAQ24196.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseovarius sp. 217]
          Length = 139

 Score = 89.5 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 9/140 (6%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVG 69
           L    +  +    +   VV +  I A EVL  + L           G     +   D++G
Sbjct: 5   LTSFLMLIIANPALADMVVATRTIRAQEVLGPADLLLK-------PGEGISDVTLHDLIG 57

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
              R  L P   I    +  P VI R   V ++     + I T G +LS A +GD + V 
Sbjct: 58  QEVRVALYPGRQIRAVDVGPPTVIERNQIVPLVYAHSGLRIETEGRSLSRAGVGDYVRVM 117

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +   VSG V  TG + V
Sbjct: 118 NLASRATVSGRVTQTGHILV 137


>gi|309779443|ref|ZP_07674204.1| flagella basal body p-ring formation protein [Ralstonia sp.
           5_7_47FAA]
 gi|308921684|gb|EFP67320.1| flagella basal body p-ring formation protein [Ralstonia sp.
           5_7_47FAA]
          Length = 268

 Score = 89.5 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V S  ++ G+ L+   L+      S +  +     
Sbjct: 127 RSPHAWAAWVPATI----QITGTYYVASHQLSPGKTLDLGDLEARTGDLSTLPASVVQQP 182

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            DVVG V    +  +  +    L  P  +  G  V++I   G   +S+ G AL+ A++G 
Sbjct: 183 ADVVGHVLLTSVAANQPLRAESLRLPMAVQAGQTVKLIAEGGGFQVSSDGRALNQAAVGQ 242

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G +VSG     G V +
Sbjct: 243 VAQVR-TANGNVVSGIAQSAGVVAI 266


>gi|237653587|ref|YP_002889901.1| flagella basal body P-ring formation protein FlgA [Thauera sp.
           MZ1T]
 gi|237624834|gb|ACR01524.1| flagella basal body P-ring formation protein FlgA [Thauera sp.
           MZ1T]
          Length = 242

 Score = 89.5 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 64/142 (45%), Gaps = 5/142 (3%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
             + ++ Y+ +      +V+   ++ +  + AG+VL  + L + +   + +  N      
Sbjct: 102 SPVTWTAYLQARV----AVVADYLIAARPLRAGQVLGPADLGQRRGDLTALPDNLLTDPT 157

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
              G  TR  +     +   +L  P+ + +G  V ++       +++ G A+++A+ G+ 
Sbjct: 158 QASGHHTRIAVAAGSPLRGDMLRVPHAVRQGQTVSVLGVGAGFRVASEGRAMNNAAPGEK 217

Query: 126 IAVKNIDTGVMVSGSVVDTGTV 147
           + V+ +  G +V+G+    G V
Sbjct: 218 VRVR-LADGQVVTGTAQAGGAV 238


>gi|85058007|ref|YP_453709.1| flagellar basal body P-ring formation protein FlgA [Sodalis
           glossinidius str. 'morsitans']
 gi|84778527|dbj|BAE73304.1| flagellar basal body P-ring formation protein FlgA [Sodalis
           glossinidius str. 'morsitans']
          Length = 238

 Score = 89.5 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 1/128 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +  S  G   V +  + +G  L    +       +    N   + + V G +T R +   
Sbjct: 97  IKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAG 156

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +  ++L  P+ + +G  V ++       +   G A+SDA++GD + V+ + +G MVSG
Sbjct: 157 QPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVR-LASGQMVSG 215

Query: 140 SVVDTGTV 147
           +V + G V
Sbjct: 216 AVDNQGVV 223


>gi|300693333|ref|YP_003749306.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum PSI07]
 gi|299075370|emb|CBJ34665.1| flagella basal body p-ring formation protein [Ralstonia
           solanacearum PSI07]
          Length = 293

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 152 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSILPASVVQQP 207

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  +  G  V+++   G   +++ G AL+ A++G 
Sbjct: 208 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQ 267

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG     G V V
Sbjct: 268 VAQVR-TANGNVISGIAQSVGVVAV 291


>gi|167645395|ref|YP_001683058.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
           K31]
 gi|167347825|gb|ABZ70560.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
           K31]
          Length = 247

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  + AGE++    L  ++V  S    +      D++G+  +R L       L  +  P 
Sbjct: 112 ARSLAAGEIVQPEDLVWVKVAAS--PSDSPRDADDLIGMTAKRPLRQGATASLRDVSTPQ 169

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           VI  G  V +    G + +S  G A+++ ++G+ + V+N  +  ++   V   G+  V
Sbjct: 170 VIKAGDIVAVTYEDGGVALSLQGKAMANGAVGESLMVQNTASKKIIETVVTGPGSTAV 227


>gi|312968855|ref|ZP_07783062.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           2362-75]
 gi|312286257|gb|EFR14170.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           2362-75]
          Length = 192

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 62  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 121

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 122 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 180

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 181 VVDADGNILI 190


>gi|167909120|ref|ZP_02496211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 112]
          Length = 214

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 78  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 133

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 134 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 193

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 194 -MAAGQIVTAIVKDAATVEI 212


>gi|195952533|ref|YP_002120823.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195932145|gb|ACG56845.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 235

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V   +I  G+++ +  +K        +  N   S + V+G    + +     I  S+
Sbjct: 107 PVIVAKKLITRGQIITKDDIKSAVKYIRFVPQNLVVSKRQVIGATALQNIGIGEPIRTSM 166

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM-VSGSVVDTG 145
           +    +I  G  VR+I   G + I+T   A+ +  +G  + ++ +      + G V+D  
Sbjct: 167 ISMVPIIRYGDIVRVIYDNGYIRITTKAKAMQNGYLGKFVRLQPLGNQKTFIVGKVIDKD 226

Query: 146 TVRV 149
           TV +
Sbjct: 227 TVLI 230


>gi|237731003|ref|ZP_04561484.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
           sp. 30_2]
 gi|226906542|gb|EEH92460.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
           sp. 30_2]
          Length = 219

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  +  G  L  + +   +     +       +  V   V+ R L+P 
Sbjct: 89  VNVQATGNYVVAAASVARGSTLTPASVTLKRGRLDQLPPRAVLDMSQVQDAVSLRDLVPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I LS+L + + I  G +V +I       ++  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLSMLRQAWRIKAGQRVLVIANGDGFRVNAEGKALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDSDGNILI 217


>gi|299068728|emb|CBJ39967.1| assembly protein for flagellar basal-body periplasmic P ring
           [Ralstonia solanacearum CMR15]
          Length = 295

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V +  +  G+ L+   L+      S +  +     
Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAAHQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            D VG V    L P+  +    L  P  +  G  V+++   G   +S+ G AL+ A++G 
Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVSSDGRALNQAAVGQ 269

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G ++SG     G V V
Sbjct: 270 VAQVR-TANGNVISGIAQSAGVVAV 293


>gi|331646330|ref|ZP_08347433.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           M605]
 gi|281178181|dbj|BAI54511.1| flagellar basal body P-ring protein FlgA precursor [Escherichia
           coli SE15]
 gi|330910886|gb|EGH39396.1| flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli AA86]
 gi|331045082|gb|EGI17209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           M605]
          Length = 219

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|215486281|ref|YP_002328712.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O127:H6 str. E2348/69]
 gi|218689025|ref|YP_002397237.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli ED1a]
 gi|215264353|emb|CAS08710.1| assembly protein for flagellar basal-bodyperiplasmic P ring
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218426589|emb|CAR07417.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli ED1a]
 gi|320196446|gb|EFW71069.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli WV_060327]
          Length = 219

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|254460877|ref|ZP_05074293.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium HTCC2083]
 gi|206677466|gb|EDZ41953.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 141

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 4/143 (2%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
           ++  +  +  L    A +     + +  I  GEV++ + +  ++   S        S   
Sbjct: 1   MILRAFPIALLLITSAPISAEVAIAARNIRPGEVMSVTDVMVIRGEAS----GAFKSADL 56

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +VG   +  L    VI  S +     + R   V I  +   +++ST G AL   S G  I
Sbjct: 57  IVGAEAKVALYAGRVILTSQIVPAASVQRNQIVEIRFSSNGLSMSTDGRALGRGSAGQRI 116

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V N+ +   + G++   G+VRV
Sbjct: 117 RVMNLASKTSIFGTIQSDGSVRV 139


>gi|32490786|ref|NP_871040.1| hypothetical protein WGLp037 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165992|dbj|BAC24183.1| flgA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 225

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +F        V S +I +G +++E  +K +     NI  N   S + + G ++   +   
Sbjct: 94  IFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTKNIPQNIILSNQKISGKISTISIGIG 153

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  S+L  P++I +G KV +I      TI   GI++ + +I D++ VK + +G +  G
Sbjct: 154 QPITTSMLKSPWIIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKIFQG 212

Query: 140 S 140
            
Sbjct: 213 V 213


>gi|110641248|ref|YP_668978.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli 536]
 gi|191172461|ref|ZP_03034002.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           F11]
 gi|300982625|ref|ZP_07176209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 200-1]
 gi|306814079|ref|ZP_07448252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli NC101]
 gi|110342840|gb|ABG69077.1| flagella basal body P-ring formation protein FlgA precursor
           [Escherichia coli 536]
 gi|190907345|gb|EDV66943.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           F11]
 gi|300307090|gb|EFJ61610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 200-1]
 gi|305852716|gb|EFM53164.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli NC101]
 gi|324013346|gb|EGB82565.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 60-1]
          Length = 219

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|167717655|ref|ZP_02400891.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei DM98]
          Length = 184

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 48  WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARNGDLTLLPLAVITDAQQAVG 103

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 104 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 163

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 164 -MAAGQIVTAIVKDAATVEI 182


>gi|162210065|ref|YP_331875.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           pseudomallei 1710b]
          Length = 254

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +      +V     V +  I  GE L  + L       + +        +  VG
Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+
Sbjct: 174 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            +  G +V+  V D  TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252


>gi|91210224|ref|YP_540210.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli UTI89]
 gi|117623258|ref|YP_852171.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli APEC O1]
 gi|218557954|ref|YP_002390867.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli S88]
 gi|237706942|ref|ZP_04537423.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           sp. 3_2_53FAA]
 gi|91071798|gb|ABE06679.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Escherichia coli UTI89]
 gi|115512382|gb|ABJ00457.1| FlgA [Escherichia coli APEC O1]
 gi|218364723|emb|CAR02413.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli S88]
 gi|226898152|gb|EEH84411.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           sp. 3_2_53FAA]
 gi|294490364|gb|ADE89120.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           IHE3034]
 gi|307627458|gb|ADN71762.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli UM146]
 gi|315287373|gb|EFU46784.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 110-3]
 gi|323953242|gb|EGB49108.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H252]
 gi|323957896|gb|EGB53608.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H263]
          Length = 219

 Score = 89.1 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|221639445|ref|YP_002525707.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides KD131]
 gi|221160226|gb|ACM01206.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides KD131]
          Length = 220

 Score = 88.8 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             +  G V+    L    ++             D++G   +  L P   +    L   ++
Sbjct: 107 RPLARGSVIAAEDLASGPLSTRWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 158

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++RG  V + +  G + +     AL D ++GD++ V+N+ +G ++  +V       V
Sbjct: 159 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGAILRATVTARNLAEV 215


>gi|157363240|ref|YP_001470007.1| SAF domain-containing protein [Thermotoga lettingae TMO]
 gi|157313844|gb|ABV32943.1| SAF domain protein [Thermotoga lettingae TMO]
          Length = 219

 Score = 88.8 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 65/146 (44%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           ++F    S       S   S     ++    I +GE++    ++ ++      +GN+ ++
Sbjct: 71  IKFYNNRSFAGYVQASALISQPRKILIARRTIKSGEIIKREDVELVEFDVFGKKGNFTNN 130

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           ++ V G V+R++      I L  L +   +  G  +  +   G++  +     L D + G
Sbjct: 131 LEVVAGKVSRKMFREGEPIDLFYLVKAPDVRAGQVLLAVFETGSVLATALVRVLHDGNFG 190

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +++  +N+DTG ++ G +    T+ +
Sbjct: 191 EIVKARNVDTGFLIQGILRSDYTILI 216


>gi|226939515|ref|YP_002794588.1| flagella basal body P-ring formation protein FlgA [Laribacter
           hongkongensis HLHK9]
 gi|226714441|gb|ACO73579.1| probable flagella basal body P-ring formation protein FlgA
           [Laribacter hongkongensis HLHK9]
          Length = 224

 Score = 88.8 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 1/116 (0%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             + AG V+    ++     N          I+DVVG    R +     +   +L  P +
Sbjct: 107 RPLEAGAVITAEDIRLEPSRNGRAPAGSFTRIEDVVGKSLGRGVGTGVTLRREMLASPLL 166

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           + +  +V++       ++   G+AL++ S G+VI V+ +  G  + G V   G+++
Sbjct: 167 VRQNERVKVQAIGPAFSVWADGVALTNGSEGEVIGVR-MPGGRTIQGVVAADGSIQ 221


>gi|315296703|gb|EFU55998.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 16-3]
          Length = 219

 Score = 88.4 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPCTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|220903672|ref|YP_002478984.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219867971|gb|ACL48306.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 416

 Score = 88.4 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 12/146 (8%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG---NYAHS 63
            +   +   +  SL+ +V       +  +N G+ L+   +  M+V    +R    +    
Sbjct: 279 TVLRRVAGTATLSLWLTVPT----AAQSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGG 334

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
              +V     R +     I  S L    ++ RG  V +I ++GN+ I+T   AL+D   G
Sbjct: 335 PWQLV-----RAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPG 389

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
             I V+N+ T   V G V +  TV +
Sbjct: 390 ATIPVRNLQTKKQVFGIVKNGNTVEI 415


>gi|187926958|ref|YP_001893303.1| flagella basal body P-ring formation protein FlgA [Ralstonia
           pickettii 12J]
 gi|241665287|ref|YP_002983646.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
           pickettii 12D]
 gi|187728712|gb|ACD29876.1| flagella basal body P-ring formation protein FlgA [Ralstonia
           pickettii 12J]
 gi|240867314|gb|ACS64974.1| flagella basal body P-ring formation protein FlgA [Ralstonia
           pickettii 12D]
          Length = 291

 Score = 88.4 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 5/145 (3%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R    ++ +V +       + G   V S  ++ G+ L+   L+      S +  +     
Sbjct: 150 RSPHAWAAWVPATI----QITGTYYVASHQLSPGKTLDMGDLEARTGDLSMLPPSVVQQP 205

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
            DVVG V    +  +  +    L  P  +  G  V+++   G   +++ G AL+ A++G 
Sbjct: 206 ADVVGRVLVTSVAANQPLRAESLRLPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQ 265

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
           V  V+    G +VSG     G V +
Sbjct: 266 VAQVR-TANGNVVSGIAQSVGVVAI 289


>gi|194445224|ref|YP_002040427.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194403887|gb|ACF64109.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
          Length = 219

 Score = 88.4 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + +++  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWLVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|30248318|ref|NP_840388.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
           europaea ATCC 19718]
 gi|30138204|emb|CAD84212.1| putative flagella basal body P-ring formation protein [Nitrosomonas
           europaea ATCC 19718]
          Length = 230

 Score = 88.4 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LYV         VI   V  +  ++ G+ L    +   +     I G  A     V+G
Sbjct: 94  WTLYVPVEI----EVITRVVHAAQPVSMGKQLEAQDIVSKEADLVRIPGEVATDPDQVIG 149

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
            V    L     I    L  P+VISRG KVR+  T     +S  G AL+ A+ G+V+ V+
Sbjct: 150 KVATTFLASGQPIRTHQLRAPHVISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVR 209

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N  TG ++ G     G V +
Sbjct: 210 N-HTGRIIRGIARAGGVVEI 228


>gi|289523331|ref|ZP_06440185.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503023|gb|EFD24187.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 305

 Score = 88.0 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 43/90 (47%)

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
           G+       ++G   +  L     I L  +   Y++ RG +VR+ +  G +++ T   AL
Sbjct: 209 GDIPQYADAILGKKLKTNLEAGSPIYLHDVEPLYLVKRGDRVRLYVNSGMISVETVAKAL 268

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              ++GD+I V N+D+   +S  V   G V
Sbjct: 269 DSGALGDIIRVINLDSRRTISAKVAGKGAV 298


>gi|114797541|ref|YP_758988.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas
           neptunium ATCC 15444]
 gi|114737715|gb|ABI75840.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas
           neptunium ATCC 15444]
          Length = 135

 Score = 88.0 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
              L+ L   +  A     +++ S VI AG+++         V  S   G+ A   + V+
Sbjct: 1   MSVLFALGFTAFVALTDASSMIASEVIRAGDIVTP-------VNASAETGDVASMEEPVI 53

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G   +R +     + +       +++R   V +    G + IST G A+ +AS+ + + V
Sbjct: 54  GREAKRTIYAGQPVTMDNTRPARLVTRNQIVTVKYIHGGLEISTTGRAMGEASLNEPVTV 113

Query: 129 KNIDTGVMVSGSVVDTGTV 147
            N+++  MV G V ++G V
Sbjct: 114 LNLESRQMVQGIVQESGWV 132


>gi|1857440|gb|AAC45658.1| FlgA [Proteus mirabilis]
          Length = 218

 Score = 88.0 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
            G  +V    IN  +V+  S +K ++     +  +       +   +  R +     I  
Sbjct: 93  YGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHIATGKPITS 152

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           +++ RP+ I  G  V +     +  I   G A+++A   + I ++ + +G +++G  ++ 
Sbjct: 153 TMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQIITGEALEN 211

Query: 145 GTVRV 149
           G+VR+
Sbjct: 212 GSVRI 216


>gi|85715051|ref|ZP_01046036.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
 gi|85698248|gb|EAQ36120.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
          Length = 362

 Score = 88.0 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  ++   +L  S +   +   + +  + A     VVG+ TRR +     +  + L
Sbjct: 206 AAVLARDVDRHTLLKFSDVVMERRPKAEVGRDAASH-DHVVGMQTRRQMRAGQALHGADL 264

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            RP ++ R   V +I     + ++  G A    + GDV++V N+ +   VSG VV  G V
Sbjct: 265 TRPDLVQRDEAVTLIYQAAGIYLTVRGKATEAGTEGDVVSVLNLQSKRTVSGVVVGRGQV 324

Query: 148 RV 149
            V
Sbjct: 325 SV 326


>gi|304321134|ref|YP_003854777.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
           HTCC2503]
 gi|303300036|gb|ADM09635.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
           HTCC2503]
          Length = 125

 Score = 88.0 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97
           GEV   +RL    V + +      + +  +VG    R + P   I  S      ++ R +
Sbjct: 12  GEVHANARLPAGTVIDGSGLAGNENDVDRLVGRQLTRTIFPGRTISFSDTKEADLVDRNS 71

Query: 98  KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
            VRI+  +G M I T G AL   + G+ I V N+++   ++  +   G VRV +
Sbjct: 72  TVRIVAVKGPMRIETKGRALGAGAEGEEILVMNLESRRTITAVISGPGEVRVEL 125


>gi|68164554|gb|AAY87283.1| predicted flagellar basal body P-ring biosynthesis protein
           [uncultured bacterium BAC17H8]
          Length = 276

 Score = 87.6 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 1/125 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            V  +  ++  +++    L  + V+  N  G +     DV G   +  L     +    L
Sbjct: 152 VVALARSVSRNDMIAREDLIMVPVSARNAFGAFF-DPADVAGRRLKMGLSARKPLMARHL 210

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +  Y++  G +V I  + G ++I+  G AL +  I + I V+N  +G  +   +     V
Sbjct: 211 YPDYLVEEGNEVLITSSSGGISINMVGYALENGQISEWIGVENASSGKTIRAKITGEKKV 270

Query: 148 RVVVK 152
            V+ K
Sbjct: 271 TVIAK 275


>gi|119384848|ref|YP_915904.1| flagellar basal body P-ring biosynthesis protein FlgA [Paracoccus
           denitrificans PD1222]
 gi|119374615|gb|ABL70208.1| SAF domain [Paracoccus denitrificans PD1222]
          Length = 138

 Score = 87.6 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
            +  +VV +  + AG V+    +  +     + +      I  VVG   R ++     I 
Sbjct: 15  AMAGSVVANRTLPAGTVIAAGDVSLV-----DDQPGGVEDIAQVVGQQLRVMVYQGRRID 69

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
            S L  P ++ R   V I   +  + I   G ALS  S G +I V N  + V VSG V  
Sbjct: 70  PSTLTAPTLVGRNQIVTIAYEKATLRIEAEGRALSAGSAGQIIRVMNNASRVTVSGRVAP 129

Query: 144 TGTVRV 149
            GTV V
Sbjct: 130 DGTVIV 135


>gi|260222463|emb|CBA32052.1| hypothetical protein Csp_D30190 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 245

 Score = 87.6 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 5/149 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           M CV  +  +++ +          +G A V    +N+G  ++ES +   +V  +  +   
Sbjct: 100 MRCVDGISRWNVTLPVTV----RAMGEAWVVRNQVNSGANISESDVTRGEVDWAEEQSPV 155

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
                  +G    R L     +   ++    V   GA V+I+       IS+   ALS  
Sbjct: 156 LADKTAWLGQTASRTLTTGQAMRQGMVRPAQVFQAGASVKIVAQGPGFQISSEAQALSAG 215

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            IG    V+ +D G + SG+V+D  TV++
Sbjct: 216 VIGQQARVR-MDNGRVASGTVLDMRTVKI 243


>gi|161503739|ref|YP_001570851.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160865086|gb|ABX21709.1| hypothetical protein SARI_01824 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 267

 Score = 87.2 bits (215), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   ++ R L P 
Sbjct: 137 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAISLRDLAPG 196

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 197 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 255

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 256 TVDPDGNILI 265


>gi|302878272|ref|YP_003846836.1| flagella basal body P-ring formation protein FlgA [Gallionella
           capsiferriformans ES-2]
 gi|302581061|gb|ADL55072.1| flagella basal body P-ring formation protein FlgA [Gallionella
           capsiferriformans ES-2]
          Length = 225

 Score = 87.2 bits (215), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +L  +   +    +V +  +  G+++ E+ L  +Q   +   G        +VG V R  
Sbjct: 93  TLIPVQIKITRELLVSAHALTLGQIVRETDLARLQTETTLNSG--ITDASLIVGKVLRYS 150

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +   +++   +L  PY I +G  V + +     T+S++G+AL++AS G+ +  +   +G 
Sbjct: 151 VAAGYILREDMLRPPYSIKQGQTVNLSIQANGFTLSSSGVALNNASEGETVQAR-TSSGR 209

Query: 136 MVSGSVVDTGTVRV 149
           ++SG+    G + +
Sbjct: 210 VISGTASADGVILI 223


>gi|114762165|ref|ZP_01441633.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
           bermudensis HTCC2601]
 gi|114545189|gb|EAU48192.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           HTCC2601]
          Length = 138

 Score = 87.2 bits (215), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  + A +++    ++                ++DV+G   R  L P   +    + 
Sbjct: 19  VVATRTVRAQDIVPADAVRLESADVP----GAHVVLEDVIGQEARVTLYPGRAVMRGAVG 74

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P ++ R   V +I  +  + I T G AL  A  G+ + V N+ +   + G+V  +GTV 
Sbjct: 75  APALVERNQIVELIFARNGLHIVTEGRALDRAGAGERVRVMNLSSRSTLFGTVTASGTVS 134

Query: 149 VV 150
           V+
Sbjct: 135 VL 136


>gi|218700425|ref|YP_002408054.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli IAI39]
 gi|218370411|emb|CAR18218.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli IAI39]
          Length = 219

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R + PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDISPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + TG +VSG
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVTGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|226327750|ref|ZP_03803268.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198]
 gi|225203454|gb|EEG85808.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198]
          Length = 218

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +  SV G  +V    IN  + +  + +  +         +       +   +  R +
Sbjct: 85  FIQVDVSVTGKYLVAKKDINRDDAIETASVSMITGELEKQPYDVLRDPTLIKNAIAMRQI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
                I  +++ RP+ I  G  V +     +  I   G A+++A   + I V+ + +G +
Sbjct: 145 SAGKPITSTMIRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANETIRVR-VKSGQI 203

Query: 137 VSGSVVDTGTVRV 149
           V G  ++ G+VR+
Sbjct: 204 VIGEALENGSVRI 216


>gi|16764529|ref|NP_460144.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167994036|ref|ZP_02575128.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168234098|ref|ZP_02659156.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168244771|ref|ZP_02669703.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168467124|ref|ZP_02700966.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194447951|ref|YP_002045172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194472156|ref|ZP_03078140.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197263841|ref|ZP_03163915.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|224584323|ref|YP_002638121.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|729518|sp|P40131|FLGA_SALTY RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|505360|dbj|BAA04977.1| FlgA protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16419690|gb|AAL20103.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194406255|gb|ACF66474.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194458520|gb|EDX47359.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|195630342|gb|EDX48968.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197242096|gb|EDY24716.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205328041|gb|EDZ14805.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205331936|gb|EDZ18700.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336444|gb|EDZ23208.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|224468850|gb|ACN46680.1| flagellar basal body P-ring biosynthesis protein [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261246384|emb|CBG24193.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992946|gb|ACY87831.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301157714|emb|CBW17206.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312912160|dbj|BAJ36134.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223791|gb|EFX48854.1| Flagellar basal-body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|323129443|gb|ADX16873.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|332988064|gb|AEF07047.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 219

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  I  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|296103615|ref|YP_003613761.1| Flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058074|gb|ADF62812.1| Flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 232

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
            +  S  G   V S  +  G ++  S ++ +     +  G    +  +++G    R +  
Sbjct: 99  PVRISAQGTWWVASQSLPGGAIVQRSDIEPVTGNLDHQPGGLIFNADEIIGQRLTRAIDA 158

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              +  + L + + +  G  V ++ T     I + G AL++A++ DV+ VK +  G  VS
Sbjct: 159 GKPLLENQLRQQWRLRAGQTVDLVTTGAGFRIRSQGKALNNAAVDDVLKVKTVG-GRTVS 217

Query: 139 GSVVDTGTVRVVVK 152
           G V   G V ++ +
Sbjct: 218 GKVGADGQVMIISQ 231


>gi|242278485|ref|YP_002990614.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           salexigens DSM 2638]
 gi|242121379|gb|ACS79075.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           salexigens DSM 2638]
          Length = 334

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 2/131 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           SLF  +      P   IN  E++    +       +++                +  +  
Sbjct: 205 SLFVDLWKPVPCPVRPINRKELVTPDLITWKSKNMAHLGNQVWDGKGGP--WRVKVPVGT 262

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
              I  S +    VI+RG KV ++    N+ ++    AL DA +G  I V+N+ +   V 
Sbjct: 263 GQPIMRSSIEPAPVIARGDKVTLMFRGKNLKLTVPVEALEDAGVGQNITVRNLQSKRKVV 322

Query: 139 GSVVDTGTVRV 149
            +VV+  TV+V
Sbjct: 323 ATVVNAQTVQV 333


>gi|156934444|ref|YP_001438360.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156532698|gb|ABU77524.1| hypothetical protein ESA_02275 [Cronobacter sakazakii ATCC BAA-894]
          Length = 219

 Score = 87.2 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV S  +  G +L+ES ++  +     +  N   ++      VT R L  +
Sbjct: 89  VNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAAN 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + LS++ + + +  G +V+I+      +I+  G AL++A++     V+ + +G +VSG
Sbjct: 149 QPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 IVGSDGIILI 217


>gi|24112483|ref|NP_706993.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           flexneri 2a str. 301]
 gi|30062610|ref|NP_836781.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           flexneri 2a str. 2457T]
 gi|24051369|gb|AAN42700.1| flagellar basal body P-ring protein FlgA precursor [Shigella
           flexneri 2a str. 301]
 gi|30040856|gb|AAP16587.1| flagellar basal body P-ring protein FlgA precursor [Shigella
           flexneri 2a str. 2457T]
 gi|281600492|gb|ADA73476.1| Flagellar basal body P-ring protein FlgA [Shigella flexneri
           2002017]
 gi|332759617|gb|EGJ89922.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri 2747-71]
          Length = 219

 Score = 86.8 bits (214), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +  +VSG
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVVSG 207

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 208 VVDADGNILI 217


>gi|168822615|ref|ZP_02834615.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205340989|gb|EDZ27753.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320086387|emb|CBY96160.1| Flagella basal body P-ring formation protein flgA Flags: Precursor
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 219

 Score = 86.8 bits (214), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V     I  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVDAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|114330357|ref|YP_746579.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
           eutropha C91]
 gi|114307371|gb|ABI58614.1| putative flagella basal body P-ring formation protein [Nitrosomonas
           eutropha C91]
          Length = 231

 Score = 86.8 bits (214), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 5/141 (3%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            ++LYV         VI + +  +  IN G++++   +   +V    I          VV
Sbjct: 94  AWTLYVPVEI----EVIANVIHAAQPINMGKLVDTQDIVSKEVDLVRIPAGAVTDPDQVV 149

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           G V    L     I    L  PY+I+RG K+R+  T     +ST G AL+ A+ G+V+ +
Sbjct: 150 GKVAVTFLASGQPIRTHQLRAPYIITRGQKIRLTATGAGFAVSTEGEALAAAAEGEVVQI 209

Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
           +N  TG ++SG     G V +
Sbjct: 210 RN-HTGRIMSGIARAGGIVEI 229


>gi|77463603|ref|YP_353107.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388021|gb|ABA79206.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
           sphaeroides 2.4.1]
          Length = 222

 Score = 86.8 bits (214), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 8/117 (6%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             +  G V+    L     +             D++G   +  L P   +    L   ++
Sbjct: 109 RPLARGSVIAAEDLASGPESARWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 160

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++RG  V + +  G + +     AL D ++GD++ V+N+ +G  +  +V       V
Sbjct: 161 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 217


>gi|317047687|ref|YP_004115335.1| flagella basal body P-ring formation protein FlgA [Pantoea sp.
           At-9b]
 gi|316949304|gb|ADU68779.1| flagella basal body P-ring formation protein FlgA [Pantoea sp.
           At-9b]
          Length = 219

 Score = 86.8 bits (214), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +   V G  +V +  +  G  +  S  +        +      S   V   +  R + P 
Sbjct: 89  VQVQVTGLYLVANHQLMRGSNVTASDFRLQSGRLDTLPARTLFSADSVADAIAMRDITPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +  +++  P+ +  G  V ++ +      S+ G AL++A+   ++ V+ +  G +VSG
Sbjct: 149 QPVTATMVRLPWRVKAGQNVIVVASGNGFDASSEGQALNNATTAQMVRVR-MGNGQVVSG 207

Query: 140 SVVDTGTVRVVV 151
            V + G + + +
Sbjct: 208 RVGEDGNILISL 219


>gi|91776305|ref|YP_546061.1| flageller protein FlgA [Methylobacillus flagellatus KT]
 gi|91710292|gb|ABE50220.1| flagellar protein FlgA [Methylobacillus flagellatus KT]
          Length = 235

 Score = 86.8 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
              +++YV +       V+   +V +  +  G ++ E  L +     + +          
Sbjct: 96  PQVWTIYVQANV----QVMAEYLVAAAPLAQGHIITEQDLAKSHGDLAKLPPGVFTDASQ 151

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            +G      L    V+   +L    V+ +G KV +        +S  G AL+ A  G  +
Sbjct: 152 AIGRAVYVPLSAGTVLRQEMLRVLPVVQQGQKVILNTMGEGFKVSAEGTALTSAGDGQRV 211

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
            VK +  G +VSG     G + V+
Sbjct: 212 KVK-VGNGRVVSGLARRGGLIEVI 234


>gi|323976555|gb|EGB71643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TW10509]
          Length = 219

 Score = 86.8 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
           +  ++     L     D  +  V     G+ VV ++ I  G  L    +K  +     + 
Sbjct: 67  NSRQWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLP 126

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
                 I  ++  V+ R L P+  I L+ L + + +  G +V +I      + +  G AL
Sbjct: 127 PRTVLDINQLIDAVSLRDLSPEQPIQLTQLRQAWRVKAGQRVNVIANGDGFSANAEGQAL 186

Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++A++     V+ + +G ++SG V   G + +
Sbjct: 187 NNAAVAQNARVR-MVSGQVISGVVDADGNILI 217


>gi|126462435|ref|YP_001043549.1| SAF domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126104099|gb|ABN76777.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
          Length = 220

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 8/117 (6%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             +  G V+    L     +             D++G   +  L P   +    L   ++
Sbjct: 107 RPLARGSVIAAEDLASGPESARWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 158

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++RG  V + +  G + +     AL D ++GD++ V+N+ +G  +  +V       V
Sbjct: 159 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 215


>gi|331657133|ref|ZP_08358095.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA206]
 gi|331055381|gb|EGI27390.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA206]
          Length = 156

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +G +VSG
Sbjct: 86  QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 144

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 145 VVDADGNILI 154


>gi|238796900|ref|ZP_04640404.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           mollaretii ATCC 43969]
 gi|238719160|gb|EEQ10972.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
           mollaretii ATCC 43969]
          Length = 230

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 1/122 (0%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
               I  G  +    +     +   +      + + +VG    R +     I  + L R 
Sbjct: 109 ARKTIKPGSEIQAENIVSRTGSLDRLPAGLVFNKESIVGQTAARTITRGQPIVQTQLRRR 168

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           + I  G +V I +T     I   G AL +A++G  + +  + +G ++ G     G V + 
Sbjct: 169 WAIVSGQEVEITVTGPGFRIRAKGKALDNAAVGKPVRIA-MRSGQIMPGVASSEGKVDIN 227

Query: 151 VK 152
           +K
Sbjct: 228 LK 229


>gi|227356005|ref|ZP_03840397.1| flagella basal body P-ring formation protein [Proteus mirabilis
           ATCC 29906]
 gi|227163993|gb|EEI48895.1| flagella basal body P-ring formation protein [Proteus mirabilis
           ATCC 29906]
          Length = 218

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +  SV G  +V    IN  +V+ +S +K ++     +  +       +   +  R +
Sbjct: 85  FIQVDVSVYGQYLVAKKEINRDDVITKSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
             +  I  +++ RP+ I  G  V +     +  I   G A+++A   + I ++ + +G +
Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203

Query: 137 VSGSVVDTGTVRV 149
           ++G  ++ G+VR+
Sbjct: 204 ITGEALENGSVRI 216


>gi|146277660|ref|YP_001167819.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145555901|gb|ABP70514.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 225

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V  +  +  G  L    L     +    R       + ++G   +  L P   I    L 
Sbjct: 105 VTLARPVARGSALAAEDLAPGDGSAEQKRWQ-----QALIGRRLKVALAPGQPILPRHLE 159

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
             ++++RG  V + +  G + + TAG AL+DA++GD++ V+N+ +G ++  +V    
Sbjct: 160 PDWLVTRGGPVALRVAVGPIEVLTAGEALADAALGDLVEVRNLSSGAILRATVTARN 216


>gi|82702447|ref|YP_412013.1| flageller protein FlgA [Nitrosospira multiformis ATCC 25196]
 gi|82410512|gb|ABB74621.1| flagellar protein FlgA [Nitrosospira multiformis ATCC 25196]
          Length = 248

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +       V+   +V +  +  G+V++ S L   +   + +           +G
Sbjct: 112 WTIYVRATV----KVVAEYLVSTRPLRQGQVIDASDLTSRKGDLTQLPPGIVTDWNQAIG 167

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 L     +   +L     + +   V+++ +    ++S  G AL+ A+ G  + V+
Sbjct: 168 RTLGGNLPFGSPLRQDMLRAQTAVIQNQTVKLVSSGRGFSVSAEGKALTHATEGQPVTVR 227

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
              +G +VSG       V V  
Sbjct: 228 -SASGAVVSGIARAGAIVEVTY 248


>gi|297538892|ref|YP_003674661.1| flagella basal body P-ring formation protein FlgA [Methylotenera
           sp. 301]
 gi|297258239|gb|ADI30084.1| flagella basal body P-ring formation protein FlgA [Methylotenera
           sp. 301]
          Length = 251

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 5/143 (3%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
              +++YV +  +    VI   +V +  +  G+ + E  +       + +          
Sbjct: 112 PNVWTIYVQATVN----VIAQYLVAASPLAQGQTVTEQDMMFESGDLTQLPAGVFTEQSQ 167

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            +G      +    V+   +L    V+  G  V +       ++S  G++++ A+ G V+
Sbjct: 168 AIGRTVNISMNAGAVLRQELLKVAPVVQLGQTVMVTSKGNGFSVSAEGLSMAKANEGQVV 227

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            VK + +G +V+G   + G V V
Sbjct: 228 QVK-VASGQIVTGIARNGGQVEV 249


>gi|149201629|ref|ZP_01878603.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           TM1035]
 gi|149144677|gb|EDM32706.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           TM1035]
          Length = 232

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A+V +  +  G VL  + L+E  +  +  RG+   S +  +G   +  L     +    
Sbjct: 106 PALVLTESLPRGTVLEATHLREAPI-GARARGDLVMSPETAIGRRLKSNLGAGQPLLARH 164

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L   + +  G  V I    G + I  AG+AL    +G  I V N  +G +V  +V     
Sbjct: 165 LEHDWQVDVGGPVTIATDLGGIRIEAAGVALEPGQMGQDIRVTNAGSGEVVHVTVTGRNK 224

Query: 147 VRV 149
           V V
Sbjct: 225 VTV 227


>gi|152979911|ref|YP_001353107.1| flagellar basal body P-ring biosynthesis protein [Janthinobacterium
           sp. Marseille]
 gi|151279988|gb|ABR88398.1| Flagellar basal body P-ring biosynthesis protein [Janthinobacterium
           sp. Marseille]
          Length = 234

 Score = 86.4 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 56/145 (38%), Gaps = 5/145 (3%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
              +++YV +       V G  +  +  +  G+ +    + +++   +N+          
Sbjct: 95  PTVWTIYVSAQV----RVHGEYIAAAAPLAQGQNIGPGDIAKVKGDLTNLPSGVITDASQ 150

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
            +G      +     +    L     I +G  VR+IL     ++S+   AL++A+ G + 
Sbjct: 151 AIGRTAATTIALGAPLRQDALRNQQAIQQGQAVRVILNGDGFSVSSEARALNNANEGQLT 210

Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
            V+    G ++SG     G V +  
Sbjct: 211 QVR-TAAGQVISGIAKLGGIVELAY 234


>gi|92116935|ref|YP_576664.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
           hamburgensis X14]
 gi|91799829|gb|ABE62204.1| flagellar protein FlgA [Nitrobacter hamburgensis X14]
          Length = 373

 Score = 86.1 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 1/122 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A V +  ++   +L  S +   +   + +  + A +   V+G+  RR +     +  + L
Sbjct: 210 AAVLARDVDRNSLLKFSDVVMERRPKAEVGNDAA-NRDHVIGMQARRQMRAGQALRRADL 268

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P ++ R   V +I     + ++  G A    + GDV++  N+ +   VSG VV  G V
Sbjct: 269 TKPDLVQRDQAVTLIYQAAGIYLTVRGKATESGTEGDVVSALNLQSKRTVSGVVVGRGQV 328

Query: 148 RV 149
            V
Sbjct: 329 SV 330


>gi|167835106|ref|ZP_02461989.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
           thailandensis MSMB43]
          Length = 152

 Score = 86.1 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
              +V     V +  I  GE L  + L       + +        +  VG  T   +   
Sbjct: 22  AKLAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVGATTLTRVAAG 81

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             +   +L     +S G  VR++ +    TIS  G  L++A+ G  + V+ +  G +V+ 
Sbjct: 82  LPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR-MAAGQIVTA 140

Query: 140 SVVDTGTVRV 149
            V D  TV +
Sbjct: 141 IVKDAATVEI 150


>gi|329297214|ref|ZP_08254550.1| flagella basal body P-ring formation protein FlgA [Plautia stali
           symbiont]
          Length = 170

 Score = 86.1 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G  +V +  +  G  ++ +  +        +      S  ++   +  R + P   +
Sbjct: 48  QVTGEYLVANRQLARGSNVSANDFR-----LDTLPARALLSSSNLADAIALRDIAPGQPV 102

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             ++L +P+ +  G  V +I +      S+ G AL++AS    + V+ +  G++VSG V 
Sbjct: 103 TATMLRQPWRVKAGQNVMVIASGNGFNASSEGRALNNASAAQTVRVR-MSNGLVVSGRVS 161

Query: 143 DTGTVRVVV 151
           + G + + +
Sbjct: 162 EDGNILISL 170


>gi|332558459|ref|ZP_08412781.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332276171|gb|EGJ21486.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 222

 Score = 86.1 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 8/117 (6%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             +  G V+    L    ++             D++G   +  L     +    L   ++
Sbjct: 109 RPLARGSVIAAEDLASGPLSARWHA--------DLIGRRLKVALAAGQPVLPRHLEPDWL 160

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++RG  V + +  G + +     AL D ++GD++ V+N+ +G  +  +V       V
Sbjct: 161 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 217


>gi|258592559|emb|CBE68868.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 351

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           LY     ++  S++   VV +  +    V+  + ++  +     +       +   VG  
Sbjct: 211 LYRAVSLAVRLSLMREVVVVNYPLPRHTVVKGADVRLERRDIGPLAHEPLQDLTLAVGRR 270

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
           T R L    V+    +  P +I +G  V +++    + ++  GIA      G ++ VKN 
Sbjct: 271 TTRTLAMGEVVVSESVELPPLIQKGEVVTLMVETPRLLVTAKGIAQEVGKAGQLVRVKNT 330

Query: 132 DTGVMVSGSVVDTGTVRV 149
            +G  V G +    T+R+
Sbjct: 331 ASGREVIGKLETDKTIRI 348


>gi|260429306|ref|ZP_05783283.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
           SE45]
 gi|260419929|gb|EEX13182.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
           SE45]
          Length = 139

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 VV +  I A EV+    ++               S+ DVVG      + P   +
Sbjct: 14  PAQAETVVATRTIRALEVIPPDAVRLDPAEI----AGAHDSLADVVGQEALVAIYPGRPV 69

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +  +  P +I R   V +I  +G + I+T G AL+  ++G+ I V N+ +   + G+V 
Sbjct: 70  LIGTVGIPALIERNQIVELIFAKGALQIATEGRALARGAVGERIRVMNLSSRTTLFGTVT 129

Query: 143 DTGTVRV 149
           + G V V
Sbjct: 130 EAGAVIV 136


>gi|116626489|ref|YP_828645.1| SAF domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229651|gb|ABJ88360.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
          Length = 285

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 1/127 (0%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V    VV +  + AG  ++ +RL+          G Y  +I++  G V RR +     + 
Sbjct: 156 VPVARVVATEALQAGRPIDPARLRVESREELPATG-YLAAIEETAGKVPRRSIAAGTPLR 214

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              L    V+  G  V++ +  G   +   G+A++  ++GD + V N D+       V  
Sbjct: 215 AQWLEAARVVMSGDTVQVEIINGGAHLVLDGVAVTSGAVGDTVLVLNPDSKKQFRARVTA 274

Query: 144 TGTVRVV 150
            G VRV 
Sbjct: 275 AGKVRVT 281


>gi|200389413|ref|ZP_03216024.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199601858|gb|EDZ00404.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 219

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +    IG+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQAIGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPKTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|294084427|ref|YP_003551185.1| SAF domain-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664000|gb|ADE39101.1| SAF domain protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 295

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
               V  +  +  G+++    +  + V+   + G +     DVVG   +  +     +  
Sbjct: 167 TARVVSLTRSMTRGDIITPEDVAFIDVSMREVVGVFF-DHDDVVGRRLKTSISARKPVFA 225

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             LH  +++ +  +V ++   G + +S  G AL +   G+ I VKN ++  +V G ++++
Sbjct: 226 RQLHPYWMVEKDQEVTLVNRAGAVAVSMLGYALENGQFGEWIKVKNANSDKIVHGQIINS 285

Query: 145 GTV 147
             +
Sbjct: 286 KKI 288


>gi|197285514|ref|YP_002151386.1| flagella basal body P-ring formation protein [Proteus mirabilis
           HI4320]
 gi|194683001|emb|CAR43457.1| flagella basal body P-ring formation protein [Proteus mirabilis
           HI4320]
          Length = 218

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 1/133 (0%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
              +  SV G  +V    IN  +V+  S +K ++     +  +       +   +  R +
Sbjct: 85  FIQVDVSVYGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
             +  I  +++ RP+ I  G  V +     +  I   G A+++A   + I ++ + +G +
Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203

Query: 137 VSGSVVDTGTVRV 149
           ++G  ++ G+VR+
Sbjct: 204 ITGEALENGSVRI 216


>gi|291336858|gb|ADD96390.1| predicted flagellar basal body P ring biosynthesis protein
           [uncultured organism MedDCM-OCT-S09-C206]
          Length = 239

 Score = 85.7 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
             V    I+ G+V++E  L         I G Y + I  V+G   +  +    ++    L
Sbjct: 115 VAVLIKNISKGQVISEEYLGFEARPERQIHGAY-NHISGVLGRKAKNNIAAGTILKARHL 173

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              Y + +   V +I     +TI+T+ IAL +  +GD+IAVKN+ +       +     V
Sbjct: 174 DTVYSVDKNDSVLVIAANKAITITTSAIALENGQVGDMIAVKNVKSEKTFKVIITGKKKV 233


>gi|116694215|ref|YP_728426.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
           eutropha H16]
 gi|113528714|emb|CAJ95061.1| flagellar basal body P ring formation protein [Ralstonia eutropha
           H16]
          Length = 263

 Score = 85.7 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+    V +  +  GE + ++ ++  Q     +          + G VT   +     I
Sbjct: 137 SVLTDYYVAARALGPGEPVGQADIEVRQGDLGTLPRAVITDPAQLAGAVTANRIAAGSPI 196

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L +   + +G  V + +      I++ G  L+DA+ G+ + V+ + +G +V+G V 
Sbjct: 197 RSDLLRKAIAVRQGQTVTVAVEGDAFQITSEGKVLADAATGNTVQVR-LRSGQVVNGLVR 255

Query: 143 DTGTV 147
              TV
Sbjct: 256 SGDTV 260


>gi|16760049|ref|NP_455666.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142180|ref|NP_805522.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|197251473|ref|YP_002146870.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|213161848|ref|ZP_03347558.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213417745|ref|ZP_03350863.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213424676|ref|ZP_03357441.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213648922|ref|ZP_03378975.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|238911007|ref|ZP_04654844.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|289828584|ref|ZP_06546409.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25323459|pir||AF0639 flagellar basal body P-ring protein FlgA precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502343|emb|CAD08297.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29137810|gb|AAO69371.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|197215176|gb|ACH52573.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 219

 Score = 85.7 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|161614605|ref|YP_001588570.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|168237254|ref|ZP_02662312.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168264035|ref|ZP_02686008.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|194737046|ref|YP_002114172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|198242724|ref|YP_002215964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|207857319|ref|YP_002243970.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|161363969|gb|ABX67737.1| hypothetical protein SPAB_02355 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194712548|gb|ACF91769.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197289897|gb|EDY29258.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197937240|gb|ACH74573.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|205347335|gb|EDZ33966.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709122|emb|CAR33455.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|322616543|gb|EFY13452.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322620516|gb|EFY17380.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322622510|gb|EFY19355.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629661|gb|EFY26436.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322632619|gb|EFY29365.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322636886|gb|EFY33589.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641576|gb|EFY38214.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322644066|gb|EFY40612.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650033|gb|EFY46451.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322653959|gb|EFY50282.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658491|gb|EFY54753.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322663349|gb|EFY59551.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322670083|gb|EFY66223.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322674853|gb|EFY70944.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322676677|gb|EFY72744.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682599|gb|EFY78618.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322686648|gb|EFY82627.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323195762|gb|EFZ80938.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198346|gb|EFZ83450.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203170|gb|EFZ88200.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323209173|gb|EFZ94110.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323209677|gb|EFZ94606.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323217867|gb|EGA02582.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222155|gb|EGA06539.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323224927|gb|EGA09185.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323229669|gb|EGA13792.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323232894|gb|EGA16990.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323240629|gb|EGA24671.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323242943|gb|EGA26964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323250260|gb|EGA34149.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323252635|gb|EGA36473.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323258837|gb|EGA42490.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323261026|gb|EGA44619.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323266935|gb|EGA50420.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269976|gb|EGA53425.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 219

 Score = 85.7 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|62179690|ref|YP_216107.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|62127323|gb|AAX65026.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322714160|gb|EFZ05731.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 219

 Score = 85.7 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  I  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPIARGGKLMPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|85705077|ref|ZP_01036177.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           217]
 gi|85670399|gb|EAQ25260.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
           217]
          Length = 232

 Score = 85.3 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A+V +  +  G VL    L+E+++  +  + +   +++  +G   +  L     + +  L
Sbjct: 107 ALVLAESLPRGTVLRAEHLREVEI-ATTGQSDLVEAVETAIGRRLKSNLGAGQPLLVRHL 165

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
              + +  G  V I+   G + I  AG+AL    +G  I V N  +G +V  +V     V
Sbjct: 166 EHDWQVEEGGPVTIVTAMGGIRIEAAGVALEAGQVGQAIRVTNAGSGDVVHVTVTGRNKV 225

Query: 148 RV 149
            V
Sbjct: 226 TV 227


>gi|220924577|ref|YP_002499879.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           nodulans ORS 2060]
 gi|219949184|gb|ACL59576.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
           nodulans ORS 2060]
          Length = 343

 Score = 85.3 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +    V +  +  GE +  + +   +        +       +VG V +R L P   +  
Sbjct: 204 MIEVAVLTRALARGESVGAADVTVQRRARDGSSADATADAASLVGQVAQRALAPGQKLRA 263

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             L RP ++ RG  V I+     ++++  G A     +G V+AV N  +  ++  +V   
Sbjct: 264 GDLARPELVQRGETVTILYEGPGVSLALRGQAKEGGPLGAVVAVVNPVSKKVLQATVSGP 323

Query: 145 GTVRV 149
           G V V
Sbjct: 324 GRVSV 328


>gi|218887605|ref|YP_002436926.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758559|gb|ACL09458.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 346

 Score = 85.3 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           S F  V       +  +N  +VL   ++  ++   + +R      +         R +  
Sbjct: 217 SAFVDVWADVPCAAQPVNKDDVLTPEKITRVRKNLAYLREPAWDGLGGP--WRLTRPVGA 274

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
           D VI  S L     + RG+ V ++   G++ +   G A++D  +G+ I V+N+ +   + 
Sbjct: 275 DQVIYQSDLSGVPTVRRGSVVTVLYDSGSVRLQVQGEAMADGGLGETIPVRNMQSKRQIY 334

Query: 139 GSVVDTGTVRV 149
            +V D GTV V
Sbjct: 335 AAVKDGGTVVV 345


>gi|303328379|ref|ZP_07358817.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861709|gb|EFL84645.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 417

 Score = 85.3 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 2/119 (1%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            S  +  G+ L    +  M++  S +R                R L+    I  S L   
Sbjct: 300 ASRPLGKGDALTPEAVTFMRINASQLRDLPWDGHGGP--WQVTRSLITGEPILQSDLASQ 357

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            ++ RG  + +I T+GN+ ++T   AL+D   G  I V+N+ T   +  +V D  TV +
Sbjct: 358 LMVRRGTILSLIYTRGNLRMTTQAEALADGEPGATIPVRNLQTKKQIYATVKDGSTVEI 416


>gi|94312665|ref|YP_585874.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus
           metallidurans CH34]
 gi|93356517|gb|ABF10605.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus
           metallidurans CH34]
          Length = 245

 Score = 84.9 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+    V +  +  GE +  + L+  Q   + +          V G V+   +     +
Sbjct: 118 SVLTDYYVAARAMGPGETITAADLEVRQGDLAMLPRAVVTDPSQVDGAVSANRIAAGSPM 177

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              ++ +P  +  G  V + +   +  +S+ G  L+DA+ G+++ V+ +  G +VSG V 
Sbjct: 178 RTDLVRKPIAVKSGQTVNVTVEGDSFQLSSEGKVLTDAATGNMVQVR-LRNGQVVSGLVR 236

Query: 143 DTGTV 147
              TV
Sbjct: 237 SGDTV 241


>gi|312880334|ref|ZP_07740134.1| flagella basal body P-ring formation protein FlgA [Aminomonas
           paucivorans DSM 12260]
 gi|310783625|gb|EFQ24023.1| flagella basal body P-ring formation protein FlgA [Aminomonas
           paucivorans DSM 12260]
          Length = 312

 Score = 84.9 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 1/152 (0%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           M  V   +  S        +        VV    +  GE +    +  +++   +     
Sbjct: 157 MRSVSLNVATSEEPARFVRVVLRWYQPQVVAKSPLRKGETIRREDV-FLRLGIQDTYRLL 215

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
           AHS + V G V R  +     + + VL R  V+  G +V +    G++ +   G AL   
Sbjct: 216 AHSFQQVEGKVLRIPVKAGVPVAMEVLVRDEVVHAGNQVVLSSVVGSVAVEAKGRALEQG 275

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           ++GD I V+N+DT  +VSG V+  G V ++ K
Sbjct: 276 AVGDTIRVRNLDTRQIVSGVVIGPGRVEILQK 307


>gi|56413840|ref|YP_150915.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|167553040|ref|ZP_02346790.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|197362763|ref|YP_002142400.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56128097|gb|AAV77603.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197094240|emb|CAR59745.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|205322449|gb|EDZ10288.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 219

 Score = 84.9 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTSANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|332704822|ref|ZP_08424910.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554971|gb|EGJ52015.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 328

 Score = 84.5 bits (208), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 10/123 (8%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRRVLLPDHVIPLSV 86
            S  +N GE +    +   +   +  RG          G       +R +  +    L +
Sbjct: 211 ASRPVNPGEAITPDMVTFQEKNLAYFRG------APWDGKGGPWQVKRPVGTEQPFSLDI 264

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L    ++ +G+ V ++    ++ ++    A+    +G+ I V+NI +G +V   V+   T
Sbjct: 265 LEPVPLVVKGSTVNLVYQGRHVQLAIQAEAMQAGGLGETIPVRNIHSGKLVQAVVMSKDT 324

Query: 147 VRV 149
           V V
Sbjct: 325 VAV 327


>gi|255603613|ref|XP_002538081.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
 gi|223513891|gb|EEF24302.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
          Length = 288

 Score = 84.5 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           ++LYV +   ++    G   V  + ++ G  +  + +       S +       +  + G
Sbjct: 152 WTLYVQADVQVW----GEYAVTGLPVSQGSPVQTTDVVMQSGDLSKLPAGIITDLSMLEG 207

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 L    V+   +L    VI +G  V++        IS  G A+  A++G V+ VK
Sbjct: 208 KQAALNLPLGTVLRPELLKSVPVIKQGQTVQLNSRGDGFVISADGTAMQTANVGQVVDVK 267

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
            + +G +V G    +G V V
Sbjct: 268 -VSSGQIVKGVAQSSGKVDV 286


>gi|313650479|gb|EFS14886.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri 2a str. 2457T]
 gi|332761415|gb|EGJ91699.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri K-671]
 gi|332767677|gb|EGJ97870.1| flagella basal body P-ring formation protein FlgA [Shigella
           flexneri 2930-71]
 gi|333019308|gb|EGK38591.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri K-304]
          Length = 156

 Score = 84.5 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I L+   + + +  G +V +I +    + +  G AL++A++     V+ + +  +VSG
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVVSG 144

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 145 VVDADGNILI 154


>gi|213865509|ref|ZP_03387628.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 219

 Score = 84.1 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I     ++++  G A+++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGVSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|167576658|ref|ZP_02369532.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis TXDOH]
          Length = 253

 Score = 84.1 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A +     V +  ++A E +    L+  + T +++  +      + +G  +RR 
Sbjct: 109 TKLTARAQITATIPVAARDLDARETIAAGDLRTARRTLTSLT-DTVTRADEAIGRTSRRS 167

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI V+      
Sbjct: 168 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRVRVGTRKD 227

Query: 135 -VMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 228 AKVVTVRVTGPGTAEPIAQ 246


>gi|74317656|ref|YP_315396.1| flagellar basal body P-ring biosynthesis protein FlgA [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057151|gb|AAZ97591.1| putative flagella basal body P-ring formation protein [Thiobacillus
           denitrificans ATCC 25259]
          Length = 237

 Score = 83.8 bits (206), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++Y+ +   L A+      V    + A  VL E+ L   +    N+  + A  +  ++G
Sbjct: 101 WTVYLGADVRLIAA----YAVTRHPVPANHVLTEADLTLREGNLGNLPTDVARDVGALLG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             T   L     +  ++L  P  + +G   R++L     ++ T G AL++A  G+ + VK
Sbjct: 157 YRTVSGLAAGAPLRAALLRAPLAVQQGQTTRLVLNGPGFSVQTEGQALANAGRGERVRVK 216

Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
              +G +VSG   D   V V 
Sbjct: 217 -TRSGQVVSGVAQDGQQVVVA 236


>gi|324113867|gb|EGC07841.1| flagella basal body P-ring formation protein FlgA [Escherichia
           fergusonii B253]
          Length = 156

 Score = 83.8 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
              G+ VV +  I  G V+N S +   +     +       +  V   ++ R + P   +
Sbjct: 29  QASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPGQPV 88

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            L++L + + I  G +V++I       ++  G AL++A++     V+ + +G +VSG V 
Sbjct: 89  QLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSGIVG 147

Query: 143 DTGTVRV 149
             G + +
Sbjct: 148 ADGNILI 154


>gi|72122783|gb|AAZ64969.1| Flageller protein FlgA [Ralstonia eutropha JMP134]
          Length = 290

 Score = 83.8 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+    V    +  GE +  + L+  Q   S +          VVG VT   +     +
Sbjct: 164 SVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAAGSPM 223

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L +   +  G  V + +      I++ G  L+DA+IG+ + ++ +  G +VSG V 
Sbjct: 224 RTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVSGLVR 282

Query: 143 DTGTV 147
              TV
Sbjct: 283 SGDTV 287


>gi|325497620|gb|EGC95479.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           fergusonii ECD227]
          Length = 156

 Score = 83.4 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV +  I  G V+N S +   +     +       +  V   ++ R + P 
Sbjct: 26  VNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPG 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L++L + + I  G +V++I       ++  G AL++A++     V+ + +G +VSG
Sbjct: 86  QPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSG 144

Query: 140 SVVDTGTVRV 149
            V   G + +
Sbjct: 145 IVGADGNILI 154


>gi|209545586|ref|YP_002277815.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533263|gb|ACI53200.1| flagella basal body P-ring formation protein FlgA
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 326

 Score = 83.4 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 +V +  ++A  VL+ S ++        +          + G+     ++    +
Sbjct: 168 HAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMHNVVAGQPV 227

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               LHR  V+ +G  + I  T   + ++  G AL D   G  +   N+ +G++V+G V 
Sbjct: 228 LDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSGMIVTGRVT 287

Query: 143 DTGTVRV 149
               ++V
Sbjct: 288 SASEIQV 294


>gi|162147477|ref|YP_001601938.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786054|emb|CAP55636.1| putative flagellar protein flgA precursor [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 325

 Score = 83.4 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 +V +  ++A  VL+ S ++        +          + G+     ++    +
Sbjct: 167 HAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMHNVVAGQPV 226

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               LHR  V+ +G  + I  T   + ++  G AL D   G  +   N+ +G++V+G V 
Sbjct: 227 LDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSGMIVTGRVT 286

Query: 143 DTGTVRV 149
               ++V
Sbjct: 287 SASEIQV 293


>gi|295097207|emb|CBK86297.1| flagella basal body P-ring formation protein FlgA [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 232

 Score = 83.4 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S  G   V S  +  GE++ +  +  M  +  ++        +D+VG    R L     +
Sbjct: 103 SAQGTFWVASHSLKGGEIVQQGDITPMTGSIDDLPVGLMFEARDIVGQRLLRPLSAGKPV 162

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             + L + + +  G  V ++++     I + G AL++A++ D + VK    G  V+G V 
Sbjct: 163 LQNQLRQQWRLRAGQTVELVMSGPGFFIRSQGKALNNAAVDDTLRVK-TTGGRNVTGKVG 221

Query: 143 DTGTVRVVVK 152
             G V + ++
Sbjct: 222 RDGAVTIFLE 231


>gi|204930732|ref|ZP_03221605.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204320191|gb|EDZ05395.1| flagella basal body P-ring formation protein FlgA [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 219

 Score = 83.4 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 149 LPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|237751781|ref|ZP_04582261.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           bilis ATCC 43879]
 gi|229373147|gb|EEO23538.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           bilis ATCC 43879]
          Length = 221

 Score = 83.0 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 53/119 (44%), Gaps = 1/119 (0%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  I AG  +  +         S++      S  +++    +  +  + +I  + L + 
Sbjct: 103 ATESIRAGSNITTNSFMTKTQDFSSLA-LIPASRYEILQSSAKVYIPVNTIIYRNKLAKR 161

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            ++S+ + V+II     +  S +G AL +   GD I ++N+++   ++  V+    V++
Sbjct: 162 MLVSKDSNVKIIFRDNGIEASASGRALENGVQGDTIKIENLESKRTINAKVIAENVVQI 220


>gi|78358197|ref|YP_389646.1| FlgA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220602|gb|ABB39951.1| FlgA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 343

 Score = 83.0 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRR 74
           S+F  V       +  +N G++L    +  ++   + +RG          G        R
Sbjct: 214 SVFVDVWTGVPAAAFPVNRGDLLGPDAVTMVRKNRAFMRG------DPWDGKGGPWRLTR 267

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
            +    VI  + L     ++RG +V ++     + ++    AL+D + GD I V+N+ + 
Sbjct: 268 AVGQGQVIYAADLEIMPTVARGDRVDLVFRGSRILLTVPAEALADGAAGDSIPVRNLQSR 327

Query: 135 VMVSGSVVDTGTVRV 149
             V  +V D  TV V
Sbjct: 328 RQVYATVKDPTTVIV 342


>gi|89069817|ref|ZP_01157152.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           granulosus HTCC2516]
 gi|89044618|gb|EAR50734.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
           granulosus HTCC2516]
          Length = 136

 Score = 83.0 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I A E++  + L                    +VG   R  +     +  + + 
Sbjct: 18  LVATRTIRAQEIIAAADLALDAAEF----AGGTSDAALLVGQEARVAIYAGRPVRPADVG 73

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
            P ++ R A + +I     +TIST G AL  A+ G++I V N+ +   V+  +   G
Sbjct: 74  PPAIVERNAILPLIYNSNGLTISTDGRALDRAASGEIIRVMNLSSRTTVTARIGPDG 130


>gi|161611269|ref|YP_299813.2| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
           eutropha JMP134]
          Length = 249

 Score = 83.0 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+    V    +  GE +  + L+  Q   S +          VVG VT   +     +
Sbjct: 123 SVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAAGSPM 182

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L +   +  G  V + +      I++ G  L+DA+IG+ + ++ +  G +VSG V 
Sbjct: 183 RTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVSGLVR 241

Query: 143 DTGTV 147
              TV
Sbjct: 242 SGDTV 246


>gi|171059416|ref|YP_001791765.1| flagella basal body P-ring formation protein FlgA [Leptothrix
           cholodnii SP-6]
 gi|170776861|gb|ACB35000.1| flagella basal body P-ring formation protein FlgA [Leptothrix
           cholodnii SP-6]
          Length = 255

 Score = 82.6 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 5/151 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C    + +++Y+     ++    G AVV +  + A  VL  + L+  +V  +      
Sbjct: 110 LRCTEGPVAWNVYLPVTVRVW----GQAVVTAGSLPADTVLGAADLRLGEVDLAEQASPA 165

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             S+ +++G    R L P   +    L      + G  VR+I       +S+   A+S  
Sbjct: 166 YTSMAELIGRRVARALPPGATLRADSLRARQWFAAGDTVRVITQGTGFAVSSEAQAMSPG 225

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G    ++  ++G ++S   V      V +
Sbjct: 226 LEGQPARLR-TESGRILSAWPVGERRAEVRM 255


>gi|205353089|ref|YP_002226890.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205272870|emb|CAR37799.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628169|gb|EGE34512.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 219

 Score = 82.6 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 89  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G  +++A++     V+ + +G +VSG
Sbjct: 149 QPVQLTMIRQAWRVEAGQRVQVIANGEGFSVNAEGQVMNNAAVAQNARVR-MTSGQIVSG 207

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 208 TVDSDGNILI 217


>gi|304392505|ref|ZP_07374445.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
           R2A130]
 gi|303295135|gb|EFL89495.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
           R2A130]
          Length = 135

 Score = 82.6 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 1/128 (0%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDH 80
           A      +VP   I  GE +  S L+ ++V      R     + +D +G V    LL   
Sbjct: 5   ALAQDQVLVPVRTIYPGETITASDLRLVEVAAGRERRQGVLRNWEDGIGRVATATLLARR 64

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            I    L  P+ +  G  VR+   +  +TI T G AL   ++G  IAV++     +    
Sbjct: 65  YIVTRTLVVPHAVKVGEVVRVTFRRAGLTIETKGQALQSGAVGKAIAVRSRGNAKVYQAV 124

Query: 141 VVDTGTVR 148
           +   G V 
Sbjct: 125 ITAPGMVE 132


>gi|134095101|ref|YP_001100176.1| basal-body periplasmic P ring assembly protein [Herminiimonas
           arsenicoxydans]
 gi|133739004|emb|CAL62052.1| Flagella basal body P-ring formation protein FlgA precursor
           [Herminiimonas arsenicoxydans]
          Length = 235

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +       V G  +  +  ++ G+ + +  +  ++   + +           +G
Sbjct: 99  WTIYVQAKV----QVHGEYIAAAAPLSQGQTIGQGDIATLKGDLTTLPAGVITDASQAIG 154

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 +     +    L     I +G  VR+++     ++S+   AL++A+ G +  V+
Sbjct: 155 RTAATTVALGAPLRQDALRNQQAIQQGQAVRVVVNGAGFSVSSEARALNNANEGQLTQVR 214

Query: 130 NIDTGVMVSGSVVDTGTVR 148
               G ++SG     G V 
Sbjct: 215 -TPAGQVISGIAKLGGIVE 232


>gi|317153843|ref|YP_004121891.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944094|gb|ADU63145.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 338

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 7/133 (5%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG--LVTRRVL 76
           ++F  +     V +  +N  E +    +  M++        Y   + D VG      R L
Sbjct: 210 TVFVDIWKAVPVAAKPLNRFERVTTDNVTFMRMNL-----AYNPDLWDGVGGPWRMARTL 264

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
             +    +S L R  +I +G +V ++     + +S    AL +A +G  ++V+N+ +  +
Sbjct: 265 GRNQPFSMSHLERVPLIEKGDRVNLVFQSQRVQLSMKAEALGEADMGQQVSVRNLQSNKV 324

Query: 137 VSGSVVDTGTVRV 149
           +  +VV   TV V
Sbjct: 325 ILATVVGNNTVMV 337


>gi|167626151|ref|YP_001676445.1| SAF domain-containing protein [Shewanella halifaxensis HAW-EB4]
 gi|167356173|gb|ABZ78786.1| SAF domain [Shewanella halifaxensis HAW-EB4]
          Length = 248

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +SLYV +  S+   +     V + V+  GE +  + +    V       +    + ++VG
Sbjct: 111 WSLYVRASVSVSVKIP----VANRVLKRGEHILAADIDWKVVKLRPSDRDLVTGLDEIVG 166

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
               R +     I    L  P  ++ G +V I         +  G AL     G  I V+
Sbjct: 167 RQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVR 226

Query: 130 NIDTGVMVSGSVVDTGTVRV 149
           N+ +G ++S   +  G V  
Sbjct: 227 NLSSGKVISAYPIAKGRVET 246


>gi|295688783|ref|YP_003592476.1| flagella basal body P-ring formation protein FlgA [Caulobacter
           segnis ATCC 21756]
 gi|295430686|gb|ADG09858.1| flagella basal body P-ring formation protein FlgA [Caulobacter
           segnis ATCC 21756]
          Length = 254

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 2/118 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  + AGE++    L  +++  +    +       V+GL  +R L     +    +    
Sbjct: 120 ARSMTAGEIVQPEDLVWVKM--AGAPADAPRDADAVIGLAAKRPLREGAAVSQRDVGAAQ 177

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+  G  + +  + G +++S  G A+S AS G+V AV+N  +  ++    +  G   V
Sbjct: 178 VVKTGDLITVTYSDGGISLSLQGKAMSAASTGEVFAVQNTASKKIIQAVAIGPGAAAV 235


>gi|46578929|ref|YP_009737.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448341|gb|AAS94996.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 310

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 2/131 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           + F  V       +  +N G+ L   ++  M+   +++R               +R +  
Sbjct: 181 TAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAAPWDGRGGP--WQLQRPVGA 238

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             V+    +     ++RG  V ++     + ++  G AL+D   G+ I V+N+ +   V 
Sbjct: 239 GQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALADGMPGETIQVRNLQSRKQVY 298

Query: 139 GSVVDTGTVRV 149
            +V D  TV V
Sbjct: 299 ATVRDGSTVVV 309


>gi|120603470|ref|YP_967870.1| FlgA family protein [Desulfovibrio vulgaris DP4]
 gi|120563699|gb|ABM29443.1| FlgA family protein [Desulfovibrio vulgaris DP4]
 gi|311232787|gb|ADP85641.1| flagellar basal body P-ring formation protein FlgA [Desulfovibrio
           vulgaris RCH1]
          Length = 324

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 2/131 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           + F  V       +  +N G+ L   ++  M+   +++R               +R +  
Sbjct: 195 TAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAAPWDGRGGP--WQLQRPVGA 252

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             V+    +     ++RG  V ++     + ++  G AL+D   G+ I V+N+ +   V 
Sbjct: 253 GQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALADGMPGETIQVRNLQSRKQVY 312

Query: 139 GSVVDTGTVRV 149
            +V D  TV V
Sbjct: 313 ATVRDGSTVVV 323


>gi|124268258|ref|YP_001022262.1| flagellar basal body P-ring biosynthesis protein [Methylibium
           petroleiphilum PM1]
 gi|124261033|gb|ABM96027.1| flagellar basal body P-ring biosynthesis protein [Methylibium
           petroleiphilum PM1]
          Length = 239

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 67/151 (44%), Gaps = 5/151 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C++    +++Y+     ++    G A+V +  + AG VL  + L+E ++  +      
Sbjct: 94  LRCLQGEKKWNVYLPITVRVY----GRALVAASALPAGTVLTAADLREAEIDLAADPAAA 149

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
               ++ +G    R++     +  ++L      + G  V+++      ++ + G A++  
Sbjct: 150 LTDPQEAIGRSLLRMVSAGEDLRQNLLRARQWFAAGETVQLVAVGPGFSVQSEGQAITPG 209

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
             G  + V+  ++G +V+G  V    V + +
Sbjct: 210 LDGSPVRVR-TESGRIVTGLPVGERRVELRL 239


>gi|167614833|ref|ZP_02383468.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis Bt4]
 gi|257141418|ref|ZP_05589680.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
          Length = 248

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   + T +++  +      + +G  +RR 
Sbjct: 104 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 162

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI ++      
Sbjct: 163 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 222

Query: 135 -VMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 223 AKVVTVRVTGPGTAEPIAQ 241


>gi|83717277|ref|YP_438385.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
 gi|83651102|gb|ABC35166.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           thailandensis E264]
          Length = 257

 Score = 81.8 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   + T +++  +      + +G  +RR 
Sbjct: 113 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 171

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI ++      
Sbjct: 172 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 231

Query: 135 -VMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 232 AKVVTVRVTGPGTAEPIAQ 250


>gi|188592113|ref|YP_001796711.1| flagellar basal body p-ring biosynthesis protein flga [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938487|emb|CAP63474.1| FlgA: Flagella basal body P-ring formation protein ; signal peptide
           [Cupriavidus taiwanensis LMG 19424]
          Length = 260

 Score = 81.4 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           SV+    V +  + AGE + ++ ++  Q     +          + G VT   +     +
Sbjct: 134 SVLTDYYVAARALGAGEPVGQADVEIRQGDLGALPRAVITDPAQLAGAVTANRIAAGSPL 193

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              +L +   + +G  V + +      I++ G  L+DA+ G+ + V+ +  G +V+G V 
Sbjct: 194 RTDLLRKAIAVRQGQTVTVAVEGAAFQITSEGKVLADAATGNTVQVR-LRNGQVVNGLVR 252

Query: 143 DTGTV 147
              TV
Sbjct: 253 SGDTV 257


>gi|197104380|ref|YP_002129757.1| distal basal-body ring component protein FlaD [Phenylobacterium
           zucineum HLK1]
 gi|196477800|gb|ACG77328.1| distal basal-body ring component protein FlaD [Phenylobacterium
           zucineum HLK1]
          Length = 252

 Score = 81.1 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  I AGEV+  + L   +   +            V+G+  RR L     +    +    
Sbjct: 119 ARSIAAGEVIQPADLVWGKAAAAPADAPSDPDA--VIGMAARRPLREGAAVAGRDIAALE 176

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+  G  V +      +++S    ALS  + G+ I V+N  +  +V   V   G   V
Sbjct: 177 VVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAV 234


>gi|284007177|emb|CBA72463.1| flagellar basal body P-ring biosynthesis protein FlgA [Arsenophonus
           nasoniae]
          Length = 224

 Score = 81.1 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 1/133 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           L  SV G+  V +  I    V+N+  +   +     +       I   +  V+ R +   
Sbjct: 92  LAVSVEGNYWVANQPIKRHSVINQHNVVAKRGLLEKLPRGIIRDIHAYINSVSLRDIAAG 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I  ++L R +VI  G  V +     +  +   G A+++A+  + + +K + TG +++ 
Sbjct: 152 QPISQNMLRRAWVIQAGKHVTVYAQGRHFQVKYEGKAINNAAENESVRLK-MPTGQIITA 210

Query: 140 SVVDTGTVRVVVK 152
                G  ++ +K
Sbjct: 211 IAQKEGYAKITLK 223


>gi|326623713|gb|EGE30058.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 156

 Score = 81.1 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 26  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 86  QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 144

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 145 TVDSDGNILI 154


>gi|323697473|ref|ZP_08109385.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           sp. ND132]
 gi|323457405|gb|EGB13270.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           desulfuricans ND132]
          Length = 337

 Score = 80.7 bits (198), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +FA V     V S  +N  E +   ++   ++  +  R  +  +          R L 
Sbjct: 208 AVVFADVWKAVPVASRPMNRMERVTRDKVSFKRMNLAYNRDVWDGTGGPW---RMARTLG 264

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
              V  LS L    +I RG  V ++     + +S    A+ +A  G  + V+NI +  ++
Sbjct: 265 RGQVFTLSHLEPVPLIERGEMVNLVYNGRGIHLSIKAEAMGEAGAGQQVEVRNIQSNKII 324

Query: 138 SGSVVDTGTVRV 149
             +VVD  TV V
Sbjct: 325 LATVVDGETVVV 336


>gi|300938637|ref|ZP_07153366.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
 gi|300456422|gb|EFK19915.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 21-1]
          Length = 219

 Score = 80.7 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  GE L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|332527905|ref|ZP_08403941.1| flagella basal body P-ring formation protein FlgA [Rubrivivax
           benzoatilyticus JA2]
 gi|332112481|gb|EGJ12274.1| flagella basal body P-ring formation protein FlgA [Rubrivivax
           benzoatilyticus JA2]
          Length = 185

 Score = 80.3 bits (197), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 1/135 (0%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
               +   V G  VV    +  G VL   +L   +V  +        S++ + G    R 
Sbjct: 51  VFLPITVEVWGPGVVAVTALAPGTVLAPGQLALGEVDWAAAATPPLASVQALEGRTLARP 110

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L P   + L  L      + G  V ++       +ST G AL     G ++ V+  + G 
Sbjct: 111 LAPGQALRLDALKPREWFAAGEVVSVVARGDGYAVSTRGEALMRGVEGRLVRVR-TEAGR 169

Query: 136 MVSGSVVDTGTVRVV 150
           +V+G     G V V 
Sbjct: 170 IVTGWPTAEGRVDVA 184


>gi|222032825|emb|CAP75564.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           LF82]
 gi|312945634|gb|ADR26461.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O83:H1 str. NRG 857C]
          Length = 219

 Score = 80.3 bits (197), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  GE L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + I  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRIKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|254299690|ref|ZP_04967139.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
 gi|157809683|gb|EDO86853.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 406e]
          Length = 233

 Score = 80.3 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   + T +++  +      + +G  +RR 
Sbjct: 89  TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI ++      
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207

Query: 134 GVMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226


>gi|149927794|ref|ZP_01916045.1| Flageller protein FlgA [Limnobacter sp. MED105]
 gi|149823416|gb|EDM82647.1| Flageller protein FlgA [Limnobacter sp. MED105]
          Length = 238

 Score = 79.9 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 1/148 (0%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           VR     S        +   V    +V    I +G+ L  + ++   +  S +   +   
Sbjct: 92  VRVQCVGSDTAPFFVGVDVKVWAPVLVVKGTIQSGQTLGLNDVEFRTMDLSQLSHGWVSD 151

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           +  +      R L P  ++    L    ++  G  V++++      I    +A+ +A +G
Sbjct: 152 LAHLNNKTAARQLWPGTLLKHDYLRGQALVKNGDTVKVMMKGPGFAIGGTAVAMGEAELG 211

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           +V+ +K    G ++ G   D   V V +
Sbjct: 212 EVVKIKTTQ-GKILHGVARDALLVEVSL 238


>gi|329296223|ref|ZP_08253559.1| flagellar basal body P-ring biosynthesis protein FlgA [Plautia
           stali symbiont]
          Length = 115

 Score = 79.9 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 37  AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
            GE L+   L+ +    + +        + +VG V  R L    ++    L R + I +G
Sbjct: 1   PGETLSADDLRSVSGDLAALPPGALLQQQALVGQVPLRALAAGQILTQGQLRRSWRIRQG 60

Query: 97  AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +V I+       + + G AL++A++G  +AVK    G  V G V   G +
Sbjct: 61  EEVDIVAQGQGFRLRSKGKALNNAAVGQTLAVK-TAAGQRVQGVVSADGKI 110


>gi|167905086|ref|ZP_02492291.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei NCTC 13177]
          Length = 233

 Score = 79.9 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   + T +++  +      + +G  +RR 
Sbjct: 89  TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI ++      
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207

Query: 134 GVMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226


>gi|167725926|ref|ZP_02409162.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei DM98]
          Length = 233

 Score = 79.5 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   + T +++  +      + +G  +RR 
Sbjct: 89  TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
           L    V+   +L  P +I RG  VRI+   G   I   GIA+   +  DVI ++      
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQSGAQDDVIRLRVGTRRD 207

Query: 134 GVMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226


>gi|324007912|gb|EGB77131.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 57-2]
          Length = 240

 Score = 79.5 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  GE L    +K  +     +       I  +V  V+ R L PD
Sbjct: 110 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGYGFSANAEGQALNNAAVAQNARVR 219


>gi|194432426|ref|ZP_03064713.1| flagella basal body P-ring formation protein FlgA [Shigella
           dysenteriae 1012]
 gi|194419313|gb|EDX35395.1| flagella basal body P-ring formation protein FlgA [Shigella
           dysenteriae 1012]
          Length = 240

 Score = 79.5 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 110 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 169

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219


>gi|300918674|ref|ZP_07135255.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 115-1]
 gi|300414168|gb|EFJ97478.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 115-1]
          Length = 240

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 110 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 169

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219


>gi|213616006|ref|ZP_03371832.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 135

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 5   VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 64

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             + L+++ + + +  G +V++I      +++  G A+++A++     V+ + +G +VSG
Sbjct: 65  QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 123

Query: 140 SVVDTGTVRV 149
           +V   G + +
Sbjct: 124 TVDSDGNILI 133


>gi|167567746|ref|ZP_02360662.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           oklahomensis EO147]
 gi|167574697|ref|ZP_02367571.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           oklahomensis C6786]
          Length = 256

 Score = 79.1 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 3/137 (2%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
                   A+V     V +  I A + +    L +     +++  +     +D +G  +R
Sbjct: 110 APFRLIARATVKATVPVAARDIEARQPIVADDLADEPRDIASLT-DTVTRAEDAIGRSSR 168

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NI 131
           R +    ++    L  P +I RG  VR++   G   I   G+A+      DVI V+    
Sbjct: 169 RAVHAGQILRRRHLQTPELIRRGQTVRVVARVGRAEIVNTGVAMQSGGKDDVIRVRVGGR 228

Query: 132 DTGVMVSGSVVDTGTVR 148
                V   +   GT  
Sbjct: 229 SNHKTVDVRITAAGTAE 245


>gi|134280881|ref|ZP_01767591.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
 gi|134247903|gb|EBA47987.1| flagella basal body P-ring formation protein FlgA [Burkholderia
           pseudomallei 305]
          Length = 233

 Score = 79.1 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 3/139 (2%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +  +  A V     V +  ++A E +    L   +   +++  +      + +G  +RR 
Sbjct: 89  TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRILTSLT-DTVTRADEAIGRTSRRS 147

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
           L    V+   +L  P +I RG  VRI+   G   I   GIA+ + +  DVI ++      
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207

Query: 134 GVMVSGSVVDTGTVRVVVK 152
             +V+  V   GT   + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226


>gi|331667472|ref|ZP_08368336.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
 gi|331065057|gb|EGI36952.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA271]
          Length = 219

 Score = 79.1 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|222823746|ref|YP_002575320.1| flagellar basal body P-ring formation protein FlgA, [Campylobacter
           lari RM2100]
 gi|222538968|gb|ACM64069.1| flagellar basal body P-ring formation protein FlgA, putative
           [Campylobacter lari RM2100]
          Length = 228

 Score = 78.7 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 2/128 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +  +  I+  E L+ +  K +++              ++  L+ +  +  + 
Sbjct: 101 FLKAKLEVLQSTRPISRNENLSPASFKILKIPFDKAPQGILK-KDEIANLIAKSNIRENM 159

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   V  ++  G++++     AL   ++   I +KN D G +V G 
Sbjct: 160 ILKYNMFKTKTLIQRNDSVYGVIKDGDLSMIIELKALQSGNLNQRIRLKNKD-GKVVHGK 218

Query: 141 VVDTGTVR 148
           V+    V 
Sbjct: 219 VISKNYVE 226


>gi|16129035|ref|NP_415590.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107918|ref|AP_001698.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K-12 substr. W3110]
 gi|170080723|ref|YP_001730043.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194438113|ref|ZP_03070206.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           101-1]
 gi|238900326|ref|YP_002926122.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli BW2952]
 gi|253773904|ref|YP_003036735.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161178|ref|YP_003044286.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli B str. REL606]
 gi|256023230|ref|ZP_05437095.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           sp. 4_1_40B]
 gi|297516831|ref|ZP_06935217.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli OP50]
 gi|300928376|ref|ZP_07143910.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 187-1]
 gi|300950167|ref|ZP_07164112.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 116-1]
 gi|300954388|ref|ZP_07166842.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 175-1]
 gi|301644984|ref|ZP_07244950.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|307137707|ref|ZP_07497063.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli H736]
 gi|331641616|ref|ZP_08342751.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H736]
 gi|2494513|sp|P75933|FLGA_ECOLI RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|1787312|gb|AAC74156.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062649|dbj|BAA35880.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K12 substr. W3110]
 gi|169888558|gb|ACB02265.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194423049|gb|EDX39043.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           101-1]
 gi|238860029|gb|ACR62027.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli BW2952]
 gi|242376876|emb|CAQ31593.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Escherichia coli BL21(DE3)]
 gi|253324948|gb|ACT29550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973079|gb|ACT38750.1| flagellar basal body P-ring biosynthesis protein A [Escherichia
           coli B str. REL606]
 gi|253977293|gb|ACT42963.1| flagellar basal body P-ring biosynthesis protein A [Escherichia
           coli BL21(DE3)]
 gi|260449788|gb|ACX40210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           DH1]
 gi|300318624|gb|EFJ68408.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 175-1]
 gi|300450514|gb|EFK14134.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 116-1]
 gi|300463634|gb|EFK27127.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 187-1]
 gi|301076713|gb|EFK91519.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 146-1]
 gi|309701344|emb|CBJ00645.1| flagellar basal body P-ring protein [Escherichia coli ETEC H10407]
 gi|315135704|dbj|BAJ42863.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli DH1]
 gi|315618242|gb|EFU98832.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           3431]
 gi|323937812|gb|EGB34076.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E1520]
 gi|323942541|gb|EGB38708.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E482]
 gi|323962671|gb|EGB58249.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H489]
 gi|331038414|gb|EGI10634.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H736]
          Length = 219

 Score = 78.7 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|42522135|ref|NP_967515.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
 gi|39574666|emb|CAE78508.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
          Length = 310

 Score = 78.4 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V + +I  GE +    L+      +  +      ++D+ G +  R L     +  S L R
Sbjct: 191 VTTRLILQGERVQADDLRMSMTDVTFAKDGSL-RMEDIQGQMAARSLPVGSTVWASDLKR 249

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
                +G  V+ +L   +  IS   +A     +GD+I VKN++T  ++SG V + G V+
Sbjct: 250 EPAAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVLSGLVTEKGVVK 308


>gi|157160599|ref|YP_001457917.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli HS]
 gi|170020532|ref|YP_001725486.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli ATCC 8739]
 gi|157066279|gb|ABV05534.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           HS]
 gi|169755460|gb|ACA78159.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ATCC 8739]
          Length = 219

 Score = 78.4 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|323973339|gb|EGB68528.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA007]
          Length = 209

 Score = 78.4 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|331672592|ref|ZP_08373381.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA280]
 gi|331070235|gb|EGI41601.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA280]
          Length = 240

 Score = 78.4 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 110 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219


>gi|87306344|ref|ZP_01088491.1| putative flagella basal body P-ring formation protein
           [Blastopirellula marina DSM 3645]
 gi|87290523|gb|EAQ82410.1| putative flagella basal body P-ring formation protein
           [Blastopirellula marina DSM 3645]
          Length = 287

 Score = 78.4 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 45/111 (40%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A      V     I  GEV+    L    +      G++   I+ +VG    R L     
Sbjct: 134 AEGETLVVHTVRPIRRGEVIQAEDLTVQPLNTVRTDGDFETRIESLVGKEAIRSLPAQRP 193

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           I    +  P VI +   V +I   G + I    IA SDAS+GD++ V+ I 
Sbjct: 194 IESGSIREPVVIQQNDVVTVIAQIGGLVIRRDAIAASDASVGDLLMVQAIS 244


>gi|227886570|ref|ZP_04004375.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           83972]
 gi|300974376|ref|ZP_07172588.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 45-1]
 gi|301051144|ref|ZP_07197974.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 185-1]
 gi|227836774|gb|EEJ47240.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           83972]
 gi|300297165|gb|EFJ53550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 185-1]
 gi|300410619|gb|EFJ94157.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 45-1]
 gi|307553074|gb|ADN45849.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           ABU 83972]
 gi|315291066|gb|EFU50429.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 153-1]
          Length = 240

 Score = 78.0 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 49/110 (44%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  GE L    +K  +     +       I  +V  V+ R L PD
Sbjct: 110 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +   ++ +  G AL++A++     V+
Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 219


>gi|323174800|gb|EFZ60415.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           LT-68]
          Length = 212

 Score = 78.0 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 82  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 141

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 142 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 191


>gi|110805090|ref|YP_688610.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           flexneri 5 str. 8401]
 gi|331652125|ref|ZP_08353144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           M718]
 gi|110614638|gb|ABF03305.1| Flagellar basal body P-ring biosynthesis protein [Shigella flexneri
           5 str. 8401]
 gi|331050403|gb|EGI22461.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           M718]
          Length = 219

 Score = 77.6 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|191168474|ref|ZP_03030262.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B7A]
 gi|190901493|gb|EDV61254.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B7A]
          Length = 219

 Score = 77.6 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 4/132 (3%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
           +   +     L     D+ +  V     G+ VV ++ I  G  L    +K  +     + 
Sbjct: 67  NSRLWGNVNVLARCGNDTRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLP 126

Query: 58  GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
                 I  +V  ++ R L PD  I L+   + + +  G +V +I +    + +  G AL
Sbjct: 127 PRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQAL 186

Query: 118 SDASIGDVIAVK 129
           ++A++     V+
Sbjct: 187 NNAAVAQNARVR 198


>gi|307310150|ref|ZP_07589800.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|306909868|gb|EFN40362.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           W]
 gi|315060350|gb|ADT74677.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli W]
 gi|323379089|gb|ADX51357.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           KO11]
          Length = 219

 Score = 77.6 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|293409438|ref|ZP_06653014.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           B354]
 gi|331662478|ref|ZP_08363401.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA143]
 gi|331682574|ref|ZP_08383193.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H299]
 gi|284920895|emb|CBG33958.1| flagellar basal body P-ring protein [Escherichia coli 042]
 gi|291469906|gb|EFF12390.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           B354]
 gi|331060900|gb|EGI32864.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           TA143]
 gi|331080205|gb|EGI51384.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H299]
          Length = 219

 Score = 77.6 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|218704480|ref|YP_002411999.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli UMN026]
 gi|293404356|ref|ZP_06648350.1| flgA [Escherichia coli FVEC1412]
 gi|298380136|ref|ZP_06989741.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           FVEC1302]
 gi|300899591|ref|ZP_07117830.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
 gi|218431577|emb|CAR12456.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli UMN026]
 gi|291428942|gb|EFF01967.1| flgA [Escherichia coli FVEC1412]
 gi|298279834|gb|EFI21342.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           FVEC1302]
 gi|300356862|gb|EFJ72732.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 198-1]
          Length = 219

 Score = 77.6 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|320200967|gb|EFW75551.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli EC4100B]
          Length = 219

 Score = 77.6 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|157158222|ref|YP_001462306.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli E24377A]
 gi|193064598|ref|ZP_03045678.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E22]
 gi|193069445|ref|ZP_03050399.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E110019]
 gi|194428442|ref|ZP_03060982.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B171]
 gi|209918326|ref|YP_002292410.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli SE11]
 gi|218553651|ref|YP_002386564.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli IAI1]
 gi|218694606|ref|YP_002402273.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli 55989]
 gi|256018671|ref|ZP_05432536.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
           D9]
 gi|260843312|ref|YP_003221090.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O103:H2 str. 12009]
 gi|260854555|ref|YP_003228446.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O26:H11 str. 11368]
 gi|260867435|ref|YP_003233837.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O111:H- str. 11128]
 gi|293433362|ref|ZP_06661790.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           B088]
 gi|300816774|ref|ZP_07096994.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
 gi|300821147|ref|ZP_07101296.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 119-7]
 gi|300922598|ref|ZP_07138698.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 182-1]
 gi|301328558|ref|ZP_07221619.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 78-1]
 gi|309798066|ref|ZP_07692441.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 145-7]
 gi|331676863|ref|ZP_08377559.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H591]
 gi|332279740|ref|ZP_08392153.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
           D9]
 gi|157080252|gb|ABV19960.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E24377A]
 gi|192927850|gb|EDV82464.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E22]
 gi|192957193|gb|EDV87642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E110019]
 gi|194413494|gb|EDX29776.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B171]
 gi|209911585|dbj|BAG76659.1| flagellar basal body P-ring protein FlgA precursor [Escherichia
           coli SE11]
 gi|218351338|emb|CAU97044.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli 55989]
 gi|218360419|emb|CAQ97971.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli IAI1]
 gi|257753204|dbj|BAI24706.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O26:H11 str. 11368]
 gi|257758459|dbj|BAI29956.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O103:H2 str. 12009]
 gi|257763791|dbj|BAI35286.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
           [Escherichia coli O111:H- str. 11128]
 gi|291324181|gb|EFE63603.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           B088]
 gi|300421075|gb|EFK04386.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 182-1]
 gi|300526446|gb|EFK47515.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 119-7]
 gi|300530548|gb|EFK51610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 107-1]
 gi|300844950|gb|EFK72710.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 78-1]
 gi|308118349|gb|EFO55611.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 145-7]
 gi|323156879|gb|EFZ43013.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           EPECa14]
 gi|323185805|gb|EFZ71166.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           1357]
 gi|323947626|gb|EGB43630.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H120]
 gi|324017424|gb|EGB86643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 117-3]
 gi|324117357|gb|EGC11264.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           E1167]
 gi|331075552|gb|EGI46850.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           H591]
 gi|332102092|gb|EGJ05438.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
           D9]
          Length = 219

 Score = 77.6 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|254459586|ref|ZP_05073002.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
           bacterium HTCC2083]
 gi|206676175|gb|EDZ40662.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 245

 Score = 77.6 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
             AV   + +N G+ L  S ++   +   +    YA S   VVG V  + L P   +   
Sbjct: 117 AEAVYLKLPMNKGDRLKLSDVELRPIERLSSESVYA-SPDQVVGRVLGQSLTPSIAVMPR 175

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
            L R + +     + I + +G + + + G+AL    +GD I V+N+ +  ++ G ++   
Sbjct: 176 HLAREWSVQEEDILSIYIVRGGIEVVSTGVALQPGQLGDTIHVENLSSETVLIGRIIGEK 235

Query: 146 TVRVVVK 152
            V ++ K
Sbjct: 236 KVEIIAK 242


>gi|26247212|ref|NP_753252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli CFT073]
 gi|26107613|gb|AAN79812.1|AE016759_86 Flagella basal body P-ring formation protein flgA precursor
           [Escherichia coli CFT073]
          Length = 219

 Score = 77.2 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 49/110 (44%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  GE L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +   ++ +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 198


>gi|188494240|ref|ZP_03001510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
 gi|188489439|gb|EDU64542.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           53638]
          Length = 219

 Score = 77.2 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|301029714|ref|ZP_07192768.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 196-1]
 gi|312971208|ref|ZP_07785386.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           1827-70]
 gi|299877402|gb|EFI85613.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 196-1]
 gi|310336410|gb|EFQ01596.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           1827-70]
 gi|332092907|gb|EGI97975.1| flagella basal body P-ring formation protein flgA [Shigella
           dysenteriae 155-74]
 gi|332342617|gb|AEE55951.1| flagellar basal body P-ring formation protein FlgA [Escherichia
           coli UMNK88]
          Length = 156

 Score = 77.2 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135


>gi|293414367|ref|ZP_06657016.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B185]
 gi|291434425|gb|EFF07398.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           B185]
          Length = 219

 Score = 77.2 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++AS+     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNASVAQNARVR 198


>gi|15801189|ref|NP_287206.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 EDL933]
 gi|15830704|ref|NP_309477.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. Sakai]
 gi|168747152|ref|ZP_02772174.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4113]
 gi|168758636|ref|ZP_02783643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4401]
 gi|168764484|ref|ZP_02789491.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767731|ref|ZP_02792738.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4486]
 gi|168773917|ref|ZP_02798924.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783602|ref|ZP_02808609.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4076]
 gi|168790007|ref|ZP_02815014.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC869]
 gi|168802017|ref|ZP_02827024.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC508]
 gi|195935462|ref|ZP_03080844.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. EC4024]
 gi|208805981|ref|ZP_03248318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816357|ref|ZP_03257536.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822785|ref|ZP_03263104.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398728|ref|YP_002269918.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4115]
 gi|217328503|ref|ZP_03444585.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792454|ref|YP_003077291.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. TW14359]
 gi|261227023|ref|ZP_05941304.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261256257|ref|ZP_05948790.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. FRIK966]
 gi|291282092|ref|YP_003498910.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615]
 gi|12514610|gb|AAG55818.1|AE005317_7 flagellar biosynthesis; assembly of basal-body periplasmic P ring
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360914|dbj|BAB34873.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. Sakai]
 gi|187770424|gb|EDU34268.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4196]
 gi|188018189|gb|EDU56311.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999053|gb|EDU68039.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4076]
 gi|189354582|gb|EDU73001.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363110|gb|EDU81529.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4486]
 gi|189365539|gb|EDU83955.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370501|gb|EDU88917.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC869]
 gi|189375925|gb|EDU94341.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC508]
 gi|208725782|gb|EDZ75383.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4206]
 gi|208733005|gb|EDZ81693.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738270|gb|EDZ85953.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160128|gb|ACI37561.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. EC4115]
 gi|209773418|gb|ACI85021.1| flagella basal body P-ring formation protein FlgA [Escherichia
           coli]
 gi|209773420|gb|ACI85022.1| flagella basal body P-ring formation protein FlgA [Escherichia
           coli]
 gi|209773422|gb|ACI85023.1| flagella basal body P-ring formation protein FlgA [Escherichia
           coli]
 gi|209773424|gb|ACI85024.1| flagella basal body P-ring formation protein FlgA [Escherichia
           coli]
 gi|209773426|gb|ACI85025.1| flagella basal body P-ring formation protein FlgA [Escherichia
           coli]
 gi|217318930|gb|EEC27356.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591854|gb|ACT71215.1| assembly protein for flagellar basal-body periplasmic P ring
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761965|gb|ADD55926.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615]
 gi|320189754|gb|EFW64410.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli O157:H7 str. EC1212]
 gi|320637523|gb|EFX07323.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. G5101]
 gi|320643084|gb|EFX12285.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H- str. 493-89]
 gi|320648542|gb|EFX17197.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H- str. H 2687]
 gi|320653856|gb|EFX21930.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320659336|gb|EFX26905.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664471|gb|EFX31622.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli O157:H7 str. LSU-61]
 gi|326339294|gb|EGD63108.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli O157:H7 str. 1125]
 gi|326344746|gb|EGD68494.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
           coli O157:H7 str. 1044]
          Length = 219

 Score = 77.2 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|218677622|ref|ZP_03525519.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
           etli CIAT 894]
          Length = 66

 Score = 77.2 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 44/66 (66%)

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +   Y ++RG+ +R++ + G MTIS AG  L D + G +I  +N+D+GV+VSG+V+  GT
Sbjct: 1   MREAYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLADGT 60

Query: 147 VRVVVK 152
           + V  K
Sbjct: 61  IHVRAK 66


>gi|187730893|ref|YP_001880756.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           boydii CDC 3083-94]
 gi|187427885|gb|ACD07159.1| flagella basal body P-ring formation protein FlgA [Shigella boydii
           CDC 3083-94]
          Length = 219

 Score = 77.2 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|300902463|ref|ZP_07120445.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 84-1]
 gi|301304989|ref|ZP_07211091.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 124-1]
 gi|300405495|gb|EFJ89033.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 84-1]
 gi|300839707|gb|EFK67467.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 124-1]
 gi|315253873|gb|EFU33841.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 85-1]
          Length = 219

 Score = 77.2 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|170681963|ref|YP_001744109.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
           coli SMS-3-5]
 gi|170519681|gb|ACB17859.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           SMS-3-5]
          Length = 219

 Score = 76.8 bits (188), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R + PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDISPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|213585153|ref|ZP_03366979.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 117

 Score = 76.8 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
            +  G  L  + +   +     +       I+ +   V+ R L P   + L+++ + + +
Sbjct: 1   PVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRV 60

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             G +V++I      +++  G A+++A++     V+ + +G +VSG+V   G + +
Sbjct: 61  KAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSGTVDSDGNILI 115


>gi|74311634|ref|YP_310053.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           sonnei Ss046]
 gi|73855111|gb|AAZ87818.1| flagellar protein for assembly of basal-body periplasmic P ring
           [Shigella sonnei Ss046]
          Length = 219

 Score = 76.8 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVTQNARVR 198


>gi|333008272|gb|EGK27746.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri K-272]
 gi|333019762|gb|EGK39034.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri K-227]
          Length = 156

 Score = 76.8 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEADNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135


>gi|183220920|ref|YP_001838916.1| flagellar protein FlgAide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911016|ref|YP_001962571.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775692|gb|ABZ93993.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779342|gb|ABZ97640.1| Flagellar protein FlgA; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 313

 Score = 76.4 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 2/119 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A      I +  +L +  ++     +++    Y    ++ VG       LPD  I    +
Sbjct: 191 AYFTKREIPSKTILTDEDVEVRSFFSADSLREYTD--ENPVGKTALNGFLPDTAIEKKQV 248

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
              + I RG +V ++ T GN+ +     AL+  + G+ I + N+ +   +   V + G 
Sbjct: 249 RTLHTIERGQEVELVYTVGNLLLKIKTRALASGNRGEEIPLLNLASQKTIRARVQNEGV 307


>gi|333005620|gb|EGK25138.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri K-218]
          Length = 159

 Score = 76.0 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 29  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 88

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 89  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 138


>gi|320173524|gb|EFW48720.1| Flagellar basal-body P-ring formation protein FlgA [Shigella
           dysenteriae CDC 74-1112]
          Length = 156

 Score = 76.0 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135


>gi|323190583|gb|EFZ75855.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           RN587/1]
 gi|333004879|gb|EGK24399.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri VA-6]
          Length = 156

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135


>gi|323163753|gb|EFZ49572.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           E128010]
 gi|323175698|gb|EFZ61292.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           1180]
          Length = 156

 Score = 75.7 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135


>gi|329898293|ref|ZP_08272376.1| flagellar protein [gamma proteobacterium IMCC3088]
 gi|328920858|gb|EGG28301.1| flagellar protein [gamma proteobacterium IMCC3088]
          Length = 316

 Score = 75.3 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + ++ +  I  G+ L+        +       +      +V  L T R L     +  S 
Sbjct: 193 YVLISNGSITRGQRLSPELFTP-TIQTEQAPKDALLQGVEVKHLETTRDLTSGEYLRKSN 251

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
                 + +G  + + + +G ++I+    A     IG+VI ++NID+G +V G VVD G 
Sbjct: 252 TKPTLAVRKGEILTLSIVRGMISITAQVRASEGGKIGEVIELENIDSGNLVLGMVVDIGK 311

Query: 147 VR 148
           V 
Sbjct: 312 VE 313



 Score = 37.5 bits (86), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
             ++ G+ L+   + E Q  N  ++G+    I DV+G   +R +   +V+ +     
Sbjct: 120 RNLSEGDTLSRGDV-ERQAINHKLKGDMVTHIADVIGRSLKRSVKASNVVMVEDYEE 175


>gi|256830175|ref|YP_003158903.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium
           baculatum DSM 4028]
 gi|256579351|gb|ACU90487.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium
           baculatum DSM 4028]
          Length = 316

 Score = 75.3 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 2/131 (1%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
           ++FA V       + V+N G++L    +   +   + +           + +     +  
Sbjct: 187 TVFADVWKTVPCAARVLNRGDMLEPGLVGFARKNLAYMAREPWDGRNLPLRMTA--AVGE 244

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
             VI    +    V+++G  + +I     + ++    +L D  IG+ I V+N+ +  +V+
Sbjct: 245 GQVISADAVEFIPVVAKGQILTLIYAGQTLKLTVPVESLEDGGIGNTIRVRNMQSRRVVA 304

Query: 139 GSVVDTGTVRV 149
             VVD  TVRV
Sbjct: 305 AQVVDAETVRV 315


>gi|323165579|gb|EFZ51366.1| flagella basal body P-ring formation protein flgA [Shigella sonnei
           53G]
          Length = 156

 Score = 75.3 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 26  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLSPD 85

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 86  QPIQLTQFRQAWRVKAGQRVNVIASGNGFSANAEGQALNNAAVTQNARVR 135


>gi|332758229|gb|EGJ88552.1| flagella basal body P-ring formation protein flgA [Shigella
           flexneri 4343-70]
          Length = 146

 Score = 75.3 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 16  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 75

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 76  QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 125


>gi|126734108|ref|ZP_01749855.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. CCS2]
 gi|126716974|gb|EBA13838.1| putative flagellar basal-body P-ring formation protein FlgA
           [Roseobacter sp. CCS2]
          Length = 138

 Score = 75.3 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +      VV +  I A  V+    +    + N         + + ++G+  R  L     
Sbjct: 13  SPAAAETVVAARTIRAQSVITVDDI----IINEETTAAAIDAARAIIGMEARVALFVGRP 68

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           I    + +P V+ R   + ++  +  + IST G AL  A  G+VI V N+ +   VS  +
Sbjct: 69  ILPGDVGQPAVVERNQIIPLLFEKNGLVISTDGRALGRAGPGEVIRVMNVGSRATVSAMI 128

Query: 142 VDTG 145
            + G
Sbjct: 129 GNDG 132


>gi|323967013|gb|EGB62439.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           M863]
 gi|327253471|gb|EGE65109.1| flagella basal body P-ring formation protein flgA [Escherichia coli
           STEC_7v]
          Length = 219

 Score = 74.5 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 48/110 (43%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  ++  V+ R L P+
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLIDAVSLRDLSPE 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+ L + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QPIQLTQLRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|82544462|ref|YP_408409.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           boydii Sb227]
 gi|81245873|gb|ABB66581.1| assembly of basal-body periplasmic P ring [Shigella boydii Sb227]
 gi|320186982|gb|EFW61695.1| Flagellar basal-body P-ring formation protein FlgA [Shigella
           flexneri CDC 796-83]
 gi|332094040|gb|EGI99092.1| flagella basal body P-ring formation protein flgA [Shigella boydii
           3594-74]
          Length = 219

 Score = 74.5 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     ++
Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMR 198


>gi|301023259|ref|ZP_07187056.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 69-1]
 gi|300397104|gb|EFJ80642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
           MS 69-1]
          Length = 219

 Score = 74.5 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|315638956|ref|ZP_07894127.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter upsaliensis JV21]
 gi|315480985|gb|EFU71618.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter upsaliensis JV21]
          Length = 220

 Score = 74.5 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 2/116 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  I  G+ +     K + +    +  N   S +D+  L+ +  +  + ++  ++     
Sbjct: 104 TRAIKRGDRIGAFDYKIVMMDFDKVPSNAL-SKEDLNNLLAKNNISKNTILRQNMFKTTA 162

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +I R  +V  +L    + +    ++L  A++G+ I VK+ D G ++ G V+    V
Sbjct: 163 IIKRNDQVIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGIVMGKNRV 217


>gi|269792756|ref|YP_003317660.1| flagella basal body P-ring formation protein FlgA
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100391|gb|ACZ19378.1| flagella basal body P-ring formation protein FlgA
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 280

 Score = 74.5 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             V+   V+  G+V++  R+                S+ +V+G   R  +    V+  S 
Sbjct: 154 PVVLARDVMKRGDVVSWERVVLGLGEKRGF-EELPSSVDEVLGRRVRTPVRAWAVLRGSW 212

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           L     +  G  V ++   G +++S  G ++    +GD + V N+ T  +V+G V   G 
Sbjct: 213 LEGSSGVLGGQTVELVCRVGGVSVSAVGRSVDGGRVGDRVRVMNVQTRAIVTGVVEAPGV 272

Query: 147 VRV 149
           VRV
Sbjct: 273 VRV 275


>gi|320179229|gb|EFW54187.1| Flagellar basal-body P-ring formation protein FlgA [Shigella boydii
           ATCC 9905]
          Length = 219

 Score = 74.5 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 46/110 (41%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  ++ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++      +
Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARGR 198


>gi|296534162|ref|ZP_06896655.1| flagella basal body P-ring formation protein FlgA [Roseomonas
           cervicalis ATCC 49957]
 gi|296265508|gb|EFH11640.1| flagella basal body P-ring formation protein FlgA [Roseomonas
           cervicalis ATCC 49957]
          Length = 107

 Score = 74.1 bits (181), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 44/84 (52%)

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
             V+G    R L     +PLS L   + + R + V+++     ++++T+G AL D ++G 
Sbjct: 1   DAVLGRRIGRPLGAGQPVPLSELSAQHAVRRDSVVQLVHEASGLSLTTSGRALEDGALGA 60

Query: 125 VIAVKNIDTGVMVSGSVVDTGTVR 148
            I + N+  G ++ G V+  G VR
Sbjct: 61  TITILNLSNGAVLLGEVLAPGRVR 84


>gi|283850808|ref|ZP_06368094.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           sp. FW1012B]
 gi|283573731|gb|EFC21705.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           sp. FW1012B]
          Length = 325

 Score = 74.1 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 26  GHAVVPSVVINA--GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
               V    I    G  + +S     +   + I+G              RR +    VI 
Sbjct: 201 ARVPVAIKPIMPKDGAAVEQSAYVYERRNMAGIKGRIFEPGDSQ--WRARRGVGAGQVIM 258

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              +    ++ RG +V+++    ++ ++  G ALSD + G  I VKN  +   ++G V D
Sbjct: 259 ADEMEPMPLVLRGDQVKVVYEGRSLRLTLLGEALSDGAPGGRITVKNPKSTREITGIVRD 318

Query: 144 TGTVRV 149
             TV V
Sbjct: 319 RSTVVV 324


>gi|319944139|ref|ZP_08018417.1| flagella basal body P-ring formation protein FlgA [Lautropia
           mirabilis ATCC 51599]
 gi|319742633|gb|EFV95042.1| flagella basal body P-ring formation protein FlgA [Lautropia
           mirabilis ATCC 51599]
          Length = 312

 Score = 73.0 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 2/127 (1%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V G A+V    + AG V   +     +V  +            + G   +R L     +
Sbjct: 186 HVEGPALVARQQLAAGSVPQPADFSVQRVDWTRSPTPPLPIDTRLGGQELQRALAAGQSL 245

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
               L     I  G  V  I       I+T  IAL+ A  G  I V+    G ++SG V 
Sbjct: 246 HADHLRPAPSIRSGEVVAAIAEGDGFRIATDAIALASAGEGQSIRVR-TPGGKVLSGLVE 304

Query: 143 DTGTVRV 149
              TV++
Sbjct: 305 GK-TVKI 310


>gi|21672600|ref|NP_660667.1| flagella basal body P-ring formation protein [Buchnera aphidicola
           str. Sg (Schizaphis graminum)]
 gi|25008461|sp|Q8K9L0|FLGA_BUCAP RecName: Full=Flagella basal body P-ring formation protein flgA;
           Flags: Precursor
 gi|21623231|gb|AAM67878.1| flagella basal body P-ring formation protein [Buchnera aphidicola
           str. Sg (Schizaphis graminum)]
          Length = 222

 Score = 73.0 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 50/132 (37%), Gaps = 1/132 (0%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G  V+    I  G  +    L ++      +      + KD++  V  R + P 
Sbjct: 92  VELQAEGEYVIAKKKILRGTKIRGDDLIKVVGRLDTLPRGAYLNEKDLINRVNLRDIFPF 151

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
             I   +    +++     V + +   +  +   G +LS+ +    I V+ +  G +++G
Sbjct: 152 QPITSFMTRPYWLVKMNQLVTVKMKGVDFEVIFVGKSLSNGAERQKIRVQ-LKNGKVLTG 210

Query: 140 SVVDTGTVRVVV 151
            + +   V V +
Sbjct: 211 VINNNSEVIVFL 222


>gi|291288378|ref|YP_003505194.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290885538|gb|ADD69238.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 285

 Score = 73.0 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV-L 87
            V S  I  GE ++  R+++ +   S + G          G++  + L     + L   +
Sbjct: 166 YVTSSSIRKGEDVS-GRVQKERYELSRVHGEPVKDPS---GMIATKNLSSGRPLTLGDVM 221

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
            +P     G  V ++   G + ++T+G    DA IG  + VKN  +G +V G       V
Sbjct: 222 MKPDAFE-GTTVLLVYRSGALNVTTSGELQEDAYIGKNVRVKNTASGKIVRGRYEQGRKV 280

Query: 148 RV 149
            V
Sbjct: 281 VV 282


>gi|327398887|ref|YP_004339756.1| flagella basal body P-ring formation protein FlgA [Hippea maritima
           DSM 10411]
 gi|327181516|gb|AEA33697.1| flagella basal body P-ring formation protein FlgA [Hippea maritima
           DSM 10411]
          Length = 295

 Score = 72.6 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 2/120 (1%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V +  I +G ++    +     T+  +   Y  +   ++  V    +       LS   R
Sbjct: 177 VAAKDIESGSIITPDDITFK--TSDRVLSTYLTNKPSIINRVAISFIKKGSPFTLSNTKR 234

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              +  G  V++++  GN+ I T   AL      ++I +  + +  +    ++    V V
Sbjct: 235 FRPVKVGDIVKVMVISGNIVIRTTAKALRGGYKDEIIPIMYLSSKRVFPAKIIGKKEVLV 294


>gi|170768237|ref|ZP_02902690.1| flagella basal body P-ring formation protein FlgA [Escherichia
           albertii TW07627]
 gi|170123003|gb|EDS91934.1| flagella basal body P-ring formation protein FlgA [Escherichia
           albertii TW07627]
          Length = 219

 Score = 72.6 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       +  +   V+ R L PD
Sbjct: 89  VNVQATGNYVVAAMPIMRGGKLEADSVKLKRGRLDTLPPRTVLDVNQLADAVSLRDLSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L +L + + +  G +V +I +    + +  G AL++A +     V+
Sbjct: 149 QPIQLPLLRQVWRVKAGQRVNVIASGDGFSANAEGQALNNAGVAQNARVR 198


>gi|57505378|ref|ZP_00371306.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis
           RM3195]
 gi|57016203|gb|EAL52989.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis
           RM3195]
          Length = 220

 Score = 72.2 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 2/116 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  I  G+ +     K + +    +  N   S +D+  L+ +  +  + ++  ++     
Sbjct: 104 TRAIKRGDKIGAFDYKIVMMDFDKVPNNAL-SKEDLNNLLAKNNISKNTILRQNMFKTTA 162

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
           +I R  ++  +L    + +    ++L  A++G+ I VK+ D G ++ G VV    V
Sbjct: 163 IIKRNDQIIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGIVVGKNRV 217


>gi|329888227|ref|ZP_08266825.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           diminuta ATCC 11568]
 gi|328846783|gb|EGF96345.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           diminuta ATCC 11568]
          Length = 121

 Score = 72.2 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 37/99 (37%)

Query: 48  EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107
              V +           + V+GL  +R L     +    L  P VI+R   V +      
Sbjct: 3   WASVQSHLAPAGGPQDAEAVIGLQAKRALRAGSPVGPRDLASPQVIARNDMVEVAYINDG 62

Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           + ++  G A  +AS G+ + + N+ +   +    V  G 
Sbjct: 63  VELTVTGKATRNASAGEAVPILNVQSNRTIDAVAVAPGR 101


>gi|218460754|ref|ZP_03500845.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
          etli Kim 5]
          Length = 95

 Score = 72.2 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 46/63 (73%)

Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
          + +G+AVVP+ +I  G+ L+ S+L+E++VTN N+ G++A SI  V GLV++R LLP   I
Sbjct: 31 AGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTI 90

Query: 83 PLS 85
           +S
Sbjct: 91 AVS 93


>gi|255322186|ref|ZP_05363332.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter showae RM3277]
 gi|255300559|gb|EET79830.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter showae RM3277]
          Length = 268

 Score = 71.8 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           S++     S    V+      +  +   ++L      +  V       +      +   L
Sbjct: 135 SVFFRYEVSAKMPVLR----ATKPLTTRQMLGIDDFAKDWVELDEFSPDMMSEAPNAR-L 189

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
            T++ +    V+ L       +I +G +V  +L+ G ++I     AL + ++G+ I VKN
Sbjct: 190 ATKQNIKSGEVLRLRQFTPLPLIKKGERVNAVLSDGALSIIVEVTALENGNLGETIKVKN 249

Query: 131 IDTGVMVSGSVVDTGTVRV 149
            D   + S  +V    V +
Sbjct: 250 ND-KKVFSAQIVSKKQVMI 267


>gi|157415040|ref|YP_001482296.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386004|gb|ABV52319.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315931184|gb|EFV10156.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 220

 Score = 71.4 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  LV +  +  + 
Sbjct: 93  FIQANLEVLKSERTIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|90415322|ref|ZP_01223256.1| flagellar protein [marine gamma proteobacterium HTCC2207]
 gi|90332645|gb|EAS47815.1| flagellar protein [marine gamma proteobacterium HTCC2207]
          Length = 400

 Score = 71.4 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 1/121 (0%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            +V    I  G+ +  + +        N+  +          +   R L    ++ LS L
Sbjct: 274 VLVTQFGIARGQAVTRANIAMQDYY-GNLPQDSLQDYSSAERMQAIRNLPAGSLLRLSDL 332

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
               +I +G  V+++L  G + I+ A  AL DA +   + + N D+G  +       G  
Sbjct: 333 TPVNIIRKGDNVQLVLRVGALEITVAMQALEDARMDQRVLLLNPDSGEEIQAIAAGVGRA 392

Query: 148 R 148
           R
Sbjct: 393 R 393



 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR-- 89
           +  + AG  ++ + +K + + +SN+ G+   S+  + G    R L  D ++    +    
Sbjct: 213 TRSVVAGGTISGNDIKVVMLPSSNVPGSQILSLDQINGARAARNLTVDKILSSYDIKEKH 272

Query: 90  PYVIS-----RGAKVR 100
             +++     RG  V 
Sbjct: 273 QVLVTQFGIARGQAVT 288


>gi|82777314|ref|YP_403663.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
           dysenteriae Sd197]
 gi|81241462|gb|ABB62172.1| assembly of basal-body periplasmic P ring [Shigella dysenteriae
           Sd197]
          Length = 219

 Score = 71.4 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ VV ++ I  G  L    +K  +     +       I  +V  V+ R   PD
Sbjct: 89  VNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPSPD 148

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
             I L+   + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 149 QSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198


>gi|307747679|gb|ADN90949.1| Flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni M1]
          Length = 220

 Score = 71.4 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 2/127 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  LV +  +  + 
Sbjct: 93  FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGTV 147
           VV    +
Sbjct: 211 VVGKNRI 217


>gi|220932493|ref|YP_002509401.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
           orenii H 168]
 gi|219993803|gb|ACL70406.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
           orenii H 168]
          Length = 336

 Score = 71.4 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD--VVGLVTRRVLLPDHVIPL 84
             +V +  I  G  + +  L       + +RG   +   D  +   + +  L    ++  
Sbjct: 210 KVLVATRNIKRGSNICKEDLALTTEKITGVRGEIINDFNDPRLSYSIVKIPLQKGEILTT 269

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             L +P VI  G  V   +   N+ +ST+  AL    +GD + V N +TG      V+++
Sbjct: 270 DHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETGYEFKARVINS 329

Query: 145 GTVRVV 150
             VRVV
Sbjct: 330 RLVRVV 335


>gi|188997556|ref|YP_001931807.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932623|gb|ACD67253.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 170

 Score = 71.4 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 31/61 (50%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           + + +  KV I+    N+ I   G+AL +   GD I VKNI TG  + G V+   TV + 
Sbjct: 107 WAVVKNQKVSIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTVLIE 166

Query: 151 V 151
            
Sbjct: 167 A 167


>gi|154173812|ref|YP_001408259.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter curvus 525.92]
 gi|112802783|gb|EAU00127.1| putative flagella basal body P-ring formation protein FlgA
           [Campylobacter curvus 525.92]
          Length = 268

 Score = 71.0 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 2/121 (1%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
              +    I    +L+ +  +   +     + +   S+     LV R  +    V+    
Sbjct: 147 PVFIAINKIEHNHILSLTDYQSNYIEFEKYQKDMFSSMPSSR-LVARTAIKAGEVLSQRQ 205

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
                ++ RG  +  +L  G +++     AL D ++GD+I ++  D   ++  SV     
Sbjct: 206 FSAMSLVKRGDILNAVLNDGGLSVIVEVRALEDGNLGDIIKIRTKD-NKILPASVSGKNQ 264

Query: 147 V 147
           V
Sbjct: 265 V 265


>gi|332296515|ref|YP_004438438.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfobium narugense DSM 14796]
 gi|332179618|gb|AEE15307.1| flagella basal body P-ring formation protein FlgA
           [Thermodesulfobium narugense DSM 14796]
          Length = 225

 Score = 71.0 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 27  HAVVPSVVINAGEVLNESR-LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           +  V  V + AG V+N +  + + +   S +  ++A    ++ G      +    VI L 
Sbjct: 101 NVYVAKVPLKAGSVINVNDNVVKDERELSTLPKDFAID-DNINGSTLNANIAMGQVIRLG 159

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
           ++ +   I  G +V ++   GN T S   +ALS  SIGD I V+ I    +  G ++ + 
Sbjct: 160 LISKRIDIRLGQRVIVVGKVGNATFSLPAVALSSGSIGDDIKVRCITNNKVFIGKIISSS 219

Query: 146 TVRV 149
            V+ 
Sbjct: 220 EVQT 223


>gi|283954337|ref|ZP_06371858.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794136|gb|EFC32884.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           414]
          Length = 220

 Score = 71.0 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  L+ +  +  + 
Sbjct: 93  FIQANLEVLKSERAIKRGDKLGTFDYKSVLIDFDKVPSNALT-LDDVNNLIAKSNINKNT 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ I    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDILIELVALQSANMGERIRAKNKE-GRVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|254438146|ref|ZP_05051640.1| SAF domain family [Octadecabacter antarcticus 307]
 gi|198253592|gb|EDY77906.1| SAF domain family [Octadecabacter antarcticus 307]
          Length = 224

 Score = 71.0 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 4   VRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
           V + +     V    +L           AV     +  G+ +    L+   +       +
Sbjct: 74  VTWSILVRAQVQGAIALIPEASQGYTTQAVFLRRPLRGGDRIQVEDLELRPI-APLSSSS 132

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
             ++++DVVG V  + L P   +    L R + +  G  V + + +G   I T G+AL  
Sbjct: 133 VYNALEDVVGRVLVQSLSPRVPVMPRHLERDWAVDLGDVVSLRVVRGGTEIETFGVALES 192

Query: 120 ASIGDVIAVKNIDTGVMV 137
             IGD I ++N  +G  +
Sbjct: 193 GQIGDKIRIENRSSGREL 210


>gi|32266858|ref|NP_860890.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           hepaticus ATCC 51449]
 gi|32262910|gb|AAP77956.1| hypothetical protein HH_1359 [Helicobacter hepaticus ATCC 51449]
          Length = 305

 Score = 70.7 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  IN  + L     +  ++T   +   Y  S +++     +  +  D  I    +    
Sbjct: 188 TQNINVNDTLTPQNTRAERITFERVGAEYI-STQEIYNSGAKSYIRVDTAITKDKIKPRI 246

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++ +G K+R+   +G +T     +A  +A   ++I  +N ++G ++   + D G   ++
Sbjct: 247 IVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL 305


>gi|182412220|ref|YP_001817286.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Opitutus terrae PB90-1]
 gi|177839434|gb|ACB73686.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Opitutus terrae PB90-1]
          Length = 233

 Score = 70.7 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 8/143 (5%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSV-VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           S+ V     +  + +   V  +   +      + + L   +V     R     +    VG
Sbjct: 93  SIAVADATLVLRAALWRDVWAARQPLAKDSTFDPAVLDTRRVDLLREREALPVN----VG 148

Query: 70  LVT---RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
             +    R +    ++    + R  ++ +G  V +   +G + I+   +A+ + S G+ +
Sbjct: 149 DRSYSFARTIGSGRLLTWHDIARRPLVRKGDLVEVSAVEGQLLITMQAMAMENGSQGETV 208

Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
            V+N  +    + +VVD   V+V
Sbjct: 209 TVRNPVSRRDFAATVVDENRVQV 231


>gi|223040989|ref|ZP_03611249.1| putative flagella basal body P-ring formation protein FlgA
           [Campylobacter rectus RM3267]
 gi|222877745|gb|EEF12866.1| putative flagella basal body P-ring formation protein FlgA
           [Campylobacter rectus RM3267]
          Length = 273

 Score = 70.3 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  +   ++L      +  V       +      +   L  ++ +    V+ L      
Sbjct: 156 ATRPLATRQMLGVGDFVKDWVELGEFSPDMMSEAPNAR-LAAKQNIKSGEVLRLRQFTSL 214

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            +I +G +V  +L+ G ++I     AL + ++GD I VKN D   + S  +V    V +
Sbjct: 215 PLIKKGERVGAVLSDGALSIIVEVTALENGNLGDTIKVKNND-KKVFSAQIVSKKQVMI 272


>gi|154249530|ref|YP_001410355.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153466|gb|ABS60698.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 319

 Score = 70.3 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           I    V    I   E++  + ++ ++    ++           V  +  +V     +I  
Sbjct: 193 IRKIAVSKRRIEKEEIIGLNDVEFVEYNIYSLNKMPVFEEDLPV--MADKVFQKGEIIDG 250

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
             +    +I +G  V+ I   G + +ST   AL + ++G VI+VKN++ GV++ G++ + 
Sbjct: 251 KYISDVPLIVKGQVVKAISIVGGVMVSTLVQALENGNVGKVISVKNLENGVIIKGTIQED 310

Query: 145 GTVRVV 150
           GT+ V+
Sbjct: 311 GTIIVL 316


>gi|121613741|ref|YP_001000458.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005399|ref|ZP_02271157.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249319|gb|EAQ72279.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 220

 Score = 70.3 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  LV +  +  + 
Sbjct: 93  FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|283957249|ref|ZP_06374710.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791261|gb|EFC30069.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 220

 Score = 70.3 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  LV +  +  + 
Sbjct: 93  FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|57237614|ref|YP_178862.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni RM1221]
 gi|86150237|ref|ZP_01068464.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86152102|ref|ZP_01070314.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153344|ref|ZP_01071548.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597594|ref|ZP_01100828.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148926937|ref|ZP_01810614.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356737|ref|ZP_03223497.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218562397|ref|YP_002344176.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|315124292|ref|YP_004066296.1| flagellar basal body P-ring biosynthesis protein [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|57166418|gb|AAW35197.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni RM1221]
 gi|85839353|gb|EAQ56615.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840887|gb|EAQ58137.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843070|gb|EAQ60281.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88190186|gb|EAQ94161.1| flagellar basal-body P-ring formation protein FlgA, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360103|emb|CAL34897.1| putative flagellar protein FlgA [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845021|gb|EDK22118.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345376|gb|EDZ32019.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|284926015|gb|ADC28367.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315018014|gb|ADT66107.1| flagellar basal body P-ring biosynthesis protein [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315058223|gb|ADT72552.1| Flagellar basal-body P-ring formation protein flgA [Campylobacter
           jejuni subsp. jejuni S3]
 gi|315928304|gb|EFV07620.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315929194|gb|EFV08416.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 220

 Score = 70.3 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  LV +  +  + 
Sbjct: 93  FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|224437628|ref|ZP_03658581.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           cinaedi CCUG 18818]
          Length = 319

 Score = 70.3 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 3/130 (2%)

Query: 23  SVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
            +     V      I + E L+   ++E  +    +   +  SI+++     +  +    
Sbjct: 191 EIQARLRVAKSTQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQM 249

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
            I    L    ++ +G  V +   Q  ++I T  +A    +  ++I  +N D+G ++   
Sbjct: 250 PITKDKLKPRILVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIR 309

Query: 141 VVDTGTVRVV 150
           +V      ++
Sbjct: 310 IVSENKGEIL 319


>gi|225849136|ref|YP_002729300.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643496|gb|ACN98546.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 167

 Score = 69.9 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 31/58 (53%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           VI +  KV I+   G + I   G+AL     GD I VKNI TG  + G VVD  TV V
Sbjct: 107 VIQKNQKVNILYINGPIKIQLLGVALESGKEGDYIKVKNISTGKEIVGKVVDNQTVLV 164


>gi|313144080|ref|ZP_07806273.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           cinaedi CCUG 18818]
 gi|313129111|gb|EFR46728.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           cinaedi CCUG 18818]
          Length = 307

 Score = 69.9 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 49/119 (41%), Gaps = 1/119 (0%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  I + E L+   ++E  +    +   +  SI+++     +  +     I    L    
Sbjct: 190 TQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQMPITKDKLKPRI 248

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           ++ +G  V +   Q  ++I T  +A    +  ++I  +N D+G ++   +V      ++
Sbjct: 249 LVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIRIVSENKGEIL 307


>gi|118474723|ref|YP_892063.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118413949|gb|ABK82369.1| flagella basal body P-ring formation protein FlgA, putative
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 258

 Score = 69.9 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 1/123 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + +V    I+   +LN S  ++  V+               + L+TR  +    ++    
Sbjct: 136 NVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKILTNRQ 195

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
                 I +G  +  +L  G + I     AL D ++GD+I V+N +   +   +V+    
Sbjct: 196 FKTLSDIKKGDLINAVLKDGALNIEVLVTALEDGNVGDIIQVRN-ENNQVFKANVISKNR 254

Query: 147 VRV 149
           V +
Sbjct: 255 VLI 257


>gi|46203670|ref|ZP_00209070.1| COG1261: Flagellar basal body P-ring biosynthesis protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 99

 Score = 69.9 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%)

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           L    V+    +  P +++RG  V I+     +++S  GIA  +  +G  ++V N  +  
Sbjct: 10  LSAGSVLRSGDVAPPDLVARGESVNIVFETPGVSLSMRGIANENGRLGASVSVTNSASKK 69

Query: 136 MVSGSVVDTGTVRV 149
           ++   VV  G V V
Sbjct: 70  VLQAVVVGPGRVSV 83


>gi|325111112|ref|YP_004272180.1| flagella basal body P-ring formation protein FlgA [Planctomyces
           brasiliensis DSM 5305]
 gi|324971380|gb|ADY62158.1| flagella basal body P-ring formation protein FlgA [Planctomyces
           brasiliensis DSM 5305]
          Length = 447

 Score = 69.9 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 51/125 (40%), Gaps = 3/125 (2%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +     +  G+V+    L+ ++   +          ++V+G  T R +  D  +  S 
Sbjct: 209 RVLALKRALPRGKVIRADDLQWVEAEQT---AGLFLDPQEVIGTETIRSVRADQPLQQSD 265

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           + +  ++ R   V +    G++++     +L +AS+G  + +  +D    ++  V     
Sbjct: 266 VRQLPLVRRNEIVSVSANIGSISVRRYCRSLGEASLGQFVTLVPVDGKDKITARVTGLRE 325

Query: 147 VRVVV 151
             V++
Sbjct: 326 AEVLI 330


>gi|109948204|ref|YP_665432.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           acinonychis str. Sheeba]
 gi|109715425|emb|CAK00433.1| putative flagella basal body P-ring formation protein FlgA
           [Helicobacter acinonychis str. Sheeba]
          Length = 218

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 56/134 (41%), Gaps = 4/134 (2%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  K+ ++    +      S  D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKV--SAKVFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
             D ++         ++ +   +  +  +G ++I  +  AL + S+  +I  KN+++  +
Sbjct: 145 AADTLLNTDKTQDLIIVRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESNKI 204

Query: 137 VSGSVVDTGTVRVV 150
           +   V+ +  V+++
Sbjct: 205 LKAKVLSSSKVQIL 218


>gi|15612435|ref|NP_224088.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori J99]
 gi|4155997|gb|AAD06959.1| putative [Helicobacter pylori J99]
          Length = 218

 Score = 69.1 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  K+ +V    +         D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSASTIKKDENITANNTKKERVLFGALSNPLLEGAIDKV--SAKHFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            PD ++         ++ +   +  +  +G ++I  +  AL + ++  +I  KN+++  +
Sbjct: 145 PPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKI 204

Query: 137 VSGSVVDTGTVRVV 150
           +   V+ +   +++
Sbjct: 205 LKAKVLSSSKAQIL 218


>gi|144227|gb|AAA23036.1| basal body ring component protein (pot.); putative [Caulobacter
           vibrioides]
          Length = 267

 Score = 69.1 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 22  ASVIGHAVVP-SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           A      V+P +  ++AGE++    L  +++  +    +       V+GL  +R L    
Sbjct: 122 APRANVEVLPYARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAKRPLREGA 179

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
            + +  +    VI  G  + I    G +++S  G A++ A+ GDV AV+N  +  ++ 
Sbjct: 180 PVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQ 237


>gi|16126304|ref|NP_420868.1| distal basal-body ring component protein FlaD [Caulobacter
           crescentus CB15]
 gi|221235081|ref|YP_002517517.1| flagella basal body P ring formation protein FlgA [Caulobacter
           crescentus NA1000]
 gi|13637765|sp|P12634|FLAD_CAUCR RecName: Full=Distal basal body ring component protein; Flags:
           Precursor
 gi|13423544|gb|AAK24036.1| distal basal-body ring component protein FlaD [Caulobacter
           crescentus CB15]
 gi|220964253|gb|ACL95609.1| flagella basal body P ring formation protein flgA [Caulobacter
           crescentus NA1000]
          Length = 267

 Score = 69.1 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  ++AGE++    L  +++  +    +       V+GL  +R L     + +  +    
Sbjct: 133 ARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAKRPLREGAPVGMKDVAAAQ 190

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
           VI  G  + I    G +++S  G A++ A+ GDV AV+N  +  ++ 
Sbjct: 191 VIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQ 237


>gi|83646787|ref|YP_435222.1| flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
 gi|83634830|gb|ABC30797.1| Flagellar basal body P-ring biosynthesis protein [Hahella
           chejuensis KCTC 2396]
          Length = 328

 Score = 68.7 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +G    PS     G  ++   LK   +  +   G    S +++ G    R +     I
Sbjct: 201 SAMGEVWTPSTDAEKGTAVDVHPLKREFIDVA-AAGIEPASRREIEGKEFSRRVESGQPI 259

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
              VL     I  G  V + +  G + + +   A+ DA IGD I +K++ +G  + G V+
Sbjct: 260 TKDVLRAIPEIKNGDIVFVEVRVGTVFLRSRAEAMHDAYIGDRIKLKSVSSGETMLGVVL 319

Query: 143 DTGTV 147
             G V
Sbjct: 320 SAGRV 324


>gi|208435345|ref|YP_002267011.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27]
 gi|208433274|gb|ACI28145.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27]
          Length = 218

 Score = 68.3 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ ++    +         D V    +  + P+ ++         ++ 
Sbjct: 105 IKKDENITANNTQKERIPFGTLSNPLLEGAIDKV--SAKHFIPPNTLLSTDKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|298735553|ref|YP_003728074.1| flagella basal body P-ring formation protein FlgA [Helicobacter
           pylori B8]
 gi|298354738|emb|CBI65610.1| flagella basal body P-ring formation protein FlgA [Helicobacter
           pylori B8]
          Length = 218

 Score = 68.3 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 49/116 (42%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  K+ +V    +         D V    +  + PD ++         ++ 
Sbjct: 105 IKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKNFIPPDTLLSADKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +  V+++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 218


>gi|207091891|ref|ZP_03239678.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 218

 Score = 68.0 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  ++ ++    +         D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKNFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            P+ ++         ++ +   +  +  +G ++I  +  AL + ++  +I  KN+++  +
Sbjct: 145 PPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKI 204

Query: 137 VSGSVVDTGTVRVV 150
           +   V+ +   +++
Sbjct: 205 LKAKVLSSSKAQIL 218


>gi|153952192|ref|YP_001398303.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939638|gb|ABS44379.1| putative flagellar basal-body P-ring formation protein FlgA
           [Campylobacter jejuni subsp. doylei 269.97]
          Length = 220

 Score = 68.0 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N    + DV  L+ +  +  + 
Sbjct: 93  FIQANLEVLKSKRAIRRGDKLGAFDYKSILIDFDKVPLNALT-LDDVDNLIAKSNINKNA 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  IL++ N+ +    +AL  A++G+ I  KN + G ++ G 
Sbjct: 152 ILRANMFKTTALIRRNDPIIGILSEANVDVLIELVALQSANMGERIHAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           VV    
Sbjct: 211 VVGKNR 216


>gi|217031821|ref|ZP_03437324.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128]
 gi|216946473|gb|EEC25075.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128]
          Length = 206

 Score = 68.0 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 49/116 (42%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  K+ +V    +         D V    +  + PD ++         ++ 
Sbjct: 93  IKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKNFIPPDTLLSADKTQALIIVR 150

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +  V+++
Sbjct: 151 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 206


>gi|237755438|ref|ZP_04584063.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692402|gb|EEP61385.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 170

 Score = 68.0 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           Y I +  KV I+    N+ I   G+AL +   GD I VKNI TG  + G V+   TV + 
Sbjct: 107 YKIVKNQKVGIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTVLIE 166

Query: 151 V 151
            
Sbjct: 167 A 167


>gi|317010149|gb|ADU80729.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori India7]
          Length = 218

 Score = 68.0 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R     +L +    S+  S+     V    I   E +  +  ++ +V    +       
Sbjct: 76  LRLENEPNLRLPVRYSVIGSMQAFKSV--STIKKDENITANNTQKERVLFGALSNPLLEG 133

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
             D V    +  + P+ ++         ++ +   +  +  +G ++I  +  AL + +  
Sbjct: 134 AIDRV--SAKHFIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGAFN 191

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +I  KN+++  ++   V+ +   +++
Sbjct: 192 QIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|317182682|dbj|BAJ60466.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori F57]
          Length = 218

 Score = 67.6 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  K+ +V    +        +  +G V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTKKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|332674247|gb|AEE71064.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori 83]
          Length = 218

 Score = 67.6 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +G V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|317179654|dbj|BAJ57442.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori F30]
          Length = 218

 Score = 67.2 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +G V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|313672413|ref|YP_004050524.1| flagella basal body p-ring formation protein flga [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939169|gb|ADR18361.1| flagella basal body P-ring formation protein FlgA [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 281

 Score = 67.2 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
            +        +    I  GE +   ++KE+QV  +N++ +   +  D +     + +  +
Sbjct: 156 AYIKAFSRGYISDSKIEKGESV-LGKIKEVQVEVTNLKDDLFLNNFDAI---AIQPIPKN 211

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            VI L ++ +     +G KV++I   G + +    + + DA  G  ++VKN+ +  +++G
Sbjct: 212 RVITLKMVRQMPEKMKGEKVKVIYNNGTIVLEFEAVLMDDAYKGGRVSVKNLSSDKVLTG 271

Query: 140 S 140
            
Sbjct: 272 I 272


>gi|217033891|ref|ZP_03439315.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10]
 gi|216943654|gb|EEC23099.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10]
          Length = 211

 Score = 66.8 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 49/116 (42%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ +V    +         D V    +  + P+ ++         ++ 
Sbjct: 98  IKKDENITANNTQKERVLFGVLSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 155

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +  V+++
Sbjct: 156 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 211


>gi|57167765|ref|ZP_00366905.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228]
 gi|57020887|gb|EAL57551.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228]
          Length = 220

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 2/126 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           F       +     I  G+ L     K + +    +  N   +++D   L+ +  +  + 
Sbjct: 93  FMQASLEVLKSERSIQRGDKLGAFDYKSVLMDFDKVPSNAL-ALEDTHNLIAKSNISKNT 151

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
           ++  ++     +I R   +  +L+ GN+ +     AL  A +G+ I  KN + G ++ G 
Sbjct: 152 ILKENMFKTMALIRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGI 210

Query: 141 VVDTGT 146
           V     
Sbjct: 211 VTGKNR 216


>gi|317011612|gb|ADU85359.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori SouthAfrica7]
          Length = 218

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R     +L +    S+ AS+     + +  I   E +     K+ ++    +       
Sbjct: 76  LRLENEPNLRLPVRYSVIASMQAFKSISA--IKKDENITAHNTKKERIAFGALSNPLLEG 133

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
             D V    +  + PD ++         ++ +   +  +  +G ++I  +  AL + S+ 
Sbjct: 134 AIDKV--SAKNFIPPDTLLNADKTQDLIIVRKNDIITGVYEEGQISIEISLKALENGSLN 191

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +I  KN ++  ++   V+ +  V+++
Sbjct: 192 QIIQAKNAESNKILKAKVLSSSKVQIL 218


>gi|261840153|gb|ACX99918.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori 52]
          Length = 218

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  K+ ++    +        +  +G V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTKKERILFGVLSNPLL---EGAIGKVSAKNFIPPNTLLSTDKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|317014892|gb|ADU82328.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Gambia94/24]
          Length = 218

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 56/134 (41%), Gaps = 4/134 (2%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  K+ +V    +         D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSASAIKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKHFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            PD ++ +       ++ +   +  +  +G ++I  +  AL + ++  +I  KN+++  +
Sbjct: 145 PPDTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKI 204

Query: 137 VSGSVVDTGTVRVV 150
           +   V+ +   +++
Sbjct: 205 LKAKVLSSSKAQIL 218


>gi|254779987|ref|YP_003058094.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori B38]
 gi|254001900|emb|CAX30153.1| Putative flagellar protein FlgA; putative signal peptide
           [Helicobacter pylori B38]
          Length = 218

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ +V    +         D V    +  + P+ ++         ++ 
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDRV--SAKHFIPPNTLLSADKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|150020565|ref|YP_001305919.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Thermosipho melanesiensis BI429]
 gi|149793086|gb|ABR30534.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Thermosipho melanesiensis BI429]
          Length = 310

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            +L A  I    V +  IN GE +    +    V   ++ G      +  + +V ++   
Sbjct: 176 VNLIAEYIRKIPVAARNINYGEQIKRDDVVFSDVNVLSLHGTPVDVSR--LPMVAKKYFK 233

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
               I    L +   +  G  +   +    + +     A+   ++GDVI  +N+D+G +V
Sbjct: 234 VGEPIFEEFLEKVPDVVVGQLIFGYVELPGVKVHALLRAMESGNVGDVIKARNVDSGKIV 293

Query: 138 SGSVVDTGTVRVV 150
            G +V+   ++VV
Sbjct: 294 YGVIVEGPMLKVV 306


>gi|308185247|ref|YP_003929380.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori SJM180]
 gi|308061167|gb|ADO03063.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori SJM180]
          Length = 218

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  K+ +V    +         D V    +  + PD ++         ++ 
Sbjct: 105 IKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKHFIPPDTLLSTDKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|108563861|ref|YP_628177.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori HPAG1]
 gi|107837634|gb|ABF85503.1| hypothetical protein HPAG1_1436 [Helicobacter pylori HPAG1]
          Length = 218

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 50/116 (43%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ ++    +      S  D V    +  + PD ++ +       ++ 
Sbjct: 105 IKKDENITANNTQKERIPFGVLSNPLLESAIDKV--SAKNFIPPDTLLSMDKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|210135644|ref|YP_002302083.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori P12]
 gi|210133612|gb|ACJ08603.1| flagella basal body P-ring formation protein FlgA [Helicobacter
           pylori P12]
          Length = 218

 Score = 66.4 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ +V    +         D V    +  + PD ++         ++ 
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKHFIPPDTLLSADKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|307638132|gb|ADN80582.1| Flagellar basal-body P ring formation protein [Helicobacter pylori
           908]
 gi|325996732|gb|ADZ52137.1| Flagellar basal-body P-ring formation protein [Helicobacter pylori
           2018]
 gi|325998326|gb|ADZ50534.1| putative P-ring biosynthesis protein [Helicobacter pylori 2017]
          Length = 218

 Score = 66.0 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 56/134 (41%), Gaps = 4/134 (2%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  K+ +V+   +         D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSASAIKKDENITANNTKKERVSFGALSNPLLEGAIDKV--SAKNFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
            PD ++         ++ +   +  +  +G ++I  +  AL + ++  +I  KN+++  +
Sbjct: 145 PPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKI 204

Query: 137 VSGSVVDTGTVRVV 150
           +   V+ +   +++
Sbjct: 205 LKAKVLSSSKAQIL 218


>gi|254499119|ref|ZP_05111809.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12]
 gi|254351658|gb|EET10503.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12]
          Length = 288

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 2/127 (1%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
                 V    I    +L+   +   +   + ++          V L   R +  + ++ 
Sbjct: 163 AYQAVFVAQHKIKQHTLLHSEDIALQRRNIAGLKNPPLTQFPQRVWL--TRSINKNQILT 220

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              +     + +G KV + + Q  ++I    +A SDA +G  + ++N  T      +V  
Sbjct: 221 HDDVRTTPEVMQGHKVNVNVRQHGISIMMEALAQSDAYLGQAVRMQNPQTNKYFVATVTG 280

Query: 144 TGTVRVV 150
                +V
Sbjct: 281 KNQAEIV 287


>gi|308062741|gb|ADO04629.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Cuz20]
          Length = 218

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +  V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTQKERVLFGTLSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|15646086|ref|NP_208268.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori 26695]
 gi|2314666|gb|AAD08529.1| predicted coding region HP1477 [Helicobacter pylori 26695]
          Length = 218

 Score = 65.6 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 56/139 (40%), Gaps = 4/139 (2%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           L +    S+  S+     V +  I   E +  +  ++ ++    +         D V   
Sbjct: 84  LRLPVRYSVIGSMQAFKSVSA--IKKDENITANNTQKERILFGALSNPLLEGAIDKV--S 139

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            +  + P+ ++         ++ +   +  +  +G ++I  +  AL + ++  +I  KN+
Sbjct: 140 AKNFIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNL 199

Query: 132 DTGVMVSGSVVDTGTVRVV 150
           ++  ++   V+ +   +++
Sbjct: 200 ESNKILKAKVLSSSKAQIL 218


>gi|329901226|ref|ZP_08272751.1| Flagellar basal-body P-ring formation protein flgA
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327549158|gb|EGF33750.1| Flagellar basal-body P-ring formation protein flgA
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 245

 Score = 65.6 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 5/142 (3%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +       VI   V  +  +  G+++  + +  M+   + +           +G
Sbjct: 109 WTVYVTAQV----KVIAEYVASAAPLAQGQLVGPNDVIRMRGDLTVLPAGILTDPAQAIG 164

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
                 L     +    L    V+ +G  VR++ +    +++T G AL++A+ G +   +
Sbjct: 165 RTMAMSLGMGSPLRTDALRIQQVVQQGQAVRLVSSGPGFSVATEGRALNNAAEGQIAQAR 224

Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
               G +VSG     G V V  
Sbjct: 225 -TAAGQVVSGVARAGGYVDVTY 245


>gi|303248238|ref|ZP_07334501.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           fructosovorans JJ]
 gi|302490376|gb|EFL50287.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
           fructosovorans JJ]
          Length = 324

 Score = 65.6 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
             RR +    +I    +    +I RG +VR++     + ++    A++D + G  I VKN
Sbjct: 245 RARRGVGTGQIIMADDMEPMPLILRGEQVRVVYQGRGVRLTLLAEAMTDGAPGGKITVKN 304

Query: 131 IDTGVMVSGSVVDTGTVRV 149
                 + G V D  TV V
Sbjct: 305 PKGNKEIMGVVRDRSTVVV 323


>gi|317181160|dbj|BAJ58946.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori F32]
          Length = 218

 Score = 65.3 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  K+ +V    +        +  +  V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTKKERVLFGTLSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|261838751|gb|ACX98517.1| hypothetical protein KHP_1328 [Helicobacter pylori 51]
          Length = 218

 Score = 64.9 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ +V    +         D V    +  + P+ ++         ++ 
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|289807482|ref|ZP_06538111.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 84

 Score = 64.9 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
           V+ R L P   + L+++ + + +  G +V++I      +++  G A+++A++     V+ 
Sbjct: 5   VSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR- 63

Query: 131 IDTGVMVSGSVVDTGTVRV 149
           + +G +VSG+V   G + +
Sbjct: 64  MTSGQIVSGTVDSDGNILI 82


>gi|317178182|dbj|BAJ55971.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori F16]
          Length = 218

 Score = 64.9 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +  V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|56551515|ref|YP_162354.1| hypothetical protein ZMO0619 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761159|ref|ZP_04759248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|4378864|gb|AAD19732.1| flagellar protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543089|gb|AAV89243.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374778|gb|EER64239.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 188

 Score = 64.9 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  V ++    + T+S  GIA  D ++GD I VK+  +   V   VV++G VR+
Sbjct: 127 LVKRGDPVELVAGNNSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184


>gi|188528248|ref|YP_001910935.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Shi470]
 gi|188144488|gb|ACD48905.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Shi470]
 gi|308064237|gb|ADO06124.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Sat464]
          Length = 218

 Score = 64.9 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +  V  +  + P+ ++         ++
Sbjct: 105 IKKDENITATNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|317013247|gb|ADU83855.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori Lithuania75]
          Length = 218

 Score = 64.5 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 57/139 (41%), Gaps = 4/139 (2%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           L +    S+  S+     V +  I   E +  +  K+ +V    +         D V   
Sbjct: 84  LRLPVRYSVIGSMQAFKSVSA--IKKDENITANNTKKERVLFGVLSNPLLEGAIDKV--S 139

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            +  + P+ ++ +       ++ +   +  +  +G ++I  +  AL + ++  +I  KN+
Sbjct: 140 AKNFIPPNTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNL 199

Query: 132 DTGVMVSGSVVDTGTVRVV 150
           ++  ++   V+ +   +++
Sbjct: 200 ESNKILKAKVLSSSKAQIL 218


>gi|309388847|gb|ADO76727.1| flagella basal body P-ring formation protein FlgA [Halanaerobium
           praevalens DSM 2228]
          Length = 323

 Score = 64.5 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 2/127 (1%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV--GLVTRRVLLPDHVIPL 84
             +  +  +     L +S  +  +   S           ++    +   R L    V+  
Sbjct: 196 KVLTANKKLARNSKLKKSDFEREEKIVSGNLEKIVRDYAEIDFNKVQLTRDLNQGEVLNK 255

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           S L  PYV+  G K+ + +   N+ IST   A     IGD+I V+N+ TG      V+  
Sbjct: 256 SYLKIPYVVKWGQKLNLRVKVNNIKISTLVKAKERGKIGDIIKVENLRTGYDFQVLVISP 315

Query: 145 GTVRVVV 151
             V+++ 
Sbjct: 316 TEVKLIS 322


>gi|260752880|ref|YP_003225773.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552243|gb|ACV75189.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 188

 Score = 64.5 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           ++ RG  V ++    + T+S  GIA  D ++GD I VK+  +   V   VV++G VR+
Sbjct: 127 LVKRGDPVELVAGNSSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184


>gi|330809231|ref|YP_004353693.1| flagella basal body P-ring formation protein flgA [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377339|gb|AEA68689.1| putative flagella basal body P-ring formation protein flgA
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 232

 Score = 64.5 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 43/114 (37%)

Query: 36  NAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
            A + L +++ +  +V  +  + +      D+ G    + +     +    L    ++ R
Sbjct: 117 RADQALADAQPRLERVDLAAAQLSPGDLPNDLAGQWLTQSVNAGMPVLKRHLKAEPLVYR 176

Query: 96  GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            A V +++    + + T G AL    +G+ + V        +   V   G V V
Sbjct: 177 DAPVTVVVYGPGLMLRTEGKALRPGVLGERVPVMLDGAESSLLAVVAGKGEVHV 230


>gi|308183580|ref|YP_003927707.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori PeCan4]
 gi|308065765|gb|ADO07657.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori PeCan4]
          Length = 218

 Score = 64.1 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I   E +  +  ++ +V    +         D V    +  + P+ ++         ++ 
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 162

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
           +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|157165005|ref|YP_001466855.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter concisus 13826]
 gi|112801327|gb|EAT98671.1| putative flagella basal body P-ring formation protein FlgA
           [Campylobacter concisus 13826]
          Length = 268

 Score = 64.1 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           LVT+  +    ++     +   ++ +G  +  +L++G + I     AL D ++GD+I ++
Sbjct: 189 LVTKVQIRSGEILTKRQFNAISLVKKGQILNAVLSEGGVKIIAEVKALEDGNLGDMIKIR 248

Query: 130 NIDTGVMVSGSVVDT 144
                 ++  +V   
Sbjct: 249 -TRENKILQATVSGK 262


>gi|309788128|ref|ZP_07682734.1| flagella basal body P-ring formation protein flgA [Shigella
           dysenteriae 1617]
 gi|308923980|gb|EFP69481.1| flagella basal body P-ring formation protein flgA [Shigella
           dysenteriae 1617]
          Length = 122

 Score = 64.1 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 43/101 (42%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V ++ I  G  L    +K  +     +       I  +V  V+ R   PD  I L+   
Sbjct: 1   MVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPSPDQSIQLTQFR 60

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           + + +  G +V +I +    + +  G AL++A++     V+
Sbjct: 61  QAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 101


>gi|297380668|gb|ADI35555.1| flagella basal body P-ring formation protein FlgA [Helicobacter
           pylori v225d]
          Length = 218

 Score = 63.7 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  ++ +V    +        +  +  V  +  + P+ ++         ++
Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSTDKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|213023590|ref|ZP_03338037.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 133

 Score = 63.7 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 45/105 (42%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  +  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 28  VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 87

Query: 80  HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
             + L+++ + + +  G +V++I      +++  G A+++A++  
Sbjct: 88  QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQ 132


>gi|224418872|ref|ZP_03656878.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           canadensis MIT 98-5491]
 gi|253827826|ref|ZP_04870711.1| flagellar basal body P-ring biosynthesis protein [Helicobacter
           canadensis MIT 98-5491]
 gi|313142389|ref|ZP_07804582.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           canadensis MIT 98-5491]
 gi|253511232|gb|EES89891.1| flagellar basal body P-ring biosynthesis protein [Helicobacter
           canadensis MIT 98-5491]
 gi|313131420|gb|EFR49037.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           canadensis MIT 98-5491]
          Length = 298

 Score = 63.7 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV- 81
                 +V    I+ G+ +    ++ +++    I      S +  +G V  R   P  V 
Sbjct: 172 DATLEGMVTIDEISGGQTITYQNIRVVEIPFDKIGSELMRSDE--IGKVAVRSYTPKEVL 229

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    L    V+ +G K+ + + +  + +     AL + +IGDVI  K ++        V
Sbjct: 230 VTHDRLVAKRVVKKGDKIVVSVQEEGVVLEFVLEALKNGAIGDVIRAKALEGKKTYQVKV 289

Query: 142 VDTGT 146
           +D G 
Sbjct: 290 IDEGR 294


>gi|78777321|ref|YP_393636.1| flagellar basal body P-ring biosynthesis protein FlgA [Sulfurimonas
           denitrificans DSM 1251]
 gi|78497861|gb|ABB44401.1| Flageller protein FlgA [Sulfurimonas denitrificans DSM 1251]
          Length = 289

 Score = 63.7 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 2/118 (1%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
              +     L+ S   +  V     R     +I     L  +R +  D ++ +  +    
Sbjct: 173 KDSLKKDTNLSPSNTFKKSVRLDRFRDKPLQNIYKT-SLQVKRHIQKDAILTIRDVEIAD 231

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+ R + + + + +  M I+ +  A  DA + D+I V+N  +G ++   V  + +  +
Sbjct: 232 VVKRDSNINVTMHRDGMDITFSAKAQKDAKVNDIINVQN-SSGKILKVKVTGSNSAEI 288


>gi|315585864|gb|ADU40245.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori 35A]
          Length = 218

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93
           I   E +  +  K+ ++    +        +  +  V  +  + P+ ++ +       ++
Sbjct: 105 IKKDENITANNTKKERILFGALSNPLL---EGAINKVSAKNFIPPNTLLSVDKTQALIIV 161

Query: 94  SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            +   +  +  +G ++I  +  AL + ++  +I  KN+++  ++   V+ +   +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218


>gi|268317782|ref|YP_003291501.1| flagella basal body P-ring formation protein FlgA [Rhodothermus
           marinus DSM 4252]
 gi|262335316|gb|ACY49113.1| flagella basal body P-ring formation protein FlgA [Rhodothermus
           marinus DSM 4252]
          Length = 237

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 5/133 (3%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN--YAHSIKDVV---GLVTRRV 75
           + +     +V    +   E ++ S L+ +    + +R        ++ +     L+  R 
Sbjct: 98  YVARYDSVIVARQALRRDEPVDPSALEVVWQETTRLRTPPLTPTRLRQLQRQGPLLAVRS 157

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +    V+    L  PY +  G  V +   +G + +     A +   +GD I +    T  
Sbjct: 158 VTAGQVLRADDLRPPYAVQTGETVWMRYRRGGILLRLRCQARAAGFVGDEIELYAPQTRA 217

Query: 136 MVSGSVVDTGTVR 148
              G +V  G V 
Sbjct: 218 TYRGRIVAPGLVE 230


>gi|217076994|ref|YP_002334710.1| flagella basal body P-ring formation protein FlgA [Thermosipho
           africanus TCF52B]
 gi|217036847|gb|ACJ75369.1| flagella basal body P-ring formation protein FlgA [Thermosipho
           africanus TCF52B]
          Length = 310

 Score = 62.2 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V +  IN GE +N   +    V   ++RG      K  + +++R+       +      R
Sbjct: 188 VAARNINYGEQVNMDDVAFADVNIFSLRGTPLDVSK--LPMISRKYFKVGEPLFEEYFER 245

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
              +  G  +   +    + + T   AL   ++GDVI  +NI++G +V G +V+   ++V
Sbjct: 246 VPDVVVGQVIVGYVELPGVIVKTMLRALESGNVGDVIKARNIESGKIVYGLIVEGPMLKV 305

Query: 150 V 150
           V
Sbjct: 306 V 306


>gi|261886408|ref|ZP_06010447.1| flagellar basal body P-ring biosynthesis protein FlgA
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 235

 Score = 61.8 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + +V    I+   +LN S  ++  V+               + L+TR  +    ++    
Sbjct: 132 NVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKILTNRQ 191

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
                 I +G  +  +L  G + I      L D ++GD+I V+N
Sbjct: 192 FKTLSDIKKGDLINAVLKDGALNIEVLVTELEDGNVGDIIQVRN 235


>gi|305432211|ref|ZP_07401375.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           coli JV20]
 gi|304444754|gb|EFM37403.1| flagella basal body P-ring formation protein FlgA [Campylobacter
           coli JV20]
          Length = 127

 Score = 61.8 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 2/114 (1%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
             I  G+ L     K + +    +  N   +++D   L+ +  +  + ++  ++     +
Sbjct: 12  RSIQRGDKLGAFDYKSVLMDFDKVPSNAL-ALEDTHNLIAKSNISKNTILKENMFKTMAL 70

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           I R   +  +L+ GN+ +     AL  A +G+ I  KN + G ++ G V     
Sbjct: 71  IRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGIVTGKNR 123


>gi|24215366|ref|NP_712847.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45657205|ref|YP_001291.1| flagella basal body P-ring formation protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24196477|gb|AAN49865.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45600443|gb|AAS69928.1| flagella basal body P-ring formation protein precursor [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 296

 Score = 61.8 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 4/124 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIP 83
           +   +     +N G  +     +E ++  S        S   +++G    + +    +  
Sbjct: 173 MVTVLKAKRSLNQGIKITNEDFQEEEIFTSE---EILDSPGNELLGSTLLKNMNEGEIFR 229

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
              + +   + RG ++ +I  +G++ + T   ALS  +IG+ + V        +   VVD
Sbjct: 230 KKHVRKIQDVQRGGEILMIYHKGSLVLKTKVKALSSGNIGEEVQVTTHSRENQMKAKVVD 289

Query: 144 TGTV 147
             TV
Sbjct: 290 KNTV 293


>gi|149193821|ref|ZP_01870919.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
           mediatlanticus TB-2]
 gi|149135774|gb|EDM24252.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
           mediatlanticus TB-2]
          Length = 157

 Score = 61.4 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           L+  +++  + +I      +  ++ RG  V + +   N+TI+T   AL D +IGD+I ++
Sbjct: 79  LIASKIISKNSIITTLNTKKAPLVLRGENVNVTIKSKNITITTTAKALKDGNIGDIINIE 138

Query: 130 NIDTGVMVSGSVVDTGTVR 148
                 +    VV+   V 
Sbjct: 139 --MNKRIYKAIVVNKNQVE 155


>gi|331005469|ref|ZP_08328848.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989]
 gi|330420745|gb|EGG95032.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989]
          Length = 317

 Score = 61.4 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V    I     LN        +  +   GN     K +      +V+     +  ++L 
Sbjct: 196 LVAKNRIETKTPLNIDLFTIDYIDVTTFSGNPVTEYKKLDSRRAVKVIEKGTALTYNMLE 255

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           +   +++G  + + + Q N+ IST  IAL   +I + I + N  T     G++V    V 
Sbjct: 256 KIPFVTKGQLINVYVRQHNVGISTKAIALKSGNINEKIPMLNPATKGKYMGTIVGEKQVV 315

Query: 149 V 149
           V
Sbjct: 316 V 316


>gi|239815250|ref|YP_002944160.1| flagella basal body P-ring formation protein FlgA [Variovorax
           paradoxus S110]
 gi|239801827|gb|ACS18894.1| flagella basal body P-ring formation protein FlgA [Variovorax
           paradoxus S110]
          Length = 351

 Score = 61.4 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 7/127 (5%)

Query: 30  VPSVVINAGEVLNESRLK----EMQVTNSNIRGNYAHSIK---DVVGLVTRRVLLPDHVI 82
           V +  + +G  ++   L+      +V  +NI      S     D      RR L    V+
Sbjct: 223 VATQSMRSGSQVDAVLLRGATESREVDLTNISHGTPVSSSAELDAGRQRLRRPLKSGEVL 282

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
             + L     + RG    +    G +++ +    L D   G ++ VK       V   V 
Sbjct: 283 THAHLEPVPAVVRGNWAHLQARSGAVSVESRVEVLQDGRTGQLVRVKVPGASGEVLARVT 342

Query: 143 DTGTVRV 149
             G V V
Sbjct: 343 GPGQVEV 349


>gi|254457883|ref|ZP_05071310.1| flageller protein FlgA [Campylobacterales bacterium GD 1]
 gi|207085276|gb|EDZ62561.1| flageller protein FlgA [Campylobacterales bacterium GD 1]
          Length = 289

 Score = 61.0 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 2/115 (1%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           IN    L+     +  +   N       +I     L  +  +  D VI    +    V+ 
Sbjct: 176 INRDTELSPLNTVKKSILLDNFMAKPIQNIDSNA-LQGKHNIKKDEVITTRDVEILSVVK 234

Query: 95  RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           R + + + L   NM+IS +  AL D  +GD I V+   +G  +   V       +
Sbjct: 235 RDSFIDVSLNSKNMSISFSAKALQDGKLGDTITVQ-KSSGKRLKVRVTGKNRAEM 288


>gi|239817169|ref|YP_002946079.1| flagella basal body P-ring formation protein FlgA [Variovorax
           paradoxus S110]
 gi|239803746|gb|ACS20813.1| flagella basal body P-ring formation protein FlgA [Variovorax
           paradoxus S110]
          Length = 237

 Score = 61.0 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 5/148 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C      ++ YVL+      +V G  +V +  I+ G+ L            + +  + 
Sbjct: 92  LRCHSEQKPWTRYVLA----HVAVEGRYLVAARNIDTGQALGAGDFIARNGDLTALPRSV 147

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
              + ++ G+V    +     +   ++    VI +G  ++++       +ST   A+S A
Sbjct: 148 VTDLAELQGVVAANRIASGAPLRRELMRGVAVIQQGQTIKVVAEGPGYVVSTEARAMSSA 207

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
           S G  +  + +D G MVSG   + G VR
Sbjct: 208 SAGAAVRARTVD-GRMVSGVADEEGQVR 234


>gi|206603524|gb|EDZ40004.1| Hypothetical protein CGL2_11111025 [Leptospirillum sp. Group II
           '5-way CG']
          Length = 212

 Score = 60.6 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 26/60 (43%)

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
           +  G  VRI        IS  GIA      GD I+V N  +G  V  +V     VR+ +K
Sbjct: 146 VRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQISVFNPMSGSRVQATVTGPDRVRIRLK 205


>gi|301168506|emb|CBW28096.1| hypothetical protein BMS_3353 [Bacteriovorax marinus SJ]
          Length = 297

 Score = 60.6 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 17  LDSLFASVIGHAVVPSVVINAG-EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           + +    +   A+VP  +I    + L++   +E +V   N   +   +I  +      + 
Sbjct: 164 MLNAKLQIKTRALVPKGIIKIDNQPLSKQMFREEEVYTDN-PSSLFTNINTLNFYKVNKS 222

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
           +  D  + ++ L    ++  G   ++IL  G +++ +    L  A  G+ + +++     
Sbjct: 223 ID-DRAVLINDLVPVSLVKAGIPTKVILDNGIISLKSVATPLRSARFGETVQLRSSKGNK 281

Query: 136 MVSGSVVDTGTVRVVV 151
           ++ G V+D   V V +
Sbjct: 282 IIVGKVIDYNKVSVEL 297


>gi|149173756|ref|ZP_01852385.1| Flageller protein FlgA [Planctomyces maris DSM 8797]
 gi|148847286|gb|EDL61620.1| Flageller protein FlgA [Planctomyces maris DSM 8797]
          Length = 383

 Score = 60.3 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 3/121 (2%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +     +N G V+    L  M+              + V+G    R +   HV+    L 
Sbjct: 218 LAAKYTLNKGTVVRADDLVWMRPEKDQTG---ITDPRLVIGRELTRTVYQSHVMRSQDLI 274

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              +I  GA V +   +G +++     A     +GD I +  ++    +  +V       
Sbjct: 275 EVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAE 334

Query: 149 V 149
           V
Sbjct: 335 V 335


>gi|124516716|gb|EAY58224.1| protein of unknown function [Leptospirillum rubarum]
          Length = 213

 Score = 60.3 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 27/67 (40%)

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
            L     +  G  VRI        IS  GIA      GD IAV N  +G  V  +V    
Sbjct: 140 SLEEEEGVRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQIAVFNPMSGSRVQATVTGPD 199

Query: 146 TVRVVVK 152
            VR+ +K
Sbjct: 200 RVRIRLK 206


>gi|291280519|ref|YP_003497354.1| hypothetical protein DEFDS_2151 [Deferribacter desulfuricans SSM1]
 gi|290755221|dbj|BAI81598.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 286

 Score = 60.3 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 4/135 (2%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           + L  + Y       +        V    ++  E+L + ++++ +V  + IRG     I 
Sbjct: 144 YFLLSTYYHEYRIYAYIRGYKEVYVTKSRVSKNEMLTD-KVEKKRVEITKIRGFPCEKID 202

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
           +VV    ++ +  + V+  + + +     +G  V +     N+ I   GI   +A     
Sbjct: 203 NVV---AKKTIPKNRVVTNAYVIQKPDAFKGDYVTVFYKGENVFIKAKGILQENAYRNKY 259

Query: 126 IAVKNIDTGVMVSGS 140
           + + N  +  +    
Sbjct: 260 VKIANPSSKKIFFAK 274


>gi|239907791|ref|YP_002954532.1| putative flagella basal body P-ring formation protein FlgA
           [Desulfovibrio magneticus RS-1]
 gi|239797657|dbj|BAH76646.1| putative flagella basal body P-ring formation protein FlgA
           [Desulfovibrio magneticus RS-1]
          Length = 350

 Score = 59.9 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
             R+ +    V+    +    +I RG +V++I     + ++    A++D + G  I VKN
Sbjct: 271 RARKGVGTGQVLMADDMEPMPLIVRGDQVKLIYQGRAVRLTMLAEAMTDGAPGGKITVKN 330

Query: 131 IDTGVMVSGSVVDTGTVRV 149
                 ++G V D  TV V
Sbjct: 331 SKFAKEITGLVKDKTTVVV 349


>gi|91791416|ref|YP_561067.1| flageller protein FlgA [Shewanella denitrificans OS217]
 gi|91713418|gb|ABE53344.1| Flageller protein FlgA [Shewanella denitrificans OS217]
          Length = 285

 Score = 59.5 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            SV + AG  L +S+L +      N       ++   +    RR +  +  I   +L + 
Sbjct: 165 ASVPLKAGSPLYQSQLTQSWEPLVNSVNLVDLTLDFELDWKARRPIRTEQKISRGMLLQA 224

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
             +  G +V I+L  G++TI T G AL    +G+ + +        V G +V  G V++
Sbjct: 225 STVEVGDEVMIVLFNGSLTIDTTGRALERGYLGEQVFILVDGAKAPVKGVIVQKGVVKI 283


>gi|307721023|ref|YP_003892163.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979116|gb|ADN09151.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas
           autotrophica DSM 16294]
          Length = 291

 Score = 59.5 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 20/148 (13%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
            +FF+  +L+  S+        +     I     L+    ++  +  +  R         
Sbjct: 158 KIFFNYQILAAVSV--------LTARNNIKKDSELSSVNTRKNSIILNKFRAM------P 203

Query: 67  VVGL-----VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
           + GL       +  L  + +I    +   Y++ RG+ V + L    + I  +  AL +  
Sbjct: 204 LQGLHVSRYQAKHNLKANDIITSRDVIGLYLVKRGSNVNVSLQNAGIDIFFSAKALQNGR 263

Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           +GD I+V   +    +   VV      V
Sbjct: 264 LGDSISVMQKNDKK-LKVVVVGRNKAEV 290


>gi|34557026|ref|NP_906841.1| flagellar basal body P-ring biosynthesis protein FlgA [Wolinella
           succinogenes DSM 1740]
 gi|34482741|emb|CAE09741.1| hypothetical protein WS0610 [Wolinella succinogenes]
          Length = 319

 Score = 59.5 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 51/123 (41%), Gaps = 3/123 (2%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHV 81
                A+     +  G+VL+   ++  ++    I   +    KD VG V  +    P+ +
Sbjct: 193 DATLEAIFTKETLKGGDVLDSGSVEIKRIPFERITSEWMR--KDQVGKVSVKSYTSPETL 250

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    +    V+ RG  +R+ + +G +++  +  A  + ++G  I V+N          +
Sbjct: 251 LTQDRIIPKIVVRRGDVIRVRIQEGAVSLEFSATAQQEGAVGSKIRVRNEKNKKSYDVKI 310

Query: 142 VDT 144
           +D 
Sbjct: 311 IDP 313


>gi|226225710|ref|YP_002759816.1| hypothetical protein GAU_0304 [Gemmatimonas aurantiaca T-27]
 gi|226088901|dbj|BAH37346.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 181

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 2/120 (1%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VGLVTRRVLLPDHVIPLSVLH 88
           V +  +  GE L    +  +  T      +          G VTRR +    V+    + 
Sbjct: 61  VAARAMVRGETLQAEDITLVDTTIVWRWSSIDPDTTRPSAGWVTRRAIAAGEVLRAPAVM 120

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
            P V++ GA V  I   G + +  AG+A + A++G  ++V+ ID    + G  +   TVR
Sbjct: 121 APPVVTSGAAVTAIWQDGPLRLVLAGVATNTAAVGAPVSVR-IDRNRRLDGIAIAPNTVR 179


>gi|289549045|ref|YP_003474033.1| flagella basal body P-ring formation protein FlgA [Thermocrinis
           albus DSM 14484]
 gi|289182662|gb|ADC89906.1| flagella basal body P-ring formation protein FlgA [Thermocrinis
           albus DSM 14484]
          Length = 215

 Score = 59.1 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             ++    I  G VL      + +    ++  +       +   +T   +    +I  S+
Sbjct: 90  TVLIAKEDIPKGRVLKPDMFYKEERWGRSVPSDLRLEDIHLSQYITSTFIPKGSIIRRSL 149

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV-----KNIDTGVMVSGSV 141
           L     +  G  V    T GN+ +     +L    IG  + V     KN     ++   V
Sbjct: 150 LKPIPAVEIGQTVEAFYTSGNLELKFHARSLDRGYIGKTVRVLPEGKKNP----ILRAKV 205

Query: 142 VDTGTVRVVV 151
           +  G V+++ 
Sbjct: 206 IAPGKVQILY 215


>gi|116327821|ref|YP_797541.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331367|ref|YP_801085.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116120565|gb|ABJ78608.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125056|gb|ABJ76327.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 294

 Score = 58.7 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIPLS 85
             +  S ++N G  + +   KE +V  S        S   +++G    + +    +    
Sbjct: 173 KVLKASRLLNKGVKIVKEDFKEEEVLTSE---EILDSPGNELLGSTLLKDMNEGEIFRKK 229

Query: 86  VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
            + +   + RG ++ +I  +G++ +     ALS  +IG+ + V        +   VVD  
Sbjct: 230 HVRKIQDVQRGGEILMIYHKGSLVLKAKVKALSSGNIGEEVQVTAHSREGQLRAKVVDKN 289

Query: 146 TV 147
           TV
Sbjct: 290 TV 291


>gi|160901816|ref|YP_001567397.1| flagellar basal body P-ring biosynthesis protein-like protein
           [Petrotoga mobilis SJ95]
 gi|160359460|gb|ABX31074.1| Flagellar basal body P-ring biosynthesis protein-like protein
           [Petrotoga mobilis SJ95]
          Length = 310

 Score = 58.7 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 19/126 (15%)

Query: 25  IGHAVVPSVVINAGEVLNESR----------LKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
               +V S  +  G +LNE            +    V    +R       KDV       
Sbjct: 180 YEEVLVYSKDLTRGTILNEELTEPATKNVLTINNKPVDVELLRSGSYELTKDV------- 232

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
                 ++  + L R   +  G  V +++    + +ST   A+++ + GD ++V+N+++G
Sbjct: 233 --KKGEIVDSTYLKRIPDVKPGDIVTVLVEFEGIRVSTLARAMTNGNFGDTLSVRNVESG 290

Query: 135 VMVSGS 140
            +++G 
Sbjct: 291 NIITGK 296


>gi|332088756|gb|EGI93868.1| flagella basal body P-ring formation protein flgA [Shigella boydii
           5216-82]
          Length = 90

 Score = 58.3 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
            I  +V  ++ R L PD  I L+   + + +  G +V +I +    + +  G AL++A++
Sbjct: 3   DINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAV 62

Query: 123 GDVIAVK 129
                V+
Sbjct: 63  AQNARVR 69


>gi|299066529|emb|CBJ37719.1| putative flagellar protein FlgA precursor [Ralstonia solanacearum
           CMR15]
          Length = 356

 Score = 57.6 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 3/138 (2%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS---IKDVVGLV 71
               S   S      V  +   +G  L++  ++  ++  + +      +    + V  L 
Sbjct: 217 TVPVSFDVSAYERGYVTDLAEASGSPLDQIHMQPKEIDLTALPSKAVLTSLKPEAVANLR 276

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
            RR +     + L  +     ++RG    +    G + + +    L D   G ++ VK  
Sbjct: 277 LRRPMAAGEAVTLDSVESRPAVARGDWATLHAVAGAVNLESRVEVLEDGRNGQLVHVKLP 336

Query: 132 DTGVMVSGSVVDTGTVRV 149
           +    +   VV    V V
Sbjct: 337 NATSPMLARVVGERMVEV 354


>gi|254446190|ref|ZP_05059666.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium
           DG1235]
 gi|198260498|gb|EDY84806.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium
           DG1235]
          Length = 64

 Score = 56.4 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%)

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              ++ +G  V +    G + I+   IA  D + GD+I ++NID+    S  V+    V 
Sbjct: 2   ERALVRKGDVVEVSAVNGLLAITMRAIARQDGTDGDLILLRNIDSAKEFSARVIGENRVE 61

Query: 149 VV 150
           V+
Sbjct: 62  VI 63


>gi|224372860|ref|YP_002607232.1| flagella basal body P-ring formation protein FlgA [Nautilia
           profundicola AmH]
 gi|223589880|gb|ACM93616.1| flagella basal body P-ring formation protein FlgA [Nautilia
           profundicola AmH]
          Length = 199

 Score = 56.0 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            + VI+  E++  +   E+    S           +++     +++  + VI  S     
Sbjct: 85  ATRVIHLNELVQPNTTSEIIKFRSFYSQPLTVIPNNLI---ASKIISKNAVINRSNTKIR 141

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK-NIDTGVMVSGSVVDTGTV 147
            +I +G  V +I    N+ I + G AL+DA++ + + VK N     + +G     G V
Sbjct: 142 PLILKGDSVSVIFKDKNIEIYSKGTALNDANLNENVKVKINT---KIYNGIANKNGEV 196


>gi|251772411|gb|EES52978.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 217

 Score = 55.6 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 29/60 (48%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           ++  G  V +        I  +GIA SD  +GD + V N  +GV +SG V     V VV+
Sbjct: 153 MVKAGDNVHVTARGDGFLIRFSGIAQSDGGVGDAVPVVNPVSGVSMSGQVTGRDAVMVVL 212


>gi|291457156|ref|ZP_06596546.1| putative flagella basal body P-ring formation protein FlgA
           [Bifidobacterium breve DSM 20213]
 gi|291380991|gb|EFE88509.1| putative flagella basal body P-ring formation protein FlgA
           [Bifidobacterium breve DSM 20213]
          Length = 188

 Score = 55.2 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 3   CVRFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           C+         +  L ++ A V     V+    I  GE+++ + ++   +  S +  +YA
Sbjct: 8   CIAAFCAGLAVLFGLGTVLAQVQTAPVVIADRPIARGEIISSADIRVELLPVSTVGSSYA 67

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99
               ++ GL+ +  +  +  I   +     +   G  V
Sbjct: 68  TDADEITGLIAQIDIAVNDPISTHMARDAPLPPTGTTV 105


>gi|229818382|ref|ZP_04448663.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM
           20098]
 gi|229784252|gb|EEP20366.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM
           20098]
          Length = 221

 Score = 54.9 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 6   FLLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
             +F  L V  +     ++ G    V  +  I  G  +    +  M V  S + G   H+
Sbjct: 34  TAMFLCLAVFGVLYSLDAITGTDTIVTAATPIARGTTIRHDDVVMMTVPASPVTGKALHT 93

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
               VG + +  +     +    + +   I+ G  V  I    ++     G
Sbjct: 94  TDKAVGSIAQHPIEAGQPLYAGSVGKAPTITTGDTVLDIAVANSINALIPG 144


>gi|242309211|ref|ZP_04808366.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pullorum MIT 98-5489]
 gi|239524252|gb|EEQ64118.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pullorum MIT 98-5489]
          Length = 298

 Score = 54.9 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 52/125 (41%), Gaps = 3/125 (2%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP-DHV 81
                 ++ +  I+ G+ +     + +++    +  +     +  +G V  R   P + +
Sbjct: 172 DATLEGIITASEISGGQTITYQNSRIVEIPFDKVGSDLMQQGE--LGKVAVRSYTPENVL 229

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
           +    L    V+ +G K+ + + +  + +     AL +A+IGDVI  K ++        +
Sbjct: 230 VTKDRLIAKRVVKKGDKIIVSVQEEGVILEFILEALKNAAIGDVIKAKALEGKKTYEVKI 289

Query: 142 VDTGT 146
           +D G 
Sbjct: 290 IDEGR 294


>gi|296122948|ref|YP_003630726.1| flagella basal body P-ring formation protein FlgA [Planctomyces
           limnophilus DSM 3776]
 gi|296015288|gb|ADG68527.1| flagella basal body P-ring formation protein FlgA [Planctomyces
           limnophilus DSM 3776]
          Length = 423

 Score = 53.3 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
              +  GE++ +  L          +         V+G+  RR      ++ L  L    
Sbjct: 268 RRAMQKGEIVQQGDLMWK---LDTAQAECCTEPGQVIGMECRRATKAGELVNLKDLASAP 324

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +I  G  V   L    + I     +LS A+ G+ + + ++D    V   V    T
Sbjct: 325 LIRNGDIVTASLRVKGIVIRGQYKSLSTAARGETVTLVSLD---DVRERVTAVAT 376


>gi|254420864|ref|ZP_05034588.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           sp. BAL3]
 gi|196187041|gb|EDX82017.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           sp. BAL3]
          Length = 203

 Score = 53.3 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
           +  +         VI+R   VR+    G + +S  G A+ +A++G+ +AV N  +  ++ 
Sbjct: 116 NRPVYRPAGGGQQVIARNDMVRVTYQVGGVNLSIMGKAMRNAALGEPVAVLNTASNRVID 175

Query: 139 GSVVDTGT 146
                 G 
Sbjct: 176 AVASGPGQ 183


>gi|329849715|ref|ZP_08264561.1| distal basal body ring component protein [Asticcacaulis
           biprosthecum C19]
 gi|328841626|gb|EGF91196.1| distal basal body ring component protein [Asticcacaulis
           biprosthecum C19]
          Length = 193

 Score = 53.3 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 30/51 (58%)

Query: 96  GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           G  + +  + G +T++  G+A  DA++GD+I ++N  +  M+   V+ +G 
Sbjct: 125 GEAISVTWSSGGLTLTITGVAQKDAAVGDLIQIQNPSSKKMIDAVVIGSGR 175


>gi|294013080|ref|YP_003546540.1| flagellar protein [Sphingobium japonicum UT26S]
 gi|292676410|dbj|BAI97928.1| flagellar protein [Sphingobium japonicum UT26S]
          Length = 182

 Score = 52.9 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           + R  V+ +G  V+++    N ++S   +A  D ++G  I V+    G  +   VV+ G 
Sbjct: 114 VAREAVVKKGDPVQLMAGNENFSVSRMMVADEDGAVGQTIRVREDKKGAPILAQVVEMGI 173

Query: 147 VRV 149
           VRV
Sbjct: 174 VRV 176


>gi|291276510|ref|YP_003516282.1| flagellum ring component [Helicobacter mustelae 12198]
 gi|290963704|emb|CBG39537.1| Putative flagellum ring component [Helicobacter mustelae 12198]
          Length = 221

 Score = 52.6 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 1/118 (0%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             V   + I   + + +       +    ++ +    + D+  +  +  +    +I  S+
Sbjct: 99  KVVFAKIGIKKSQDITKENTLIKTIPLGALQNS-PIGLSDIDNISAKIFIPSGGMIVNSL 157

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           +    +I +      I  +GNM I    IA  D +   +I   N ++   +   V+  
Sbjct: 158 VANKILIRKNDSFLAIYKEGNMQIQLTLIAKQDGAKDAIIEAYNPESKKTLRVRVLSN 215


>gi|103488384|ref|YP_617945.1| flagellar protein [Sphingopyxis alaskensis RB2256]
 gi|98978461|gb|ABF54612.1| flagellar protein [Sphingopyxis alaskensis RB2256]
          Length = 170

 Score = 51.4 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 89  RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
              V+ RG  VR+ +   N +IS A IA+ D  +GD IA++  D    +S +V   G  R
Sbjct: 108 SAPVVRRGDHVRVSIDTPNYSISYAAIAVEDGRVGDSIALRGSDRKSTLSATVTGPGAAR 167

Query: 149 V 149
           +
Sbjct: 168 I 168


>gi|296282285|ref|ZP_06860283.1| flagellar protein [Citromicrobium bathyomarinum JL354]
          Length = 192

 Score = 51.4 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM--VSGSVVDTGTVRV 149
           V+SRG  V I++  G  ++S   +AL + +IG  I V+         +   VV  G V V
Sbjct: 130 VVSRGETVAIVVEGGGFSLSRQAVALEEGAIGSWIKVRPAQDRKAEPLRAQVVRPGQVAV 189

Query: 150 VVK 152
            ++
Sbjct: 190 RLR 192


>gi|255620617|ref|XP_002540130.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
 gi|223498940|gb|EEF22253.1| Flagella basal body P-ring formation protein flgA precursor,
           putative [Ricinus communis]
          Length = 179

 Score = 51.0 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           +++YV +  +    V+G  +  +  +  G+ ++ ++L  ++   + +    A     V+G
Sbjct: 95  WTVYVQANVT----VVGDYIAAAAPLVQGQPIDANQLTTLKGDLTMLPAGVATDASQVIG 150

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGA 97
                 L P   + L  L    V+  G 
Sbjct: 151 RSATVSLPPGTPLRLDTLRSKPVVQSGQ 178


>gi|148554195|ref|YP_001261777.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1]
 gi|148499385|gb|ABQ67639.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1]
          Length = 191

 Score = 51.0 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
                + +G  V+++    + +IS    A+ DA IG  + V     G  +   V+D G V
Sbjct: 126 SANAAVRKGDPVQLVAQGSSFSISVDATAMEDADIGRRVRVATNSKGSTIFAEVIDVGRV 185

Query: 148 RVV 150
           R++
Sbjct: 186 RLI 188


>gi|212716655|ref|ZP_03324783.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660359|gb|EEB20934.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM
           16992]
          Length = 229

 Score = 51.0 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 13/143 (9%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           +++               V+ +  I  G V+    L    +       N  H   D VGL
Sbjct: 49  AVFAALQCVRLTISTQPVVIAAQPIAKGSVITADSLALRDLPYDEALRNVFHDCDDAVGL 108

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRG---AKVRIILTQGNMTI---------STAGIALS 118
           + +  +    ++  ++     V+  G    +VR+  +  N+++         +  G A  
Sbjct: 109 IAQVDVAEGGIVTSTMARASPVVPEGYTAIEVRLASSADNLSLGDIVTLSSATIFGEATP 168

Query: 119 DASIG-DVIAVKNIDTGVMVSGS 140
           +AS   D + ++ + +G +++  
Sbjct: 169 EASPDTDAVTLRELCSGAILTAK 191


>gi|316936686|gb|ADU60339.1| FlgA [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 132

 Score = 50.6 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           +     G+ V  +  I  G  L  + +   +     +       I+ +   V+ R L P 
Sbjct: 48  VNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 107

Query: 80  HVIPLSVLHRPYVISRGAKVRIILT 104
             + L+++ + + +  G +V++I  
Sbjct: 108 QPVQLTMIRQAWRVKAGQRVQVIAN 132


>gi|302383957|ref|YP_003819780.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194585|gb|ADL02157.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 210

 Score = 50.2 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%)

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
           P        VI+R   V +  + G + ++  G A  DA+ G+ + + N+ +G  +     
Sbjct: 128 PQRQARAARVIARNDMVEVAYSVGGVMLTVTGRATRDAAAGESVPILNVASGRTIDAVAT 187

Query: 143 DTGT 146
             G 
Sbjct: 188 GPGR 191


>gi|23466106|ref|NP_696709.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705]
 gi|23326839|gb|AAN25345.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705]
          Length = 220

 Score = 49.5 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  L+++ A V     VV +  I  G+++  + ++   +  S I  ++A +I+DVVG V 
Sbjct: 50  LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAIGPSWACNIEDVVGKVA 109

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 110 QIDIEAADPISTHMARDAPVAPTGTTV 136


>gi|307293793|ref|ZP_07573637.1| flagellar protein [Sphingobium chlorophenolicum L-1]
 gi|306879944|gb|EFN11161.1| flagellar protein [Sphingobium chlorophenolicum L-1]
          Length = 182

 Score = 49.1 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 31/63 (49%)

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           + R  V+ +G  V+++    + ++S   +A  D ++G  I V+       +   VV+ G 
Sbjct: 114 IAREAVVKKGDPVQLMAGNASFSVSRMMVADEDGAVGQTIRVREDKKAAPILAQVVEMGI 173

Query: 147 VRV 149
           VRV
Sbjct: 174 VRV 176


>gi|330719627|gb|EGG98195.1| Flagellar basal-body P-ring formation protein flgA [gamma
           proteobacterium IMCC2047]
          Length = 205

 Score = 48.7 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 10  FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           + +YV      +       V  +  +   + L+ S +   +   S +   Y  S+ +V+G
Sbjct: 101 WQIYVPVSVKAY----QKVVTAAAPLTREQRLDASVIALTEKEVSRLTQGYYSSVNEVLG 156

Query: 70  LVTRRVLLPDHVIPLSVLHRPYV 92
              +R +  + VI  +++    V
Sbjct: 157 KSLKRPVPLNGVIQPNMVVEAIV 179


>gi|225351088|ref|ZP_03742111.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158544|gb|EEG71786.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 229

 Score = 47.9 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
               V+ +  I  G V+    L    +       N  H   D VGL+ +  +    ++  
Sbjct: 63  TQPVVIAAQPIAKGSVITADSLALRDLPYDKALRNVFHDCADAVGLIAQVDVAEGGIVTS 122

Query: 85  SVLHRPYVISRG---AKVRIILTQGNMTI---------STAGIAL-SDASIGDVIAVKNI 131
           ++     V+S G    +VR+  +  N+++         +  G A    +   D + ++ +
Sbjct: 123 TMARASPVVSEGYTVIEVRLASSADNLSLGDVVTLSSATIFGEATPETSPDTDAVTLREL 182

Query: 132 DTGVMVSGS 140
            +G +++  
Sbjct: 183 CSGAILTAK 191


>gi|149184201|ref|ZP_01862519.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21]
 gi|148831521|gb|EDL49954.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21]
          Length = 88

 Score = 47.9 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG---VMVSGSVVDTGTV 147
            +I RG  V I+      T++  G A  D + G  I V+   +G     +   V+  G V
Sbjct: 26  KMIKRGETVSILARGKGFTLTRHGSAAEDGAQGQWIKVR--ASGERLETLRAVVLGPGKV 83


>gi|239620983|ref|ZP_04664014.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239516084|gb|EEQ55951.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 208

 Score = 47.9 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  L+++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 38  LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 97

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 98  QIDIEAADPISTHMARDAPVAPTGTTV 124


>gi|227546443|ref|ZP_03976492.1| cation transport ATPase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|322689956|ref|YP_004209690.1| hypothetical protein BLIF_1777 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|227213100|gb|EEI80979.1| cation transport ATPase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|320461292|dbj|BAJ71912.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 189

 Score = 47.5 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  L+++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 19  LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 79  QIDIEAADPISTHMARDAPVAPTGTTV 105


>gi|312133843|ref|YP_004001182.1| flga [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773134|gb|ADQ02622.1| FlgA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 189

 Score = 47.5 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  L+++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 19  LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 79  QIDIEAADPISTHMARDAPVAPTGTTV 105


>gi|323702114|ref|ZP_08113782.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
           574]
 gi|323532996|gb|EGB22867.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
           574]
          Length = 234

 Score = 47.2 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VVP   I    +L    +K   +    I+   A   KDVVG VTR  L P+  I LS L
Sbjct: 41  VVVPKQTIGPNTMLTAQMVKVKDIPVEMIQPGTAMDTKDVVGKVTRSDLYPEEPILLSRL 100

Query: 88  HR 89
           H+
Sbjct: 101 HQ 102


>gi|317483025|ref|ZP_07942027.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915526|gb|EFV36946.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
          Length = 208

 Score = 47.2 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  ++++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 38  LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 97

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 98  QIDIEAADPISTHMARDAPVAPTGTTV 124


>gi|46190327|ref|ZP_00121647.2| COG2217: Cation transport ATPase [Bifidobacterium longum DJO10A]
 gi|189440534|ref|YP_001955615.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
           longum DJO10A]
 gi|189428969|gb|ACD99117.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
           longum DJO10A]
          Length = 189

 Score = 46.8 bits (110), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  ++++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 19  LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 79  QIDIEAADPISTHMARDAPVAPTGTTV 105


>gi|253577450|ref|ZP_04854765.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843150|gb|EES71183.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 377

 Score = 46.8 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 32/69 (46%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V +  I AG+ L    ++ ++V ++ +  +     + VVG + +  L  +  +  S+
Sbjct: 65  RILVAARPIPAGKTLGNGDIQAVEVVHALVPSDSFKDPQMVVGKIAKIDLQSNTPLIASM 124

Query: 87  LHRPYVISR 95
           L+    I R
Sbjct: 125 LYEEGAIPR 133


>gi|322691896|ref|YP_004221466.1| hypothetical protein BLLJ_1707 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456752|dbj|BAJ67374.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 189

 Score = 46.8 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  ++++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 19  LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 79  QIDIEAADPISTHMARDAPVAPTGTTV 105


>gi|261406226|ref|YP_003242467.1| SAF domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261282689|gb|ACX64660.1| SAF domain protein [Paenibacillus sp. Y412MC10]
          Length = 367

 Score = 46.8 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  A VP   I  G  +    +KE+++      GN     +++ G   +  LL    I  
Sbjct: 66  MQAAWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLQGMPITG 125

Query: 85  SVL 87
           ++L
Sbjct: 126 AML 128


>gi|291516490|emb|CBK70106.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
           longum subsp. longum F8]
          Length = 189

 Score = 46.8 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  ++++ A V     VV +  I  G+++  + ++   +  S    ++  +I+DVVG V 
Sbjct: 19  LFGIEAVLAVVKTEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 79  QIDIEAADPISTHMARDAPVAPTGTTV 105


>gi|320459290|dbj|BAJ69911.1| conserved hypothetical protein [Bifidobacterium longum subsp.
          infantis ATCC 15697]
          Length = 172

 Score = 46.8 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 13 YVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           +  L+++ A V     VV +  I  G+++    ++   +  S I  ++A +I+DVVG V
Sbjct: 1  MLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKV 60

Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 61 AQIDIEAADPISTHMARDAPVTPTGTTV 88


>gi|257068486|ref|YP_003154741.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810]
 gi|256559304|gb|ACU85151.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810]
          Length = 211

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    +  G  L+ + L+  ++    +    A  I+DVVG   R  + P   +   +L 
Sbjct: 50  VVADAELTPGTALSRADLRTARIAPELLPEGAAQQIEDVVGQTARLPIEPGTPLLPGLLE 109

Query: 89  RPYV 92
            P  
Sbjct: 110 DPAA 113


>gi|294508676|ref|YP_003572735.1| flagellar protein flgA [Salinibacter ruber M8]
 gi|294345005|emb|CBH25783.1| Flagellar protein flgA [Salinibacter ruber M8]
          Length = 242

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-----RGNYAHSIKDVVGLVT 72
            +L  +     +     I  G  +    ++   +  S++     R +   + +    LV 
Sbjct: 102 ATLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVA 161

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
            R L P+ V+    +  PY +  G    +   +G ++   +        + D++ V   D
Sbjct: 162 DRYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVSFRLSCTVRETGFVEDLVRVYCPD 221

Query: 133 TGVMVSGSV 141
           T       V
Sbjct: 222 TRKTYQARV 230


>gi|306817241|ref|ZP_07450987.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307700399|ref|ZP_07637438.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris
           FB024-16]
 gi|304649921|gb|EFM47200.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614384|gb|EFN93614.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris
           FB024-16]
          Length = 198

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 4   VRFLLFFSLYVLSL-----------DSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQ 50
           +RF  F++                  ++F        A+V  V I AG  +N   L+E +
Sbjct: 1   MRFKRFWNWRFPLAAASAALALVVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERR 60

Query: 51  VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
           +    +  +Y     +V G      L P  V+   +L    +
Sbjct: 61  LDPGALPQHYFVQAGEVAGKKAAVALEPGTVVAPGLLLENSL 102


>gi|227876349|ref|ZP_03994461.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC
           35243]
 gi|269975913|ref|ZP_06182917.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris
           28-1]
 gi|227842890|gb|EEJ53087.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC
           35243]
 gi|269935741|gb|EEZ92271.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris
           28-1]
          Length = 198

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 4   VRFLLFFSLYVLSL-----------DSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQ 50
           +RF  F++                  ++F        A+V  V I AG  +N   L+E +
Sbjct: 1   MRFKRFWNWRFPLAAALAALALVVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERR 60

Query: 51  VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
           +    +  +Y     +V G      L P  V+   +L    +
Sbjct: 61  LDPGALPQHYFVQAGEVAGKKAAVALEPGTVVAPGLLLENSL 102


>gi|213693112|ref|YP_002323698.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|296454899|ref|YP_003662043.1| SAF domain-containing protein [Bifidobacterium longum subsp. longum
           JDM301]
 gi|213524573|gb|ACJ53320.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|296184331|gb|ADH01213.1| SAF domain protein [Bifidobacterium longum subsp. longum JDM301]
          Length = 208

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 14  VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           +  L+++ A V     VV +  I  G+++    ++   +  S I  ++A +I+DVVG V 
Sbjct: 38  LFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKVA 97

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKV 99
           +  +     I   +     V   G  V
Sbjct: 98  QIDIEAADPISTHMARDAPVTPTGTTV 124


>gi|332798621|ref|YP_004460120.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1]
 gi|332696356|gb|AEE90813.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1]
          Length = 264

 Score = 46.4 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 5/139 (3%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+   L  S           S     V  +  I     +    +    +T S+   NY
Sbjct: 16  VTCISLYLIVSNLQKGGSIALNSKTITVVTATQNIAPYTKITAEMVSAQNITASDGIQNY 75

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST---AGIA- 116
              I DVVG + +  +    VI  + +     IS G   ++      +TI+     G+A 
Sbjct: 76  FTQIGDVVGKICKSDIYAGEVITSNRIAGEKDISLGLATQLENGMRAVTIAVDVEQGVAA 135

Query: 117 -LSDASIGDVIAVKNIDTG 134
            +   +  DVI V  +D G
Sbjct: 136 TIKAGNYVDVIYVNKVDGG 154


>gi|94969951|ref|YP_591999.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552001|gb|ABF41925.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 180

 Score = 46.0 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 74  RVLLPDHVIP--LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
           R     +             V+  G ++ +I     + ++T  ++LS   +G+ I V+  
Sbjct: 101 RPQNIGNPSRSLTHQPRPAPVVHAGNRLTLIRQGNGVRLTTTVVSLSAGRVGESIHVREY 160

Query: 132 DTGVMVSGSVVDTGTV 147
            +   ++  VVD  TV
Sbjct: 161 RSSRSINSVVVDAHTV 176


>gi|239908022|ref|YP_002954763.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus
           RS-1]
 gi|239797888|dbj|BAH76877.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus
           RS-1]
          Length = 300

 Score = 46.0 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVI-GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
            +R+    S+    ++    +      VV +  I  G  L+ S +K              
Sbjct: 23  TIRW--LGSVRAPKVEQAKPAAPKVEVVVAARAIPKGGRLDASMVKSKGFEAEAAPQGAL 80

Query: 62  HSIKDVVGLVTRRVLLPDHVIPL 84
             +++  G ++ R + PD  I  
Sbjct: 81  RDVQEAYGRISARDISPDDPITP 103


>gi|256833036|ref|YP_003161763.1| SAF domain-containing protein [Jonesia denitrificans DSM 20603]
 gi|256686567|gb|ACV09460.1| SAF domain protein [Jonesia denitrificans DSM 20603]
          Length = 241

 Score = 46.0 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
           L+  S+++ +        +  A V +  +  G+ + E+ L+ + V       NY      
Sbjct: 36  LVALSVWIGAWALDSGRTLDTAFVAARTLQPGDAITEADLQAVDVELGQHLNNYLTPETM 95

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVI 93
             GLV    +    ++ ++       +
Sbjct: 96  GEGLVAVVPVHQGQLVAVTSTGSAADV 122


>gi|329930829|ref|ZP_08284228.1| SAF domain protein [Paenibacillus sp. HGF5]
 gi|328934531|gb|EGG31036.1| SAF domain protein [Paenibacillus sp. HGF5]
          Length = 367

 Score = 46.0 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A VP   I  G  +    +KE+++      GN     +++ G   +  LL    I  ++L
Sbjct: 69  AWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLRGMPITGAML 128


>gi|310288050|ref|YP_003939309.1| hypothetical protein BBIF_1530 [Bifidobacterium bifidum S17]
 gi|309251987|gb|ADO53735.1| conserved hypothetical protein [Bifidobacterium bifidum S17]
          Length = 219

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 36/112 (32%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
               + +        + V    VV + +I  G  +    ++  Q+  S+       +   
Sbjct: 32  CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 91

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
             G + +  +     +  +++ R  V   G  V  +   G +    AG  + 
Sbjct: 92  AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143


>gi|224283683|ref|ZP_03647005.1| hypothetical protein BbifN4_07627 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 213

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 36/112 (32%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
               + +        + V    VV + +I  G  +    ++  Q+  S+       +   
Sbjct: 26  CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 85

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
             G + +  +     +  +++ R  V   G  V  +   G +    AG  + 
Sbjct: 86  AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 137


>gi|94495417|ref|ZP_01301997.1| flagellar protein [Sphingomonas sp. SKA58]
 gi|94424805|gb|EAT09826.1| flagellar protein [Sphingomonas sp. SKA58]
          Length = 193

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
           V+ +G  V+++    + ++S   IA    ++GD I V+       V   +VD G VR+
Sbjct: 130 VVRKGDPVQLMAGNASFSVSRMMIADEGGAVGDTIRVREDRKSPPVFAQIVDMGVVRI 187


>gi|311064926|ref|YP_003971652.1| hypothetical protein BBPR_1589 [Bifidobacterium bifidum PRL2010]
 gi|313140839|ref|ZP_07803032.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171]
 gi|310867246|gb|ADP36615.1| Conserved hypothetical protein [Bifidobacterium bifidum PRL2010]
 gi|313133349|gb|EFR50966.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171]
          Length = 219

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 36/112 (32%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
               + +        + V    VV + +I  G  +    ++  Q+  S+       +   
Sbjct: 32  CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 91

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
             G + +  +     +  +++ R  V   G  V  +   G +    AG  + 
Sbjct: 92  AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143


>gi|315646608|ref|ZP_07899726.1| SAF domain protein [Paenibacillus vortex V453]
 gi|315278251|gb|EFU41571.1| SAF domain protein [Paenibacillus vortex V453]
          Length = 365

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A VP   I  G  +    +KE+++       N     +++ G   +  LL    I  ++L
Sbjct: 69  AWVPVRDIPPGHFIEAKDIKEVRLPYEGASNNLLSVKEEIAGKGVKIELLQGTPITRTML 128


>gi|85710157|ref|ZP_01041222.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1]
 gi|85688867|gb|EAQ28871.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1]
          Length = 182

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%)

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
               V++RG  + I +     T+  AG A+ + S GD IAV+       V   +   G
Sbjct: 118 KAEPVVTRGDPLTIAVRGRGFTVQQAGEAMENGSPGDWIAVRTSRDAQPVRARIERPG 175


>gi|103487065|ref|YP_616626.1| N-acylneuraminate-9-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
 gi|98977142|gb|ABF53293.1| N-acetylneuraminate synthase [Sphingopyxis alaskensis RB2256]
          Length = 749

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+  ++V +  I AG+ + +  ++    +       Y     ++VG + +R ++     
Sbjct: 400 EVLAKSLVAARPIRAGQQIADEDIQIR--SPGQGLQPYFR--AELVGRIAKRDMIEGDFF 455

Query: 83  PLSVLHRPYVISR 95
             S L      +R
Sbjct: 456 FQSDLADAVASAR 468


>gi|269836549|ref|YP_003318777.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM
           20745]
 gi|269785812|gb|ACZ37955.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM
           20745]
          Length = 326

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
           F  +   + D        + VV +  I A  VL+E  ++  +V  + +    A +   VV
Sbjct: 27  FSGVLGETQDDGAEPTKANVVVAARDIPANTVLSEDDIEIAEVDATGVAPGSATAPAQVV 86

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYV 92
           G+     L+    I  + L  P +
Sbjct: 87  GMAVSGNLVKGQQILSANLLAPGL 110


>gi|168699692|ref|ZP_02731969.1| hypothetical protein GobsU_09224 [Gemmata obscuriglobus UQM 2246]
          Length = 282

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
            ++    +V + ++   + +   G A SD  +G  + V+N ++  +V   V   G 
Sbjct: 217 VLVRARQRVEVSVSSVGLKMIMTGEAQSDGLLGQTVMVQNSESKKLVPAKVTGAGK 272


>gi|134299960|ref|YP_001113456.1| SAF domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134052660|gb|ABO50631.1| SAF domain protein [Desulfotomaculum reducens MI-1]
          Length = 234

 Score = 45.6 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VVP+  +    ++ +  +K   +    I+   A + +DVVG +TR  L P+  I L+ +
Sbjct: 41  VVVPTQPLGPKTLITDKMVKVKDIPVELIQPGTAIAPQDVVGKITRSELYPEEPIMLNRI 100

Query: 88  HR 89
           ++
Sbjct: 101 YK 102


>gi|332982956|ref|YP_004464397.1| SAF domain-containing protein [Mahella australiensis 50-1 BON]
 gi|332700634|gb|AEE97575.1| SAF domain protein [Mahella australiensis 50-1 BON]
          Length = 211

 Score = 45.2 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +     INAG  + E+ L  MQV N+ I       + DV+G        P  +I    L 
Sbjct: 35  LTAKTTINAGMKIEETMLDTMQVPNTAIPSGAMTDVNDVIGKTAAVTRAPGDIIFRDALS 94

Query: 89  RPYVISR 95
               + +
Sbjct: 95  EQEPVLK 101


>gi|326386924|ref|ZP_08208538.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208604|gb|EGD59407.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 168

 Score = 45.2 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
            VI RG  V + +T     +S +  A+   ++G  I V+       V   VV  G V V
Sbjct: 107 PVIQRGQLVTVAVTGDGFAVSQSAEAMEAGAVGAWIRVRTGPKTDPVQARVVRPGLVEV 165


>gi|306823596|ref|ZP_07456971.1| SAF domain protein [Bifidobacterium dentium ATCC 27679]
 gi|309802885|ref|ZP_07696986.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022]
 gi|304553303|gb|EFM41215.1| SAF domain protein [Bifidobacterium dentium ATCC 27679]
 gi|308220352|gb|EFO76663.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022]
          Length = 213

 Score = 45.2 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 18/142 (12%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           +++        +    AVV +  I  G+ +  S +    +       N  H+I DV G+V
Sbjct: 40  VFLGLQCLRSTAETRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMV 99

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM----------TISTAGIALS 118
            +  +    ++  ++     +I +G     VR+  +   +           +   G A  
Sbjct: 100 AQIDIPDGGIVTATMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGD 159

Query: 119 DASIGDVIAVKNIDTGVMVSGS 140
           D        ++ + +   V G 
Sbjct: 160 DGGA-----LRELASRATVIGK 176


>gi|229587471|ref|YP_002860509.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
 gi|229260129|gb|ACQ51166.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
          Length = 242

 Score = 44.8 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           L +L  S     ++   VIN GE++NE  ++E  +  +NI  N  +  KD++G +T   L
Sbjct: 42  LPTLNKSSKAPVIIAKRVINEGELINEGDIEEKIMPINNIAKNTINVKKDLIGKITVNKL 101

Query: 77  LPDHVIPLSVL 87
            P+  I    +
Sbjct: 102 EPNEQIKKYDV 112


>gi|315452623|ref|YP_004072893.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter
           felis ATCC 49179]
 gi|315131675|emb|CBY82303.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter
           felis ATCC 49179]
          Length = 223

 Score = 44.8 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 40  VLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99
           VL    +   +     I  +Y ++        T+  L  + ++ +  +    ++ +    
Sbjct: 119 VLYAQSVPFERFNTLPIDSSYINNSS------TKSFLGANTLLSVDKVAPKILVYKNEIF 172

Query: 100 RIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
              LT G++++ T+  AL + S+  VI   N+ +   V   +     G V
Sbjct: 173 SATLTSGSISLETSLQALQNGSLNQVIEALNVQSKKRVQVRITGLLKGEV 222


>gi|160940635|ref|ZP_02087978.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436370|gb|EDP14137.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC
           BAA-613]
          Length = 288

 Score = 44.8 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 22/128 (17%)

Query: 20  LFASVIGHAVVPSVV---------------INAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           L A+VI    +P V                +  G+ +    L+ ++V + N+  + A  +
Sbjct: 15  LLAAVIAFVAIPVVTKKTSSTLEIVRVVNPLERGQQITAQDLELIEVGSYNLPASVAIRL 74

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS----TAGIALSDA 120
           +DV G      L+P   I  + +    +          +  G + IS    T   ALSD 
Sbjct: 75  EDVTGTYAAASLMPGDYILPNKVSSSPL--SSDPALYSIPDGMVAISVTTQTLATALSDK 132

Query: 121 -SIGDVIA 127
              GD+I 
Sbjct: 133 LQSGDIIR 140


>gi|167628702|ref|YP_001679201.1| hypothetical protein HM1_0585 [Heliobacterium modesticaldum Ice1]
 gi|167591442|gb|ABZ83190.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 270

 Score = 44.8 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 10/142 (7%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   LF    V  L +   S     V  +  I AGE +    +K ++V + N+  N   
Sbjct: 14  CIALSLFICFAVTPLFNSGISKKTDIVRVARDIKAGEQITRDMVKTVEVGSYNLPDNVVR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S+   +G      + P   I  + L             +   +  M+++    + S+   
Sbjct: 74  SLDAALGKYAAADMAPGDYILNTKLTDSPAAENAYLYNLTGEKQAMSVTIK--SFSNGLS 131

Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144
           G +I      +G +VS  V+  
Sbjct: 132 GKLI------SGDIVS--VIAP 145


>gi|89098203|ref|ZP_01171088.1| hypothetical protein B14911_10592 [Bacillus sp. NRRL B-14911]
 gi|89087060|gb|EAR66176.1| hypothetical protein B14911_10592 [Bacillus sp. NRRL B-14911]
          Length = 326

 Score = 44.5 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 8  LFFSLYVLSLDSLFASVIGH-------AVV-PSVVINAGEVLNESRLKEMQVTNSNIRGN 59
          +  S++V++   ++ +VI         A+V P VVI   +V+++  L   Q   + +   
Sbjct: 11 VLLSVFVIAFIIVWDTVIKDKIDSVEVAIVRPGVVIEKNQVISKDLLMMEQRNRATLVEG 70

Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
            + + DVVG   ++ L  + ++    + 
Sbjct: 71 TVYDMDDVVGYEAKQKLYGNSILSERDVE 99


>gi|237752267|ref|ZP_04582747.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376509|gb|EEO26600.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 303

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 69  GLVTRRVLLP-DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           G V  R   P D +I    L    V+ +G ++ I + +  + +     A  DA++GDVI 
Sbjct: 221 GRVAVRSYTPKDVIITRDRLISKRVVKKGDRILISVVENGVLLEFTLEAQKDAAVGDVIK 280

Query: 128 VKNIDTGVMVSGSVVDTGT 146
            + I+        +++ G 
Sbjct: 281 ARVINGKKTYEVEIIEEGK 299


>gi|171741303|ref|ZP_02917110.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC
           27678]
 gi|283455337|ref|YP_003359901.1| hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1]
 gi|171276917|gb|EDT44578.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC
           27678]
 gi|283101971|gb|ADB09077.1| Hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1]
          Length = 213

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 18/129 (13%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
              AVV +  I  G+ +  S +    +       N  H+I DV G+V +  +    ++  
Sbjct: 53  TRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMVAQIDIPDGGIVTA 112

Query: 85  SVLHRPYVISRGAK---VRIILTQGNM----------TISTAGIALSDASIGDVIAVKNI 131
           ++     +I +G     VR+  +   +           +   G A  D        ++ +
Sbjct: 113 TMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGDDGGA-----LREL 167

Query: 132 DTGVMVSGS 140
            +   V G 
Sbjct: 168 ASRATVIGK 176


>gi|169834865|ref|YP_001715910.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408972|gb|ACA57382.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 242

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           L +L  S     ++   VI+ GE++NE  ++E  +  +NI  N  +  KD++G +T   L
Sbjct: 42  LPTLNKSSKAPVIIAKRVISEGELINEGDIEEKIMPINNIAKNTINVKKDLIGKITVNKL 101

Query: 77  LPDHVIPLSVL 87
            P+  I    +
Sbjct: 102 EPNEQIKKYDV 112


>gi|83815670|ref|YP_446740.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855]
 gi|83757064|gb|ABC45177.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855]
          Length = 242

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 5/129 (3%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-----RGNYAHSIKDVVGLVT 72
            +L  +     +     I  G  +    ++   +  S++     R +   + +    LV 
Sbjct: 102 ATLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVA 161

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
            R L P+ V+    +  PY +  G    +   +G +    +        + DV+ V    
Sbjct: 162 DRYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVRFRLSCTVRETGFVEDVVRVYCPG 221

Query: 133 TGVMVSGSV 141
           T       V
Sbjct: 222 TRKTYQARV 230


>gi|329945240|ref|ZP_08293071.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
          taxon 170 str. F0386]
 gi|328529283|gb|EGF56204.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
          taxon 170 str. F0386]
          Length = 261

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           +V +  ++AG ++ E  +   ++  S++  +   S + VVG      L P  V+  S+ 
Sbjct: 27 VLVAARQVSAGTLITEQDVTTSRLPASSLPQSGLASSEQVVGTRAAITLEPGTVLTSSMT 86

Query: 88 H 88
           
Sbjct: 87 S 87


>gi|332187912|ref|ZP_08389645.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17]
 gi|332012073|gb|EGI54145.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17]
          Length = 165

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%)

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
           +    VI RG  V I       +I+  G+A++DA+ G    V+       +    + +G 
Sbjct: 98  VKAEPVIRRGDPVVIEAGSDGFSITREGVAMADAAPGGHFPVRIDAARQPIQAVALASGR 157


>gi|160893683|ref|ZP_02074467.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50]
 gi|156864668|gb|EDO58099.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50]
          Length = 286

 Score = 44.5 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 7/131 (5%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V     I+ GE +    +K ++V + N+  +   
Sbjct: 14  CIVLSLIICFAVTPLFNKAMSEKTEIVRVVKPISVGEEITSDMVKTIEVGSYNLPDDVVK 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
               VVG      L P   I  S +             +   +  ++++    A ++   
Sbjct: 74  HSDTVVGAFASADLAPGDYILTSKIAEEPAAENAYLYHLTGEKQAISVTVK--AFANGLS 131

Query: 121 ---SIGDVIAV 128
                GD+++V
Sbjct: 132 GKLKSGDIVSV 142


>gi|313682363|ref|YP_004060101.1| flagella basal body p-ring formation protein flga [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155223|gb|ADR33901.1| flagella basal body P-ring formation protein FlgA [Sulfuricurvum
           kujiense DSM 16994]
          Length = 287

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
           R  L    ++ +  +    ++ +  KV + +    + +     A  + ++ D+I ++  D
Sbjct: 211 RSNLKGGQLLTVRNIETIPLVLKNEKVIVEVQDKGVIVEFGARATQEGALYDIITIQKND 270

Query: 133 TGVMVSGSVVDTGTVR 148
            G      V+    V 
Sbjct: 271 -GKRAKAKVIGENRVE 285


>gi|148253053|ref|YP_001237638.1| hypothetical protein BBta_1513 [Bradyrhizobium sp. BTAi1]
 gi|146405226|gb|ABQ33732.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 309

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 28/144 (19%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH----SIKDVVGLVTRRVLLPDHVIP 83
            +V +  I  G +L +  +    V    +R  Y      S  + +G ++RR    D  + 
Sbjct: 47  VLVAARTIALGTLLRKEDIAWKDVMPGEVRPGYLMRGQVSEAEFLGAISRRNFAQDEPLI 106

Query: 84  LSVLHRP-------YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT--- 133
            S   +P        V+  G++   I        S AG+AL     GD + V    +   
Sbjct: 107 ASEFVKPGDRQFLAAVLKPGSRAISIFVDAAQ--SAAGMAL----PGDRVDVILTQSFGE 160

Query: 134 ------GVMVSGSVVDTGTVRVVV 151
                    VS +++    VRV+ 
Sbjct: 161 QATDPGRKTVSETMLRD--VRVIA 182


>gi|253997846|ref|YP_003049909.1| N-acylneuraminate-9-phosphate synthase [Methylovorus sp. SIP3-4]
 gi|253984525|gb|ACT49382.1| N-acylneuraminate-9-phosphate synthase [Methylovorus sp. SIP3-4]
          Length = 756

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+  ++V +  I  GE ++E  +       S  RG     + D++G+   R + P  V 
Sbjct: 398 EVLAKSLVAARAIRKGEKISEEMINAR----SPGRGLQPSRLNDLLGISACRDMAPGDVF 453

Query: 83  PLSVL 87
             S +
Sbjct: 454 FESDI 458


>gi|258405292|ref|YP_003198034.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM
           5692]
 gi|257797519|gb|ACV68456.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM
           5692]
          Length = 295

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A      VV ++ I+AG  L E  L+  Q    N+          ++G V       +  
Sbjct: 45  APSTQEVVVAALDISAGSQLTEEMLQTGQYLKKNLPPGSFTDPDQLLGRVALAPFKKNEP 104

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
           I    L  P  I  G  V  ++++GN  +S  G
Sbjct: 105 IVDHRL-APTDIKSG-GVSALISKGNRAVSLGG 135


>gi|119025306|ref|YP_909151.1| hypothetical protein BAD_0288 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118764890|dbj|BAF39069.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 266

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           +++        A      VV    +  G  +    ++  +  +     N  H++ D VGL
Sbjct: 66  TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREDVELREAPSDGSLSNAFHTLDDAVGL 125

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108
           + +  +    V+   +     V+ +G     VR+    G +
Sbjct: 126 IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVAGGL 166


>gi|283780138|ref|YP_003370893.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068]
 gi|283438591|gb|ADB17033.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068]
          Length = 328

 Score = 44.1 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%)

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
                    V+ RG  VR+      +T++T+  A++D +IG+VI ++       VS  VV
Sbjct: 250 AKRDARGEIVVKRGESVRVRAIAAGVTVTTSAKAMADGAIGEVIELEVDGHRSRVSARVV 309

Query: 143 DTGTVRV 149
               + +
Sbjct: 310 APQLLEI 316


>gi|295395660|ref|ZP_06805852.1| flp pilus assembly protein CpaB [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971476|gb|EFG47359.1| flp pilus assembly protein CpaB [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 11/128 (8%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
            +   +   +YV ++ S          V    I A + + +  L+   V N  I  +   
Sbjct: 19  AIMVFIAVVVYVQNVSSKVGP-TTEVYVAKEDITAFQPIEQDMLETKTVPNRYITEDMVT 77

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S++ V G      +     I    +     I  G +         ++I+  G A     +
Sbjct: 78  SLEQVAGQKASVKISAGSFIQTDAIEPASSIEDGQR--------EISITFVGDAGVSGRV 129

Query: 123 --GDVIAV 128
             GD + V
Sbjct: 130 SPGDKVDV 137


>gi|160942271|ref|ZP_02089580.1| hypothetical protein CLOBOL_07157 [Clostridium bolteae ATCC
           BAA-613]
 gi|158434828|gb|EDP12595.1| hypothetical protein CLOBOL_07157 [Clostridium bolteae ATCC
           BAA-613]
          Length = 289

 Score = 43.7 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  + +   S     V  +  I  G+ + +  +K ++V   N+  +   
Sbjct: 14  CIVLSLVICFAITPMFNRTISEKTEIVRVTKNIRIGDEITKDMVKPVEVGAYNLPESVVR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           +I +V+G      + P   I  S +             +   +  +++S    A      
Sbjct: 74  NIDEVIGKYASADMAPGDYIIRSKVAEEPAAENAYLYNLNGEKQAISVSVKAFA------ 127

Query: 123 GDVIAVKNIDTGVMVSGSVVD 143
                  N  +G +VSG +V 
Sbjct: 128 -------NGLSGKLVSGDIVS 141


>gi|283769331|ref|ZP_06342230.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219]
 gi|283103988|gb|EFC05372.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219]
          Length = 228

 Score = 43.3 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 40/84 (47%)

Query: 6  FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
           ++F +L+++S  +   +      V S  I A + + E  L+  +V  + +    A +  
Sbjct: 15 TMVFLALFLISSSAGRGAQSTAVYVASKNIKANQQITEDMLEYKKVPGNLVVEGAAKNKD 74

Query: 66 DVVGLVTRRVLLPDHVIPLSVLHR 89
          +++G + +  +L + VI    +++
Sbjct: 75 ELLGKMAKVDILKNSVISKENVYK 98


>gi|169834850|ref|YP_001715940.1| SAF domain-containing protein [Clostridium botulinum A3 str. Loch
          Maree]
 gi|169408957|gb|ACA57367.1| SAF domain family [Clostridium botulinum A3 str. Loch Maree]
          Length = 208

 Score = 43.3 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 35/82 (42%)

Query: 8  LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
          + F   V  +     S      V    IN G+++ E  ++  +++N N+  +   S KD+
Sbjct: 12 ILFLFTVFYIILKNVSGTTKVAVLKNDINKGKIITEQDVETKEISNKNVLPDIVLSPKDI 71

Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89
          VG   +   L +  IP  ++  
Sbjct: 72 VGKSLKVDRLQNDFIPKKIIGD 93


>gi|303233382|ref|ZP_07320051.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4]
 gi|302480511|gb|EFL43602.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4]
          Length = 335

 Score = 43.3 bits (101), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  G+V+  S + +    +     +    ++DVVG   +  L  +  I  +   
Sbjct: 51  VVSTKALRVGDVIEPSDVVKRDWVSMLAPADAYTRMEDVVGKTVKVPLSENAPITQTTFA 110

Query: 89  R 89
            
Sbjct: 111 A 111


>gi|85859140|ref|YP_461342.1| flp pilus assembly protein [Syntrophus aciditrophicus SB]
 gi|85722231|gb|ABC77174.1| flp pilus assembly protein [Syntrophus aciditrophicus SB]
          Length = 295

 Score = 43.3 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 36/108 (33%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           V  L +  +   +        +   VV +  +    VL +  ++       ++   Y   
Sbjct: 20  VTLLAYNWIQKTATAKAKPQEMQKVVVAAFDVPWSTVLTKDMVRTATFLKESLPNGYYLD 79

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
              +VG    + +  +  I  + L    + + G    I  ++  M++ 
Sbjct: 80  PAQIVGRTVIQPIRTNEPITEARLAPTSIRTGGVAAVITPSKRAMSVK 127


>gi|294790464|ref|ZP_06755622.1| SAF domain protein [Scardovia inopinata F0304]
 gi|294458361|gb|EFG26714.1| SAF domain protein [Scardovia inopinata F0304]
          Length = 281

 Score = 43.3 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 18/113 (15%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           ++               +     I+AG  ++ S L       +++ G    S  + VG +
Sbjct: 88  VWSSLQYLAAFQAQASVITAKHSISAGSTIDSSDLVLSFQRTNSLTGTTVRSESEAVGKI 147

Query: 72  TRRVLLPDHVIPLSVLHRPY------------------VISRGAKVRIILTQG 106
            R        I  + L                      ++  G KV +I +  
Sbjct: 148 ARISFNKGDPILPAGLSSAPTYPKDYTTLTISPASTSAILRAGQKVDLISSSP 200


>gi|221195348|ref|ZP_03568403.1| SAF domain protein [Atopobium rimae ATCC 49626]
 gi|221184535|gb|EEE16927.1| SAF domain protein [Atopobium rimae ATCC 49626]
          Length = 262

 Score = 42.9 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 23/72 (31%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           +   +   + + VV +  I AG+ ++ S  +     +         +  D++G      +
Sbjct: 39  VIERYGGEVVNLVVATKPIEAGDTISSSNTQVKSWVSDLAPEGSFTNADDIMGKQVTIPI 98

Query: 77  LPDHVIPLSVLH 88
                +      
Sbjct: 99  SAGTPLTKLNFR 110


>gi|270284475|ref|ZP_05966188.2| putative hemagglutinin-related protein [Bifidobacterium gallicum
           DSM 20093]
 gi|270276969|gb|EFA22823.1| putative hemagglutinin-related protein [Bifidobacterium gallicum
           DSM 20093]
          Length = 257

 Score = 42.9 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 9/111 (8%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG------NYA 61
           +   +YV+    +        VV    I  G V+  + ++  Q   ++  G      + A
Sbjct: 11  VALLVYVVLGAVMGLHATRQVVVARHTIERGSVIGATDVQYQQFPATDSAGSTTPWADAA 70

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMT 109
             ++ V   + +  +    V+ L ++ +  V+  G     V++      +T
Sbjct: 71  DDLQLVSNHIAQFTITAGSVVFLDMVAQQPVLQAGQTIVDVQLASRSQALT 121


>gi|330830433|ref|YP_004393385.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565]
 gi|328805569|gb|AEB50768.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565]
          Length = 296

 Score = 42.9 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNY---AHSIKDVV 68
              +SL    +   +V +  + AG  ++   L+   +  +   N+ G +       K + 
Sbjct: 37  PPAESLAPDRVAQVLVAAHRVQAGSFIHPEDLRWQALPEAEERNLPGLFLFGFTDTKALK 96

Query: 69  GLVTRRVLLPDHVIPLSVLHRP 90
           G +  R L    ++    L RP
Sbjct: 97  GSLVTRTLEAGQIVSADDLVRP 118


>gi|87301557|ref|ZP_01084397.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701]
 gi|87283774|gb|EAQ75728.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701]
          Length = 300

 Score = 42.9 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 18/135 (13%)

Query: 5   RFLLFFSLYVLSLDSLFASVI-GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           R+  F +   L+L           A+VP V +  GE L  + L   Q     +R   A  
Sbjct: 4   RWFNFLATAPLALTLAIGPAASAQALVPYVYVPKGEELEAAGLGIAQAATRLLRLGQADD 63

Query: 64  IKDVVGLVTRRVLLPDHV-----IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI--- 115
              + GL     LLP+       +  + L    + + G     +     +     GI   
Sbjct: 64  AARLAGLTV--QLLPNDPRGWVLLAEAQLRSNQIKAAGQS---LARAKQLDPRNPGIWFA 118

Query: 116 ----ALSDASIGDVI 126
               AL D   G  I
Sbjct: 119 EGSLALRDGQPGQAI 133


>gi|308069314|ref|YP_003870919.1| SAF domain protein [Paenibacillus polymyxa E681]
 gi|305858593|gb|ADM70381.1| SAF domain protein [Paenibacillus polymyxa E681]
          Length = 328

 Score = 42.9 bits (100), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           G AVV    I+ GE +  + LK ++V +S    N      +V G   +  L    V+  +
Sbjct: 65  GWAVV--RDISPGEQIASNDLKGIKVPSSQTPSNLLTDKSEVSGTTAKIELKKGSVLTSA 122

Query: 86  VL 87
           ++
Sbjct: 123 MI 124


>gi|310642358|ref|YP_003947116.1| saf domain protein [Paenibacillus polymyxa SC2]
 gi|309247308|gb|ADO56875.1| SAF domain protein [Paenibacillus polymyxa SC2]
          Length = 325

 Score = 42.5 bits (99), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 9/105 (8%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
            G AVV    I+ GE +  + LK ++V  S    N   +  +V G   +  L    V+  
Sbjct: 64  TGWAVV--RDISPGEQITSNDLKGIKVPGSQAPSNLLANKNEVSGTTAKIELKKGSVLTS 121

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
           ++      I+        L    + +     +L      D I ++
Sbjct: 122 AM------ITANEPTPKDLRNRELKVVVLPSSLKSGDEVD-IRIQ 159


>gi|302387441|ref|YP_003823263.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
 gi|302198069|gb|ADL05640.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
          Length = 277

 Score = 42.5 bits (99), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 9/142 (6%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  L +   +     V  +  I  GE + +  ++ ++V   N+  +   
Sbjct: 14  CIVLSLLICFAITPLFNQSITQKTEIVRVTKPIKIGETITKDMVQTVEVGGYNLPEDVVR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
               V+G      L P   I  S +             +   +  +++S    A      
Sbjct: 74  HTDTVIGKFASADLAPGDYIIASKIADAPAAENAYLYNLTGEKQAISVSVKSFA--AGLS 131

Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144
           G +I      +G +VS  V   
Sbjct: 132 GKLI------SGDIVS-IVAPD 146


>gi|229587502|ref|YP_002860540.1| SAF domain family [Clostridium botulinum Ba4 str. 657]
 gi|229260297|gb|ACQ51334.1| SAF domain family [Clostridium botulinum Ba4 str. 657]
          Length = 208

 Score = 42.5 bits (99), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 4   VRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           ++F +   L++  L  +     S     +V    IN G+++ E  ++  +++N N+  + 
Sbjct: 5   LKFGVIGILFLFVLFYIILKNVSGTTKVIVLKNDINKGKIITEQDVETKEISNKNVLPDI 64

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL 103
             + KD+VG   +   L +  IP  ++    +  +  +V + +
Sbjct: 65  VLNQKDIVGKSLKVDRLQNDFIPKKIIGDTAIKLKSNEVLLTI 107


>gi|67921374|ref|ZP_00514892.1| N-acylneuraminate-9-phosphate synthase [Crocosphaera watsonii WH
           8501]
 gi|67856486|gb|EAM51727.1| N-acylneuraminate-9-phosphate synthase [Crocosphaera watsonii WH
           8501]
          Length = 748

 Score = 42.5 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  GEV+ E+ ++      S  +G   +  K+++G   +R L        S L    + +
Sbjct: 412 LQPGEVITEAMIEVK----SPGKGLQPNRRKELIGKKAKRPLKIGDFFFASDLEEAQITA 467

Query: 95  RG 96
           + 
Sbjct: 468 KN 469


>gi|288561702|ref|YP_003429108.1| SAF domain-containing protein [Bacillus pseudofirmus OF4]
 gi|288548334|gb|ADC52216.1| SAF domain protein [Bacillus pseudofirmus OF4]
          Length = 307

 Score = 42.1 bits (98), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           ++A     A   +  I AGE + E+ L+E+ ++      +      +++G + +  L P 
Sbjct: 56  IWADQQVKAFTANRYIEAGETIEENDLREVLLSAETAAED-ITHYDELLGSIAKVNLEPR 114

Query: 80  HVIPLSVL 87
            V+  S+L
Sbjct: 115 TVLTDSIL 122


>gi|294786498|ref|ZP_06751752.1| LPXTG-motif cell wall anchor domain protein [Parascardovia
           denticolens F0305]
 gi|315226071|ref|ZP_07867859.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
 gi|294485331|gb|EFG32965.1| LPXTG-motif cell wall anchor domain protein [Parascardovia
           denticolens F0305]
 gi|315120203|gb|EFT83335.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
          Length = 274

 Score = 42.1 bits (98), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
           +  +      SL    L  +  +V  +  A V +  I+ G+ ++   + ++++  + +  
Sbjct: 67  LKKIATAFLISLMAFCLIQIGLTVSSNQSAFVAARDISQGQEIHPGDIAQVRMRTNPLAT 126

Query: 59  NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
               S   V+G      L     +  + +   
Sbjct: 127 RTVKSASAVLGRRAAIPLRKGDPLVPTAVKAA 158


>gi|303248301|ref|ZP_07334563.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ]
 gi|302490326|gb|EFL50238.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ]
          Length = 304

 Score = 42.1 bits (98), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V +  I  G  L+ + L+        + G    ++ +  G V  R +  D  I    
Sbjct: 47  DVLVAARAIPKGARLDAAMLRLKPYEAEAVPGGALRAVAEAEGRVAARDISKDDPITPDK 106

Query: 87  LHRPYVISRG 96
           L     ++RG
Sbjct: 107 L-MAKGVTRG 115


>gi|289178132|gb|ADC85378.1| hypothetical protein BIF_01377 [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 223

 Score = 41.8 bits (97), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           +L+        A+    AVV +  ++AG V+    ++ +++ + +   +      D VGL
Sbjct: 48  ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 107

Query: 71  VTRRVLLPDHVIPLSVLHR 89
           VT+  +    ++  + +  
Sbjct: 108 VTQTRIEKGDILLTTDVGE 126


>gi|227487790|ref|ZP_03918106.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542431|ref|ZP_03972480.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092292|gb|EEI27604.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181629|gb|EEI62601.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 20/125 (16%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           +R +   SL +L+            V  S  ++AGE L  S      V  S I  N    
Sbjct: 15  LRRIAAVSLVILAATLSLTRKDPTVVTLSRTVSAGETLAPSDFSRTSVPQSLIPDNAVTD 74

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVL-----------------HRPY---VISRGAKVRIIL 103
                G V    L    ++  +                     P    ++  G  V I+ 
Sbjct: 75  DTAAHGNVAVTTLSRGQILTSTSYTGEGITPAGLTSVPLRLADPATSELLKHGDSVTIVA 134

Query: 104 TQGNM 108
             G++
Sbjct: 135 GDGSI 139


>gi|330719628|gb|EGG98196.1| hypothetical protein imdm_386 [gamma proteobacterium IMCC2047]
          Length = 44

 Score = 41.8 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           M++ + GIA+++  +G  I VKN  +  +++  VV++  V VV+
Sbjct: 1   MSVKSPGIAINNGRVGQQIQVKNKSSKRVITARVVNSRLVEVVM 44


>gi|219682833|ref|YP_002469216.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis
          AD011]
 gi|219620483|gb|ACL28640.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis
          AD011]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
          +L+        A+    AVV +  ++AG V+    ++ +++ + +   +      D VGL
Sbjct: 17 ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 76

Query: 71 VTRRVLLPDHVIPLSVLHR 89
          VT+  +    ++  + +  
Sbjct: 77 VTQTRIEKGDILLTTDVGE 95


>gi|322378357|ref|ZP_08052813.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           suis HS1]
 gi|321149214|gb|EFX43658.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           suis HS1]
          Length = 221

 Score = 41.4 bits (96), Expect = 0.038,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
             ++   + L+ S      +  ++           +     R  + P  ++ +  +    
Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHF-NTLPIDASYINNSSARSFIAPHTILSIDRVGPKI 162

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
           +I +       L +G + + T+  AL +  +  VI   N+ +  +V   +     G V
Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220


>gi|322380927|ref|ZP_08054998.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           suis HS5]
 gi|321146650|gb|EFX41479.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           suis HS5]
          Length = 221

 Score = 41.4 bits (96), Expect = 0.038,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
             ++   + L+ S      +  ++           +     R  + P  ++ +  +    
Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHF-NTLPIDASYINNSSARSFIAPHTILSIDRVGPKI 162

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
           +I +       L +G + + T+  AL +  +  VI   N+ +  +V   +     G V
Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220


>gi|116671247|ref|YP_832180.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24]
 gi|116611356|gb|ABK04080.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24]
          Length = 214

 Score = 41.4 bits (96), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 8/120 (6%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VG 69
           S+  +      A            I  GE L    +  ++V   ++ G+Y  +   +  G
Sbjct: 32  SVAGVVSLVGAADQTTEVYAAKGPIAVGERLTAENVNRVKVRLGDVEGHYVTAEAGLPDG 91

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG------IALSDASIG 123
           +V  + + PD ++P   L +P  ++R   V I + +       AG      +AL DA  G
Sbjct: 92  MVAVQRIGPDQLVPRDSLGKPDALNR-KPVAITIDEALPEQVAAGSRVDAWVALPDARNG 150


>gi|309811232|ref|ZP_07705024.1| SAF domain protein [Dermacoccus sp. Ellin185]
 gi|308434844|gb|EFP58684.1| SAF domain protein [Dermacoccus sp. Ellin185]
          Length = 760

 Score = 41.4 bits (96), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I AGE L  + +       S  RG   + ++ +VG   RR +        
Sbjct: 404 LAKSLVATRDIAAGEKLTRADVTIK----SPGRGLQPNRLEALVGRTMRRPIESGDFFYA 459

Query: 85  SVLHRPYV 92
           + L     
Sbjct: 460 TDLTDAVA 467


>gi|156744073|ref|YP_001434202.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235401|gb|ABU60184.1| SAF domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 267

 Score = 41.4 bits (96), Expect = 0.042,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 19/71 (26%), Gaps = 4/71 (5%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V +  +  G  +    +       + +  N       +   +  R +        S+   
Sbjct: 65  VAARPLAPGNTIGPDDILLKDYPVNLVPVNALTDTTQIENRILARTVGQGDPFQKSMF-- 122

Query: 90  PYVISRGAKVR 100
             V  RG  + 
Sbjct: 123 --VGERGESIS 131


>gi|225872753|ref|YP_002754210.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791215|gb|ACO31305.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum
           ATCC 51196]
          Length = 271

 Score = 41.4 bits (96), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 21/130 (16%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  I  GEV+  + +K +    +        + KDV+G      +     I  + L  P
Sbjct: 43  AARPIAVGEVIQAADVKTILWPANLPLQGGMATTKDVIGRAAIFPVTVGQPILSTDLAAP 102

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSD------ASI---GDVIAV----KNIDTGVMV 137
                G+ + I     N       IAL              G  + V    +N  +   +
Sbjct: 103 -----GSSLGITTRIPN---GMRAIALHTDDVIAVGGFIFPGSHVDVLVTYRNPGSPQPI 154

Query: 138 SGSVVDTGTV 147
           + +V+    V
Sbjct: 155 TATVLQNALV 164


>gi|300743849|ref|ZP_07072869.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia
           dentocariosa M567]
 gi|300380210|gb|EFJ76773.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia
           dentocariosa M567]
          Length = 747

 Score = 41.4 bits (96), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I  GEV+ E+ +       S  RG   + +  ++G   +R +        
Sbjct: 401 LAKSLVATRSIAKGEVITEADVTVK----SPGRGLQPNYLPQLLGRTIQRDVEEGSFFFE 456

Query: 85  SVLHRPYVISRG 96
             L    V  R 
Sbjct: 457 GDLKDDLVTRRN 468


>gi|283797119|ref|ZP_06346272.1| Flp pilus assembly protein CpaB [Clostridium sp. M62/1]
 gi|291075536|gb|EFE12900.1| Flp pilus assembly protein CpaB [Clostridium sp. M62/1]
          Length = 280

 Score = 41.4 bits (96), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V     I  GE +    +K ++V   N+  +   
Sbjct: 14  CIVLSLIICFAVTPLFNKAISDKTEIVRVVKEIRTGEEITADMVKTVEVGAYNLPEDVVR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           S + VVG      ++P   I  S +             +   +  +++S    A  +   
Sbjct: 74  STETVVGKFASADMVPGDYIIASKIAEEPAAENAYLYSLTGEKQAISVSVKSFA--NGLS 131

Query: 123 GDVIAVKNIDTGVMVS 138
           G       + +G +VS
Sbjct: 132 GK------LQSGDIVS 141


>gi|332710335|ref|ZP_08430283.1| N-acetylneuraminate synthase [Lyngbya majuscula 3L]
 gi|332350884|gb|EGJ30476.1| N-acetylneuraminate synthase [Lyngbya majuscula 3L]
          Length = 755

 Score = 41.4 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  ++V +  +  G+V+    ++      S  +G   +   +++G + RR        
Sbjct: 400 ETLAKSLVINCNLEPGQVITSEMIEVK----SPGKGLQPNRKTELIGQLARRRFKAGDFF 455

Query: 83  PLSVLHRPYVISRG 96
             S L R  + +R 
Sbjct: 456 FPSDLEREQIQARN 469


>gi|117928960|ref|YP_873511.1| hypothetical protein Acel_1753 [Acidothermus cellulolyticus 11B]
 gi|117649423|gb|ABK53525.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
          Length = 236

 Score = 41.4 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 4/97 (4%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
            L+  S+   +     A         +  +  G  L+ S L  ++V   +    Y     
Sbjct: 38  LLIVVSIAAGAKILDSARHYDTVWAAARDLAPGTTLSHSDLTPVKVRFRDHGARYVAGGS 97

Query: 66  DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
           D+ G    R +    +IP S +        G  VR++
Sbjct: 98  DLAGWTVTRPVPAGELIPRSAVSE----RAGTPVRLV 130


>gi|172039394|ref|YP_001805895.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. ATCC 51142]
 gi|171700848|gb|ACB53829.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. ATCC 51142]
          Length = 749

 Score = 41.0 bits (95), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
           +  G+V+ E+ ++      S  +G   +  K+++G   +R L        S L    +
Sbjct: 412 LEPGQVITEAMIEVK----SPGKGLQPNRKKELIGKTAKRSLKAGDFFFSSDLEEAQI 465


>gi|283852072|ref|ZP_06369346.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B]
 gi|283572462|gb|EFC20448.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B]
          Length = 300

 Score = 41.0 bits (95), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
            +V +  +  G  L+ + ++                  +VVG VT R +  D  I  
Sbjct: 48  VLVAARPLAKGARLDTTMVRLKPYDPEAAPLGAMRDASEVVGRVTAREISQDDPITP 104


>gi|253576735|ref|ZP_04854062.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843945|gb|EES71966.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 318

 Score = 41.0 bits (95), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 29/64 (45%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP+  I AG  +  S LK +++  +++  +   S + + G   +  L     +  ++++ 
Sbjct: 68  VPTRDIPAGNRIAASDLKRVELPANSVPADLFKSQEAIAGKYAKIALRSMTPLTEALVYE 127

Query: 90  PYVI 93
              +
Sbjct: 128 EAPV 131


>gi|183601919|ref|ZP_02963288.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|241190409|ref|YP_002967803.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp.
          lactis Bl-04]
 gi|241195815|ref|YP_002969370.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp.
          lactis DSM 10140]
 gi|183218804|gb|EDT89446.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|240248801|gb|ACS45741.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp.
          lactis Bl-04]
 gi|240250369|gb|ACS47308.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp.
          lactis DSM 10140]
 gi|295793396|gb|ADG32931.1| hypothetical protein BalV_0343 [Bifidobacterium animalis subsp.
          lactis V9]
          Length = 185

 Score = 41.0 bits (95), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
          +L+        A+    AVV +  ++AG V+    ++ +++ + +   +      D VGL
Sbjct: 10 ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 69

Query: 71 VTRRVLLPDHVIPLSVLHR 89
          VT+  +    ++  + +  
Sbjct: 70 VTQTRIEKGDILLTTDVGE 88


>gi|226307879|ref|YP_002767839.1| hypothetical protein RER_43920 [Rhodococcus erythropolis PR4]
 gi|226186996|dbj|BAH35100.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 248

 Score = 41.0 bits (95), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV S  +  G+V+ +S ++  ++ +  +          VVG      +     +    +
Sbjct: 71  VVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGETVTDVRV 130

Query: 88  HRPYV 92
             P +
Sbjct: 131 LSPRL 135


>gi|220930147|ref|YP_002507056.1| SAF domain protein [Clostridium cellulolyticum H10]
 gi|220000475|gb|ACL77076.1| SAF domain protein [Clostridium cellulolyticum H10]
          Length = 294

 Score = 41.0 bits (95), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V  S  I AG+ +  + ++ ++V + N+      
Sbjct: 14  CILLSLVICFAVTPLFNSSISQRTKIVRVSRDIKAGDKITGNMVQIVEVGSYNLPSGVIK 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAGI 115
           +  D +G      +     I  + L               G K  + +T G+     +G 
Sbjct: 74  NKDDAIGKYASADMKTGDYIFNTKLSAAPAAENSYLYSLNGEKQAMSVTVGSFASGLSGK 133

Query: 116 ALSDASIGDVIAV 128
            +S    GD+++V
Sbjct: 134 LMS----GDIVSV 142


>gi|149189201|ref|ZP_01867488.1| sialic acid synthase [Vibrio shilonii AK1]
 gi|148836955|gb|EDL53905.1| sialic acid synthase [Vibrio shilonii AK1]
          Length = 751

 Score = 41.0 bits (95), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  +VV  V I  G+V+ E  L       S  +G   + + ++V  V  R +  +  +
Sbjct: 400 ETLAKSVVADVNIKKGDVITEEMLAIK----SPGKGLAPYKLSELVNRVAVRDIPKNDFL 455

Query: 83  PLSVLHRPYV 92
             S +    V
Sbjct: 456 YQSDIDGNVV 465


>gi|303325648|ref|ZP_07356091.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863564|gb|EFL86495.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 353

 Score = 41.0 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V +  + AG+ L  + L   +  +     NY     +V+GL  RR L  D V+  + 
Sbjct: 294 RSLVTTRAVPAGQALTPADLTWKRPAHGISPRNY----DEVLGLRARRDLPEDTVLTWAD 349

Query: 87  LHRP 90
           L R 
Sbjct: 350 LDRA 353


>gi|167036494|ref|YP_001664072.1| SAF domain-containing protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320114922|ref|YP_004185081.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166855328|gb|ABY93736.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928013|gb|ADV78698.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 180

 Score = 40.6 bits (94), Expect = 0.063,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
               VV    I AG V+++  +K   V  S +R NYA S+ DV+G V +   +    IP+
Sbjct: 29  TEKVVVVEKDIPAGTVISQDAVKVTDVPASVVRPNYAKSLADVIGKVVKEGRVQGDFIPV 88

Query: 85  SVL--HRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
            +L      ++  G  V + +    +   T    L   
Sbjct: 89  EILTSQDEKLLEAG-HVIMTIQIDKVEAKT----LQSG 121


>gi|167772246|ref|ZP_02444299.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM
           17241]
 gi|167665349|gb|EDS09479.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM
           17241]
          Length = 281

 Score = 40.6 bits (94), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 3/129 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  L +   S     V     I AG+ + ES ++ ++V   N+  +   
Sbjct: 14  CIMLSLLICFGLTPLFNQSLSQKAEIVRVVQPIRAGDEITESMVQTVEVGGYNLPEDVLR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121
             +  VG      L     I  S L             +  +Q  +++S    A      
Sbjct: 74  QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSIKSFAEGLSGK 133

Query: 122 I--GDVIAV 128
           +  GD+++V
Sbjct: 134 LQSGDIVSV 142


>gi|254421375|ref|ZP_05035093.1| NeuB family [Synechococcus sp. PCC 7335]
 gi|196188864|gb|EDX83828.1| NeuB family [Synechococcus sp. PCC 7335]
          Length = 749

 Score = 40.6 bits (94), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  ++V    +  G+V+    +       S  +G   +   +++GL  +R +      
Sbjct: 400 ETLAKSLVTKCDLAPGDVITAEMIDVR----SPGQGLQPNRKAELIGLRIKRSIQAGDFF 455

Query: 83  PLSVLHRPYVISR 95
             S LH   V +R
Sbjct: 456 FPSDLHSEQVQAR 468


>gi|170725114|ref|YP_001759140.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908]
 gi|169810461|gb|ACA85045.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908]
          Length = 298

 Score = 40.6 bits (94), Expect = 0.065,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
           +   VV +  +  G++++E+ +   ++    +  +  H      +VG +    + P   +
Sbjct: 49  MAQVVVATQELRKGDIISEANMSVRKIQADTLPLDAIHPKDFNQIVGQMLLEPMSPGRPL 108


>gi|226325180|ref|ZP_03800698.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758]
 gi|225206528|gb|EEG88882.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758]
          Length = 497

 Score = 40.6 bits (94), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKD----VVGLVTRRVL 76
           S     V  +  I+AG+ ++ S L  + V NS +         I D     VG V  + +
Sbjct: 310 SGTTEVVAATKTIHAGDEISASDLAFVSVPNSTVADGAITKKDIDDSSKTPVGRVATQYI 369

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASIGDVIAV 128
                +  +         +     +    G  M   T  +      +G ++ V
Sbjct: 370 AKGSQLTNASTA-----GKDNPESLAAAIGDGMEAVTISVDAQSG-MGGMLRV 416


>gi|126660335|ref|ZP_01731448.1| Sialic acid synthase [Cyanothece sp. CCY0110]
 gi|126618366|gb|EAZ89122.1| Sialic acid synthase [Cyanothece sp. CCY0110]
          Length = 752

 Score = 40.6 bits (94), Expect = 0.069,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           +  G+++ E+ ++      S  +G   +  K+++G   +R          S L    + +
Sbjct: 412 LEPGQIITEAMIEIK----SPGKGLQPNRKKELIGKTAKRPFKVGDFFFPSDLEEAQITA 467

Query: 95  RG 96
           + 
Sbjct: 468 KN 469


>gi|163840497|ref|YP_001624902.1| hypothetical protein RSal33209_1753 [Renibacterium salmoninarum
           ATCC 33209]
 gi|162953973|gb|ABY23488.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 227

 Score = 40.6 bits (94), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  A+  S  + AG  ++ S +  ++V  + I           +G      L    ++  
Sbjct: 51  VETALAASKDLPAGSTISASDMVLLKVPLAAIPQAALARPSQAIGQQLAGALRKGQILTD 110

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT-GVMVSGSV 141
           + L    +++ G     +     + +S AG A    + G ++ V   N D+ G   +G+V
Sbjct: 111 TSLLGQSLLT-GTPAGSVAV--PLRLSDAGTA-KLVAPGQLVTVVLTNEDSTGRAENGTV 166

Query: 142 VD 143
           + 
Sbjct: 167 LA 168


>gi|134298817|ref|YP_001112313.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1]
 gi|134051517|gb|ABO49488.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1]
          Length = 232

 Score = 40.6 bits (94), Expect = 0.078,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           VP+ VI AG V+    +   +   +           ++ G V    L P   I    L  
Sbjct: 48  VPAHVIYAGHVITPGDITIRKFLKAAQEPTSIQDTTEITGRVAASDLYPMEQIRADKLVP 107

Query: 90  PYVISRGAKVRIILTQGNMTISTAGIALSDASIG--DVIAVKN----IDTGVMVSGSVVD 143
           P  I    +  + +   ++     G    +  +    V+ ++N    +    +VSG V  
Sbjct: 108 PENILNTGEAYVSIKADSLEQILGGQIQPNMQVDVYHVVDLENAPVLLAKSAIVSGIVGA 167

Query: 144 TGTV 147
           +G+V
Sbjct: 168 SGSV 171


>gi|326388865|ref|ZP_08210447.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206465|gb|EGD57300.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370]
          Length = 347

 Score = 40.6 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 10/102 (9%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
             +V    +  G ++    +         ++  Y       ++ ++G V R  +     I
Sbjct: 46  KVLVAQRALPVGTIITADAVSYQAWPKDLVQDAYFLQDKTDMQKLLGTVVRNPITAGQPI 105

Query: 83  PLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASIG 123
               L  P     G +  +    G  M   T  ++      G
Sbjct: 106 TTGSLVAP-----GDRGFLAAALGPGMRAVTIPVSTRTGVAG 142


>gi|324990782|gb|EGC22717.1| pyruvate phosphate dikinase [Streptococcus sanguinis SK353]
          Length = 873

 Score = 40.6 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D+ G+V  + ++        +     V++RG     +   G +TIS    A+S  S
Sbjct: 428 TSPEDIEGMVVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEESKAVSCGS 484

Query: 122 I----GDVIAVKNIDTGVMVSGSV 141
           +    GDVI+V +  +G + SG +
Sbjct: 485 LVLTEGDVISV-DGSSGRIYSGEI 507


>gi|117619605|ref|YP_855990.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561012|gb|ABK37960.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 296

 Score = 40.2 bits (93), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNY---AHSIKDVVG 69
           + +   ++ +   +V +  + AG  ++   L    +  +   N+ G +       K + G
Sbjct: 38  APEPAASARLAQVLVAAHRVQAGAFIHPEDLVWQTLPAAEEMNLPGLFLFGFTDTKALKG 97

Query: 70  LVTRRVLLPDHVIPLSVLHRP 90
            +  R L    ++    L RP
Sbjct: 98  SLVTRTLEAGQIVSADDLVRP 118


>gi|218886984|ref|YP_002436305.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757938|gb|ACL08837.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 354

 Score = 40.2 bits (93), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V +  I AG V+    L   +       G     I  V+G   R  +  D V+  S 
Sbjct: 297 RSLVAARPIAAGAVITRDDLTWKR----PAHGVSPREIDAVLGKRARADIAEDTVLQWSH 352

Query: 87  LH 88
           L 
Sbjct: 353 LE 354


>gi|220905152|ref|YP_002480464.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869451|gb|ACL49786.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score = 40.2 bits (93), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           SL  L  +         ++V +  I AG  +  + L   +  +     NY     +V+G+
Sbjct: 278 SLRALPEEEPARQHARRSLVTARAIPAGTPVTAADLTWKRPAHGISPRNY----DEVLGM 333

Query: 71  VTRRVLLPDHVIPLSVLH 88
             R  L  D V+  S L 
Sbjct: 334 RARHDLAEDTVLHWSDLE 351


>gi|319653978|ref|ZP_08008071.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2]
 gi|317394300|gb|EFV75045.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2]
          Length = 221

 Score = 40.2 bits (93), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             ++    LD   +      V+   VI    V+    +   Q+ N  +      ++ DVV
Sbjct: 20  MGAVAANELDLFKSLTTTQVVMAKDVIEKDTVITNENVWIFQMPNELVTDEMYRNVNDVV 79

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYV 92
           G    +V+LP   +    L +  +
Sbjct: 80  GKTATQVILPSQYVSAKALDQSLL 103


>gi|302335340|ref|YP_003800547.1| SAF domain protein [Olsenella uli DSM 7084]
 gi|301319180|gb|ADK67667.1| SAF domain protein [Olsenella uli DSM 7084]
          Length = 229

 Score = 40.2 bits (93), Expect = 0.095,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 25/72 (34%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            + +   +   VV    +  G+V++++ + E          +   S+ DVVG      + 
Sbjct: 40  IARYGGEVVRLVVSRGPLEPGDVVDQADVSERDWVTDLAPSDALTSLDDVVGREVTVPVA 99

Query: 78  PDHVIPLSVLHR 89
            +  +       
Sbjct: 100 ANAPVTALAFRD 111


>gi|295396211|ref|ZP_06806393.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
          49030]
 gi|294970999|gb|EFG46892.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
          49030]
          Length = 173

 Score = 39.8 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 18/61 (29%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            VV    I+ G V+    +         I  N       VVG  +   L     +  + 
Sbjct: 11 RIVVAHTRIDPGTVITARLVTTRVFPPQLIPENAVTDPAQVVGTTSASSLDAGTPVTTTA 70

Query: 87 L 87
          L
Sbjct: 71 L 71


>gi|148657460|ref|YP_001277665.1| SAF domain-containing protein [Roseiflexus sp. RS-1]
 gi|148569570|gb|ABQ91715.1| SAF domain [Roseiflexus sp. RS-1]
          Length = 260

 Score = 39.8 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 18/71 (25%), Gaps = 4/71 (5%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V +  +  G  +    +         +  N       +   V  R +        S+   
Sbjct: 58  VAARSLTPGNAIGPDDILLKDFPVDLVPVNALTETTQIESRVLARAVGQGDPFQRSMF-- 115

Query: 90  PYVISRGAKVR 100
             V  RG  V 
Sbjct: 116 --VGERGESVS 124


>gi|153956473|ref|YP_001397238.1| hypothetical protein CKL_3890 [Clostridium kluyveri DSM 555]
 gi|219856777|ref|YP_002473899.1| hypothetical protein CKR_3434 [Clostridium kluyveri NBRC 12016]
 gi|146349331|gb|EDK35867.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570501|dbj|BAH08485.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 276

 Score = 39.8 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 9/142 (6%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V  +  I  GE + +  ++ ++V   N+  +   
Sbjct: 14  CIVLSLLICFAVTPLFNQSISQKTEIVRVTKPIKIGEAITKDMVQTVEVGGYNLPEDVVR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
               V+G      L+P   I  S +             +   +  +++S    A      
Sbjct: 74  HTDTVIGKFASADLVPGDYIIASKIADTPAAENAYLYNLTGKKQAISVSVKSFA--AGLS 131

Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144
           G +I      +G +VS  V   
Sbjct: 132 GKLI------SGDIVS-IVAPD 146


>gi|220910291|ref|YP_002485602.1| N-acetylneuraminate synthase [Cyanothece sp. PCC 7425]
 gi|219866902|gb|ACL47241.1| N-acetylneuraminate synthase [Cyanothece sp. PCC 7425]
          Length = 748

 Score = 39.8 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 12/84 (14%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  +  G+V+    +       S  RG   +   +++GL  +R          
Sbjct: 402 LAKSLVINCDLQPGQVITAEMIDVK----SPGRGLQPNRKVELIGLKAKRPFKAGDFFFP 457

Query: 85  SVLH------RPYVISR--GAKVR 100
           S L       RPY   R  G  VR
Sbjct: 458 SDLEYEKVQARPYKFKRPWGLPVR 481


>gi|332982946|ref|YP_004464387.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON]
 gi|332700624|gb|AEE97565.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON]
          Length = 332

 Score = 39.8 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%)

Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                VV +  IN    +    +    +  S + G+       V+G +T    +P  +I
Sbjct: 27 EGTKQVVVVTKEINDTMEITSDMITVKALPVSAVPGDVLTDPNAVIGKMTTVGRIPGDLI 86

Query: 83 PLSVLHRP 90
          P S+L +P
Sbjct: 87 PKSILAKP 94


>gi|256826164|ref|YP_003150124.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547]
 gi|256689557|gb|ACV07359.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547]
          Length = 218

 Score = 39.8 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
              V    +V    I  G  L    L+ +++       + A S++++ G      L P  
Sbjct: 50  APPVTTEVLVADAEIAPGTTLTAEHLRTIELPEGAAAWD-AGSVEELTGRTVTIPLAPGD 108

Query: 81  VIPLSVL 87
            +    +
Sbjct: 109 PVTPRSV 115


>gi|254478346|ref|ZP_05091725.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035704|gb|EEB76399.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 181

 Score = 39.8 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV    I AG V++E  +K + V  S +R  YA S+ DVVG V +   +    IP
Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKIIDVPASAVRPEYARSLTDVVGKVVKEGRVRGDFIP 87


>gi|51245388|ref|YP_065272.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54]
 gi|50876425|emb|CAG36265.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54]
          Length = 285

 Score = 39.8 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 26/90 (28%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
                   V    ++ G  +    ++        +   +   ++ VVG +    L     
Sbjct: 40  GQATTDIAVAVKDMSRGSKIGSEDVQMATYLQETLPSGHFTDLEQVVGRIVLSPLTTTEP 99

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
           I  S L    +   G    I  T+  M I 
Sbjct: 100 ILNSDLAPQDLTKGGLAAVITPTKRAMAIK 129


>gi|225017400|ref|ZP_03706592.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum
           DSM 5476]
 gi|224949810|gb|EEG31019.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum
           DSM 5476]
          Length = 290

 Score = 39.8 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 12/132 (9%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           C+   +     +  L +        AV V + VI  G  +    ++      S +  + A
Sbjct: 16  CILLAVLVCFGITPLFNAGLKAQTEAVRVKAEVIPRGTYITADMVEVYTRGASGMPDSIA 75

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAG 114
            S+ +VVG  T   L  +  +    L    +          G+KV I +T        +G
Sbjct: 76  TSLDEVVGRYTDVELRKNTDVNTGWLSSEPLTQYEYLTKLDGSKVAISVTIPTFAKGGSG 135

Query: 115 IALSDASIGDVI 126
                   GD+I
Sbjct: 136 KV----EAGDII 143


>gi|325067747|ref|ZP_08126420.1| hypothetical protein AoriK_07996 [Actinomyces oris K20]
          Length = 250

 Score = 39.8 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 9/101 (8%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            +V S  I+AG VL E  +    +    +  +   S    VG      L    V+  S+ 
Sbjct: 16  VLVASRSISAGAVLTEQDVSISNLPAGALPQSPLTSAGQAVGSRAAISLEKGTVLTASMT 75

Query: 88  ---------HRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
                        ++     V   L +    +   G A  D
Sbjct: 76  SGYLAQQLGDDERLVQVPVDVGAELARPGARVDIIGQASED 116


>gi|296122068|ref|YP_003629846.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776]
 gi|296014408|gb|ADG67647.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776]
          Length = 334

 Score = 39.8 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 23  SVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
            VI    VP  +  I  G ++ E  +    V NS ++ +   + + +VG V R  +    
Sbjct: 37  PVIATRNVPMAISDIEPGTLITEGHIGLGPVQNSQLKPDMLLANRVIVGRVARTKIRAAE 96

Query: 81  VIPLSVLHRP 90
            I    L++P
Sbjct: 97  PIRAGQLYQP 106


>gi|209527045|ref|ZP_03275561.1| N-acylneuraminate-9-phosphate synthase [Arthrospira maxima CS-328]
 gi|209492556|gb|EDZ92895.1| N-acylneuraminate-9-phosphate synthase [Arthrospira maxima CS-328]
          Length = 749

 Score = 39.8 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I  G+++    ++      S  +G   + I D++G V  R ++P      
Sbjct: 402 LAKSLVTNQSIKKGQIIKREMIEVK----SPGQGLQPNRIHDLLGKVASRDMMPGDFFFE 457

Query: 85  SVLHRPYVISRGA 97
           S + +   I +  
Sbjct: 458 SDIVQ-KAIKKSE 469


>gi|320161465|ref|YP_004174689.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1]
 gi|319995318|dbj|BAJ64089.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1]
          Length = 376

 Score = 39.8 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           +   V+    I+ G   NE+ +  +     ++  G +   I++V+G   +  +     I 
Sbjct: 55  MTSIVISVQPISRGLEFNETNVTTIPYPKKDLVEGAFITDIQEVLGKRAKFDIEARTPIT 114

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           +++L  P   ++ +     +  G + I+     LS  + G
Sbjct: 115 MTMLVDPT--TKNSPAAFQIPPGQVAITIPVSKLSSVAYG 152


>gi|257791505|ref|YP_003182111.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
 gi|257475402|gb|ACV55722.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
          Length = 243

 Score = 39.5 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V+ +  I+ G  ++   LK + +  S +        +D+VG +    +  +  +   +L 
Sbjct: 77  VITTTAISQGTTISPDMLKVVDIPASFLNSEAIADTQDLVGKIALYNIAANSQVTSGMLS 136

Query: 89  R 89
            
Sbjct: 137 A 137


>gi|118443277|ref|YP_877857.1| sialic acid synthase [Clostridium novyi NT]
 gi|118133733|gb|ABK60777.1| Sialic acid synthase [Clostridium novyi NT]
          Length = 352

 Score = 39.5 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
             V   ++V S  I  GE++ E  L   +   + ++  Y    KD++G    + +  D  
Sbjct: 289 MKVARKSIVASKYIRKGEIITEEHLDYKR-PGTGLKPKYY---KDIIGKKASKDIEADMQ 344

Query: 82  IPLSVLHR 89
           I   ++ R
Sbjct: 345 ITFDLVER 352


>gi|242003723|ref|XP_002422836.1| Sialic acid synthase, putative [Pediculus humanus corporis]
 gi|212505706|gb|EEB10098.1| Sialic acid synthase, putative [Pediculus humanus corporis]
          Length = 376

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G  VV +  +  G+V+    +         I GNY H+   ++G    + +  D  I  
Sbjct: 316 LGKTVVAAKPLKKGDVITWDNVSLKVAEPKGIPGNYLHN---IIGKTINKTVDEDESILE 372

Query: 85  SVL 87
           +  
Sbjct: 373 NFF 375


>gi|167769285|ref|ZP_02441338.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM
           17241]
 gi|167668253|gb|EDS12383.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM
           17241]
          Length = 281

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 3/129 (2%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  L +   S     V     I AG+ + ES ++ ++V   N+  +   
Sbjct: 14  CILLSLLICFGLTPLFNQSVSQKAEIVRVVQPIRAGDEITESMVQIVEVGGYNLPEDVLR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121
             +  VG      L     I  S L             +  +Q  +++S    A      
Sbjct: 74  QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSIKSFAEGLSGK 133

Query: 122 I--GDVIAV 128
           +  GD+++V
Sbjct: 134 LQSGDIVSV 142


>gi|154486709|ref|ZP_02028116.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis
           L2-32]
 gi|154084572|gb|EDN83617.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis
           L2-32]
          Length = 206

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 3/101 (2%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           +++        A      VV    +  G  +    ++  +  +     N  H++ D VGL
Sbjct: 6   TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREAVELREAPSDGSLSNAFHTLDDAVGL 65

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108
           + +  +    V+   +     V+ +G     VR+      +
Sbjct: 66  IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVADGL 106


>gi|154509492|ref|ZP_02045134.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC
          17982]
 gi|153799126|gb|EDN81546.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC
          17982]
          Length = 194

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 7  LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
          L+  S+   S  S            +  I  GE L    ++E  V  S     Y  + + 
Sbjct: 11 LIIASVIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVRE--VVLSVDSDVYVPTSEA 68

Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89
           +G V  R + P  ++  + L +
Sbjct: 69 PMGSVATRQITPGQIVMRTDLSQ 91


>gi|311113094|ref|YP_003984316.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC
           17931]
 gi|310944588|gb|ADP40882.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC
           17931]
          Length = 747

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I  GEV+ E+ +       S  RG   + +  ++G   +R +        
Sbjct: 401 LAKSLVATRGIAKGEVITEADVTVK----SPGRGLQPNYLPQLLGRTIQRDVEEGSFFFE 456

Query: 85  SVLHRPYVISRGA 97
             L    +++R  
Sbjct: 457 GDLKD-DLVTRRD 468


>gi|167763885|ref|ZP_02436012.1| hypothetical protein BACSTE_02266 [Bacteroides stercoris ATCC
           43183]
 gi|167698001|gb|EDS14580.1| hypothetical protein BACSTE_02266 [Bacteroides stercoris ATCC
           43183]
          Length = 347

 Score = 39.5 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           LY+    S     +  ++  +  ++ G+++ E  +       S   G        VVG  
Sbjct: 274 LYIDPAVSAAKVKLERSIATNKALHPGDIITEEDIHL----LSPGDGFKWAERDKVVGRR 329

Query: 72  TRRVLLPDHVIPLSVLHR 89
            R+ +  + +I  S++  
Sbjct: 330 VRKEIPRNEIIYPSLIEE 347


>gi|323497096|ref|ZP_08102119.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326]
 gi|323317940|gb|EGA70928.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326]
          Length = 343

 Score = 39.5 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  +VV +  ++ G+VL  + +   +         Y    + V+G V  + +  D VI L
Sbjct: 284 MRRSVVSARQLSKGDVLTLTDIVLKRPGTGVPADRY----ESVIGKVVTQDIAADQVIDL 339

Query: 85  SVLH 88
           S L 
Sbjct: 340 SALK 343


>gi|332970970|gb|EGK09944.1| hypothetical protein HMPREF9374_2747 [Desmospora sp. 8437]
          Length = 245

 Score = 39.5 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 28/83 (33%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
                 V    I + E+L     +  ++ +  +  +      ++ G V+   L     + 
Sbjct: 39  APTTVYVAKQEIASREILRPEFFEAKEIPSKYVTSSMVTDPAEIDGQVSVVPLGKGDQLT 98

Query: 84  LSVLHRPYVISRGAKVRIILTQG 106
            S+L     ++ G    ++L   
Sbjct: 99  KSMLKPARQLNDGESRMVLLRTS 121


>gi|332305652|ref|YP_004433503.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172981|gb|AEE22235.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 753

 Score = 39.5 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +G +V+  V I  GE +    L         +   Y      ++G+   R +  +   
Sbjct: 400 ESLGKSVIADVSIAKGEKITRKMLAVKS-PGKGLAPYYL---DKLIGMQANRDIDKNDFF 455

Query: 83  PLSVLHR-PYVISR 95
             S     P V +R
Sbjct: 456 YHSDYSNLPKVAAR 469


>gi|167039378|ref|YP_001662363.1| SAF domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914019|ref|ZP_07131336.1| SAF domain protein [Thermoanaerobacter sp. X561]
 gi|307725296|ref|YP_003905047.1| SAF domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166853618|gb|ABY92027.1| SAF domain [Thermoanaerobacter sp. X514]
 gi|300890704|gb|EFK85849.1| SAF domain protein [Thermoanaerobacter sp. X561]
 gi|307582357|gb|ADN55756.1| SAF domain protein [Thermoanaerobacter sp. X513]
          Length = 181

 Score = 39.5 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              V+    I AG V++E  +K + +  S +R +YA S+ DVVG V +   +    IP
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDIPASAVRPDYARSLTDVVGKVVKEGRVRGDFIP 87


>gi|284048527|ref|YP_003398866.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM
           20731]
 gi|283952748|gb|ADB47551.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM
           20731]
          Length = 339

 Score = 39.5 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           A+     V  +  I    VL E  LK ++V  + +        K  +G  T   L    +
Sbjct: 64  AAGNVTVVEAARDIAPQTVLTEEMLKTVEVPANLVPAGALTDKKQALGKKTGIDLFAGDI 123

Query: 82  IPLS 85
           +   
Sbjct: 124 LTER 127


>gi|127511580|ref|YP_001092777.1| SAF domain-containing protein [Shewanella loihica PV-4]
 gi|126636875|gb|ABO22518.1| SAF domain protein [Shewanella loihica PV-4]
          Length = 298

 Score = 39.5 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDHV 81
            +   +V +  +  G++++++ +   Q+    +  +  H  +  +V G +  + + P   
Sbjct: 48  AMADVIVATQPLKKGDIISQANMSVRQIRADTLPLDAIHPSRFGEVAGQMLLQPMAPGRP 107

Query: 82  IPLSVL 87
           +  + L
Sbjct: 108 LIETYL 113


>gi|154499687|ref|ZP_02037725.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC
           29799]
 gi|150271285|gb|EDM98542.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC
           29799]
          Length = 296

 Score = 39.5 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 13/105 (12%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  +  GE +     + ++V   N+  N AHS+ DV GL     L     I  S +    
Sbjct: 48  TQPVLKGETITSDNAEVVEVGGYNLPSNVAHSMDDVEGLYVTADLAEGDYILTSKVSTVP 107

Query: 92  V---ISRGAKVRIILTQGNMTISTAGIALSDA-----SIGDVIAV 128
           V   ++        +  G + IS     L+         GD+I +
Sbjct: 108 VSSDVALND-----IPSGKVAISLTVKTLASGLSDKLQPGDIIRI 147


>gi|261856885|ref|YP_003264168.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2]
 gi|261837354|gb|ACX97121.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2]
          Length = 258

 Score = 39.5 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVL 76
           +     +   VVP   +  G+VL+   L    +  + +  +       +  +G +    L
Sbjct: 39  TAAPQKMRTVVVPVHNLKVGDVLSAKDLATRDIPVAYVPADALTPDDYESHLGQMLTTPL 98

Query: 77  LPDHVIPLSVLHR 89
                I    +  
Sbjct: 99  AQGAPISAMAMEP 111


>gi|293189446|ref|ZP_06608166.1| SAF domain protein [Actinomyces odontolyticus F0309]
 gi|292821536|gb|EFF80475.1| SAF domain protein [Actinomyces odontolyticus F0309]
          Length = 194

 Score = 39.5 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 7  LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
          L+  SL   S  S            +  I  GE L    ++E  V  S     Y  + + 
Sbjct: 11 LIIASLIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVRE--VVLSVDSDVYVPTSEA 68

Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89
           +G V  R + P  ++  + L +
Sbjct: 69 PMGSVVTRQITPGQIVMRTDLSQ 91


>gi|78486069|ref|YP_391994.1| Flp pilus assembly CpaB [Thiomicrospira crunogena XCL-2]
 gi|78364355|gb|ABB42320.1| Flp (type IV) pilus assembly protein CpaB homolog [Thiomicrospira
           crunogena XCL-2]
          Length = 296

 Score = 39.1 bits (90), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VV S  I  GE +    +K + V    +       + ++ VG V  + +     I    L
Sbjct: 57  VVASRDIYRGEKIEADDVKVLNVPMEGLVVKGVIINPQNAVGHVAHQKIYAGEWILAKKL 116

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG--------DVIAV-KNIDTGVMVS 138
                 SR   V  +L +    I           +G        DVI+V ++ D+  MVS
Sbjct: 117 KLESQ-SRFQSVEALLEKTRRAIRLPIEP-DTGLLGIISPGDHVDVISVFESADSKRMVS 174

Query: 139 GSVVDTGTV 147
            +++   TV
Sbjct: 175 RTILQNITV 183


>gi|326773108|ref|ZP_08232392.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505]
 gi|326637740|gb|EGE38642.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505]
          Length = 261

 Score = 39.1 bits (90), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 14  VLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           VL   S+           +V S  I+AG +L +  +    +    +  +   S +  VG 
Sbjct: 10  VLVALSVLRPGPQRGQQVLVASHAISAGAILTDQDVSISTLPTGALPQSPLTSTEQAVGN 69

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
                L    V+  S+         G   R++
Sbjct: 70  RAAISLEKGTVLTASMTSGSLAQQLGDDERLV 101


>gi|269957599|ref|YP_003327388.1| SAF domain-containing protein [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306280|gb|ACZ31830.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
          Length = 227

 Score = 39.1 bits (90), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 21/68 (30%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
               +   VVP+  +  G  L    L  + V  +           D VG V    L    
Sbjct: 51  APPPMRSVVVPTHRLEPGVELRAGDLTVVSVPAALAPDGALTDTADAVGRVPAVALEAGL 110

Query: 81  VIPLSVLH 88
            +  S++ 
Sbjct: 111 PLSASLVA 118


>gi|300781680|ref|ZP_07091534.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
 gi|300533387|gb|EFK54448.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
          Length = 212

 Score = 39.1 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 26/63 (41%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           +  ++ GE L+   ++  ++  + +       + DV G +         V+  + L  P 
Sbjct: 47  TREVSPGEPLSADDVELQRMPEAIVPDGAFDQVSDVEGQIVASTASAGEVVTPTRLLGPD 106

Query: 92  VIS 94
           ++S
Sbjct: 107 LVS 109


>gi|83589608|ref|YP_429617.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073]
 gi|83572522|gb|ABC19074.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073]
          Length = 337

 Score = 39.1 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
                 ++V +  I AGE++ +S L   +   + I  N       VVG   RR +    +
Sbjct: 276 MPAARRSLVAARDIAAGEIITDSCLTAKR-PGTGIPPNLW---DVVVGRQARRDIAAGSI 331

Query: 82  IPLSVL 87
           +   ++
Sbjct: 332 LSWDMI 337


>gi|294506511|ref|YP_003570569.1| Sialic acid synthase [Salinibacter ruber M8]
 gi|294342839|emb|CBH23617.1| Sialic acid synthase [Salinibacter ruber M8]
          Length = 338

 Score = 39.1 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           +   +   VV    I AG  + E R+  ++  +    G  A+ +  V+G  ++R L P  
Sbjct: 275 YRQSMKRRVVAGAEIPAGTTITEQRITLLRAND----GIKANRLDVVLGRKSQRSLQPGE 330

Query: 81  VIPLSVLH 88
            I    L 
Sbjct: 331 AITEDHLK 338


>gi|320161550|ref|YP_004174774.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1]
 gi|320161814|ref|YP_004175039.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1]
 gi|319995403|dbj|BAJ64174.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1]
 gi|319995668|dbj|BAJ64439.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1]
          Length = 290

 Score = 39.1 bits (90), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 25/81 (30%)

Query: 8  LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
          L   ++ ++L           VV +  +  G VL E  L   ++  S          + +
Sbjct: 9  LAIVVFAVALALNQPEPQVSVVVAAGDLPEGRVLTEGDLTAKELPKSLAPEGAVSDPQSL 68

Query: 68 VGLVTRRVLLPDHVIPLSVLH 88
          VG   R        +    L 
Sbjct: 69 VGQRLRVARSAGDPVLPVHLG 89


>gi|194335912|ref|YP_002017706.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme
          BU-1]
 gi|194308389|gb|ACF43089.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme
          BU-1]
          Length = 263

 Score = 39.1 bits (90), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%)

Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
          S+  + +   VV    I AG+ +   +++ +    S +  + +  I  VVG +    ++P
Sbjct: 27 SVAQTSMSRVVVVEQPIEAGKAIKAHQIRSIDWPGSAVPRDASTRIASVVGRIALVSMMP 86

Query: 79 DHVIPLSVLHR 89
             +    L  
Sbjct: 87 GEPVLPGKLAP 97


>gi|320532996|ref|ZP_08033744.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320134787|gb|EFW26987.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 319

 Score = 38.7 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 14  VLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           VL   S+           +V S  I+AG +L +  +    +   ++  +   S    VG 
Sbjct: 68  VLVALSVLRPGPERGQQVLVASRAISAGALLTDQDVSTSTLPAGSLPQSPLTSTGQAVGS 127

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
                L    V+  S+         GA  R++
Sbjct: 128 RAAISLEKGTVLTASMTSGGMAQELGADERLV 159


>gi|197106458|ref|YP_002131835.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
 gi|196479878|gb|ACG79406.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
          Length = 287

 Score = 38.7 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS----IKDVVGLVTRRVLLPDHVIP 83
            +V +  +  G +L  S ++            Y  S       + G V R  L P   + 
Sbjct: 52  VLVAAQALPPGTILKPSHVRWQAWPADAPTAGYLTSAASGPAQIAGAVVRGELQPGQPLT 111

Query: 84  LSVLHRP 90
            + + +P
Sbjct: 112 TTGVVQP 118


>gi|83589202|ref|YP_429211.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073]
 gi|83572116|gb|ABC18668.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073]
          Length = 229

 Score = 38.7 bits (89), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +   +VP+  INA   +    L   QV    +    A    D+VG V    L     +
Sbjct: 46  QAMTQVIVPAHNINAYTQIKPGDLTWRQVPVGAVEPGTARKPDDLVGKVALAELYQGEQV 105

Query: 83  PLSVLHR 89
            L  +  
Sbjct: 106 RLERVGE 112


>gi|328953762|ref|YP_004371096.1| Flp pilus assembly protein CpaB [Desulfobacca acetoxidans DSM
           11109]
 gi|328454086|gb|AEB09915.1| Flp pilus assembly protein CpaB [Desulfobacca acetoxidans DSM
           11109]
          Length = 272

 Score = 38.7 bits (89), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
             I  G VL    LK +Q+   ++  + A  +K + G VTR++++   VI    L  
Sbjct: 50  RNIAPGSVLIPELLKVVQLPKEHVAADAATDLKALEGRVTRQLIVAGEVIQEHELAP 106


>gi|51468905|emb|CAE47778.1| pilus assembling protein [Bdellovibrio bacteriovorus]
          Length = 314

 Score = 38.7 bits (89), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 25/64 (39%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I   + + ++ ++  ++    I+ +      +++G V    +    ++  + 
Sbjct: 56  RVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVKNN 115

Query: 87  LHRP 90
           L  P
Sbjct: 116 LLTP 119


>gi|301612838|ref|XP_002935918.1| PREDICTED: sialic acid synthase-like [Xenopus (Silurana)
           tropicalis]
          Length = 359

 Score = 38.7 bits (89), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G +VV +V I AG VL  S L    V  +  RG     I D+ G   +R +  D  +  
Sbjct: 291 LGKSVVANVKIPAGTVLTLSMLT---VKVAEPRGFPPEEIYDLEGKTVKREIEEDESVTE 347

Query: 85  SVLH 88
             + 
Sbjct: 348 EAIE 351


>gi|27381103|ref|NP_772632.1| hypothetical protein blr5992 [Bradyrhizobium japonicum USDA 110]
 gi|27354269|dbj|BAC51257.1| blr5992 [Bradyrhizobium japonicum USDA 110]
          Length = 356

 Score = 38.7 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V   ++V +  + AGE++  + +   +        +Y      ++G    R L PD  +
Sbjct: 301 PVARKSIVAARALRAGEIIGPADITAKRPGAGRPPIDYWS----LIGTAAPRALEPDDPV 356


>gi|329956541|ref|ZP_08297138.1| SAF domain protein [Bacteroides clarus YIT 12056]
 gi|328524438|gb|EGF51508.1| SAF domain protein [Bacteroides clarus YIT 12056]
          Length = 347

 Score = 38.7 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           LY+ S  S     +  ++  +  ++ G+++ E  +       S   G        VVG  
Sbjct: 274 LYIDSAVSAAKVKLERSIATNKALHPGDIITEEDIHL----LSPGDGFKWAERDKVVGRR 329

Query: 72  TRRVLLPDHVIPLSVLHR 89
            R+ +  + +I  S++  
Sbjct: 330 VRKEIPRNEIIYSSLIEE 347


>gi|289450946|gb|ADC93863.1| N-acetyl neuramic acid synthetase NeuB [Leptospira interrogans
           serovar Canicola]
          Length = 344

 Score = 38.7 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            +   ++V +  I+ GE+ +ES +   +  +     N+      V+G   RR    D +I
Sbjct: 287 PIARKSIVATRNISKGEIFSESNITTKRPGDGLSPMNW----DMVIGKQARRDFQIDELI 342


>gi|78186672|ref|YP_374715.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
 gi|78166574|gb|ABB23672.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
          Length = 266

 Score = 38.7 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
              F +   + +    + V G  VV  +  I+AG  + E++LK +Q   S +    +   
Sbjct: 16  MAAFITARWMGVVQSRSEVSGPTVVIAARAIDAGTAIAENQLKAVQWPRSTVPEGASART 75

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHR 89
            DV G + R  ++    +    L  
Sbjct: 76  DDVAGRIARVSMIAGEPVLPGKLAP 100


>gi|119513229|ref|ZP_01632274.1| sialic acid synthase [Nodularia spumigena CCY9414]
 gi|119462123|gb|EAW43115.1| sialic acid synthase [Nodularia spumigena CCY9414]
          Length = 750

 Score = 38.7 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  ++V +  + AGE++  + ++      S  +G   +   +++G  T+R        
Sbjct: 400 ETLAKSLVINCDLAAGEMITAAMIEVK----SPGKGLQPNRKAELIGKRTKRNFKIGDFF 455

Query: 83  PLSVLHRPYVISRG 96
             S L    V +R 
Sbjct: 456 YPSDLEHEQVKARN 469


>gi|323529414|ref|YP_004231566.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
 gi|323386416|gb|ADX58506.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
          Length = 278

 Score = 38.3 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ G+ LN + ++ +    +++        K + G V R  L P   
Sbjct: 33  SSAVTPVAVATAEVSLGQPLNANMIRTVNWPTASVPPGAFKDPKALDGRVVRTSLEPGEP 92

Query: 82  IPLSVLHRP 90
           +  S L   
Sbjct: 93  VIESKLAPQ 101


>gi|257793106|ref|YP_003186504.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479798|gb|ACV60115.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 272

 Score = 38.3 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 9/124 (7%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             + +V    +     +  A V +  +  GEV+    +    V  S +           +
Sbjct: 27  LVTAFVTDRVASHKVPMATAYVAAHDLTVGEVIGPKDVTRTVVPVSTLPPGALT--ASPI 84

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL----TQGNMTISTAGIALSDASIGD 124
           G      +    V+    L     +     V  +         +T+ST  + L+D S+G 
Sbjct: 85  GKTVTAPVYQGQVLVGGDLGHMGGV---DGVMRLYGMQTRAYPLTLSTQSVPLTDISVGQ 141

Query: 125 VIAV 128
            + V
Sbjct: 142 AVDV 145


>gi|24214309|ref|NP_711790.1| N-acetylneuraminic (sialic) acid synthetase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658022|ref|YP_002108.1| N-acetylneuraminate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24195230|gb|AAN48808.1| N-acetylneuraminic (sialic) acid synthetase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601263|gb|AAS70745.1| N-acetylneuraminate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 344

 Score = 38.3 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            +   ++V +  I+ GE+ +ES +   +  +     N+      V+G   RR    D +I
Sbjct: 287 PIARKSIVATRNISKGEIFSESNITTKRPGDGLSPMNW----DMVIGKQARRDFQIDELI 342


>gi|42521753|ref|NP_967133.1| putative flp pilus assembly protein CpaB [Bdellovibrio
           bacteriovorus HD100]
 gi|39574283|emb|CAE77787.1| putative flp pilus assembly protein CpaB [Bdellovibrio
           bacteriovorus HD100]
          Length = 301

 Score = 38.3 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 25/64 (39%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I   + + ++ ++  ++    I+ +      +++G V    +    ++  + 
Sbjct: 43  RVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVKNN 102

Query: 87  LHRP 90
           L  P
Sbjct: 103 LLTP 106


>gi|292491518|ref|YP_003526957.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4]
 gi|291580113|gb|ADE14570.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4]
          Length = 265

 Score = 38.3 bits (88), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
                + A      VV ++ I  G+ +    LK +     N+     H    V G V  +
Sbjct: 34  PGPVEVVAPETAPVVVAALEIPFGQKIETMHLKVISWPADNMPEGIFHETSAVEGRVASQ 93

Query: 75  VLLPDHVI 82
            + P   I
Sbjct: 94  KIYPGEPI 101


>gi|148231444|ref|NP_001084989.1| hypothetical protein LOC432051 [Xenopus laevis]
 gi|47682297|gb|AAH70693.1| MGC83164 protein [Xenopus laevis]
          Length = 359

 Score = 38.3 bits (88), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G +VV  V I AG VL  + L    V  +  RG     I D+ G   +R +  D  +  
Sbjct: 291 LGKSVVAKVKIPAGTVLTLNMLT---VKVAEPRGFPPEEIYDLEGKTVKREIPEDESVTE 347

Query: 85  SVLH 88
             + 
Sbjct: 348 EAIE 351


>gi|229495106|ref|ZP_04388852.1| SAF domain protein [Rhodococcus erythropolis SK121]
 gi|229318037|gb|EEN83912.1| SAF domain protein [Rhodococcus erythropolis SK121]
          Length = 234

 Score = 38.3 bits (88), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 21/56 (37%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
            VV S  +  G+V+ +S ++  ++ +  +          VVG      +     + 
Sbjct: 57  VVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGETVT 112


>gi|218248201|ref|YP_002373572.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8801]
 gi|257060475|ref|YP_003138363.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8802]
 gi|218168679|gb|ACK67416.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8801]
 gi|256590641|gb|ACV01528.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8802]
          Length = 749

 Score = 38.3 bits (88), Expect = 0.35,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 26/70 (37%), Gaps = 4/70 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  +++ +  ++ G+++    ++      S  +G   +   +++G   +R        
Sbjct: 400 ETLAKSLIINCNLSPGQMITAEMIEVK----SPGKGLQPNRKSELIGTRAKRAFKAGDFF 455

Query: 83  PLSVLHRPYV 92
             S L    +
Sbjct: 456 FPSDLEEAQI 465


>gi|189016770|ref|YP_001711809.1| hypothetical protein CMS_pCSL0080 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|167728941|emb|CAQ03323.1| hypothetical protein pCSL0080 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 231

 Score = 38.3 bits (88), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSV 86
             V S  I  G++++++ L  + ++              DV+G      L    ++  S 
Sbjct: 66  VFVSSRDIARGQIISQTDLGTLDISQGQNTQGIPVADAADVIGQTATVDLPAGSLVTSSS 125

Query: 87  LHRPYVISRGA 97
           +     +  G 
Sbjct: 126 VAPALSVPDGK 136


>gi|255327311|ref|ZP_05368385.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
           25296]
 gi|283458602|ref|YP_003363235.1| sialic acid synthase [Rothia mucilaginosa DY-18]
 gi|255295591|gb|EET74934.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
           25296]
 gi|283134650|dbj|BAI65415.1| sialic acid synthase [Rothia mucilaginosa DY-18]
          Length = 747

 Score = 38.3 bits (88), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I  GEV+ E+ +       S  RG   + +  ++G   +R +        
Sbjct: 401 LAKSLVATRHIAKGEVVTEADVAVK----SPGRGLQPNYLPQLLGRTMQRDVEEGSFFFE 456

Query: 85  SVLHRPYVISRGA 97
             L    +++R  
Sbjct: 457 GDLKD-DLVTRRD 468


>gi|296284551|ref|ZP_06862549.1| Flp pilus assembly protein CpaB [Citromicrobium bathyomarinum
           JL354]
          Length = 353

 Score = 38.3 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 11/95 (11%)

Query: 7   LLFFSLYVLSLDSLFASVIG-------HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
            +  S++  +     A+  G         +V    +  G ++ +  +         +R  
Sbjct: 21  FIARSMFAGASAPEVAAATGPVEPTGPRVLVAQRSLPVGTIITQDAISYQAWPQELVRDA 80

Query: 60  YA----HSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
           Y       +  ++G V R  +     +    L  P
Sbjct: 81  YFIDGEADVSKLLGTVVRYQITAGEPVTQGALVAP 115


>gi|228943410|ref|ZP_04105855.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar berliner ATCC 10792]
 gi|228976380|ref|ZP_04136845.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar thuringiensis str. T01001]
 gi|228783328|gb|EEM31442.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar thuringiensis str. T01001]
 gi|228816270|gb|EEM62450.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar berliner ATCC 10792]
          Length = 331

 Score = 37.9 bits (87), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  V I  GE++  +++        N         ++++  V    L     +   V+  
Sbjct: 17 VTKVDIKKGEIITANKVTMELNVVENALNKL--EAEELLPQVAVYNLSAGTPLTKEVIEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|76663414|emb|CAE47790.1| pilus assembling protein [Bdellovibrio bacteriovorus]
          Length = 302

 Score = 37.9 bits (87), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I   + + ++ ++  ++    I+ +      +++G V    +    +I  + 
Sbjct: 43  RVVVAKEDIAEMQTVYDTMVETKELPADFIQPDAITVPDEIIGNVAAVPIRKGQMIVKNN 102

Query: 87  LHRP 90
           L  P
Sbjct: 103 LLTP 106


>gi|228982964|ref|ZP_04143223.1| hypothetical protein bthur0002_60970 [Bacillus thuringiensis Bt407]
 gi|228777147|gb|EEM25455.1| hypothetical protein bthur0002_60970 [Bacillus thuringiensis Bt407]
          Length = 292

 Score = 37.9 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 20/66 (30%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V     V    I A   +NES    + +    +   Y   I  + G   +  LL    I 
Sbjct: 51  VGTTIYVAKEDIQAKTEVNESMFTPVHIAKGGLLKGYVTDISQIKGAQLKGGLLKGEPIA 110

Query: 84  LSVLHR 89
              L  
Sbjct: 111 TQRLES 116


>gi|269926136|ref|YP_003322759.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789796|gb|ACZ41937.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 258

 Score = 37.9 bits (87), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV +  I  G  +  S L+               SI D V   +   ++   +I   +L
Sbjct: 43  VVVAAQDIAQGSPITASMLETKPFPADFAPSEAVSSINDAVNRYSATNIVKGQIITRPLL 102

Query: 88  HRPYVISR 95
                + +
Sbjct: 103 SDTKQVGK 110


>gi|225375125|ref|ZP_03752346.1| hypothetical protein ROSEINA2194_00749 [Roseburia inulinivorans
          DSM 16841]
 gi|225212999|gb|EEG95353.1| hypothetical protein ROSEINA2194_00749 [Roseburia inulinivorans
          DSM 16841]
          Length = 257

 Score = 37.9 bits (87), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDH 80
          A V  +  + S  + AGE L +  L    V     +   YA   K+++G   +  L    
Sbjct: 10 AYVDTNVYLLSKALPAGEALTKDDLTSCTVKLPRSQSILYASDSKNLIGQYAKTALKKGQ 69

Query: 81 VIPLS-VLHRPYVISRG 96
          ++          +  R 
Sbjct: 70 LLTADFFYSDERLTERN 86


>gi|296393686|ref|YP_003658570.1| SAF domain-containing protein [Segniliparus rotundus DSM 44985]
 gi|296180833|gb|ADG97739.1| SAF domain protein [Segniliparus rotundus DSM 44985]
          Length = 227

 Score = 37.9 bits (87), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 22/70 (31%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                AVV +  +  G  L  + L    ++  ++        + ++G      +     +
Sbjct: 48  PGQAAAVVAAHDLRPGVALGPADLAVRSLSPGDVPAGAVADPRQLLGRTVAGPVRSGEAL 107

Query: 83  PLSVLHRPYV 92
               +  P +
Sbjct: 108 TDVRIITPRL 117


>gi|297544463|ref|YP_003676765.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842238|gb|ADH60754.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 266

 Score = 37.9 bits (87), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 9   FFSLYVLSLDSLFASVIG-----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
            F+LY+     + + + G          +  +  G+ L            S   G     
Sbjct: 1   MFNLYIKVKPLIASIIAGLFIFQSVFAATYTVKPGDTL---------WGISQRYGTTYTK 51

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           +  + GL +  ++ P  V+ +      YV+ +G  + +I  +  +T+     A  +    
Sbjct: 52  LMALNGLQST-IIYPGQVLQVPGSDNTYVVQKGDSLYLIAKKYGITVDMLKSA--NGYKS 108

Query: 124 DVI 126
           D+I
Sbjct: 109 DII 111


>gi|145219385|ref|YP_001130094.1| SAF domain-containing protein [Prosthecochloris vibrioformis DSM
          265]
 gi|145205549|gb|ABP36592.1| SAF domain protein [Chlorobium phaeovibrioides DSM 265]
          Length = 262

 Score = 37.9 bits (87), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            V+ +  I  G+ +   ++K +    ++I         +VVG + R  ++P   +    
Sbjct: 34 KVVIVAQPIELGKAITTEQIKTVNWPGADIPQGAVSKATEVVGRIARVSMMPGEPVLPGK 93

Query: 87 LHR 89
          L  
Sbjct: 94 LAP 96


>gi|303241416|ref|ZP_07327919.1| SAF domain protein [Acetivibrio cellulolyticus CD2]
 gi|302591025|gb|EFL60770.1| SAF domain protein [Acetivibrio cellulolyticus CD2]
          Length = 255

 Score = 37.9 bits (87), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   LF    +  + +         +  S  +  GEV+  ++L+ ++V   N+  N   
Sbjct: 16  CIVLSLFICFILTPMFNSGLKAQTEIIRISSDMKKGEVIAGNKLEVVKVGAYNLPQNIIK 75

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAGI 115
             +DVVG      L+    I  S +    ++         G KV + +T  +     +G 
Sbjct: 76  RKEDVVGKYVNCDLMKGDYILSSKVTDKPLLEFEYLNDLDGTKVAMSITIKSFAAGLSGK 135

Query: 116 ALSDA 120
            L   
Sbjct: 136 -LESG 139


>gi|298345527|ref|YP_003718214.1| hypothetical protein HMPREF0573_10401 [Mobiluncus curtisii ATCC
           43063]
 gi|298235588|gb|ADI66720.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
          Length = 211

 Score = 37.9 bits (87), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 5   RFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
           R +L  +L +L++  +  +V     +   +V    + AG  +    ++ +        G 
Sbjct: 17  RTVLGVALMILAVILVIVTVRVTSHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQ 76

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           Y    +   G V  + +    +IP + L +
Sbjct: 77  YLREGEMQEGSVVVQTIAGGQLIPKASLSQ 106


>gi|221633004|ref|YP_002522229.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum
           DSM 5159]
 gi|221156453|gb|ACM05580.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum
           DSM 5159]
          Length = 331

 Score = 37.9 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  + AG VL    +  ++   +++    A     VVGLV    L+    I L+ L  P
Sbjct: 49  AARDVRAGSVLTSEDVTVVETDPASVAPGTARQPDQVVGLVVAGDLVAGQRILLANLVLP 108

Query: 91  YV 92
            V
Sbjct: 109 SV 110


>gi|149179166|ref|ZP_01857734.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797]
 gi|148841984|gb|EDL56379.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797]
          Length = 591

 Score = 37.9 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
             ++I   G  L +  +   I V   +T  ++  +V+    V
Sbjct: 209 HGISIKLPGTPLQNGQLHQKIKVVPANTNTLMPATVLSQNLV 250


>gi|296158793|ref|ZP_06841622.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
 gi|295890998|gb|EFG70787.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
          Length = 316

 Score = 37.9 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/144 (10%), Positives = 36/144 (25%), Gaps = 20/144 (13%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
                +         VV +  +  G+ +    L+   +  +            + G V  
Sbjct: 31  APVAVTPATHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGAFTEPAQLAGRVPN 88

Query: 74  RVLLPDHVIPLSVLHRPYV--ISRGAKVRIILTQGN----------------MTISTAGI 115
             +  D  +  S L       +  G +   +                      T+   G 
Sbjct: 89  AEIGADSPVLESQLSSGLAERVEAGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDGG 148

Query: 116 ALSDASIGDVIAVKNIDTGVMVSG 139
           ++ +    D    + + + V V  
Sbjct: 149 SMGNGGEIDRTQARLLMSKVRVLA 172


>gi|289615606|emb|CBI57652.1| putative non-ribosomal peptide synthase [Sordaria macrospora]
          Length = 5202

 Score = 37.9 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 11/123 (8%)

Query: 9    FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             +S+YV + D +  +V     +P   I   E++         V      G    +++D++
Sbjct: 889  LWSVYVGNQDVVIGTVTSGRTIPVPGI--DEIIGP---CIATVPLRTDLGG-VRTVRDLL 942

Query: 69   G--LVTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMTISTAGIALSDASIG 123
            G      R ++   V+PL  + R   I  G +   V  +  +    ++T G A  +   G
Sbjct: 943  GSVQAVGREVVRHSVLPLKEIKRVAGIKAGQRPFEVLFVYQETLDNLTTPGDADKEGGKG 1002

Query: 124  DVI 126
             ++
Sbjct: 1003 KIV 1005


>gi|300856049|ref|YP_003781033.1| putative cell wall-binding protein [Clostridium ljungdahlii DSM
          13528]
 gi|300436164|gb|ADK15931.1| putative cell wall binding protein [Clostridium ljungdahlii DSM
          13528]
          Length = 321

 Score = 37.9 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
          +V +  I+ G ++++  +K++QV  + I  NY      + G  T   +  + 
Sbjct: 43 LVAAETISPGTLIDKKMIKKIQVPYNPIFDNYIKDSSKIAGKYTTETISKNE 94


>gi|289578182|ref|YP_003476809.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9]
 gi|289527895|gb|ADD02247.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9]
          Length = 266

 Score = 37.9 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 9   FFSLYVLSLDSLFASVIG-----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
            F+LY+     + + + G          +  +  G+ L            S   G     
Sbjct: 1   MFNLYIKVKPLIASIIAGLFIFQSVFAATYTVKPGDTL---------WGISQKYGTTYTK 51

Query: 64  IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           +  + GL +  ++ P  V+ +      YV+ +G  + +I  +  +T+     A  +    
Sbjct: 52  LMALNGLQST-IIYPGQVLQVPGSDNTYVVQKGDSLYLIAKKYGITVDMLKSA--NGYKS 108

Query: 124 DVI 126
           D+I
Sbjct: 109 DII 111


>gi|317506822|ref|ZP_07964596.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974]
 gi|316254896|gb|EFV14192.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974]
          Length = 227

 Score = 37.5 bits (86), Expect = 0.56,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 23/66 (34%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV +  +  G  L  + L   ++    +    A + + +VG      +     +  + 
Sbjct: 52  PVVVAAHDLKPGAALLPADLGIRRLPPDQVPEGAATAAEQLVGRTVAGPVRTGETLTDAR 111

Query: 87  LHRPYV 92
           +  P +
Sbjct: 112 VIAPRL 117


>gi|147677784|ref|YP_001211999.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum
           SI]
 gi|146273881|dbj|BAF59630.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum
           SI]
          Length = 242

 Score = 37.5 bits (86), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
              V    I A   +    ++   +    I    A S +++VG + +  +LP   I    
Sbjct: 40  RVAVARQRITARTRITAQMIELKDIPAKYINELAAVSPEEIVGKIAKSEILPGEQILRDR 99

Query: 87  LHR 89
           L +
Sbjct: 100 LAQ 102


>gi|325964059|ref|YP_004241965.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470146|gb|ADX73831.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 257

 Score = 37.5 bits (86), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 23/110 (20%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
                  A+  +  ++AG  ++ + +  ++V    +   +  +  D  G      L    
Sbjct: 80  APVSTVTALAAARDLSAGAAISPADVSAVRVPPGMMADGFLQNAGDAAGKQLAAPLRKGQ 139

Query: 81  VIPLSVLHRP-----------------------YVISRGAKVRIILTQGN 107
           ++  + L  P                        ++S G  V ++LT GN
Sbjct: 140 LLTDAQLLGPGLLAGTPPGSAAVPLRMADPSSIQLVSPGQLVNVVLTAGN 189


>gi|315656141|ref|ZP_07909032.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315493143|gb|EFU82743.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 211

 Score = 37.5 bits (86), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 5   RFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
           R +L  +L +L++  +  +V     +   +V    + AG  +    ++ +        G 
Sbjct: 17  RTVLGVALMILAVILVIMTVRVASHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQ 76

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           Y    +   G V  + +    +IP + L +
Sbjct: 77  YLREGEIQEGSVVVQTIAGGQLIPKASLSQ 106


>gi|302871578|ref|YP_003840214.1| N-acetylneuraminate synthase [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574437|gb|ADL42228.1| N-acetylneuraminate synthase [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 348

 Score = 37.5 bits (86), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           ++D  FA+V     V    I AG+VL +  +   +     I+  Y +    ++G   +R 
Sbjct: 283 TMDFAFATV-----VAIKNIKAGDVLTKDNIWVKRPGIGEIKAEYYYD---LLGKRAKRD 334

Query: 76  LLPDHVIPLSVLH 88
           +L D  +    + 
Sbjct: 335 ILEDEHLRWEDIE 347


>gi|149907439|ref|ZP_01896186.1| Type III antifreeze protein:CBS domain:NeuB family [Moritella sp.
           PE36]
 gi|149809109|gb|EDM69038.1| Type III antifreeze protein:CBS domain:NeuB family [Moritella sp.
           PE36]
          Length = 487

 Score = 37.5 bits (86), Expect = 0.59,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V    I  GE++    ++      S  +G   + + D++G    R +       +
Sbjct: 402 LAKSLVAIRHIKPGEIITRDMVEIK----SPGQGLQPNRLNDLIGKKVDRDIERGGFFYM 457

Query: 85  SVL 87
           S +
Sbjct: 458 SDI 460


>gi|258510582|ref|YP_003184016.1| SAF domain-containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477308|gb|ACV57627.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 264

 Score = 37.5 bits (86), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 3/121 (2%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             + +V+   +     +  A V S  +  GE +    +    V  S +           +
Sbjct: 27  LVTAFVMDRVATHKVPMATAYVASHDLTVGETIGAKDVTRTVVPVSTLPPGALT--ASPI 84

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR-IILTQGNMTISTAGIALSDASIGDVIA 127
           G      +    V+    L     ++   ++  +      +T+ST  + ++D S+G  + 
Sbjct: 85  GKTVTAPVYQGQVLVGGDLGHMGGVNGVMRLYGMQTRAYPLTLSTQSVPMTDISVGQAVD 144

Query: 128 V 128
           V
Sbjct: 145 V 145


>gi|91783010|ref|YP_558216.1| putative signal peptide protein, CpaB like [Burkholderia xenovorans
           LB400]
 gi|91686964|gb|ABE30164.1| Putative signal peptide protein, CpaB like protein [Burkholderia
           xenovorans LB400]
          Length = 316

 Score = 37.5 bits (86), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 22/145 (15%)

Query: 15  LSLDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
            +  ++  +V      VV +  +  G+ +    L+   +  +            + G V 
Sbjct: 30  PAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGAFTEPAQLAGRVP 87

Query: 73  RRVLLPDHVIPLSVLHRPYV--ISRGAKVRIILTQGN----------------MTISTAG 114
              +  D  +  S L       +  G +   +                      T+   G
Sbjct: 88  NAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDG 147

Query: 115 IALSDASIGDVIAVKNIDTGVMVSG 139
            ++ +    D    + + + V V  
Sbjct: 148 GSMGNGGEIDRTQARLLMSKVRVLA 172


>gi|326204891|ref|ZP_08194744.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM
           2782]
 gi|325984940|gb|EGD45783.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM
           2782]
          Length = 283

 Score = 37.5 bits (86), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           + C+   L     V  L +   S     V  S  I AG+ +N + ++ ++V + N+    
Sbjct: 12  VSCILLSLVICFAVTPLFNSSLSQRTSIVRVSRDIKAGDKINGNMVQTVEVGSYNLPSGV 71

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
             S  DV+       +     I ++ L    V        +   +  ++++         
Sbjct: 72  IKSKDDVIDKYVLADMKEGDYILITKLSAAPVAENSYLHSLNGEKQAISVT--------- 122

Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
                  V++  +G  +SG ++    V V+ 
Sbjct: 123 -------VRSFASG--LSGKLMPGDIVSVIA 144


>gi|134295594|ref|YP_001119329.1| SAF domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134138751|gb|ABO54494.1| SAF domain protein [Burkholderia vietnamiensis G4]
          Length = 314

 Score = 37.5 bits (86), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           V +  ++ A+     V+ +  + AG+ +    +K   +  +++          VVG V  
Sbjct: 35  VPAQPAVAAN-PAPVVIATRTLPAGQPIAADAVKLQAI--ASVPTGAVVDPATVVGRVPA 91

Query: 74  RVLLPDHVIPLSVL 87
           R +     I    L
Sbjct: 92  RDIPASAPITPDAL 105


>gi|209962930|gb|ACJ02245.1| putative nitrous oxide reductase [uncultured bacterium]
          Length = 233

 Score = 37.5 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 14/114 (12%)

Query: 19  SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV---GLVTRRV 75
             FA      +V + ++N   +                +          V   G   R  
Sbjct: 94  PTFAEPHDCIIVRADIVNPKSIWTRDDPMWEDARQWAAKDGVNLDTDSKVIRDGNRVRVY 153

Query: 76  LLPDHVIPLSVLHRPYVISRGAKVRIILTQ--------GNMTISTAGIALSDAS 121
           ++    +  S     + + +G +V I +T           +TI+  GIA+   +
Sbjct: 154 MVS---VAPSFTMEKFTVKQGDEVTIFVTNMDRIDDLTHGLTIANYGIAMEVGA 204


>gi|326202872|ref|ZP_08192739.1| SAF domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986949|gb|EGD47778.1| SAF domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 216

 Score = 37.5 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 22/121 (18%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
           Y+ +   +        VV +  I  G V+ E  L++ QV  S +       I +V G   
Sbjct: 27  YIFTKYPINTEKTVAVVVATENIKEGTVIEEGFLRKKQVYASGVNSGVETEIGNVAGKKA 86

Query: 73  RRVLLPDHVIPLSVL----------------------HRPYVISRGAKVRIILTQGNMTI 110
              +  D  I    L                          +I +G+ V I L +    +
Sbjct: 87  LTNIHRDDYIRAHDLLERKDWYRDDERIIILPVSMEERLANLIRKGSYVDIRLQRDTSEV 146

Query: 111 S 111
           +
Sbjct: 147 T 147


>gi|85373132|ref|YP_457194.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594]
 gi|84786215|gb|ABC62397.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594]
          Length = 371

 Score = 37.5 bits (86), Expect = 0.66,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
             +V    +  G ++    L         ++  Y       I  ++G V R  +     +
Sbjct: 46  KVLVAQRGLPVGTIITADALGFQMWPEELVQDAYFIEGESDITQLLGTVVRHPVTAGEPL 105

Query: 83  PLSVLHRP 90
               L  P
Sbjct: 106 TQGTLVSP 113


>gi|288870575|ref|ZP_06114611.2| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
 gi|288866630|gb|EFC98928.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
          Length = 275

 Score = 37.5 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           S  +  G ++ +  ++  +V + N+  N A S +DVVG      L+    I  S +    
Sbjct: 44  SKPVLKGAIITDKNVELAEVGSYNLPANIARSTEDVVGKYAVSDLMEGDYILSSKISALP 103

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDA-----SIGDVIAV 128
           + S        +  G + IS +   L+         GD++ +
Sbjct: 104 LTS--DIALNDIPSGRVAISLSVKTLASGLSDKLQAGDIVRI 143


>gi|153834861|ref|ZP_01987528.1| sialic acid synthase [Vibrio harveyi HY01]
 gi|148868732|gb|EDL67809.1| sialic acid synthase [Vibrio harveyi HY01]
          Length = 333

 Score = 37.5 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           V+  ++V    I+AG+++    L+  +  N    G       +VVG V ++      +I
Sbjct: 279 VVRKSIVAGQEISAGQLITPDMLEIKRPGN----GISPTRWDEVVGSVAKKDYQIGELI 333


>gi|300788927|ref|YP_003769218.1| SAF domain-containing protein [Amycolatopsis mediterranei U32]
 gi|299798441|gb|ADJ48816.1| SAF domain-containing protein [Amycolatopsis mediterranei U32]
          Length = 221

 Score = 37.1 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           AV  +  +  GEV+    L+E+QV  +  +R        DVVG  +   L P  ++    
Sbjct: 61  AVGVARPVRYGEVITADALREVQVRPDPGVRPLPWDRRFDVVGRTSPTDLQPGEIVTPDA 120

Query: 87  LHRPYVI 93
           +  P ++
Sbjct: 121 VTDPAIV 127


>gi|167908128|ref|ZP_02495333.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           NCTC 13177]
          Length = 256

 Score = 37.1 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVARTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|254478253|ref|ZP_05091634.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035849|gb|EEB76542.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 181

 Score = 37.1 bits (85), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              V+    I AG V++E  +K + V  S +  +YA S  DVVG V +   +    IP
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVIDVPASVVNPDYARSPADVVGKVVKEGRVRGDFIP 87


>gi|27381082|ref|NP_772611.1| polysaccharide biosynthesis related protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27354248|dbj|BAC51236.1| blr5971 [Bradyrhizobium japonicum USDA 110]
          Length = 641

 Score = 37.1 bits (85), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  I AG V+++  +       S  +G     +  ++G + +R +  D     
Sbjct: 295 LAKSLVAARDIEAGTVISDDDIAVK----SPGQGLSPLKMPALIGKILKRKMAADDYFFQ 350

Query: 85  SVLHR 89
           S L  
Sbjct: 351 SDLDE 355


>gi|167841424|ref|ZP_02468108.1| putative pilus assembly protein CpaB [Burkholderia thailandensis
           MSMB43]
          Length = 281

 Score = 37.1 bits (85), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  +N GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|187478777|ref|YP_786801.1| pilus assembly protein [Bordetella avium 197N]
 gi|115423363|emb|CAJ49897.1| putative pilus assembly protein [Bordetella avium 197N]
          Length = 270

 Score = 37.1 bits (85), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLLPDH 80
           V+   +V    + AG++L E  +   ++  +        S +    ++G   +  ++   
Sbjct: 59  VMVTRLVAWADLEAGQLLTEDDIASREIPKNWAPHQSL-SPEQTGLLIGSRLKVPVMAGQ 117

Query: 81  VIPLSVLHRPYVISRGAKVRIILTQGNMTI 110
            I  + +     +S G   R+ + +  +T+
Sbjct: 118 PILQADIE---FVSPGTAARLGVGKRALTL 144


>gi|229065648|ref|ZP_04200877.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus AH603]
 gi|228715621|gb|EEL67416.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus AH603]
          Length = 331

 Score = 37.1 bits (85), Expect = 0.73,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  V I  GE++  +++        N         ++++  V    L     +   V+  
Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|220932531|ref|YP_002509439.1| N-acetylneuraminate synthase [Halothermothrix orenii H 168]
 gi|219993841|gb|ACL70444.1| N-acetylneuraminate synthase [Halothermothrix orenii H 168]
          Length = 331

 Score = 37.1 bits (85), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            ++  ++V +  I  GE   E  L   +   + I   Y      ++G V +R    D +I
Sbjct: 274 DIVRKSIVAAHSIRKGERFTEGNLTVKR-PGNGISPMYW---DQIIGKVAKRDYKKDELI 329


>gi|85709744|ref|ZP_01040809.1| N-acylneuraminate-9-phosphate synthase [Erythrobacter sp. NAP1]
 gi|85688454|gb|EAQ28458.1| N-acylneuraminate-9-phosphate synthase [Erythrobacter sp. NAP1]
          Length = 749

 Score = 37.1 bits (85), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+G ++V +  I  G +L +          S  +G   +  KD++G   +  +      
Sbjct: 400 EVLGKSLVAARPIMRGAMLCDEDFAVR----SPGQGLEPYRRKDLLGCAAKHDMKAGDFF 455

Query: 83  PLSVLHRPYVISRG 96
             S L      +R 
Sbjct: 456 FPSDLDEERTKARN 469


>gi|167924331|ref|ZP_02511422.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           BCC215]
          Length = 281

 Score = 37.1 bits (85), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|307265038|ref|ZP_07546599.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920023|gb|EFN50236.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 181

 Score = 37.1 bits (85), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV    I AG V++E  +K + V  S +  +YA S  DVVG V +   +    IP
Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKVIDVPASVVNPSYARSPADVVGKVVKDGRVKGDFIP 87


>gi|229014866|ref|ZP_04171963.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          mycoides DSM 2048]
 gi|228746447|gb|EEL96353.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          mycoides DSM 2048]
          Length = 331

 Score = 37.1 bits (85), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  V I  GE++  +++        N         ++++  V    L     +   V+  
Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|229170303|ref|ZP_04297981.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus AH621]
 gi|228613164|gb|EEK70311.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus AH621]
          Length = 331

 Score = 37.1 bits (85), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  V I  GE++  +++        N         ++++  V    L     +   V+  
Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|195055885|ref|XP_001994843.1| GH13892 [Drosophila grimshawi]
 gi|193892606|gb|EDV91472.1| GH13892 [Drosophila grimshawi]
          Length = 376

 Score = 37.1 bits (85), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G ++V +  ++ G  +  S L       S I          ++G+   R +  D  I  
Sbjct: 315 LGKSIVAARDLDKGHKIQVSDLTIKVSEPSGISAETYFD---IIGMQLTRSVNQDEPIIE 371

Query: 85  SVL 87
           +VL
Sbjct: 372 NVL 374


>gi|187919323|ref|YP_001888354.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
 gi|187717761|gb|ACD18984.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
          Length = 269

 Score = 37.1 bits (85), Expect = 0.76,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
          + S  ++     VV +  IN G+ +    LK     ++++       I+ + G V +  L
Sbjct: 20 MVSQSSNATTRVVVAAADINLGQRIGPDYLKLTDWPSNSVPPGSYSDIQKLDGRVLKESL 79

Query: 77 LPDHVI 82
          L    I
Sbjct: 80 LRGEPI 85


>gi|254192395|ref|ZP_04898834.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           S13]
 gi|169649153|gb|EDS81846.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           S13]
          Length = 281

 Score = 37.1 bits (85), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|167744174|ref|ZP_02416948.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 14]
          Length = 281

 Score = 37.1 bits (85), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|167725246|ref|ZP_02408482.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           DM98]
          Length = 245

 Score = 37.1 bits (85), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|156972992|ref|YP_001443899.1| sialic acid synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156524586|gb|ABU69672.1| hypothetical protein VIBHAR_00670 [Vibrio harveyi ATCC BAA-1116]
          Length = 333

 Score = 37.1 bits (85), Expect = 0.77,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           V+  ++V    I+AG++++   L+  +  N    G       +VVG V ++      +I
Sbjct: 279 VVRKSIVAGQEISAGQLISPDMLEIKRPGN----GISPTRWDEVVGSVAKKDYQIGELI 333


>gi|53723206|ref|YP_112191.1| pilus assembly-related, exported protein [Burkholderia pseudomallei
           K96243]
 gi|76817358|ref|YP_336468.1| pilus assembly transmembrane protein [Burkholderia pseudomallei
           1710b]
 gi|126444606|ref|YP_001064075.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           668]
 gi|126455786|ref|YP_001076988.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1106a]
 gi|167829714|ref|ZP_02461185.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 9]
 gi|167899812|ref|ZP_02487213.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           7894]
 gi|167916475|ref|ZP_02503566.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           112]
 gi|217424287|ref|ZP_03455786.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           576]
 gi|226194084|ref|ZP_03789685.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           Pakistan 9]
 gi|237507313|ref|ZP_04520028.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
 gi|242313081|ref|ZP_04812098.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1106b]
 gi|254182584|ref|ZP_04889178.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1655]
 gi|254187135|ref|ZP_04893650.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254262844|ref|ZP_04953709.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1710a]
 gi|254296484|ref|ZP_04963940.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           406e]
 gi|52213620|emb|CAH39674.1| putative pilus assembly-related, exported protein [Burkholderia
           pseudomallei K96243]
 gi|76581831|gb|ABA51305.1| pilus assembly transmembrane protein [Burkholderia pseudomallei
           1710b]
 gi|126224097|gb|ABN87602.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           668]
 gi|126229554|gb|ABN92967.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1106a]
 gi|157806446|gb|EDO83616.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           406e]
 gi|157934818|gb|EDO90488.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184213119|gb|EDU10162.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1655]
 gi|217392752|gb|EEC32775.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           576]
 gi|225934029|gb|EEH30015.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           Pakistan 9]
 gi|234999518|gb|EEP48942.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
 gi|242136320|gb|EES22723.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1106b]
 gi|254213846|gb|EET03231.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           1710a]
          Length = 281

 Score = 37.1 bits (85), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|304391083|ref|ZP_07373035.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp.
          curtisii ATCC 35241]
 gi|304325966|gb|EFL93212.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp.
          curtisii ATCC 35241]
          Length = 187

 Score = 37.1 bits (85), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 12 LYVLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
          +  + L  +   V  H    +V    + AG  +    ++ +        G Y    +   
Sbjct: 2  ILAVILVIVTVRVTSHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGEMQE 61

Query: 69 GLVTRRVLLPDHVIPLSVLHR 89
          G V  + +    +IP + L +
Sbjct: 62 GSVVVQTIAGGQLIPKASLSQ 82


>gi|308234323|ref|ZP_07665060.1| Flp pilus assembly protein CpaB [Atopobium vaginae DSM 15829]
          Length = 272

 Score = 37.1 bits (85), Expect = 0.84,   Method: Composition-based stats.
 Identities = 6/72 (8%), Positives = 22/72 (30%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
            + +   +   VV +  +  G+ +    +      +     +   +  DV+G   +  + 
Sbjct: 40  IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 99

Query: 78  PDHVIPLSVLHR 89
            +  +       
Sbjct: 100 ENVPLSTMHFTE 111


>gi|302387867|ref|YP_003823689.1| SAF domain protein [Clostridium saccharolyticum WM1]
 gi|302198495|gb|ADL06066.1| SAF domain protein [Clostridium saccharolyticum WM1]
          Length = 283

 Score = 37.1 bits (85), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  + +         V  +  I  G+ +    +  ++    N+  +  +
Sbjct: 15  CIITALIICFGLTPMFNNALQSKVELVRVTTEIKKGDEITAGMITAVETGGYNLPSDVIY 74

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHR 89
             +DV+G      L     I  S L  
Sbjct: 75  KKEDVIGKFANADLYKGDYILKSKLSD 101


>gi|317133361|ref|YP_004092675.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3]
 gi|315471340|gb|ADU27944.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3]
          Length = 287

 Score = 37.1 bits (85), Expect = 0.84,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 12/131 (9%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
            +   +      + L +         V    +I  G  +  + ++  QV+  N++ N   
Sbjct: 45  SIGLAVVVGFGGVFLVNRLTMATVPVVRAKEIIPQGTQITPNMIEVDQVSKYNLQSNVTG 104

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
           +   VVG      ++P   I    L +   +         L  G M +S     LSDA  
Sbjct: 105 NTSLVVGAYATTEIMPQDNITGDKLSKSNPVY-------TLDTGEMLVSVPVKNLSDALA 157

Query: 121 ---SIGDVIAV 128
                GD++ V
Sbjct: 158 GQLKAGDIVRV 168


>gi|167851181|ref|ZP_02476689.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
           B7210]
          Length = 253

 Score = 37.1 bits (85), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|251795111|ref|YP_003009842.1| SAF domain protein [Paenibacillus sp. JDR-2]
 gi|247542737|gb|ACS99755.1| SAF domain protein [Paenibacillus sp. JDR-2]
          Length = 237

 Score = 37.1 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 9/139 (6%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           L + L+ L    +        +V    + AG  L E+ +   ++             K  
Sbjct: 20  LVYGLFQLQKLQVTRGETVEVIVAKQFVEAGRRLTEADIAYKRIPREGYEHEMLVDAKQA 79

Query: 68  VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           VG+ T   L  +  I    + + +++  G +    + +  +   + GI       GD + 
Sbjct: 80  VGMETVIPLGTNEPILGWKIDKYHLLPTGLESTFQIPRDYVRSISNGI-----RAGDKVT 134

Query: 128 V----KNIDTGVMVSGSVV 142
           V    +N  +  +    V 
Sbjct: 135 VYLSGENEPSRRIFDSLVT 153


>gi|147900772|ref|NP_001087593.1| N-acetylneuraminic acid synthase [Xenopus laevis]
 gi|51513381|gb|AAH80398.1| MGC84329 protein [Xenopus laevis]
          Length = 359

 Score = 37.1 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G +VV  V I AG VL  + L    V  +  RG     I D+ G   +R +  D  +  
Sbjct: 291 LGKSVVAKVKIPAGTVLTLNMLT---VKVAEPRGFPPEEIYDLEGKTLKREIEEDDSVTE 347

Query: 85  SVLH 88
             + 
Sbjct: 348 EAIE 351


>gi|167821373|ref|ZP_02453053.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 91]
          Length = 251

 Score = 36.8 bits (84), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|78186538|ref|YP_374581.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
 gi|78166440|gb|ABB23538.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
          Length = 262

 Score = 36.8 bits (84), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 25/63 (39%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            V+ ++ I  G+ +   ++K +    ++       +  DVV  + R  ++P   +    
Sbjct: 34 KVVIVALPIELGKAITAEQIKAVNWPGTDAPQGAYANTADVVSRIARVSMMPGEPVLPGK 93

Query: 87 LHR 89
          L  
Sbjct: 94 LAP 96


>gi|322389754|ref|ZP_08063301.1| pyruvate phosphate dikinase [Streptococcus parasanguinis ATCC 903]
 gi|321143593|gb|EFX39024.1| pyruvate phosphate dikinase [Streptococcus parasanguinis ATCC 903]
          Length = 872

 Score = 36.8 bits (84), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D+ G++  + ++        +     V++RG     +   G +TIS    +LS  S
Sbjct: 428 TSPEDIEGMIVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEENKSLSCGS 484

Query: 122 I----GDVIAVKNIDTGVMVSG 139
           +    GD+I+V +  +G +  G
Sbjct: 485 LVLREGDLISV-DGYSGRIYRG 505


>gi|319947190|ref|ZP_08021424.1| pyruvate phosphate dikinase [Streptococcus australis ATCC 700641]
 gi|319747238|gb|EFV99497.1| pyruvate phosphate dikinase [Streptococcus australis ATCC 700641]
          Length = 873

 Score = 36.8 bits (84), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D+ G++  + ++        +     V++RG     +   G +TIS    +LS  S
Sbjct: 428 TSPEDIEGMIVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEENKSLSCGS 484

Query: 122 I----GDVIAVKNIDTGVMVSG 139
           +    GD+I+V +  +G +  G
Sbjct: 485 LVLREGDLISV-DGYSGRIYRG 505


>gi|328943875|ref|ZP_08241340.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM
          15829]
 gi|327491844|gb|EGF23618.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM
          15829]
          Length = 255

 Score = 36.8 bits (84), Expect = 0.94,   Method: Composition-based stats.
 Identities = 6/72 (8%), Positives = 22/72 (30%)

Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
           + +   +   VV +  +  G+ +    +      +     +   +  DV+G   +  + 
Sbjct: 23 IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 82

Query: 78 PDHVIPLSVLHR 89
           +  +       
Sbjct: 83 ENVPLSTMHFTE 94


>gi|134097376|ref|YP_001103037.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL
          2338]
 gi|291009066|ref|ZP_06567039.1| hypothetical protein SeryN2_31485 [Saccharopolyspora erythraea
          NRRL 2338]
 gi|133909999|emb|CAM00111.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL
          2338]
          Length = 183

 Score = 36.8 bits (84), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 17/64 (26%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            +V +  +  G VL    +    +      G     + +  G V          +    
Sbjct: 23 PVLVAARDLAPGHVLEPDDVARRTMPAELAPGGVLSEVDEATGRVLGTASRSGEPLTDVR 82

Query: 87 LHRP 90
          L  P
Sbjct: 83 LAGP 86


>gi|120603674|ref|YP_968074.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris DP4]
 gi|120563903|gb|ABM29647.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris DP4]
          Length = 352

 Score = 36.8 bits (84), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V +  I AG+VL  + L   +  +      Y     +VVG+  R  +  D V+    
Sbjct: 295 RSLVAARAIPAGKVLEPADLTWKRPAHGISPRCY----DEVVGMKARADIAEDTVLKWGH 350

Query: 87  LH 88
           L 
Sbjct: 351 LE 352


>gi|46578765|ref|YP_009573.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448177|gb|AAS94832.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232632|gb|ADP85486.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris RCH1]
          Length = 352

 Score = 36.8 bits (84), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V +  I AG+VL  + L   +  +      Y     +VVG+  R  +  D V+    
Sbjct: 295 RSLVAARAIPAGKVLEPADLTWKRPAHGISPRCY----DEVVGMKARADIAEDTVLKWGH 350

Query: 87  LH 88
           L 
Sbjct: 351 LE 352


>gi|89897311|ref|YP_520798.1| hypothetical protein DSY4565 [Desulfitobacterium hafniense Y51]
 gi|89336759|dbj|BAE86354.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 277

 Score = 36.8 bits (84), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 6  FLLFFSLYVL-SLDSLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYA 61
            +  SL++   L  LF   +        V   I +G V+ +  ++ ++V + N+  N  
Sbjct: 13 LCIVLSLFICFVLTPLFNQGVARKATVVRVVKDIKSGGVITKDMVQTVEVGSYNLPENVI 72

Query: 62 HSIKDVVGLVTRRVLLPDHVI 82
             + V+G      LLP   I
Sbjct: 73 RQSETVIGKYAEADLLPGDSI 93


>gi|332188388|ref|ZP_08390113.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17]
 gi|332011617|gb|EGI53697.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17]
          Length = 329

 Score = 36.8 bits (84), Expect = 0.97,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 10/101 (9%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIP 83
            +V +  +  G +++ + LK        + G Y       +  + G V R  +     + 
Sbjct: 51  VLVATRALPVGTIIDATALKFQPWPKEMVGGAYYLKGQADLAKLQGTVVRYAITAGQPLT 110

Query: 84  LSVLHRPYVISRGAKVRIILT-QGNMTISTAGIALSDASIG 123
              + +P     G +  +       M   T  ++      G
Sbjct: 111 QGAVVQP-----GDRGFLAAALTPGMRAVTVPVSAQTGVAG 146


>gi|323341956|ref|ZP_08082189.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464381|gb|EFY09574.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 269

 Score = 36.8 bits (84), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 4/106 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV    + A   + +  ++   V             + VVG VT   +    +   
Sbjct: 36  LTQVVVALKPLTAQTRITQDMIEVKNVHKDAAPEGAFADAERVVGKVTTTKMSVGDMFTG 95

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
               +  V+ +G+     +   NM   T  +       G +I V N
Sbjct: 96  ---EKVEVVGQGSSGLSTVLTDNMRAYTVKLEGQYGMQG-LIRVGN 137


>gi|228918804|ref|ZP_04082202.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228840876|gb|EEM86120.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 585

 Score = 36.8 bits (84), Expect = 0.97,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           ++ +  IN GE++   +    +  N         + + ++  V +  +  +  I  +++ 
Sbjct: 272 LIANKEINKGEIIPIQKTSYKRCDNEKA--LMPLNAEKLLPQVAKNTIQFNEPITANMIE 329

Query: 89  RPYV 92
           +P +
Sbjct: 330 KPKI 333


>gi|114321312|ref|YP_742995.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227706|gb|ABI57505.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 316

 Score = 36.8 bits (84), Expect = 0.97,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 26  GHAVVPSVV-INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           GH VV +V  +  G+++ E+ +     T   +        ++V+GL     +    ++  
Sbjct: 55  GHPVVFAVTELEPGQLVGEADIHTE--TLRRVPPLAFSDPEEVIGLRVEAPIQEGELLTA 112

Query: 85  SVLHRPYVISRG 96
                   +SRG
Sbjct: 113 PRFSVASQVSRG 124


>gi|83589197|ref|YP_429206.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC
          39073]
 gi|83572111|gb|ABC18663.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC
          39073]
          Length = 212

 Score = 36.8 bits (84), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
          A+     V     I AGE +    +  ++V  S +    A + KD+ G   +  LL D  
Sbjct: 32 ATKTVEVVKAVRFIPAGERITADSITTVRVPES-MASGLATNPKDLEGKEAKVSLLKDQF 90

Query: 82 I 82
          +
Sbjct: 91 V 91


>gi|284992651|ref|YP_003411205.1| SAF domain-containing protein [Geodermatophilus obscurus DSM 43160]
 gi|284065896|gb|ADB76834.1| SAF domain protein [Geodermatophilus obscurus DSM 43160]
          Length = 317

 Score = 36.8 bits (84), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%)

Query: 16  SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
           +     A         +  + AG VL    L  + V   ++ G Y  +     G    R 
Sbjct: 55  ARVVTAADATVPVWSAAGDLAAGTVLAAGDLVAVDVRLDDVAGAYLATSTRPEGRTLARA 114

Query: 76  LLPDHVIPLSVLHRP 90
           +    ++P + L  P
Sbjct: 115 VRNGELLPRTALEEP 129


>gi|229827062|ref|ZP_04453131.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC
           49176]
 gi|229788680|gb|EEP24794.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC
           49176]
          Length = 278

 Score = 36.8 bits (84), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 14  VLSLDSLFASVIGHA--VVP-SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
              L  L+  ++     VV     I  GE++   +L+ + V    +  +   SI  + G 
Sbjct: 22  AFVLTPLYGGILEKQEEVVRVKEKITEGELITADKLETVNVGAYGLSPDVVKSIDGITGK 81

Query: 71  VTRRVLLPDHVIPLSVLHRPYV 92
             +        I    L    +
Sbjct: 82  YAKTDFYKGSYITGEGLSDVAL 103


>gi|170692565|ref|ZP_02883727.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M]
 gi|170142221|gb|EDT10387.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M]
          Length = 278

 Score = 36.8 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ G+ LN + ++ +    +++        K + G V R  L P   
Sbjct: 33  SSALTPVAVATAEVSLGQPLNSTMIRTVNWPTASVPPGAFKDPKALDGRVVRASLEPGEP 92

Query: 82  IPLSVLHRP 90
           +  S L   
Sbjct: 93  VIESKLAPQ 101


>gi|167038605|ref|YP_001666183.1| SAF domain-containing protein [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|320116994|ref|YP_004187153.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
          finnii Ako-1]
 gi|166857439|gb|ABY95847.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319930085|gb|ADV80770.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii
          Ako-1]
          Length = 181

 Score = 36.8 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              V+    I AG V++E  +K + V  S ++ NYA S+ +VVG V +   +    IP
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDVPASAVKPNYARSLSNVVGKVVKEGRVRGDFIP 87


>gi|83717368|ref|YP_440455.1| pilus assembly protein [Burkholderia thailandensis E264]
 gi|167617228|ref|ZP_02385859.1| pilus assembly protein [Burkholderia thailandensis Bt4]
 gi|257141103|ref|ZP_05589365.1| pilus assembly protein [Burkholderia thailandensis E264]
 gi|83651193|gb|ABC35257.1| pilus assembly protein [Burkholderia thailandensis E264]
          Length = 279

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  +N GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|266619843|ref|ZP_06112778.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
 gi|288868552|gb|EFD00851.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
          Length = 283

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 7   LLFFSLYVL-SLDSLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYAH 62
            +  SL +   +  +F   +   V    V   I  GE + +  +  ++    N+  N  +
Sbjct: 15  CIVVSLLICFGITPMFNDALKSKVTLVRVTKEIRTGEQITDKMVTSVEAVGYNLPSNVIY 74

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
            I++VVG      L     I  S L    ++ 
Sbjct: 75  KIEEVVGKYANADLYKGDYILKSKLSDTPMLR 106


>gi|289642191|ref|ZP_06474342.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
 gi|289508037|gb|EFD28985.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
          Length = 275

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 28/86 (32%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
             V +            VV +  +  G  +  + ++ + +    +      S +D VG  
Sbjct: 39  FAVAAARPARPPSPTPVVVAAADLAGGATMAATDVRMVSLPTDVVPVGAVRSPQDAVGRT 98

Query: 72  TRRVLLPDHVIPLSVLHRPYVISRGA 97
               +     I  + +  P +I+R  
Sbjct: 99  LTAAVRQGEPITDARVLGPGLITRRQ 124


>gi|304405122|ref|ZP_07386782.1| SAF domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304346001|gb|EFM11835.1| SAF domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 240

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
          +   VVP   I AGE L  + L    +  S ++ +    + +  G      L  +  +
Sbjct: 37 MVRIVVPKRFIAAGERLEAADLTYRSIAKSAVQQDMVLELVEADGWEAVVPLGAEEPL 94


>gi|195110807|ref|XP_001999971.1| GI24828 [Drosophila mojavensis]
 gi|193916565|gb|EDW15432.1| GI24828 [Drosophila mojavensis]
          Length = 377

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G ++V S  +  G+++  + +    +  S   G YA    +++       +  D  I  
Sbjct: 316 LGKSIVASRNLLKGQIIQAADIA---IKVSEPSGIYAERYFEIINKQLTDNVNEDEPITE 372

Query: 85  SVLHR 89
            VL  
Sbjct: 373 HVLSA 377


>gi|193213116|ref|YP_001999069.1| Flp pilus assembly protein CpaB [Chlorobaculum parvum NCIB 8327]
 gi|193086593|gb|ACF11869.1| Flp pilus assembly protein CpaB [Chlorobaculum parvum NCIB 8327]
          Length = 263

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%)

Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
             V+ ++ I+AG+V+   ++K +Q  +S +  N      DVVG V R  ++    +  
Sbjct: 34 AKVVIVAMPIDAGKVIAPDQIKAVQWPSSAVPLNAFARTADVVGRVARVSMIAGEPVLP 92


>gi|167579113|ref|ZP_02371987.1| pilus assembly protein [Burkholderia thailandensis TXDOH]
          Length = 279

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  +N GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  + L  
Sbjct: 93  VLGTKLAP 100


>gi|326793922|ref|YP_004311742.1| N-acetylneuraminate synthase [Marinomonas mediterranea MMB-1]
 gi|326544686|gb|ADZ89906.1| N-acetylneuraminate synthase [Marinomonas mediterranea MMB-1]
          Length = 750

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
             +  ++V +  +  G+++  + LK M    S  +G     I ++VG   +R +      
Sbjct: 401 ETLAKSIVAAASLKKGQLVTRNVLKIM----SPGQGLQPVYIDELVGRPAKRDISEGDYF 456

Query: 83  PLSVLHRPYVISR 95
             S L    + +R
Sbjct: 457 YESDLDGEILEAR 469


>gi|317486066|ref|ZP_07944919.1| NeuB family protein [Bilophila wadsworthia 3_1_6]
 gi|316922693|gb|EFV43926.1| NeuB family protein [Bilophila wadsworthia 3_1_6]
          Length = 352

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V +  I AG+++++  L   +        +Y     +V+G+  R  +  D V+  + 
Sbjct: 295 RSLVANRNIPAGKIIDKDDLTWKRPAGGISPRHYY----EVLGMAARADIEEDTVLQWAH 350

Query: 87  LH 88
           L 
Sbjct: 351 LE 352


>gi|229194313|ref|ZP_04321146.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus ATCC 10876]
 gi|228589166|gb|EEK47152.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          cereus ATCC 10876]
          Length = 331

 Score = 36.8 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  + I  GE++  +++        N         ++++  +    L     +   V+  
Sbjct: 17 VTKIDIKKGEIITANKIAMELDVVENALNQL--EAEELLPQIALYNLSAGTPLSKEVMEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|254445443|ref|ZP_05058919.1| NeuB family [Verrucomicrobiae bacterium DG1235]
 gi|198259751|gb|EDY84059.1| NeuB family [Verrucomicrobiae bacterium DG1235]
          Length = 345

 Score = 36.8 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++  S  I AGEV     L+ ++ +      ++    ++++G   +R L     +    
Sbjct: 289 RSIYASQDIEAGEVFTTENLRIVRPSLGLGPKHW----EEILGTTAKRNLAAGTPLSKQD 344

Query: 87  L 87
           L
Sbjct: 345 L 345


>gi|255020087|ref|ZP_05292158.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC
           51756]
 gi|254970449|gb|EET27940.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC
           51756]
          Length = 419

 Score = 36.8 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVIPL 84
            AVVP   I  G +L+ S +    +       +     +     G      LL    I  
Sbjct: 67  KAVVPVQDIAPGTILDLSMVAARSIPADTAPSDVITPETFDQYAGHRVNVPLLQGRPILA 126

Query: 85  SVLH 88
           S L 
Sbjct: 127 SYLS 130


>gi|257784838|ref|YP_003180055.1| SAF domain-containing protein [Atopobium parvulum DSM 20469]
 gi|257473345|gb|ACV51464.1| SAF domain protein [Atopobium parvulum DSM 20469]
          Length = 275

 Score = 36.8 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +V +  I  GE L+ S  +     +  I      + + V+G     V+     +    L 
Sbjct: 51  LVATKQIEPGETLSSSNTQVKSWISDLIPEGAITNPESVMGRTVSSVIGVGMPVVSLHLR 110

Query: 89  RPYVISRGAKVRIILTQGNMTIS 111
                   +++ I      +TIS
Sbjct: 111 SVA-----SQITIPENLIGLTIS 128


>gi|312794261|ref|YP_004027184.1| SAF domain-containing protein [Caldicellulosiruptor
          kristjanssonii 177R1B]
 gi|312181401|gb|ADQ41571.1| SAF domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 194

 Score = 36.4 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 4  VRFLLFFSLYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
          ++  +  ++ V  L  +F S    +    V   +I+ GE+++++ +  +++ +  +    
Sbjct: 6  IKLAVIPAVLVALLSYIFISRQTNMIQVPVAKNLIHQGEIIDDNDITFLKLPSYALPPGT 65

Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
              + +VG       +        V+   YV
Sbjct: 66 VKEKEQLVGKRAGVTRVAGDFFYDDVIKSVYV 97


>gi|291486232|dbj|BAI87307.1| hypothetical protein BSNT_05583 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 592

 Score = 36.4 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V  +  I  GE++   +    +  N N         +D    V    L  +  +  + + 
Sbjct: 278 VTANRNIKKGEIITLEKTSYKRCGNENA--LMPLQAEDAFPQVATADLSLNQPVTPNDIK 335

Query: 89  RPYV 92
           +P +
Sbjct: 336 KPRI 339


>gi|222530414|ref|YP_002574296.1| hypothetical protein Athe_2455 [Caldicellulosiruptor bescii DSM
          6725]
 gi|222457261|gb|ACM61523.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
          6725]
          Length = 194

 Score = 36.4 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 4  VRFLLFFSLYVLSLDSLFASVIGHAV---VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
          ++  +  ++ V  L  +F S   + +   V   +I+ GE++N++ +  +++ +  +    
Sbjct: 6  IKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNLIHQGEIINDNDITFLKLPSYALPRGV 65

Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
              + +VG       +        V+   YV
Sbjct: 66 IKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYV 97


>gi|184200331|ref|YP_001854538.1| hypothetical protein KRH_06850 [Kocuria rhizophila DC2201]
 gi|183580561|dbj|BAG29032.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 223

 Score = 36.4 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 4/107 (3%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
            +     V  +  + AG  L    L   Q   +        S  +  G  +   L P   
Sbjct: 46  GARTAPVVTAAHEVPAGTSLGAGDLAVSQFPEALAPTGAYASPAEAQGQTSAVALTPGQP 105

Query: 82  IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
           +  S +  P V++ G           + +S   + L     GD + V
Sbjct: 106 VTSSTVLGPGVLT-GQPTGTTAAT--VRVSDPAV-LRHVRPGDAVDV 148


>gi|167584956|ref|ZP_02377344.1| Flp pilus assembly CpaB [Burkholderia ubonensis Bu]
          Length = 280

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +    V +  +N GE +  ++++ +     ++        K + G V R  L     +
Sbjct: 34  SAVTQVAVATTDLNLGEPIGPAQIRTISWPTGSVPPGAFTDTKSLEGRVVRTSLARGEPV 93

Query: 83  PLSVLHR 89
             + L  
Sbjct: 94  LEAKLAP 100


>gi|89897409|ref|YP_520896.1| hypothetical protein DSY4663 [Desulfitobacterium hafniense Y51]
 gi|89336857|dbj|BAE86452.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 286

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 18/149 (12%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     +  L +   S     V     I AG+ + +   + ++V   N+  +   
Sbjct: 26  CIVLSLVICFALTPLFNQSVSQKASVVRVVKEIKAGDAITKDMFQTVEVGEYNLPEDVIK 85

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
               V+G      L+P   I  + L             +   +  +++S           
Sbjct: 86  QQDSVLGKYAVADLVPGDYILSAKLSDTPASENAYLYNLSGDKQAISVS----------- 134

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
                +KN   G  +SG ++    V V+ 
Sbjct: 135 -----IKNFAGG--LSGKLISGDIVSVIA 156


>gi|313902408|ref|ZP_07835811.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
          13965]
 gi|313467339|gb|EFR62850.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
          13965]
          Length = 302

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 7/94 (7%)

Query: 1  MDCVRFLLFFSLYVLSLDS-------LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN 53
          M  + +    SL V  L         L A+     VV +  + A   +    +  + +  
Sbjct: 1  MPRMSWRAAASLGVALLAGTTAYLIYLDATASLPVVVATRPLRAPLNVEADMVSVVPLPA 60

Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
          + +          V+G V RR +     +  + +
Sbjct: 61 AAVHPRAVGDPSRVIGHVLRRDVEAGEPLLEADV 94


>gi|284802136|ref|YP_003414001.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5578]
 gi|284995278|ref|YP_003417046.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5923]
 gi|284057698|gb|ADB68639.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5578]
 gi|284060745|gb|ADB71684.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5923]
          Length = 284

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 18/149 (12%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V  +  I  G+ + +  ++ ++V + N+  +   
Sbjct: 14  CIVLSLIICFAVTPLFNKGMSQKTEIVRVTKDIKIGDEITKDMVQIVEVGSYNLPEDVVK 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
           + + V+G      ++P   I  S +             +   +  M++S           
Sbjct: 74  NTETVLGKFASADMVPGDYIISSKIAAEPAAENAYLYNLTGEKQAMSVS----------- 122

Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
                VK+  TG  +SG +V    V ++ 
Sbjct: 123 -----VKSFATG--LSGKLVSGDIVSIIA 144


>gi|260904284|ref|ZP_05912606.1| SAF domain-containing protein [Brevibacterium linens BL2]
          Length = 209

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 23/74 (31%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +  +  G  L    L  ++     +      S+ D     T   L     +  S + 
Sbjct: 52  VVANRNLPPGSQLRTQDLTLVEFPARLVPDKAFTSVSDADHKRTSAGLSKGSPLTQSAVL 111

Query: 89  RPYVISRGAKVRII 102
               +  G+   ++
Sbjct: 112 DQQALPDGSTDLLM 125


>gi|18075741|emb|CAD11293.1| sialic acid synthase [Helicobacter pylori]
 gi|18075745|emb|CAD11296.1| sialic acid synthase [Helicobacter pylori]
          Length = 127

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
           I  GE L E+ +K ++         Y    K+++G    + L  +  +    + RP  +
Sbjct: 73  IQKGEALTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLSADDIERPLQV 127


>gi|118474466|ref|YP_892689.1| sialic acid synthase [Campylobacter fetus subsp. fetus 82-40]
 gi|118413692|gb|ABK82112.1| sialic acid synthase [Campylobacter fetus subsp. fetus 82-40]
          Length = 340

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           I  GE+L    ++ ++  N      Y     +++G   ++ L   + + L  + 
Sbjct: 291 IKKGEILTPQNIRSIRPNNGLHPKFY----DEILGKTAKKDLEFGYPLSLDDIR 340


>gi|218710407|ref|YP_002418028.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32]
 gi|218323426|emb|CAV19603.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32]
          Length = 279

 Score = 36.4 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 22/64 (34%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV S  I AG ++ E  L    +    I  N      ++VG V    +    V+    
Sbjct: 75  PVVVASQEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVANTIYAGEVLHKMR 134

Query: 87  LHRP 90
              P
Sbjct: 135 FTIP 138


>gi|298345610|ref|YP_003718297.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC
           43063]
 gi|304390701|ref|ZP_07372654.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315657893|ref|ZP_07910773.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|298235671|gb|ADI66803.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC
           43063]
 gi|304326457|gb|EFL93702.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315491690|gb|EFU81301.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 198

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 12  LYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           L V    +LF         VV    + AG  +    ++   +  S +  ++      V+G
Sbjct: 20  LAVFVAVTLFLPEKAAATVVVVKHEVCAGCEITAQDVRLSALAPSAVPQDHFQKADRVIG 79

Query: 70  LVTRRVLLPDHVIPLSVLHRPYV 92
                 L    V+  ++L    V
Sbjct: 80  KTAAVSLTSGTVLQPALLVENAV 102


>gi|317122041|ref|YP_004102044.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
          12885]
 gi|315592021|gb|ADU51317.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
          12885]
          Length = 284

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 23/70 (32%)

Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
          L A+     VV +  + A   +    +    V  + +          VVG V RR +   
Sbjct: 27 LDATASLPVVVATQALQAPLKIEPGMVAVSHVPAAAVHPEAVSDPAAVVGRVLRRDVEAG 86

Query: 80 HVIPLSVLHR 89
            +  + +  
Sbjct: 87 EPLLAADVAA 96


>gi|296156488|ref|ZP_06839326.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
 gi|295893087|gb|EFG72867.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
          Length = 269

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%)

Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
          + S  ++     VV +  IN G+ +    LK  +  ++++       I+ + G V +  L
Sbjct: 20 MVSQSSNATTKVVVAATDINLGQRIGPDFLKLTEWPSNSVPPGSFTDIQKLDGRVLKESL 79

Query: 77 LPDHVI 82
          L    +
Sbjct: 80 LHGEPV 85


>gi|168187390|ref|ZP_02622025.1| sialic acid synthase [Clostridium botulinum C str. Eklund]
 gi|169294695|gb|EDS76828.1| sialic acid synthase [Clostridium botulinum C str. Eklund]
          Length = 352

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
             V   ++V S  I  GE++ E  L   +   + +   Y    KD++G      +  D  
Sbjct: 289 MKVARKSIVASKNIKKGEIITEKHLDYKR-PGTGLAPKYY---KDIIGKRASIDIETDMQ 344

Query: 82  IPLSVLHR 89
           I   ++ R
Sbjct: 345 ITFDLVER 352


>gi|320533999|ref|ZP_08034557.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133787|gb|EFW26177.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 235

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           +     I AG+V+++  L    V++       A  I  VVG   R  +    ++  S L 
Sbjct: 73  LAAKDTIKAGQVIDKEDLVSASVSSDLTTLVRADQIDQVVGRTARVEISKGQLLDTSQLA 132

Query: 89  -RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
             P        V +    G                GD + V +I +  ++
Sbjct: 133 TDPVPGGDLQVVGVSANAGRFPAGGL-------QPGDKVDVVDIGSQNVI 175


>gi|257790303|ref|YP_003180909.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
 gi|325830168|ref|ZP_08163625.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
 gi|257474200|gb|ACV54520.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
 gi|325487635|gb|EGC90073.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
          Length = 215

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 20/61 (32%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V    I AGE ++ S ++        +      S  DVVG      +L   V+       
Sbjct: 52  VAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSDDVVGKKASSTILAGEVLSERRFRD 111

Query: 90  P 90
            
Sbjct: 112 A 112


>gi|218290612|ref|ZP_03494714.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218239396|gb|EED06593.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 267

 Score = 36.4 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
             + +V+   +     +  A V +  +  GEV+    +   +V  + +           V
Sbjct: 28  LVTAFVIERVATHKVPMAMAFVAAHDLTVGEVIGPKDVTRTKVPVATLPPGAMTVS--PV 85

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG----NMTISTAGIALSDASIGD 124
           G +    +    V+    L R   ++    V  +         +T+ST  + ++D S+G 
Sbjct: 86  GKMVTSPVYQGQVLVGGDLGRMGGVN---GVMRLYGTQTRAYPLTLSTQSVPMNDVSVGQ 142

Query: 125 VIAV 128
            + V
Sbjct: 143 AVDV 146


>gi|307726374|ref|YP_003909587.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
 gi|307586899|gb|ADN60296.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
          Length = 278

 Score = 36.4 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V +  ++ G+ LN + ++ +    +++        K + G V R  L P   
Sbjct: 33  SSAVTPVAVVTAEVSLGQPLNANMIRTVNWPTASVPPGAFKDPKALDGRVVRTSLEPGEP 92

Query: 82  IPLSVLHRP 90
           +  S L   
Sbjct: 93  VIESKLAPQ 101


>gi|206891038|ref|YP_002248324.1| CMP-NeuNAc synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742976|gb|ACI22033.1| CMP-NeuNAc synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 345

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V    I AGE++ E  +   +   + I   +   +  ++G   +R +  + ++    
Sbjct: 284 RSIVSLSDIKAGEIITEDMI-WSKRPGTGIPSYF---MDKIIGAKAKRFIPANTLLSWDD 339

Query: 87  LH 88
           + 
Sbjct: 340 IE 341


>gi|289451029|gb|ADC93945.1| spore coat polysaccharide biosynthesis protein E [Leptospira
           interrogans serovar Autumnalis]
 gi|289451113|gb|ADC94028.1| N-acetyl neuramic acid synthetase NeuB [Leptospira interrogans
           serovar Grippotyphosa]
          Length = 331

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           + ++I   VV  V +   E ++  +L   +    N    Y  +++ V   + RR +  + 
Sbjct: 268 YRNMIRRHVVSKVDLKKDEKIDSGKLVLKRSAIEN----YIDNLEFVYEKIARRDIRANT 323

Query: 81  VIPLSVL 87
            I    +
Sbjct: 324 PITKEDI 330


>gi|241203192|ref|YP_002974288.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857082|gb|ACS54749.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 342

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G +++    I  GE L   +L         I          V+G   +R +     I  
Sbjct: 282 LGKSIIAYSDIRVGEELTLDKLSGRIFNTHYIP---VRESNKVLGKTVKRDIAKGEPIQY 338

Query: 85  SVLH 88
           S   
Sbjct: 339 SDFG 342


>gi|317122047|ref|YP_004102050.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
           12885]
 gi|315592027|gb|ADU51323.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
           12885]
          Length = 236

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 9/93 (9%)

Query: 6   FLLFFSLYVLSLDSLFASVIG---------HAVVPSVVINAGEVLNESRLKEMQVTNSNI 56
             +   L V  L + +  V             VV +  + A   L    L   QV    +
Sbjct: 12  LPVLVGLAVTVLVAFYIRVPAGQAESGPRVPVVVATRPVPAQTRLEADMLAVRQVPADLV 71

Query: 57  RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
                  ++D VG VT+  L     +  S L R
Sbjct: 72  GRGAIGRLEDAVGKVTKVPLAEGEFVLASKLAR 104


>gi|148656324|ref|YP_001276529.1| SAF domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568434|gb|ABQ90579.1| SAF domain [Roseiflexus sp. RS-1]
          Length = 304

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 28/83 (33%), Gaps = 1/83 (1%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66
           +  SL   +   + +      V+ +  I     +    L  +++     ++       + 
Sbjct: 30  IMTSLAAAAYGYIESRRTERVVIAARDIPYAAQITVDDLAVIELPLHRPVQVAGITDPQA 89

Query: 67  VVGLVTRRVLLPDHVIPLSVLHR 89
           V+G    R +  + ++   +L  
Sbjct: 90  VIGQYATRQIGMNDLLNPGMLAA 112


>gi|299067806|emb|CBJ39017.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 295

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S      V +V +N G+ L+   ++ +    +++          + G VTR  L P   +
Sbjct: 41  SGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPV 100

Query: 83  PLSVLHR 89
             S L  
Sbjct: 101 LESKLTP 107


>gi|323139438|ref|ZP_08074487.1| multi-sensor signal transduction histidine kinase [Methylocystis
           sp. ATCC 49242]
 gi|322395309|gb|EFX97861.1| multi-sensor signal transduction histidine kinase [Methylocystis
           sp. ATCC 49242]
          Length = 776

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 42  NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
             + LK  +            +I +++   T + L    ++  + L +  +++RG   + 
Sbjct: 568 TATYLKVARRLLERPPQEAGTNIVELIDKATIQTLRAGKIV--NSLRQ--LVARGEPDKT 623

Query: 102 ILTQGNMTISTAGIALSDASIGD-VIAVKNIDTGVMVSGSVVDTGTVRVVV 151
           +++   + ++T    L+D +  D  I ++   +   V         V V++
Sbjct: 624 LVSVHELILNTYDSMLADGAKTDAQIRLERNASRDDVVADRAQLQQVLVIL 674


>gi|315655932|ref|ZP_07908830.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC
          51333]
 gi|315489996|gb|EFU79623.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC
          51333]
          Length = 187

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%)

Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
          +V    + AG  +    ++ +        G Y    +   G V  + +    +IP + L 
Sbjct: 22 LVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGELQEGSVVVQTIAGGQLIPKASLS 81

Query: 89 R 89
          +
Sbjct: 82 Q 82


>gi|119961944|ref|YP_948401.1| hypothetical protein AAur_2686 [Arthrobacter aurescens TC1]
 gi|119948803|gb|ABM07714.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 214

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV-GLVTRRVLLPDH 80
           A            I  G+V+ E+ L  ++V   ++  +Y      V  G V  + +  + 
Sbjct: 43  ADRTTQVYTAREDIAVGQVVTEADLSIVKVRLDDVESSYVTVENGVAEGKVALQRVAKNQ 102

Query: 81  VIPLSVLHRPYVISR 95
           ++P   L  P  ++R
Sbjct: 103 LVPQESLGVPDALNR 117


>gi|163856620|ref|YP_001630918.1| N-acetylneuraminate synthase [Bordetella petrii DSM 12804]
 gi|163260348|emb|CAP42650.1| N-acetylneuraminate synthase [Bordetella petrii]
          Length = 351

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 10/60 (16%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNY---AHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
             + AGE + E  ++       ++R  +      + DVVG    R +  +  +    L  
Sbjct: 299 KPLQAGETITEDAVR-------SVRPGFGLPPKQLDDVVGRKVGRDIAANTPVRAQDLRD 351


>gi|228924281|ref|ZP_04087535.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228835388|gb|EEM80775.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus
          thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 331

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
          V  + I  GE++  +++        N         ++++  +    L     +   V+  
Sbjct: 17 VTKIDIKKGEIITANKIAMELDVVENALNQL--EAEELLPQIALYNLSAGAPLSKEVIEP 74

Query: 90 PYVI 93
          P V+
Sbjct: 75 PKVV 78


>gi|256372054|ref|YP_003109878.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008638|gb|ACU54205.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331]
          Length = 237

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV +  I AG  +  + L    +T          ++ D VG      + P  ++  S++
Sbjct: 61  GVVVTRPIPAGATIERADLGLASITVPQAVRATLLAVDDAVGRTAAVTIAPGTLLERSMV 120

Query: 88  HRPY 91
             P 
Sbjct: 121 LGPR 124


>gi|220913319|ref|YP_002488628.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
 gi|219860197|gb|ACL40539.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
          Length = 242

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 23/104 (22%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            A+  +  + AG  +  S L  ++V    +         +  G      L    ++    
Sbjct: 69  TALSAARDLPAGTAVTASDLVPVRVPPGLLSEGVLSGQAEAAGKQLATPLRKGQLVTDVQ 128

Query: 87  LHRP-----------------------YVISRGAKVRIILTQGN 107
           L  P                        ++S G  V ++LT GN
Sbjct: 129 LLGPGLLTGTPPGSAAVPLRMADASSIQLVSPGQLVNVVLTSGN 172


>gi|46580523|ref|YP_011331.1| hypothetical protein DVU2118 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449942|gb|AAS96591.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234262|gb|ADP87116.1| Flp pilus assembly protein CpaB [Desulfovibrio vulgaris RCH1]
          Length = 272

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +V +  G  +   +LK     +++         K +VG V    +    VI  + L 
Sbjct: 45  VVAAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104

Query: 89  RPYVISRGAKVRI 101
                S G    I
Sbjct: 105 PADATSGGVSTMI 117


>gi|146296447|ref|YP_001180218.1| hypothetical protein Csac_1426 [Caldicellulosiruptor
          saccharolyticus DSM 8903]
 gi|145410023|gb|ABP67027.1| hypothetical protein Csac_1426 [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 194

 Score = 36.0 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 4  VRFLLFFSLYVLSLDSLFASVIGHAV---VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
          ++  +  ++ V  L  +F S   + +   V    I+ GE++++S +  +++ +  +    
Sbjct: 6  IKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNFIHQGEIIDDSDITFLKLPSYALPQGV 65

Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
              + +VG       +        V+   YV
Sbjct: 66 IKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYV 97


>gi|296329249|ref|ZP_06871750.1| N-acylneuraminate-9-phosphate synthase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296153605|gb|EFG94422.1| N-acylneuraminate-9-phosphate synthase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 508

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           I  GEV+ E+ +K ++ +N      Y     +++G    R L     +    +  
Sbjct: 454 IKKGEVITENNIKSVRPSNGISPKFYY----EIIGKKVNRDLEFGTPLLFEYIEE 504


>gi|154250525|ref|YP_001411349.1| SAF domain-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154154475|gb|ABS61692.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 317

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 20  LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
           L A      +V +  +  G+ ++E+ L   ++      G++A   +  +G V    +   
Sbjct: 69  LAAENAVTVLVAARDVVRGQRISEADLGLRRMEGPAPSGSFA-DAQSAIGRVATDDIRSS 127

Query: 80  HVIPLSVLHRPYV 92
            +I    L     
Sbjct: 128 QIIFQQALSSEPA 140


>gi|328954938|ref|YP_004372271.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2]
 gi|328455262|gb|AEB06456.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2]
          Length = 223

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           V +  I  GE L+E+ ++  +   S +    A S++DV G      +    V+      
Sbjct: 52  VATRTIEPGETLDETNVQVKEWVASLLPQGAATSLRDVAGTRVTSRVPSHAVLCPVYTE 110


>gi|119961714|ref|YP_948564.1| Flp pilus assembly protein [Arthrobacter aurescens TC1]
 gi|119948573|gb|ABM07484.1| putative Flp pilus assembly protein CpaB family [Arthrobacter
           aurescens TC1]
          Length = 269

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
           R  +   L V +  ++             VV +  +  G  L ES L  + V        
Sbjct: 70  RLAVALLLCVAAGIAVHQLTPASEQRVSVVVAARDLPTGTSLTESDLTSVGVPPDLALSG 129

Query: 60  YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99
             +SI  +VG      L    +   S L  P +++ GA V
Sbjct: 130 ALNSIGTLVGRQLASPLGKGQIPTESSLLGPGLLT-GAPV 168


>gi|37680845|ref|NP_935454.1| Flp pilus assembly protein CpaB [Vibrio vulnificus YJ016]
 gi|37199594|dbj|BAC95425.1| Flp pilus assembly protein CpaB [Vibrio vulnificus YJ016]
          Length = 248

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           + ++ I AG V+    L    +  S    +     K++VG +    + P  +I    L  
Sbjct: 48  IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107

Query: 90  P 90
           P
Sbjct: 108 P 108


>gi|296134297|ref|YP_003641544.1| Flp pilus assembly protein CpaB [Thermincola sp. JR]
 gi|296032875|gb|ADG83643.1| Flp pilus assembly protein CpaB [Thermincola potens JR]
          Length = 257

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 6/79 (7%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD-HVIPLS 85
             VV +V I A  V+    +    V    +  N     + V+G V+   +     V+   
Sbjct: 39  KVVVANVNIPARTVITGDMVSVKDVPEEFVHPNAVLDEEQVIGFVSGSDISAGEQVLREK 98

Query: 86  VLHRPYVISRGAKVRIILT 104
           +L        G  V +   
Sbjct: 99  ILR-----KEGNPVSLSYQ 112


>gi|45187616|ref|NP_983839.1| ADL257Cp [Ashbya gossypii ATCC 10895]
 gi|44982354|gb|AAS51663.1| ADL257Cp [Ashbya gossypii ATCC 10895]
          Length = 410

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 13/80 (16%)

Query: 77  LPDH-----VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI-ALSDASIGDVIAVKN 130
            P       V  ++    P  +  G  +        +T    G  AL     GD + +  
Sbjct: 240 QPGQIPGDVVFVVNEQEHPRFVRNGDNLHYEAEIDLLTAIAGGQFALEH-VSGDWLKID- 297

Query: 131 IDTGVMVSGSVVDTGTVRVV 150
                +V G V+  G V+V+
Sbjct: 298 -----IVPGEVIAPGMVKVI 312


>gi|320155488|ref|YP_004187867.1| flp pilus assembly protein RcpC/CpaB [Vibrio vulnificus MO6-24/O]
 gi|319930800|gb|ADV85664.1| flp pilus assembly protein RcpC/CpaB [Vibrio vulnificus MO6-24/O]
          Length = 248

 Score = 36.0 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           + ++ I AG V+    L    +  S    +     K++VG +    + P  +I    L  
Sbjct: 48  IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107

Query: 90  P 90
           P
Sbjct: 108 P 108


>gi|312126639|ref|YP_003991513.1| SAF domain-containing protein [Caldicellulosiruptor
          hydrothermalis 108]
 gi|311776658|gb|ADQ06144.1| SAF domain protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 208

 Score = 36.0 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 8  LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
          L F+ Y L  ++         +V    I AG  +   +L   +V       + A + K +
Sbjct: 19 LAFAEYYLLTNTANKPQYQLIIVAKQDIPAGAQITLDKLSVARVDV-RTPVHAATTRKQI 77

Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89
          +G      +     I    L  
Sbjct: 78 LGRYALYDIKAGEPIIPEHLTD 99


>gi|27365105|ref|NP_760633.1| Flp pilus assembly protein CpaB [Vibrio vulnificus CMCP6]
 gi|27361251|gb|AAO10160.1| Flp pilus assembly protein CpaB [Vibrio vulnificus CMCP6]
          Length = 248

 Score = 36.0 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           + ++ I AG V+    L    +  S    +     K++VG +    + P  +I    L  
Sbjct: 48  IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107

Query: 90  P 90
           P
Sbjct: 108 P 108


>gi|261885916|ref|ZP_06009955.1| sialic acid synthase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 231

 Score = 36.0 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           I  GE+L    ++ ++  N      Y     +++G   ++ L   + + L  + 
Sbjct: 182 IKKGEILTPQNIRSIRPNNGLHAKFY----DEILGKTAKKDLEFGYPLSLDDIR 231


>gi|170049890|ref|XP_001858599.1| vacuolar protein sorting-associated protein [Culex quinquefasciatus]
 gi|167871568|gb|EDS34951.1| vacuolar protein sorting-associated protein [Culex quinquefasciatus]
          Length = 3259

 Score = 36.0 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 82   IPLSVLHRPYVISR--GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
            I  +    PY++    G  ++I     +  I  +   L      ++IA++   +  + S 
Sbjct: 1892 IVKTETQAPYMVQNDTGQDIKINFVGSDFVIQAS--HLQSGREDELIAIEQTGSQEVTSC 1949

Query: 140  SVVDTGT 146
             V+  G 
Sbjct: 1950 IVMPNGR 1956


>gi|313902402|ref|ZP_07835805.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
           13965]
 gi|313467333|gb|EFR62844.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
           13965]
          Length = 236

 Score = 35.6 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
            V  L+ F + V + ++     +   VV +  + A   L    L   QV    +      
Sbjct: 19  AVTILVAFYVRVPAGEAGKEPRV-PVVVATRPVPAQTPLQADMLAVRQVPADVVGRGAVG 77

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHR 89
            I++ VG VT+  L     +  S L R
Sbjct: 78  RIEEAVGKVTKVPLAEGEFVLTSKLAR 104


>gi|168704728|ref|ZP_02737005.1| chaperone protein HscC [Gemmata obscuriglobus UQM 2246]
          Length = 580

 Score = 35.6 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRV 75
           LD+  +  +  A +P   +     L   ++ E+ +     R       + +++G   RR 
Sbjct: 276 LDAWVSPTLARAELPVRRVLGDARLTRDQIDEVILVGGATRMPLVVSRVTELLGKEPRRR 335

Query: 76  LLPDHVIPLSVLHRPYVISRGAKV 99
           L PD V+ L    +  ++ R A V
Sbjct: 336 LNPDEVVALGAAVQAGLVGRAAAV 359


>gi|260776716|ref|ZP_05885611.1| flp pilus assembly protein RcpC/CpaB [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607939|gb|EEX34204.1| flp pilus assembly protein RcpC/CpaB [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 247

 Score = 35.6 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  I AG V+ E  L    +           S ++++G V    + P  +I  + L  P
Sbjct: 49  AAQEIPAGSVIGEQHLTSKLLEKDWRDEFQFTSSEELIGQVVATSIFPGEIINQNRLTVP 108


>gi|322419945|ref|YP_004199168.1| Flp pilus assembly protein CpaB [Geobacter sp. M18]
 gi|320126332|gb|ADW13892.1| Flp pilus assembly protein CpaB [Geobacter sp. M18]
          Length = 308

 Score = 35.6 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%)

Query: 17  LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
           +D   A      VV +  I  G  ++E +LK       +I    A  +K +VG V  R +
Sbjct: 33  MDMTKAVQPQTLVVAAADIPIGGTISEPQLKTTSWPKDSIPPGSAADVKSLVGRVAIRPI 92

Query: 77  LPDHVIPLSVLHR 89
                +    L  
Sbjct: 93  SNGDAVTEQKLKP 105


>gi|17545375|ref|NP_518777.1| pilus assembly transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17427667|emb|CAD14186.1| probable pilus assembly cpab transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 288

 Score = 35.6 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S      V +V +N G+ L+   ++ +    +++          + G VTR  L P   +
Sbjct: 34  SGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPV 93

Query: 83  PLSVLHR 89
             S L  
Sbjct: 94  LESKLTP 100


>gi|33593024|ref|NP_880668.1| hypothetical protein BP1995 [Bordetella pertussis Tohama I]
 gi|33563399|emb|CAE42275.1| putative membrane protein [Bordetella pertussis Tohama I]
 gi|332382436|gb|AEE67283.1| hypothetical protein BPTD_1965 [Bordetella pertussis CS]
          Length = 313

 Score = 35.6 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I AG+ L    LK  +       G      + ++G + R+ +     +   +
Sbjct: 50  PVVVAGKPIAAGDRLAADLLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107

Query: 87  LHR 89
           L R
Sbjct: 108 LAR 110


>gi|167747677|ref|ZP_02419804.1| hypothetical protein ANACAC_02398 [Anaerostipes caccae DSM 14662]
 gi|239625012|ref|ZP_04668043.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|167653039|gb|EDR97168.1| hypothetical protein ANACAC_02398 [Anaerostipes caccae DSM 14662]
 gi|239521398|gb|EEQ61264.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 263

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+ +    ++ ++V + N+      + ++V+G      + P   I  S +       
Sbjct: 46  IKIGDKITGDMVRTVEVGSLNLPSEVMKNKENVIGKYASADMAPGDYIINSKVADEPAAE 105

Query: 95  RGAKVRIILTQGNMTISTAGIALS-DASI--GDVIAV 128
                 +   +  +++S    A      +  GD+++V
Sbjct: 106 NAYLYNLSGEKQAISVSVKSFATGLSGKLKSGDIVSV 142


>gi|197117447|ref|YP_002137874.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem]
 gi|197086807|gb|ACH38078.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem]
          Length = 291

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           L +S     + S  A+     VV +V I  G  +  ++LK       +I    A  I+ V
Sbjct: 24  LAYSFLQQEVKSAKAAQPQRIVVAAVDIPIGTAITPAQLKVASWPKDSIPPGSARGIEAV 83

Query: 68  VGLVTRRVLLPDHVIPLSVLHR 89
              V  R +     +  + L  
Sbjct: 84  ANRVAIRPITGGDAVTEAKLKP 105


>gi|145297253|ref|YP_001140094.1| sialic acid synthase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850025|gb|ABO88346.1| sialic acid synthase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 348

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           I AGEVL  + +K ++        +Y      ++G    R +  +  + 
Sbjct: 296 IAAGEVLTAAHIKSVRPALGLPPADY----DRLIGKRVSRDMAANQPLS 340


>gi|307265848|ref|ZP_07547398.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919123|gb|EFN49347.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 266

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 18/112 (16%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
            +  +  G+ L            S   G     +  + GL +  ++ P  V+ +      
Sbjct: 28  ATYTVKPGDTL---------WGISQKYGTTYTKLMSLNGLQST-IIYPGQVLQVPGSDNT 77

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA------VKNIDTGVM 136
           YV+ +G  + +I  +  +T+     A  +    D+I       + N  +   
Sbjct: 78  YVVQKGDSLYLIALKYGITVDMLKSA--NGYKSDIIYPGQVFIIPNASSNRT 127


>gi|226310155|ref|YP_002770049.1| hypothetical protein BBR47_05680 [Brevibacillus brevis NBRC 100599]
 gi|226093103|dbj|BAH41545.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 279

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 10/128 (7%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
            +A +PS  +     +   +L   ++       +Y      +   VT   L    +I  +
Sbjct: 46  ANADIPSRAL-----IQPDQLTVREIPKKYADDSYVIDKASLKNQVTIVPLSKGDIITKN 100

Query: 86  VLHRPYVIS-RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
           ++    V+     ++  + +  N+       AL      D+I + +  +G  V+   +  
Sbjct: 101 IMKPANVVRDENNRLVTVFSSNNIVFDQELEALDRV---DII-ISHEVSGKPVTEVFMKD 156

Query: 145 GTVRVVVK 152
             V +V K
Sbjct: 157 VPVAMVAK 164


>gi|258512891|ref|YP_003186325.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479617|gb|ACV59936.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 677

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 113 AGIALSDA-SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
            G+A       GD + V+N    V+    V   G  RVV
Sbjct: 579 LGVAAERGIQDGDWVRVRNKKASVIARARVQAEGHPRVV 617


>gi|242309883|ref|ZP_04809038.1| sialic acid synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523884|gb|EEQ63750.1| sialic acid synthase [Helicobacter pullorum MIT 98-5489]
          Length = 336

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 10/88 (11%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
           V  LL    Y LS  S    V   ++     I  GE + E++++       +IR  Y   
Sbjct: 256 VEELLGVESYELSQKSKEGRVFMRSLFVVEDIAKGERIKENQIR-------SIRPGYGIP 308

Query: 64  IK---DVVGLVTRRVLLPDHVIPLSVLH 88
            K    VVG   ++ L     +      
Sbjct: 309 PKMKYQVVGKKAKKALKRGEPLSFGDWE 336


>gi|148976663|ref|ZP_01813350.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3]
 gi|145964014|gb|EDK29272.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3]
          Length = 249

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV S  I AG V+ E  L    +    I  N     ++++G V    +    V+    
Sbjct: 45  PVVVASQEIEAGTVIEEQFLTTKLMEVDWINENNYSDKEELIGKVVANTIYAGEVLHKLR 104

Query: 87  LHRP 90
              P
Sbjct: 105 FTVP 108


>gi|33596968|ref|NP_884611.1| hypothetical protein BPP2375 [Bordetella parapertussis 12822]
 gi|33566419|emb|CAE37672.1| putative membrane protein [Bordetella parapertussis]
          Length = 313

 Score = 35.6 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I AG+ L    LK  +       G      + ++G + R+ +     +   +
Sbjct: 50  PVVVAGKPIAAGDRLAAELLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107

Query: 87  LHR 89
           L R
Sbjct: 108 LAR 110


>gi|94264703|ref|ZP_01288484.1| N-acylneuraminate-9-phosphate synthase [delta proteobacterium
           MLMS-1]
 gi|93454869|gb|EAT05116.1| N-acylneuraminate-9-phosphate synthase [delta proteobacterium
           MLMS-1]
          Length = 749

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  +  GE++    ++      S  +G   + ++++VG V  R          
Sbjct: 402 LAKSLVINQDLTQGEMIQRDMIEVK----SPGQGLQPNRLEELVGKVAVRDFRAGDFFFE 457

Query: 85  SVLHR 89
           S +  
Sbjct: 458 SDIKP 462


>gi|25027510|ref|NP_737564.1| hypothetical protein CE0954 [Corynebacterium efficiens YS-314]
 gi|259507082|ref|ZP_05749982.1| secreted protein [Corynebacterium efficiens YS-314]
 gi|23492792|dbj|BAC17764.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259165360|gb|EEW49914.1| secreted protein [Corynebacterium efficiens YS-314]
          Length = 215

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 3/94 (3%)

Query: 4   VRFLLFFSLYVLSLDSLFASVIG---HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           +R  L  +L +++      S+I      VV S  I AG  + +  L+  ++    +    
Sbjct: 18  LRRALAATLLIVAGFLFAGSLISTDPRVVVFSRDIPAGTEITDQDLELRRIPADLVPDQV 77

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
               ++ +G +T   +     +         ++S
Sbjct: 78  IRIPEEALGRITASSVTAGEWVTAPRFVGTELVS 111


>gi|146297616|ref|YP_001181387.1| SAF domain-containing protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145411192|gb|ABP68196.1| SAF domain protein [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 219

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS--V 86
           +V S+ I  GE + + +L  ++V         A +  +V+       +     I  +   
Sbjct: 43  IVASMDIKKGEKITQDKLALVRVAAPT-PIPAAKNPVEVLNKYVLYDIKRGEPIIPAKLT 101

Query: 87  LHRPYVISRGAKVRII 102
           +  P  +S+G    +I
Sbjct: 102 VKPPIDVSKGQYSMLI 117


>gi|218290594|ref|ZP_03494696.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218239378|gb|EED06575.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 261

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 3/80 (3%)

Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
          ++++  +    A+      V +  I     +  S +    +  + +  +   +    VG 
Sbjct: 19 AVWLDWMVLERANATVQVPVAAQTIPPYTTITSSDITWKSIPRNALPSDLVTNP---VGR 75

Query: 71 VTRRVLLPDHVIPLSVLHRP 90
          +T   +     I  S L   
Sbjct: 76 LTVLGVAAGDPIESSELAAQ 95


>gi|111022595|ref|YP_705567.1| hypothetical protein RHA1_ro05629 [Rhodococcus jostii RHA1]
 gi|110822125|gb|ABG97409.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 237

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 23/65 (35%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV +  +  G VL ++ ++ + +    +      ++ DV G            +    +
Sbjct: 70  VVVAARDLQPGVVLTDADVELVDLEAGTLPDGAVTALADVDGRTLAGPTRAGEALTDVRV 129

Query: 88  HRPYV 92
             P +
Sbjct: 130 LGPRL 134


>gi|326331487|ref|ZP_08197777.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
 gi|325950743|gb|EGD42793.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
          Length = 224

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 7/105 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGLVTRRVLLPDHVIP 83
               +V    I  G ++    +K +Q++           S  DV+G      +    ++ 
Sbjct: 60  TQDVLVARHTIERGSLIEADDIKRIQISADPALEALPGSSYGDVIGKKAGLDIAAGALLT 119

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
                   +   G  V        + ++T+     +   GD + V
Sbjct: 120 EEATTSSPMPPDGMSVV------GLALATSHSPAVNLRTGDRVRV 158


>gi|320107043|ref|YP_004182633.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4]
 gi|319925564|gb|ADV82639.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4]
          Length = 176

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 92  VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-----GVMVSGSVVDTG 145
            +  G  V ++  QG   I   GI+ ++  IGD I ++ I +      + +  SV   G
Sbjct: 112 AVHAGQTVDLLYEQGPAKIHLRGISEANGYIGDRIVLRPIASLGSPPELRLHASVTAEG 170


>gi|33600810|ref|NP_888370.1| hypothetical protein BB1825 [Bordetella bronchiseptica RB50]
 gi|33568410|emb|CAE32322.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 313

 Score = 35.6 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV    I AG+ L    LK  +       G      + ++G + R+ +     +   +
Sbjct: 50  PVVVAGKPIAAGDRLAADLLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107

Query: 87  LHR 89
           L R
Sbjct: 108 LAR 110


>gi|103486618|ref|YP_616179.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256]
 gi|98976695|gb|ABF52846.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256]
          Length = 345

 Score = 35.6 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 13/128 (10%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIPL 84
           +V +  +  G ++     +        +   Y       +  +VG V R  +     +  
Sbjct: 49  LVATRQLPVGTIVGPDSFRFQPWPKDLVENAYFVKEKTDVNTLVGTVVRHPITAGQPLTQ 108

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI-----GDVIAVKNIDTGVMVSG 139
             L  P    RG           M   T  ++           GD + V    T  +  G
Sbjct: 109 GALVHPN--DRGFLAA--ALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIEVEEG 164

Query: 140 SVVDTGTV 147
           S      +
Sbjct: 165 STYPDDQI 172


>gi|261837628|gb|ACX97394.1| sialic acid synthase [Helicobacter pylori 51]
          Length = 340

 Score = 35.6 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
           I  GE L E+ +K ++         Y    K+++G    + L  +  +    + RP
Sbjct: 288 IQKGETLTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLSADGIERP 339


>gi|260204206|ref|ZP_05771697.1| hypothetical protein MtubK8_07852 [Mycobacterium tuberculosis K85]
 gi|289573628|ref|ZP_06453855.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289538059|gb|EFD42637.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
          Length = 218

 Score = 35.6 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 19/58 (32%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV +  +  G VL    ++  + + + +       +  VVG           V+ 
Sbjct: 54  AEVVVAAHDLRPGTVLTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111


>gi|195166110|ref|XP_002023878.1| GL27311 [Drosophila persimilis]
 gi|194106038|gb|EDW28081.1| GL27311 [Drosophila persimilis]
          Length = 372

 Score = 35.6 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G ++V +  +  G  L  + L       + +          +VG      +  D  I  
Sbjct: 311 LGKSIVAARTLRKGLKLQLTDLAIKVSEPNGLPAEAYFD---IVGKELTDTVYEDEPIAG 367

Query: 85  SVLH 88
           +++ 
Sbjct: 368 NMVK 371


>gi|20559814|gb|AAM27589.1|AF498403_8 ORF_8; similar to NeuB family [Pseudomonas aeruginosa]
          Length = 361

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
                 VV +  I AG ++    L   +    +  G    S+ ++VG  ++R  L    +
Sbjct: 304 QAARQQVVAARDIEAGMIITRDDLTTAR----SGHGLPPTSLWELVGSTSKRAFLAGETL 359


>gi|302038298|ref|YP_003798620.1| putative n-acetylneuraminate synthase [Candidatus Nitrospira
           defluvii]
 gi|300606362|emb|CBK42695.1| putative N-acetylneuraminate synthase [Candidatus Nitrospira
           defluvii]
          Length = 348

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           VV  V I  G V+  + +  ++  +       A  +K V+G V +  +  D  I 
Sbjct: 289 VVSEVAIPRGTVITPTMV-WVKRPSPGPGAVAAKDLKKVIGKVAKTDIPKDSQIR 342


>gi|168703131|ref|ZP_02735408.1| flp pilus assembly protein [Gemmata obscuriglobus UQM 2246]
          Length = 442

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLK----EMQVTNSNIRGNYAHSIKDVV 68
           ++ +  S         VV +  +  G +L +  LK     ++     +      + +++V
Sbjct: 21  FLTAQMSAKPIEQMEVVVAAKDLPVGTMLGKEDLKAAVKIVKRPKEGLPPTVVLNPEELV 80

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVIS 94
                R +  + VI    L +  VI+
Sbjct: 81  DKRLSRPIRAEEVINSQDLSKGGVIT 106


>gi|149911410|ref|ZP_01900028.1| Flp pilus assembly protein CpaB [Moritella sp. PE36]
 gi|149805518|gb|EDM65523.1| Flp pilus assembly protein CpaB [Moritella sp. PE36]
          Length = 264

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%)

Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
          ++VI  G ++    +K   +  S    N      ++ G++ +  +  D +I L
Sbjct: 45 TMVIPIGTIIEAKHIKLKILPESMSPDNTVTDPDEIYGMIAKDTIYIDDIIRL 97


>gi|82617362|emb|CAI64274.1| NeuB family member [uncultured archaeon]
 gi|268323069|emb|CBH36657.1| conserved hypothetical protein, NeuB family [uncultured archaeon]
          Length = 360

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            ++V  V I     +    L   +   + I   +      V+G  TRR +  D +I
Sbjct: 303 RSIVAKVTIPEDTTIAADMLAFKR-PGTGISTKFV---DRVIGKKTRRRINEDEII 354


>gi|85707703|ref|ZP_01038769.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1]
 gi|85689237|gb|EAQ29240.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1]
          Length = 365

 Score = 35.6 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 22/130 (16%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
             +V +  + AG ++    +         ++  Y       +  ++G V R  +     +
Sbjct: 45  KVLVANRALPAGTIITADAMGYQMWPEELVQDAYFIEGESDMSQLLGTVVRFPVTAGEPV 104

Query: 83  PLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASI-----GDVIAVKNIDTGVM 136
               L  P     G +  +    G  M   T  ++           GD + V       +
Sbjct: 105 TQGSLVSP-----GDRGFLAAALGPGMRAVTVPVSAKTGVAGFVFPGDRVDV-------V 152

Query: 137 VSGSVVDTGT 146
           ++ +V   G 
Sbjct: 153 LTQTVSGEGR 162


>gi|317009864|gb|ADU80444.1| sialic acid synthase [Helicobacter pylori India7]
          Length = 340

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
           I  GE L E+ +K ++         Y    K+++G    + L  +  +    + RP
Sbjct: 288 IQKGEALTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLNADDIERP 339


>gi|229816461|ref|ZP_04446762.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM
           13280]
 gi|229808003|gb|EEP43804.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM
           13280]
          Length = 226

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 21  FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           +   +    V    I  G+ ++E  +K ++  +S +  +   S+ D  GLV    +    
Sbjct: 43  YGGDVTRVCVALREIEPGDEISEGNVKVVEWVSSLMPEDALTSMGDASGLVATARIPAHT 102

Query: 81  VIPLSVL---HRPYVISRGAKVRIILTQ 105
            +  +      R   + RG     + + 
Sbjct: 103 PLAKAHFLRDERVVQVPRGTVAISVASD 130


>gi|149927034|ref|ZP_01915292.1| Flp pilus assembly CpaB [Limnobacter sp. MED105]
 gi|149824255|gb|EDM83475.1| Flp pilus assembly CpaB [Limnobacter sp. MED105]
          Length = 321

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 5/102 (4%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV +V I  G+ +    LK  +             I DV+G      +     +    
Sbjct: 45  PVVVSTVEIQFGKPVTPEMLKVEKFAI--APSGAFTDIGDVIGKKPLFNIGKGLPVTNQY 102

Query: 87  LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
                V    A+VR       + +    +A +    GD + V
Sbjct: 103 FESGAV---AAEVREGYRAFALRLDENNVATAKIKAGDYVDV 141


>gi|156741391|ref|YP_001431520.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156232719|gb|ABU57502.1| SAF domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 298

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
               ++ +  +  G+ +    L  +++     I+         V+G    R +  + ++ 
Sbjct: 47  TERVIIAARDVPYGQQITIDDLAIIELPLHRPIQVAGITDPNIVIGQYATRQIGTNDLLN 106

Query: 84  LSVLHR 89
             +L  
Sbjct: 107 PGMLSP 112


>gi|167574002|ref|ZP_02366876.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis
           C6786]
          Length = 282

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S +    V ++ +N GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 33  SSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSLARGEP 92

Query: 82  IPLSVLHR 89
           +  S L  
Sbjct: 93  VLGSKLAP 100


>gi|239617658|ref|YP_002940980.1| N-acylneuraminate-9-phosphate synthase [Kosmotoga olearia TBF
           19.5.1]
 gi|239506489|gb|ACR79976.1| N-acylneuraminate-9-phosphate synthase [Kosmotoga olearia TBF
           19.5.1]
          Length = 355

 Score = 35.2 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++V    I AG+++ E+ ++  +         Y      V+G    R +  D ++    
Sbjct: 296 RSLVAKRFIPAGKIIEETDIEIKRPGTGVSPLLY----DKVIGSKATRDIGEDEILQFGD 351

Query: 87  LH 88
             
Sbjct: 352 FR 353


>gi|319945759|ref|ZP_08020010.1| adenine-specific methyltransferase [Streptococcus australis ATCC
           700641]
 gi|319748119|gb|EFW00362.1| adenine-specific methyltransferase [Streptococcus australis ATCC
           700641]
          Length = 321

 Score = 35.2 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 2   DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
           +C R L +  L +  L    A+ +   +   V    G+ +    LKE  V  S++   Y 
Sbjct: 134 NCQRSLDYLGLEIDDLLIDLAASMAEVMKADVNFAQGDAIRPQVLKESDVIISDLPVGYY 193

Query: 62  HSIKDVV 68
               D +
Sbjct: 194 --PDDAI 198


>gi|218289538|ref|ZP_03493766.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218240406|gb|EED07588.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 235

 Score = 35.2 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
             V    + A   +  + ++ ++V  S +  +   + + ++G  T + +  + V+     
Sbjct: 37  VYVARTQMPADTPIQATDVERIRVPKSEVSPDAITNAEGLIGAYTAQPVDQNQVLTALDT 96

Query: 88  HR-PYVISRGAK 98
              P+ I+ G +
Sbjct: 97  EPDPFTITPGTE 108


>gi|261420563|ref|YP_003254245.1| pseudaminic acid synthase [Geobacillus sp. Y412MC61]
 gi|319768232|ref|YP_004133733.1| pseudaminic acid synthase [Geobacillus sp. Y412MC52]
 gi|261377020|gb|ACX79763.1| pseudaminic acid synthase [Geobacillus sp. Y412MC61]
 gi|317113098|gb|ADU95590.1| pseudaminic acid synthase [Geobacillus sp. Y412MC52]
          Length = 351

 Score = 35.2 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 33  VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
             + AGE L +  ++ ++   + +   Y      ++G   +R +     + 
Sbjct: 300 RDMRAGETLTKENVRAIR-PGNGLPPKYF---DQLLGKTVKRDVKKGTPVT 346


>gi|218131533|ref|ZP_03460337.1| hypothetical protein BACEGG_03152 [Bacteroides eggerthii DSM 20697]
 gi|317474800|ref|ZP_07934074.1| NeuB family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|217986465|gb|EEC52802.1| hypothetical protein BACEGG_03152 [Bacteroides eggerthii DSM 20697]
 gi|316909481|gb|EFV31161.1| NeuB family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 346

 Score = 35.2 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
           LY+    +     +  ++  +  ++ G+++ E  +       S   G        VVG  
Sbjct: 274 LYIDPAVAAAKVKLERSIATNKALHPGDIIKEEDIHL----LSPGDGFKWADCDKVVGRQ 329

Query: 72  TRRVLLPDHVIPLSVL 87
            R+ +  + +I    +
Sbjct: 330 VRKEIPRNEIIYPDSI 345


>gi|189467418|ref|ZP_03016203.1| hypothetical protein BACINT_03806 [Bacteroides intestinalis DSM
           17393]
 gi|189435682|gb|EDV04667.1| hypothetical protein BACINT_03806 [Bacteroides intestinalis DSM
           17393]
          Length = 302

 Score = 35.2 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIDGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 281 QTIRVENSD---IVAAKVINELKIK 302


>gi|188581530|ref|YP_001924975.1| ROK family protein [Methylobacterium populi BJ001]
 gi|179345028|gb|ACB80440.1| ROK family protein [Methylobacterium populi BJ001]
          Length = 305

 Score = 35.2 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 37  AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
           AG  L+       ++     RG+YA ++  + GLV               +  P  +SR 
Sbjct: 18  AGIALDAEGTTRAEIRVPTPRGDYAGTLDAIAGLVATLERQAGTTGASVGVGMPGAVSR- 76

Query: 97  AKVRIILTQGNMTISTAGIALS-DASIGDVIAVKNIDTGVMVSGSVVDTG 145
               +I    ++ ++         A +G  + V+N    + VS +V   G
Sbjct: 77  -ATGLIKNANSVWLNGRPFPQDLAARLGRPVRVENDANCLAVSEAVDGAG 125


>gi|78358296|ref|YP_389745.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220701|gb|ABB40050.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 351

 Score = 35.2 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
            ++D  +ASV     V    I AG++L++  +   +     I    A   + V+G V +R
Sbjct: 285 PTIDFAYASV-----VAIRDIRAGDILSKDNIWVKRPGTGEI---LARDYERVLGRVAKR 336

Query: 75  VLLPDHVIPLSVLH 88
            L  +  +      
Sbjct: 337 PLQKNAQLAWDDFD 350


>gi|254478855|ref|ZP_05092220.1| NeuB family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035217|gb|EEB75926.1| NeuB family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 347

 Score = 35.2 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           +   ++V +  I  G ++NE+ L   +   + I   +   I  ++G   +  +L D ++ 
Sbjct: 287 IARKSIVAATYIPKGSIINENMLTVKR-PGTGIPPKF---IDYLIGKKAKIDILKDTILD 342

Query: 84  LSVLH 88
           LS++ 
Sbjct: 343 LSMIE 347


>gi|189189348|ref|XP_001931013.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187972619|gb|EDU40118.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 508

 Score = 35.2 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 11/94 (11%)

Query: 20  LFASVIGHAVVPSVVI--NAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
           +   +   +++P  +I   +G  + +  ++E               +  +   +  R LL
Sbjct: 347 VTLQIYSESIMPIRLIVAESGSTMTDEEVREALENLPQ-------DLTQIYNQILERTLL 399

Query: 78  PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
           P      ++     V  R     I   +  ++++
Sbjct: 400 PGQAYRANIFKFVLVAKR--PTTIHEMREALSVT 431


>gi|284029612|ref|YP_003379543.1| SAF domain-containing protein [Kribbella flavida DSM 17836]
 gi|283808905|gb|ADB30744.1| SAF domain protein [Kribbella flavida DSM 17836]
          Length = 219

 Score = 35.2 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 31  PSVVINAGEVLNESRLKEMQV--TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
               + AG  L    L  ++V  T+S   G Y  +  D+ GLV  R +     +P   
Sbjct: 60  AERDLPAGTKLTSDDLTTVRVRFTSSEAAGQYVAADADLKGLVMSRAVKAGEFVPRRA 117


>gi|167566933|ref|ZP_02359849.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis
          EO147]
          Length = 274

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%)

Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
          +S +    V ++ +N GE L  ++L+ +    +++       +K + G V R  L     
Sbjct: 25 SSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSLARGEP 84

Query: 82 IPLSVLHR 89
          +  S L  
Sbjct: 85 VLGSKLAP 92


>gi|254705714|ref|ZP_05167542.1| UxaA family hydrolase [Brucella pinnipedialis M163/99/10]
 gi|261313134|ref|ZP_05952331.1| galactarate dehydratase [Brucella pinnipedialis M163/99/10]
 gi|261302160|gb|EEY05657.1| galactarate dehydratase [Brucella pinnipedialis M163/99/10]
          Length = 514

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|254695831|ref|ZP_05157659.1| hydrolase, UxaA family protein [Brucella abortus bv. 3 str. Tulya]
 gi|261216252|ref|ZP_05930533.1| galactarate dehydratase [Brucella abortus bv. 3 str. Tulya]
 gi|260917859|gb|EEX84720.1| galactarate dehydratase [Brucella abortus bv. 3 str. Tulya]
          Length = 514

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|225629275|ref|ZP_03787308.1| UxaA family hydrolase [Brucella ceti str. Cudo]
 gi|254710946|ref|ZP_05172757.1| hydrolase, UxaA family protein [Brucella pinnipedialis B2/94]
 gi|254712580|ref|ZP_05174391.1| hydrolase, UxaA family protein [Brucella ceti M644/93/1]
 gi|254715653|ref|ZP_05177464.1| hydrolase, UxaA family protein [Brucella ceti M13/05/1]
 gi|256029329|ref|ZP_05442943.1| hydrolase, UxaA family protein [Brucella pinnipedialis M292/94/1]
 gi|256157522|ref|ZP_05455440.1| hydrolase, UxaA family protein [Brucella ceti M490/95/1]
 gi|256253501|ref|ZP_05459037.1| hydrolase, UxaA family protein [Brucella ceti B1/94]
 gi|260167581|ref|ZP_05754392.1| hydrolase, UxaA family protein [Brucella sp. F5/99]
 gi|261217402|ref|ZP_05931683.1| galactarate dehydratase [Brucella ceti M13/05/1]
 gi|261220629|ref|ZP_05934910.1| galactarate dehydratase [Brucella ceti B1/94]
 gi|261318527|ref|ZP_05957724.1| galactarate dehydratase [Brucella pinnipedialis B2/94]
 gi|261320275|ref|ZP_05959472.1| galactarate dehydratase [Brucella ceti M644/93/1]
 gi|261757003|ref|ZP_06000712.1| hydrolase [Brucella sp. F5/99]
 gi|265986328|ref|ZP_06098885.1| galactarate dehydratase [Brucella pinnipedialis M292/94/1]
 gi|265996022|ref|ZP_06108579.1| galactarate dehydratase [Brucella ceti M490/95/1]
 gi|225615771|gb|EEH12820.1| UxaA family hydrolase [Brucella ceti str. Cudo]
 gi|260919213|gb|EEX85866.1| galactarate dehydratase [Brucella ceti B1/94]
 gi|260922491|gb|EEX89059.1| galactarate dehydratase [Brucella ceti M13/05/1]
 gi|261292965|gb|EEX96461.1| galactarate dehydratase [Brucella ceti M644/93/1]
 gi|261297750|gb|EEY01247.1| galactarate dehydratase [Brucella pinnipedialis B2/94]
 gi|261736987|gb|EEY24983.1| hydrolase [Brucella sp. F5/99]
 gi|262550319|gb|EEZ06480.1| galactarate dehydratase [Brucella ceti M490/95/1]
 gi|264658525|gb|EEZ28786.1| galactarate dehydratase [Brucella pinnipedialis M292/94/1]
          Length = 514

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|157151192|ref|YP_001450109.1| pyruvate phosphate dikinase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075986|gb|ABV10669.1| pyruvate, phosphate dikinase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 873

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 62  HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
            S +D+ G+V  + ++        +     V++RG     +   G ++I      LS  S
Sbjct: 428 TSPEDIEGMVVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELSIREESKTLSCGS 484

Query: 122 I----GDVIAVKNIDTGVMVSGSV 141
           +    GD+I+V +  +G + SG +
Sbjct: 485 LTLTEGDIISV-DGSSGCIYSGEI 507


>gi|50119733|ref|YP_048900.1| hypothetical protein ECA0788 [Pectobacterium atrosepticum SCRI1043]
 gi|49610259|emb|CAG73702.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 314

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD----VVGLVTRRVLLPDHVIP 83
            +V +  ++ G+ ++ + L+  +      R       KD    ++G   R  +     + 
Sbjct: 47  VLVAAKALHPGDFIDSASLRWDETDKPVSRTFNFIRGKDSQSLLLGATLRETVAEGTPLT 106

Query: 84  LSVLHRPYVISRGAK--VRIILTQG--NMTISTAGIALSDA--SIGDVIAV 128
            +      ++       V  +L +G   +++ T+ IA +    S GD + V
Sbjct: 107 SN-----VLVKPNEPGFVAAVLRKGMRAISVPTSAIASNAGLVSAGDRVDV 152


>gi|126437236|ref|YP_001072927.1| SAF domain-containing protein [Mycobacterium sp. JLS]
 gi|126237036|gb|ABO00437.1| SAF domain [Mycobacterium sp. JLS]
          Length = 218

 Score = 35.2 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 13/103 (12%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV +  +  G  L ES ++  +   + +    A     V+G+          V+    
Sbjct: 53  DVVVAATDLTPGMDLAESDVRVERRPLTTVPDGAAKDPTAVIGMTVAGPTRRGEVLTDLR 112

Query: 87  LHRPYVIS--RGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
           L  P +     G   RI+  Q           L+D ++ D++ 
Sbjct: 113 LLGPRIAEAAAGPDARIVSLQ-----------LADGALVDLVR 144


>gi|167040069|ref|YP_001663054.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X514]
 gi|256752689|ref|ZP_05493539.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914153|ref|ZP_07131469.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561]
 gi|307724611|ref|YP_003904362.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513]
 gi|166854309|gb|ABY92718.1| cell wall hydrolase, SleB [Thermoanaerobacter sp. X514]
 gi|256748408|gb|EEU61462.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889088|gb|EFK84234.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561]
 gi|307581672|gb|ADN55071.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513]
          Length = 267

 Score = 35.2 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 25/131 (19%)

Query: 19  SLFASVIGHAVV------PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
            L ASVIG   +       +  +  G+ L            S   G     +  + GL +
Sbjct: 10  PLIASVIGGLFIFQSIFAATYTVKPGDTL---------WGISQKYGTTYTKLMSLNGLQS 60

Query: 73  RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI---AV- 128
             V+ P  V+ +      YV+ +G  + +I  +  +T+     A  +    D+I    V 
Sbjct: 61  T-VIYPGQVLQVPGSDNTYVVQKGDSLYLIALKYGITVDMLKSA--NGYKSDIIYPGQVF 117

Query: 129 ---KNIDTGVM 136
              ++  +   
Sbjct: 118 IIPRDTSSNRT 128


>gi|189234957|ref|XP_973182.2| PREDICTED: similar to CG17754 CG17754-PC [Tribolium castaneum]
          Length = 886

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 14/121 (11%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G ++V +  +  G++L    +K        I  +     KDV+G   + V+  D  I  
Sbjct: 290 LGKSLVAATTLRKGDILQHENIKIKVAEPKGIDASLL---KDVIGKHVKGVINEDESILQ 346

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA----SIGDVIAVKNIDTGVMVSGS 140
             L       +  ++ +            G          ++GDV        G ++   
Sbjct: 347 ENLDNNGKKVQAHRLVLSAASEYFAAMFTGNLRESGESEITLGDV-------NGDVLQAV 399

Query: 141 V 141
           V
Sbjct: 400 V 400


>gi|78357402|ref|YP_388851.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78219807|gb|ABB39156.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 272

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 17/60 (28%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V +  +  G  +   ++   +            S  ++ G V    +     I  + L  
Sbjct: 46  VAAADMTKGTRIRAEQITMAEFLLQTAPAGAFSSADELTGRVLASAVTAGEPITPARLVE 105


>gi|223984146|ref|ZP_03634297.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM
           12042]
 gi|223963878|gb|EEF68239.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM
           12042]
          Length = 238

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 1   MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
           +  V  L+F  +++   +      +    +    +    ++    L  + V ++ ++ + 
Sbjct: 12  LTAVLVLIFSGIFLFRRELTRRLSLVSVPISVSTLPPRHLITVDDLTWIDVPSAYLQADI 71

Query: 61  AHSIKDVVGLVTRR--VLLPDHVIPLSVLHRP 90
                ++VGL TR    +         +L  P
Sbjct: 72  LWEEAELVGLWTRLEGTIPAGSFFYQEMLDAP 103


>gi|29826723|ref|NP_821357.1| hypothetical protein SAV_183 [Streptomyces avermitilis MA-4680]
 gi|29603819|dbj|BAC67892.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 234

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 6/103 (5%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSV 86
            V  +  +  G+VL+E  L +  +          A  +  VVG      L P  ++  S 
Sbjct: 67  VVTVARDVQVGQVLSEEDLGKASIALDPAVKAVRAGDLDSVVGKRAAVELRPGSLLAPSQ 126

Query: 87  LHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIGDVIAV 128
           +    ++  G + V I L    +       AL      +++ V
Sbjct: 127 VTEDSLVKAGEQLVPIGLKSEQV----PATALVPGQKVELVHV 165


>gi|317154606|ref|YP_004122654.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2]
 gi|316944857|gb|ADU63908.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2]
          Length = 273

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 4/126 (3%)

Query: 7   LLFFSLYVLSLDSLFASV--IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           L+F     ++   + A        VV    +  G  L  + L+  Q T  +         
Sbjct: 24  LIFMWTSGVTQQPVAAPRAETVPVVVALTDLRPGIKLTPAMLETRQFTPDSRPSGAFGEP 83

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SI 122
             + G V    +  +  +  + L    VI  G    I   +  M++    +         
Sbjct: 84  GLLDGRVLGVAVGANEAVTEAKLADASVIGGGVSALIEPGKRAMSVKGNAVMGLAGFVRP 143

Query: 123 GDVIAV 128
           GD + V
Sbjct: 144 GDRVDV 149


>gi|224824212|ref|ZP_03697320.1| Flp pilus assembly protein CpaB [Lutiella nitroferrum 2002]
 gi|224603631|gb|EEG09806.1| Flp pilus assembly protein CpaB [Lutiella nitroferrum 2002]
          Length = 282

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%)

Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
               VV S+ I+ G  L+   L+ +   + +I        K + G V +  +     I 
Sbjct: 27 AAQKVVVASMDIDLGSKLSPEMLRSVDWPSGSIPEGAILDPKALDGRVLKTSVNRGEAIL 86

Query: 84 LSVLHR 89
           S L  
Sbjct: 87 ESKLAP 92


>gi|254700020|ref|ZP_05161848.1| hydrolase, UxaA family protein [Brucella suis bv. 5 str. 513]
 gi|261750503|ref|ZP_05994212.1| galactarate dehydratase [Brucella suis bv. 5 str. 513]
 gi|261740256|gb|EEY28182.1| galactarate dehydratase [Brucella suis bv. 5 str. 513]
          Length = 514

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|115526230|ref|YP_783141.1| N-acetylneuraminate synthase [Rhodopseudomonas palustris BisA53]
 gi|115520177|gb|ABJ08161.1| N-acetylneuraminate synthase [Rhodopseudomonas palustris BisA53]
          Length = 357

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
           +   VV +  +  G +L    L       + I  +       + +VG   +R +  +  I
Sbjct: 290 MVKRVVAARELKKGHMLAAEDLAFRIPVGAKITSHTLRPFEAEQIVGHALKRDIGFEEPI 349

Query: 83  PLSVLH 88
               L 
Sbjct: 350 TRVDLG 355


>gi|294776375|ref|ZP_06741854.1| conjugative transposon TraN protein [Bacteroides vulgatus PC510]
 gi|294449791|gb|EFG18312.1| conjugative transposon TraN protein [Bacteroides vulgatus PC510]
          Length = 296

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 215 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKVLVIELVEKNGGRH 274

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 275 QTIRVENSD---IVAAKVINELKIK 296


>gi|23500539|ref|NP_699979.1| UxaA family hydrolase [Brucella suis 1330]
 gi|83269337|ref|YP_418628.1| D-galactarate dehydratase/altronate hydrolase [Brucella melitensis
           biovar Abortus 2308]
 gi|161620865|ref|YP_001594751.1| galactarate dehydratase [Brucella canis ATCC 23365]
 gi|189022612|ref|YP_001932353.1| hydrolase, UxaA family [Brucella abortus S19]
 gi|237816912|ref|ZP_04595904.1| UxaA family hydrolase [Brucella abortus str. 2308 A]
 gi|254690859|ref|ZP_05154113.1| hydrolase, UxaA family protein [Brucella abortus bv. 6 str. 870]
 gi|254698640|ref|ZP_05160468.1| hydrolase, UxaA family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732087|ref|ZP_05190665.1| hydrolase, UxaA family protein [Brucella abortus bv. 4 str. 292]
 gi|256015571|ref|YP_003105580.1| hydrolase, UxaA family [Brucella microti CCM 4915]
 gi|260544594|ref|ZP_05820415.1| hydrolase [Brucella abortus NCTC 8038]
 gi|260567930|ref|ZP_05838399.1| hydrolase [Brucella suis bv. 4 str. 40]
 gi|260756438|ref|ZP_05868786.1| galactarate dehydratase [Brucella abortus bv. 6 str. 870]
 gi|260759870|ref|ZP_05872218.1| galactarate dehydratase [Brucella abortus bv. 4 str. 292]
 gi|260763109|ref|ZP_05875441.1| galactarate dehydratase [Brucella abortus bv. 2 str. 86/8/59]
 gi|294853421|ref|ZP_06794093.1| galactarate dehydratase [Brucella sp. NVSL 07-0026]
 gi|23464173|gb|AAN33984.1| hydrolase, UxaA family [Brucella suis 1330]
 gi|82939611|emb|CAJ12597.1| D-galactarate dehydratase/Altronate hydrolase,
           N-terminal:D-galactarate dehydratase/Altronate
           hydrolase, C-terminal [Brucella melitensis biovar
           Abortus 2308]
 gi|161337676|gb|ABX63980.1| Galactarate dehydratase [Brucella canis ATCC 23365]
 gi|189021186|gb|ACD73907.1| hydrolase, UxaA family [Brucella abortus S19]
 gi|237787725|gb|EEP61941.1| UxaA family hydrolase [Brucella abortus str. 2308 A]
 gi|255998231|gb|ACU49918.1| hydrolase, UxaA family [Brucella microti CCM 4915]
 gi|260097865|gb|EEW81739.1| hydrolase [Brucella abortus NCTC 8038]
 gi|260154595|gb|EEW89676.1| hydrolase [Brucella suis bv. 4 str. 40]
 gi|260670188|gb|EEX57128.1| galactarate dehydratase [Brucella abortus bv. 4 str. 292]
 gi|260673530|gb|EEX60351.1| galactarate dehydratase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676546|gb|EEX63367.1| galactarate dehydratase [Brucella abortus bv. 6 str. 870]
 gi|294819076|gb|EFG36076.1| galactarate dehydratase [Brucella sp. NVSL 07-0026]
          Length = 514

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|315501061|ref|YP_004079948.1| saf domain protein [Micromonospora sp. L5]
 gi|315407680|gb|ADU05797.1| SAF domain protein [Micromonospora sp. L5]
          Length = 222

 Score = 34.8 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIP 83
            G  +  +  ++ G  L    L  ++V+         A  + +V+GL     L P  ++ 
Sbjct: 56  TGTYLAVARPVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAAVRLTPGTLLT 115

Query: 84  LSVLHRPYVISRGAK 98
            + L    ++  G +
Sbjct: 116 PAQLTEAPLLGPGQQ 130


>gi|254703141|ref|ZP_05164969.1| hydrolase, UxaA family protein [Brucella suis bv. 3 str. 686]
 gi|261753761|ref|ZP_05997470.1| galactarate dehydratase [Brucella suis bv. 3 str. 686]
 gi|261743514|gb|EEY31440.1| galactarate dehydratase [Brucella suis bv. 3 str. 686]
          Length = 514

 Score = 34.8 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|62317360|ref|YP_223213.1| UxaA family hydrolase [Brucella abortus bv. 1 str. 9-941]
 gi|62197553|gb|AAX75852.1| hydrolase, UxaA family [Brucella abortus bv. 1 str. 9-941]
          Length = 514

 Score = 34.8 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|148558072|ref|YP_001257750.1| UxaA family hydrolase [Brucella ovis ATCC 25840]
 gi|148369357|gb|ABQ62229.1| hydrolase, UxaA family [Brucella ovis ATCC 25840]
          Length = 514

 Score = 34.8 bits (79), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D + G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|144899766|emb|CAM76630.1| NeuB [Magnetospirillum gryphiswaldense MSR-1]
          Length = 337

 Score = 34.8 bits (79), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 13  YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
            +L  +  + +    ++  +  I AG+++++  +   +       G + H +  V+G   
Sbjct: 267 RILPTEEKWRAAARKSLYAARDIAAGQIISDDDIAIRR----PADGIHPHHLDLVIGRTA 322

Query: 73  RRVLLPDHVIPLSVL 87
           R+ +    +I   ++
Sbjct: 323 RQAIACGALISWDMV 337


>gi|328545280|ref|YP_004305389.1| Flp pilus assembly CpaB [polymorphum gilvum SL003B-26A1]
 gi|326415022|gb|ADZ72085.1| Flp pilus assembly CpaB [Polymorphum gilvum SL003B-26A1]
          Length = 258

 Score = 34.8 bits (79), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 19/62 (30%), Gaps = 6/62 (9%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD------VVGLVTRRVLLPDHV 81
            +V +  I  G+ L  S +   +   + +                +VG + +  +     
Sbjct: 47  VLVATRDIRLGDHLAASDISWAEWPENVVPQGAITRQNQPDAEELMVGQIAKAPIYSGEP 106

Query: 82  IP 83
           I 
Sbjct: 107 IR 108


>gi|261252086|ref|ZP_05944659.1| flp pilus assembly protein RcpC/CpaB [Vibrio orientalis CIP 102891]
 gi|260935477|gb|EEX91466.1| flp pilus assembly protein RcpC/CpaB [Vibrio orientalis CIP 102891]
          Length = 247

 Score = 34.8 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
            +  I AG V+ E  +    +             +++VG V    + P  +I  + L  
Sbjct: 49  AAQEIFAGSVIEEQHVTSRLLEKDWRDELQFTKAEELVGQVAATTIYPGEIIHPNRLSS 107


>gi|83749639|ref|ZP_00946622.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum
           UW551]
 gi|207728107|ref|YP_002256501.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
 gi|207744157|ref|YP_002260549.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
 gi|83723700|gb|EAP70895.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum
           UW551]
 gi|206591352|emb|CAQ56964.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
 gi|206595561|emb|CAQ62488.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
          Length = 284

 Score = 34.8 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           +S I   VV +  I+ G+ L+   +K +   ++++          + G V R  L+    
Sbjct: 33  SSGITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEP 92

Query: 82  IPLSVLHRP 90
           +  S L   
Sbjct: 93  VLESKLTPQ 101


>gi|330811038|ref|YP_004355500.1| hypothetical protein PSEBR_a4092 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379146|gb|AEA70496.1| Hypothetical protein; putative exported protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 271

 Score = 34.8 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 28/65 (43%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +   VV +V I  G+++   ++  +++    I  +   S +  VG +    +L   ++  
Sbjct: 39  LRSVVVATVEIPFGQMVEAQQVTTVRMPMDTIPDDAFDSSEQAVGKIATFDILRGDIVRG 98

Query: 85  SVLHR 89
           + L  
Sbjct: 99  ARLSE 103


>gi|195391642|ref|XP_002054469.1| GJ24471 [Drosophila virilis]
 gi|194152555|gb|EDW67989.1| GJ24471 [Drosophila virilis]
          Length = 377

 Score = 34.8 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIP 83
           +G ++V +  +   + +  + L       S I    Y     D++G+  +  +  D  I 
Sbjct: 316 LGKSIVAARNLEVRQQIQATDLAIKVSEPSGIPAEKYF----DIIGMRLKDSVYEDEPIT 371

Query: 84  LSVL 87
            ++L
Sbjct: 372 ENML 375


>gi|16588792|gb|AAL26896.1|AF317621_1 cadherin-related midgut membrane protein [Lymantria dispar]
          Length = 1723

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 13/94 (13%)

Query: 61  AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV-ISRGAKVRII---LTQGNMTISTAGIA 116
           A      VG +  R + P   I        Y+ +       II     +   TI+   + 
Sbjct: 697 ATDRGTAVGRIIVRQIRPGVTIDYEEFEMLYLTVRVRDLNTIIGEDYDESTFTITI--VD 754

Query: 117 LSD-------ASIGDVIAVKNIDTGVMVSGSVVD 143
           ++D        ++     V+ + +  +V GSV+ 
Sbjct: 755 MNDNPPVWVEGTLEQEFRVREMSSSGVVIGSVLA 788


>gi|33867071|ref|NP_898629.1| hypothetical protein PBD2.014 [Rhodococcus erythropolis]
 gi|33668905|gb|AAP73899.1| conserved hypothetical protein [Rhodococcus erythropolis]
          Length = 235

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           + + +V S  I  G+ +    L   QV   + I          VVG V    +    V+ 
Sbjct: 71  VTNVLVVSQDIAQGQQITSQDLTTKQVNAHAGIASVAIEDKATVVGQVAAVPIPSGTVLN 130

Query: 84  LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
            + +    + ++G  +        +T+S A +       GD++ +
Sbjct: 131 PNAVTSAVIPTKGLTLV------GVTVSYAKLPAEPLRAGDMVRI 169


>gi|218516081|ref|ZP_03512921.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
          etli 8C-3]
          Length = 58

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 27/44 (61%)

Query: 7  LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ 50
              ++  + + +   + +G+AVVP+ +I  G+ L+ S+L+E++
Sbjct: 15 AAMIAVAGIMVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVE 58


>gi|209886527|ref|YP_002290384.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5]
 gi|209874723|gb|ACI94519.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5]
          Length = 272

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 24/146 (16%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA------HSIKDVVGLVTRRVLLP 78
               +V    I  G+ +    +       +    ++        ++ D+ G + R   L 
Sbjct: 42  TTDVLVAKADIPLGQTIKAEDMTWQTWPAATASSSFIRKSERASAVADLTGSIARSPFLA 101

Query: 79  DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV----- 128
              I  + L +    S G+     +    M   +  I+    + G     D + V     
Sbjct: 102 GEPIRETKLVK----SNGSGFMAAILPSGMRAVSTEISPETGAGGFILPNDRVDVMLSRR 157

Query: 129 -KNIDT--GVMVSGSVVDTGTVRVVV 151
            +N D+  G MVS  ++ +  VRV+ 
Sbjct: 158 QRNPDSNGGEMVSSEIILSD-VRVLA 182


>gi|295087246|emb|CBK68769.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
          Length = 286

 Score = 34.8 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 205 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 264

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 265 QTIRVENSD---VVAAKVINELKIK 286


>gi|62389769|ref|YP_225171.1| hypothetical protein cg1002 [Corynebacterium glutamicum ATCC 13032]
 gi|21323646|dbj|BAB98273.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
 gi|41325104|emb|CAF19585.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032]
          Length = 217

 Score = 34.8 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 22/58 (37%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
            AVV    I AG  +  S L    +  S +      SI DVVGLV    L    +   
Sbjct: 44  TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 101


>gi|297572143|ref|YP_003697917.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595]
 gi|296932490|gb|ADH93298.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595]
          Length = 203

 Score = 34.8 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 10/117 (8%)

Query: 6   FLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           F    +++  SL S     A     AVV +  + AG  L++S L  + +  + + G+   
Sbjct: 9   FAALVAVFAQSLVSALDSSAPARYRAVVAATDLPAGHQLSDSDLSVLPLP-TQLPGSTV- 66

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK-----VRIILTQGNMTISTAG 114
           ++ DV G      +    +I    +  P  + + +        ++   G +++   G
Sbjct: 67  NVTDVSGHHLLVSVPKGALISTHHVLSPQTLEQASPGYVIAPVLLADTGGLSLIHTG 123


>gi|118581114|ref|YP_902364.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118503824|gb|ABL00307.1| SAF domain protein [Pelobacter propionicus DSM 2379]
          Length = 291

 Score = 34.8 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
           VV S  I  G  LN + LK M    ++I        K ++  ++ R + P   +  +
Sbjct: 45  VVASADIPVGSKLNTTHLKMMAWPATSIPPGSFTDTKALIDRISIRPIGPGEPLTEA 101


>gi|315654208|ref|ZP_07907116.1| SAF domain protein [Mobiluncus curtisii ATCC 51333]
 gi|315491243|gb|EFU80860.1| SAF domain protein [Mobiluncus curtisii ATCC 51333]
          Length = 198

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 12  LYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
           L V  + +LF         VV    + AG  +    +K   +  S +  N+      V+G
Sbjct: 20  LAVFVVVTLFLPEKAAATVVVVKHEVCAGCEITAQNVKLSALAPSAVPQNHFQKADRVIG 79

Query: 70  LVTRRVLLPDHVIPLSVLHRPYV 92
                 L    V+  ++L    V
Sbjct: 80  KTAAVSLTSGTVLQPALLVENAV 102


>gi|293572500|ref|ZP_06683479.1| N-acetylneuraminate synthase [Enterococcus faecium E980]
 gi|294620995|ref|ZP_06700194.1| N-acetylneuraminate synthase [Enterococcus faecium U0317]
 gi|291599453|gb|EFF30471.1| N-acetylneuraminate synthase [Enterococcus faecium U0317]
 gi|291607417|gb|EFF36760.1| N-acetylneuraminate synthase [Enterococcus faecium E980]
          Length = 334

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V   ++V +  +N G++L E  L   +  N              +G   +R +  D V+
Sbjct: 273 EVSRKSLVVTENLNVGDILTEKSLTIKRPGNGIAPKFLY----QYIGKKVKRPISADSVL 328

Query: 83  PLSVLH 88
               + 
Sbjct: 329 LEEDVE 334


>gi|120602160|ref|YP_966560.1| SAF domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120562389|gb|ABM28133.1| SAF domain [Desulfovibrio vulgaris DP4]
          Length = 272

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV +V +  G  +   +LK     +++         K +VG V    +    VI  + L 
Sbjct: 45  VVSAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104

Query: 89  RPYVISRGAKVRI 101
                S G    I
Sbjct: 105 PADATSGGVSTMI 117


>gi|84498693|ref|ZP_00997446.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649]
 gi|84381030|gb|EAP96917.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649]
          Length = 191

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 26/112 (23%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG---NYAHSIKDVVGLVTRRVLLP 78
                 A+V +  + +G VL    L+  Q+   +           ++D+VG +    +  
Sbjct: 15  PPPTTSALVAARDLPSGAVLTADDLRTTQIRGESDSPGTVGAVGRVRDLVGRLLTSPVAA 74

Query: 79  DHVIPLS-----------------------VLHRPYVISRGAKVRIILTQGN 107
             ++  S                             ++S G +V +    G 
Sbjct: 75  GELVTTSRLVPRTAAEGLPGDTVAAHVLHADERSLDLVSAGQRVTLFADTGG 126


>gi|69248924|ref|ZP_00604816.1| N-acetylneuraminate synthase [Enterococcus faecium DO]
 gi|257880181|ref|ZP_05659834.1| N-acetylneuraminate synthase [Enterococcus faecium 1,230,933]
 gi|257882983|ref|ZP_05662636.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,502]
 gi|257891434|ref|ZP_05671087.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,410]
 gi|68194334|gb|EAN08846.1| N-acetylneuraminate synthase [Enterococcus faecium DO]
 gi|257814409|gb|EEV43167.1| N-acetylneuraminate synthase [Enterococcus faecium 1,230,933]
 gi|257818641|gb|EEV45969.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,502]
 gi|257827794|gb|EEV54420.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,410]
          Length = 335

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V   ++V +  +N G++L E  L   +  N              +G   +R +  D V+
Sbjct: 274 EVSRKSLVVTENLNVGDILTEKSLTIKRPGNGIAPKFLY----QYIGKKVKRPISADSVL 329

Query: 83  PLSVLH 88
               + 
Sbjct: 330 LEEDVE 335


>gi|299482785|gb|ADJ19196.1| Lea4 [Escherichia coli]
          Length = 333

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           ++  ++V S  I AG ++    L+  +  +      +     +VVG V ++      +I
Sbjct: 279 IVRKSIVASKPIVAGTIITSDMLEIKRPGSGISPSRW----DEVVGSVAKKDYQIGELI 333


>gi|157952344|ref|YP_001497236.1| hypothetical protein NY2A_B040L [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155122571|gb|ABT14439.1| hypothetical protein NY2A_B040L [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 1471

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRV---LLPDHVI 82
           VV + +I  G +L   +L   +  N +I GN   +       +     R    +L   V 
Sbjct: 421 VVANYLIGNGMLLESVQLTVPRSANIDIVGNVIANANVDTQNITTTVMRTGNVILSGQVS 480

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +  +   Y +  G+ +  I   G   I+  G   +  +    +   N+ TGV+V+G+ +
Sbjct: 481 VVGNVSAAYFVGNGSTITGIPATGTQPINIIGNVFAPGN----VNAANVSTGVIVAGNAI 536

Query: 143 DTGTVRVV 150
             G +  V
Sbjct: 537 AVGQINTV 544


>gi|307293449|ref|ZP_07573295.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
 gi|306881515|gb|EFN12731.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
          Length = 338

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
           H +V +  +  G +L+    +        +   Y        + +VG V R  +     +
Sbjct: 48  HVLVATKALPVGTILDAESFRFQPWPKELVEQAYYLKGQSDPQKLVGSVIRTAISAGQPM 107

Query: 83  PLSVLHRP 90
            L  + +P
Sbjct: 108 TLGSVIKP 115


>gi|294146465|ref|YP_003559131.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
 gi|292676882|dbj|BAI98399.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
          Length = 302

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 18  DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
             +  +     V  +  I  GE +  + ++      +  R  YA +  +VVG V  R + 
Sbjct: 42  APVRVAAPVLLVRAARAIRTGETITAAMIRNAPGDPT--RYPYAATSAEVVGKVATRDIG 99

Query: 78  PDHVIPLSVLH 88
              +I    + 
Sbjct: 100 LHALIARDAVG 110


>gi|39936739|ref|NP_949015.1| hypothetical protein RPA3677 [Rhodopseudomonas palustris CGA009]
 gi|192292565|ref|YP_001993170.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
 gi|39650595|emb|CAE29118.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
 gi|192286314|gb|ACF02695.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
          Length = 193

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 10/115 (8%)

Query: 15  LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVV 68
               +   +     +V    I  G+ +    L+      +    N+           D+ 
Sbjct: 36  PGAPAAPVAQTVEVLVAKNDIPLGQAVTPGDLQWQTWPAATASSNFIRRDLHPGATTDIG 95

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
           G +TR   +    I    L +      G+          M   +   AL   + G
Sbjct: 96  GSITRAPFIAGEPIRRQKLVQAD----GSSSVPAFVPTGMRAISTETALEPGATG 146


>gi|253701799|ref|YP_003022988.1| Flp pilus assembly protein CpaB [Geobacter sp. M21]
 gi|251776649|gb|ACT19230.1| Flp pilus assembly protein CpaB [Geobacter sp. M21]
          Length = 291

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
           L +S     + S  A      VV +  I  G  +  ++LK       +I    A  I+ V
Sbjct: 24  LAYSFLQQEVKSAKAIQPQRIVVAAADIPIGTAITPAQLKVTSWPKDSIPPGSARDIEAV 83

Query: 68  VGLVTRRVLLPDHVIPLSVLHR 89
              V  R +     +  + L  
Sbjct: 84  ANRVAIRPITGGDAVTEAKLKP 105


>gi|87199102|ref|YP_496359.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444]
 gi|87134783|gb|ABD25525.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444]
          Length = 342

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 4/68 (5%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
             +V    +  G ++    +         ++  Y       ++ ++G V R  +     +
Sbjct: 46  KVLVAQRALPVGTIITADSINFQAWPKDMVQDAYFVEGEADMQKLLGTVVRNPITAGEPV 105

Query: 83  PLSVLHRP 90
               L  P
Sbjct: 106 TKGNLVAP 113


>gi|300704929|ref|YP_003746532.1| pilus assembly (cpab), transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299072593|emb|CBJ43943.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
           solanacearum CFBP2957]
          Length = 284

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S I   VV +  I+ G+ L+   +K +   ++++          + G V R  L+    +
Sbjct: 34  SGITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEPV 93

Query: 83  PLSVLHRP 90
             S L   
Sbjct: 94  LESKLTPQ 101


>gi|269958186|ref|YP_003327974.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
 gi|269306867|gb|ACZ32416.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
          Length = 234

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 34  VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYV 92
            +  G+V+ +  L  ++++        A S    VVG      L+   V+    +    V
Sbjct: 76  TVVRGQVITKDDLMSVRISVDPALHPVATSQSATVVGKRAALDLVAGGVVTAEQVTDTPV 135

Query: 93  ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
            + G  V        + +++A +      +GD + + +  
Sbjct: 136 PADGQSVV------GLNLTSAMLPAQQIRVGDKVRIVSTS 169


>gi|253571572|ref|ZP_04848978.1| conjugate transposon [Bacteroides sp. 1_1_6]
 gi|251838780|gb|EES66865.1| conjugate transposon [Bacteroides sp. 1_1_6]
          Length = 302

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 281 QTIRVENSD---IVAAKVINELKIK 302


>gi|20807498|ref|NP_622669.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516027|gb|AAM24273.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
           MB4]
          Length = 268

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 10/89 (11%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           A   +  +  G+ L            S   G     +  + GL T   + P  V+ +   
Sbjct: 25  AFAATYTVKPGDTL---------WGISQKYGITYTKLMALNGLQTT-TIYPGQVLQVPGN 74

Query: 88  HRPYVISRGAKVRIILTQGNMTISTAGIA 116
              YV+ +G  + +I  +  +T+     A
Sbjct: 75  DNTYVVQKGDSLYLIAKKYGITVDALKAA 103


>gi|299132282|ref|ZP_07025477.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2]
 gi|298592419|gb|EFI52619.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2]
          Length = 273

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 6/67 (8%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA------HSIKDVVGLVTRRVLLP 78
               +V    I  G+ +    +K      +    ++        +IKD+ G + R   L 
Sbjct: 43  TTDVLVAKSDIPLGQTITADDMKWQSWPAATASSSFVKKSERADAIKDMTGSIVRSPFLA 102

Query: 79  DHVIPLS 85
              I  +
Sbjct: 103 GEPIRET 109


>gi|237722525|ref|ZP_04553006.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229448335|gb|EEO54126.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 302

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKVLVIELVEKNGGRH 280

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 281 QTIRVENSD---VVAAKVINELKIK 302


>gi|189465155|ref|ZP_03013940.1| hypothetical protein BACINT_01500 [Bacteroides intestinalis DSM
           17393]
 gi|189437429|gb|EDV06414.1| hypothetical protein BACINT_01500 [Bacteroides intestinalis DSM
           17393]
          Length = 345

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 5   RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
           R+L    LY+ S  +     +  ++  +  ++ G+++ E  +       S   G      
Sbjct: 266 RWLGKEELYIDSSVTSAKVKLERSIATNKTLHPGDIITEDDIHL----LSPGDGFKWAER 321

Query: 65  KDVVGLVTRRVLLPDHVIPLSVL 87
           + VVG    + +  + +I  S +
Sbjct: 322 EKVVGHKVLKEIPRNEIIYPSSI 344


>gi|157953228|ref|YP_001498119.1| hypothetical protein AR158_C037L [Paramecium bursaria Chlorella
           virus AR158]
 gi|156067876|gb|ABU43583.1| hypothetical protein AR158_C037L [Paramecium bursaria Chlorella
           virus AR158]
          Length = 1467

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRV---LLPDHVI 82
           VV + +I  G +L   +L   +  N +I GN   +       +     R    +L   V 
Sbjct: 421 VVANYLIGNGMLLESVQLTVPRSANIDIVGNVIANANVDTQNITTTVMRTGNVILSGQVS 480

Query: 83  PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
            +  +   Y +  G+ +  I   G   I+  G   +  +    +   N+ TGV+V+G+ +
Sbjct: 481 VVGNVSAAYFVGNGSTITGIPATGTQPINIIGNVFAPGN----VNAANVSTGVIVAGNAI 536

Query: 143 DTGTVRVV 150
             G +  V
Sbjct: 537 AVGQINTV 544


>gi|19552105|ref|NP_600107.1| hypothetical protein NCgl0844 [Corynebacterium glutamicum ATCC
          13032]
          Length = 184

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 22/58 (37%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           AVV    I AG  +  S L    +  S +      SI DVVGLV    L    +   
Sbjct: 11 TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 68


>gi|56477529|ref|YP_159118.1| pilus assembly transmembrane protein [Aromatoleum aromaticum
          EbN1]
 gi|56313572|emb|CAI08217.1| pilus assembly transmembrane protein [Aromatoleum aromaticum
          EbN1]
          Length = 283

 Score = 34.8 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 23/64 (35%)

Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
              V +V +  G  +    ++ ++  + +I     H +  + G V    + P   +  S
Sbjct: 36 NRIAVAAVELQLGSRIAPEAIRLVEWPSGSIPAGAFHDLAKLDGRVAITGIQPGEPVLES 95

Query: 86 VLHR 89
           L  
Sbjct: 96 RLAP 99


>gi|71900822|ref|ZP_00682940.1| Allantoinase [Xylella fastidiosa Ann-1]
 gi|71729392|gb|EAO31505.1| Allantoinase [Xylella fastidiosa Ann-1]
          Length = 449

 Score = 34.8 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 43  ESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
           +S L+      + I    +   KD+V     R LLP  +        P +  +G  V   
Sbjct: 19  DSDLRIENGRIARIDTGLSAQSKDIVIDAAGRRLLPGMIDDQVHFREPGLTHKGDIVSES 78

Query: 103 LT--QGNMT 109
                G +T
Sbjct: 79  AAAVAGGLT 87


>gi|284172757|ref|YP_003406139.1| fumarylacetoacetate (FAA) hydrolase [Haloterrigena turkmenica DSM
           5511]
 gi|284017517|gb|ADB63466.1| fumarylacetoacetate (FAA) hydrolase [Haloterrigena turkmenica DSM
           5511]
          Length = 239

 Score = 34.4 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 63  SIKDVVGLVTRR-VLLPDHVIPLSVLHRPYVISRGAKVRIILTQ-GNMTISTAG 114
              +VV  +++R    P  V+       P +I  G  V I     G +  S  G
Sbjct: 183 DPYEVVSYLSKRFTFRPGDVVAFGSPANPGLIEPGDTVEITYENVGTLRNSVVG 236


>gi|270001379|gb|EEZ97826.1| hypothetical protein TcasGA2_TC000193 [Tribolium castaneum]
          Length = 350

 Score = 34.4 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +G ++V +  +  G++L    +K        I  +     KDV+G   + V+  D  I  
Sbjct: 290 LGKSLVAATTLRKGDILQHENIKIKVAEPKGIDASLL---KDVIGKHVKGVINEDESILQ 346

Query: 85  SVLH 88
             L 
Sbjct: 347 ENLE 350


>gi|323499922|ref|ZP_08104881.1| Flp pilus assembly protein CpaB [Vibrio sinaloensis DSM 21326]
 gi|323315163|gb|EGA68215.1| Flp pilus assembly protein CpaB [Vibrio sinaloensis DSM 21326]
          Length = 247

 Score = 34.4 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             ++ S  I AG  + E  +    +             ++++G V    +    V+  + 
Sbjct: 45  PVIIASQEIPAGTPIEEQHVSSRLLEVDWRNEGQFTKAEELIGQVVATTIYQGEVVHQNR 104

Query: 87  LHRP 90
           L  P
Sbjct: 105 LAAP 108


>gi|29345496|ref|NP_808999.1| conjugate transposon protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337388|gb|AAO75193.1| conserved protein found in conjugate transposon [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 302

 Score = 34.4 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 70  LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123
            V +R  + + VI     +   ++  G + VR + T    TI       I L   +    
Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280

Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
             I V+N D   +V+  V++   ++
Sbjct: 281 QTIRVENSD---VVAAKVINELKIK 302


>gi|78485799|ref|YP_391724.1| N-acylneuraminate-9-phosphate synthase [Thiomicrospira crunogena
           XCL-2]
 gi|78364085|gb|ABB42050.1| N-acetylneuraminate synthase [Thiomicrospira crunogena XCL-2]
          Length = 334

 Score = 34.4 bits (78), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           V + +S+  +V    +V +  I    V +E  +   +       G +A     V+G  + 
Sbjct: 267 VSASESMNIAVARKRIVAACPIAKNTVFSEENITLKRSD----SGVFATEWDQVIGQKST 322

Query: 74  RVLLPDHVI 82
           R    D  I
Sbjct: 323 RDYQEDEGI 331


>gi|330938338|gb|EGH41970.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 319

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           ++       +  ++  + VV +  I A   +    L   ++  +  R     +I  +VG 
Sbjct: 49  AIQTPPTPPVEDALRHNVVVLAKDIPANTAITADDLTIERLKVAPPRS--FEAIDKIVGR 106

Query: 71  VTRRVLLPDHVIPLSVLHR 89
            + R L     +  S    
Sbjct: 107 SSWRTLTAGSWLTESNFEA 125


>gi|325525577|gb|EGD03367.1| Flp pilus assembly protein CpaB [Burkholderia sp. TJI49]
          Length = 277

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +    V +  +N GE L  +++  +     ++        K++ G V R  L     +
Sbjct: 34  SSVTPIAVAATDLNLGEPLGPNQVHTVSWPTGSVPPGAFTDPKELDGRVVRTSLARGEPV 93

Query: 83  PLSVLHR 89
             S L  
Sbjct: 94  IESKLAP 100


>gi|219848639|ref|YP_002463072.1| SAF domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542898|gb|ACL24636.1| SAF domain protein [Chloroflexus aggregans DSM 9485]
          Length = 265

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66
           L  +     +  L A      V+ +  +  G  L+   L  + +     I+     S   
Sbjct: 28  LIVTAVFTVIAFLEAGQSEPVVILARDVPYGHQLSADDLTVVLLPRHRPIQLTGIASPAQ 87

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRP 90
           V+G    R L  + ++  S++   
Sbjct: 88  VIGQYAARNLSANDLLQPSMVTAQ 111


>gi|323700358|ref|ZP_08112270.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. ND132]
 gi|323460290|gb|EGB16155.1| Flp pilus assembly protein CpaB [Desulfovibrio desulfuricans ND132]
          Length = 273

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 2/100 (2%)

Query: 31  PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
               +  G  L E  L+  + T  +        +K V G V  + +     +    L   
Sbjct: 50  AKTDLGRGVKLTEDMLEIRKFTQDSRPSGAFAEVKQVEGRVLNQTVGMGDALTPLKLADK 109

Query: 91  YVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
            ++  G    I   +  M +    +         GD + V
Sbjct: 110 SIMGGGVSALITPGKRAMAVKGNEVMGLSGFVRPGDRVDV 149


>gi|322434103|ref|YP_004216315.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9]
 gi|321161830|gb|ADW67535.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9]
          Length = 291

 Score = 34.4 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
          H V  S  + +GE L    ++ +    SN         +D+VG      +  D  + 
Sbjct: 40 HYVAASRPLQSGEQLKPDSMELVNWPASNPIAGGFLKPEDLVGRSVLYPVEKDQPLT 96


>gi|258651609|ref|YP_003200765.1| SAF domain-containing protein [Nakamurella multipartita DSM 44233]
 gi|258554834|gb|ACV77776.1| SAF domain protein [Nakamurella multipartita DSM 44233]
          Length = 214

 Score = 34.4 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 6   FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI- 64
            L+  ++ + +      S        S  ++AG V+    L  ++V   +  G Y     
Sbjct: 27  LLVIAAIVLGARVMAAGSQTTPVWAASRSLSAGTVIGAGDLTAVEVNLGDQAGAYLTPAG 86

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHR 89
              VG      L    ++  S +  
Sbjct: 87  DSPVGRTLVAPLGAGELLAGSAVEP 111


>gi|300692330|ref|YP_003753325.1| pilus assembly (cpaB), transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299079390|emb|CBJ52061.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 284

 Score = 34.4 bits (78), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
           AS I    V S  +  G+ L+   +K +    +++          + G V +  L     
Sbjct: 33  ASGITKVAVASADVELGQRLSPEMVKLVDWPAASLPPGVVTDAHALDGRVVKASLTRGEP 92

Query: 82  IPLSVLHR 89
           +  S L  
Sbjct: 93  VLESKLTP 100


>gi|193213897|ref|YP_001995096.1| carboxyl transferase [Chloroherpeton thalassium ATCC 35110]
 gi|193087374|gb|ACF12649.1| carboxyl transferase [Chloroherpeton thalassium ATCC 35110]
          Length = 513

 Score = 34.4 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
           +++  + +  V G  V  +V    GE++ E  L    V  +     +  +  +  G++  
Sbjct: 178 MMADKTSYMFVTGPKVAKTVT---GEMITEEDLGGASVHATKSGVTHFVAQDENEGILLI 234

Query: 74  RVLLPDHVIPLSVLHRPYVISRGAKV 99
           R LL    +P + L  P V+     +
Sbjct: 235 RKLL--SYLPQNNLEEPQVVECDDPI 258


>gi|307721766|ref|YP_003892906.1| SAF domain-containing protein [Sulfurimonas autotrophica DSM 16294]
 gi|306979859|gb|ADN09894.1| SAF domain protein [Sulfurimonas autotrophica DSM 16294]
          Length = 292

 Score = 34.4 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
             V +  +  G++L+   +K+ ++  S I         +++    R  +  D  I L  +
Sbjct: 44  VFVAAKNLKKGDLLDAGSIKKAKLPKSYISFTPLTD-SEIISHYARVNIYKDEPIRLEKI 102

Query: 88  HRPYVISR 95
                + +
Sbjct: 103 SALKPVEK 110


>gi|170769778|ref|ZP_02904231.1| NnaB [Escherichia albertii TW07627]
 gi|170121392|gb|EDS90323.1| NnaB [Escherichia albertii TW07627]
          Length = 346

 Score = 34.4 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V   ++V    I  GEV     +   +  N      +     +++G    R    D +I 
Sbjct: 282 VARKSIVAKRNIKKGEVFTIDNITIKRPGNGISPMYWY----ELLGKKAERDFDEDQLII 337

Query: 84  LSVLHRPYV 92
            S      V
Sbjct: 338 QSGFVAQEV 346


>gi|149186254|ref|ZP_01864568.1| pilus assembly protein CpaB [Erythrobacter sp. SD-21]
 gi|148830285|gb|EDL48722.1| pilus assembly protein CpaB [Erythrobacter sp. SD-21]
          Length = 361

 Score = 34.4 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
             +V    +  G ++    +         ++  Y       +  ++G V R  +     +
Sbjct: 47  KVLVAQRALPTGTIITADAIGYQLWPEELVQDAYFLDGEADVSKLIGTVVRHPVTAGEPV 106

Query: 83  PLSVLHRP 90
               L  P
Sbjct: 107 TQGSLVSP 114


>gi|317125617|ref|YP_004099729.1| SAF domain protein [Intrasporangium calvum DSM 43043]
 gi|315589705|gb|ADU49002.1| SAF domain protein [Intrasporangium calvum DSM 43043]
          Length = 238

 Score = 34.4 bits (78), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 7   LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
           L+  S  + +     A       V    + AG+ +  +  + + V  S+  G Y  +   
Sbjct: 42  LVLVSATLGARLVASADERTPYFVAVDDLVAGDRVTGATFRRVDVALSDGMGGYLRADFP 101

Query: 67  V-VGLVTRRVLLPDHVIPLSVLHRP 90
           V VG    R L    ++P S L  P
Sbjct: 102 VPVGKALTRDLRAGELVPSSALSDP 126


>gi|226943876|ref|YP_002798949.1| sigma54-dependent activator protein [Azotobacter vinelandii DJ]
 gi|226718803|gb|ACO77974.1| sigma54-dependent activator protein [Azotobacter vinelandii DJ]
          Length = 466

 Score = 34.4 bits (78), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 14/93 (15%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL---------PDHVIPLSVLH 88
           G V+ +   + + +     R        + +G    RV+              I L +L 
Sbjct: 31  GTVIVDRDARIVWINERYARRFGLADPAEALGQPVERVIPGSLLREVAHSGQPILLDMLD 90

Query: 89  RP--YVISRGAKVRIILTQGNMTISTAGIALSD 119
            P   ++     VR    +   +I   G AL D
Sbjct: 91  TPKDPLVVMRLPVR---DEDGRSIGAIGFALFD 120


>gi|254506783|ref|ZP_05118923.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16]
 gi|219550364|gb|EED27349.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16]
          Length = 233

 Score = 34.4 bits (78), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++ S  I AG  + E  +    +               ++G V    + P  V+  + 
Sbjct: 31 PVIIASQEIPAGTPIEEQHITTKLLEVEWRNEGQFTDQNAILGQVVATTIFPGEVLHQNR 90

Query: 87 LHRP 90
          L  P
Sbjct: 91 LTVP 94


>gi|189500073|ref|YP_001959543.1| Lytic transglycosylase catalytic [Chlorobium phaeobacteroides BS1]
 gi|189495514|gb|ACE04062.1| Lytic transglycosylase catalytic [Chlorobium phaeobacteroides BS1]
          Length = 596

 Score = 34.4 bits (78), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 19/98 (19%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTR----------------- 73
              I  G+ L    +     + S  +  Y      + +GL+ +                 
Sbjct: 473 KRTIYPGQKLKVYGVSSSTSSASTAKATYHKVRRGESLGLIAKKYGVSTSKLAAWNNLGS 532

Query: 74  -RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110
            R + P   + LS   + + + RG  + +I  +  +TI
Sbjct: 533 KRTIYPGQRLRLSPATKIHKVRRGESLGLIAKKYGVTI 570


>gi|30249539|ref|NP_841609.1| type III antifreeze protein [Nitrosomonas europaea ATCC 19718]
 gi|30138902|emb|CAD85481.1| Type III antifreeze protein:CBS domain:NeuB family [Nitrosomonas
           europaea ATCC 19718]
          Length = 749

 Score = 34.4 bits (78), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +  ++V +  ++ G+++  S +       S  +G   + I ++ G V +R          
Sbjct: 402 LAKSLVINCDLSQGQLIRRSMITVK----SPGQGLQPNRIDELAGKVAQRDFKAGDFFFE 457

Query: 85  SVLHRPYVISRGAKV 99
           + +  P  + +   V
Sbjct: 458 TDI-TPKSVKKQHYV 471


>gi|84387246|ref|ZP_00990267.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01]
 gi|84377893|gb|EAP94755.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01]
          Length = 249

 Score = 34.4 bits (78), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 22/64 (34%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV S  I AG ++ +  L    +    I  N      D++G V    +    V+    
Sbjct: 45  PVVVASQEIEAGTIIEDQFLTTRLMEVDWINENNYSDKADLIGKVVANTIYAGEVLHKLR 104

Query: 87  LHRP 90
              P
Sbjct: 105 FTVP 108


>gi|86147468|ref|ZP_01065780.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222]
 gi|85834761|gb|EAQ52907.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222]
          Length = 249

 Score = 34.4 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 22/64 (34%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV S  I AG V+ +  L    +    I  N      +++G V    +    V+    
Sbjct: 45  PVVVASQEIEAGTVIEDQYLTTKLMEVDWINENNYSDQNELIGKVVANTIYAGEVLHKLR 104

Query: 87  LHRP 90
              P
Sbjct: 105 FTVP 108


>gi|299821787|ref|ZP_07053675.1| N-acetylneuraminate synthase [Listeria grayi DSM 20601]
 gi|299817452|gb|EFI84688.1| N-acetylneuraminate synthase [Listeria grayi DSM 20601]
          Length = 342

 Score = 34.4 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 8/62 (12%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDH 80
                ++V    I  GE+     L   +       GN    +K  +++G  + R    D 
Sbjct: 274 EAARKSIVAKRSIRKGEIFTADNLTVKR------PGNGISPMKWYEILGKESTRDFAEDD 327

Query: 81  VI 82
           +I
Sbjct: 328 LI 329


>gi|207108996|ref|ZP_03243158.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 186

 Score = 34.4 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 19  SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
            +  SVIG   A   +  I   E +  +  ++ ++    +         D V    +  +
Sbjct: 87  PVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKNFI 144

Query: 77  LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
            P+ ++         ++ +   +  +  +G ++I 
Sbjct: 145 PPNTLLSADKTQALIIVRKNDIITGVYEEGQISIE 179


>gi|55469113|gb|AAV52288.1| putative N-acetyl neuramic acid synthetase NeuB [Aeromonas
           hydrophila]
          Length = 751

 Score = 34.4 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V+G +++ +  +  GE++  + +       S  +G   +    ++G+V RR +      
Sbjct: 401 EVLGKSLICTRDLKIGEIITSNAVDIR----SPGKGLPPYEKNKLIGMVARRDIAVGDFF 456

Query: 83  PLSVLHR 89
             S L+ 
Sbjct: 457 YPSDLNE 463


>gi|326383759|ref|ZP_08205444.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL
          B-59395]
 gi|326197523|gb|EGD54712.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL
          B-59395]
          Length = 182

 Score = 34.4 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 18/59 (30%)

Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
            +  +  +  G VL    L  + +  + +  +        VG      +    +I  +
Sbjct: 24 RVLTAAADLRPGTVLTADDLTSVPMPAATVPASALRDTGKAVGQRLTGPVTRGEIITET 82


>gi|31792181|ref|NP_854674.1| hypothetical protein Mb1017c [Mycobacterium bovis AF2122/97]
 gi|121636917|ref|YP_977140.1| hypothetical protein BCG_1045c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|215402806|ref|ZP_03414987.1| hypothetical protein Mtub0_03760 [Mycobacterium tuberculosis
           02_1987]
 gi|215410589|ref|ZP_03419397.1| hypothetical protein Mtub9_04524 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426268|ref|ZP_03424187.1| hypothetical protein MtubT9_07731 [Mycobacterium tuberculosis T92]
 gi|215445138|ref|ZP_03431890.1| hypothetical protein MtubT_04052 [Mycobacterium tuberculosis T85]
 gi|224989389|ref|YP_002644076.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|260185899|ref|ZP_05763373.1| hypothetical protein MtubCP_07697 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260200017|ref|ZP_05767508.1| hypothetical protein MtubT4_07787 [Mycobacterium tuberculosis T46]
 gi|289442410|ref|ZP_06432154.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46]
 gi|289446571|ref|ZP_06436315.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289744726|ref|ZP_06504104.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749518|ref|ZP_06508896.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92]
 gi|289757073|ref|ZP_06516451.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995178|ref|ZP_06800869.1| hypothetical protein Mtub2_11847 [Mycobacterium tuberculosis 210]
 gi|298524484|ref|ZP_07011893.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis
           94_M4241A]
 gi|31617769|emb|CAD93878.1| HYPOTHETICAL PROTEIN Mb1017c [Mycobacterium bovis AF2122/97]
 gi|121492564|emb|CAL71032.1| Hypothetical protein BCG_1045c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772502|dbj|BAH25308.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289415329|gb|EFD12569.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46]
 gi|289419529|gb|EFD16730.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289685254|gb|EFD52742.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690105|gb|EFD57534.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92]
 gi|289712637|gb|EFD76649.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494278|gb|EFI29572.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis
           94_M4241A]
 gi|326904784|gb|EGE51717.1| hypothetical protein TBPG_02700 [Mycobacterium tuberculosis W-148]
          Length = 218

 Score = 34.4 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 18/58 (31%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV +  +  G  L    ++  + + + +       +  VVG           V+ 
Sbjct: 54  AEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111


>gi|331683723|ref|ZP_08384319.1| N-acetylneuraminate synthase [Escherichia coli H299]
 gi|331078675|gb|EGI49877.1| N-acetylneuraminate synthase [Escherichia coli H299]
          Length = 345

 Score = 34.4 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V   ++V    I  GE+     +   +  N      +     +V+G    +  L D +I 
Sbjct: 281 VARKSIVAKRDIKKGEIFTTDNITTKRPGNGISPMYWY----EVLGKKAEQDFLEDQLIK 336

Query: 84  LSVLHRPYV 92
           +S      +
Sbjct: 337 VSGFEEQEI 345


>gi|78191376|gb|ABB29902.1| NnaB [Escherichia coli]
          Length = 345

 Score = 34.4 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
           V   ++V    I  GE+     +   +  N      +     +V+G    +  L D +I 
Sbjct: 281 VARKSIVAKRDIKKGEIFTTDNITTKRPGNGISPMYWY----EVLGKKAEQDFLEDQLIK 336

Query: 84  LSVLHRPYV 92
           +S      +
Sbjct: 337 VSGFEEQEI 345


>gi|239934071|ref|ZP_04691024.1| hypothetical protein SghaA1_38087 [Streptomyces ghanaensis ATCC
          14672]
          Length = 182

 Score = 34.4 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 38 GEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
          G+VL E  L E  V          A  +K VVG      L P  ++  S + +  ++  G
Sbjct: 22 GQVLTEQDLGEASVALDPAVKAVPADDLKSVVGKRAAVELKPGSLLSPSQVTKDSLVKPG 81

Query: 97 AK 98
           +
Sbjct: 82 EQ 83


>gi|309790167|ref|ZP_07684739.1| SAF domain protein [Oscillochloris trichoides DG6]
 gi|308227752|gb|EFO81408.1| SAF domain protein [Oscillochloris trichoides DG6]
          Length = 274

 Score = 34.4 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKD 66
           L  ++ +  L  L +      VV    +  G+ ++   L  + V                
Sbjct: 31  LLGAVTLAILGFLESRKSETVVVMVRDVPYGQQISAEDLGTVTVPLHRPAQLAGVSDPAT 90

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPY 91
           VVG    R L  + ++  S+L    
Sbjct: 91  VVGQYAARNLGSNDLLQPSMLMAAP 115


>gi|187927688|ref|YP_001898175.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
 gi|187724578|gb|ACD25743.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
          Length = 283

 Score = 34.4 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +   VV +  ++ G+ L   +L+ +     ++        K + G V R  L     I
Sbjct: 34  SSVKQVVVAASDMDLGQPLGNEQLRTVSWPAGSLPPGTFDDPKALQGRVVRASLQKGEPI 93

Query: 83  PLSVLHR 89
             + L  
Sbjct: 94  LENKLAP 100


>gi|77919344|ref|YP_357159.1| Flp pilus assembly protein CpaB [Pelobacter carbinolicus DSM 2380]
 gi|77545427|gb|ABA88989.1| Flp pilus assembly protein CpaB [Pelobacter carbinolicus DSM 2380]
          Length = 272

 Score = 34.4 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
            +   VV +  +N G  L+++ L   Q   +++       I+ VVG V+   ++    I 
Sbjct: 44  AMTEIVVAAADVNIGTRLDQTLLAMAQWPKASVPKGAFEDIEQVVGRVSVSKMVTGTPIL 103

Query: 84  LSVLHRP 90
            + L  P
Sbjct: 104 AAELAAP 110


>gi|312199830|ref|YP_004019891.1| SAF domain protein [Frankia sp. EuI1c]
 gi|311231166|gb|ADP84021.1| SAF domain protein [Frankia sp. EuI1c]
          Length = 287

 Score = 34.1 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 8   LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYA--HSI 64
           +  S+ + +     A      V     + AG V++   L  ++   S+   G Y     +
Sbjct: 54  VLVSVVLGARLFATADRTSAWVAAKADLPAGHVVSAGDLVTVRAQLSDATAGRYYPGRRL 113

Query: 65  KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
           K+VVG    R +    +I  S    P   +    V I++  G +     G
Sbjct: 114 KEVVGGTLARPVGAGDLISGSDFAGPDT-AATRLVPIVVQAGRLPDLAPG 162


>gi|108801257|ref|YP_641454.1| hypothetical protein Mmcs_4293 [Mycobacterium sp. MCS]
 gi|119870408|ref|YP_940360.1| SAF domain-containing protein [Mycobacterium sp. KMS]
 gi|108771676|gb|ABG10398.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696497|gb|ABL93570.1| SAF domain [Mycobacterium sp. KMS]
          Length = 218

 Score = 34.1 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 22/66 (33%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV +  +  G  L ES ++  +   + +    A     V+G           V+    
Sbjct: 53  DVVVAATDLTPGTELAESDVRVERRPLTTVPDGAAVDPTAVIGATVAGPTRRGEVLTDVR 112

Query: 87  LHRPYV 92
           L  P +
Sbjct: 113 LLGPRI 118


>gi|215429850|ref|ZP_03427769.1| hypothetical protein MtubE_04012 [Mycobacterium tuberculosis
           EAS054]
 gi|289753048|ref|ZP_06512426.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289693635|gb|EFD61064.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
          Length = 218

 Score = 34.1 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 18/58 (31%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV +  +  G  L    ++  + + + +       +  VVG           V+ 
Sbjct: 54  AEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111


>gi|289675700|ref|ZP_06496590.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae
           FF5]
          Length = 160

 Score = 34.1 bits (77), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           + VV +  I A   +    L   ++  + +      +I  +VG  + R L     +  S 
Sbjct: 65  NVVVLARDIPAYTAITADDLTIERLKVAPL--GSFEAIDKIVGRSSWRTLTAGSWLTESN 122

Query: 87  LHR 89
              
Sbjct: 123 FEA 125


>gi|28899194|ref|NP_798799.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153836767|ref|ZP_01989434.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810]
 gi|260361568|ref|ZP_05774595.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030]
 gi|260876725|ref|ZP_05889080.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034]
 gi|260898196|ref|ZP_05906692.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466]
 gi|260900396|ref|ZP_05908791.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037]
 gi|28807418|dbj|BAC60683.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149749913|gb|EDM60658.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810]
 gi|308089099|gb|EFO38794.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466]
 gi|308091466|gb|EFO41161.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034]
 gi|308109142|gb|EFO46682.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037]
 gi|308114026|gb|EFO51566.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030]
 gi|328474269|gb|EGF45074.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 10329]
          Length = 251

 Score = 34.1 bits (77), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 24/64 (37%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             VV ++ +  G +L+E  L    +    I        +  +G +    +    ++  + 
Sbjct: 45  PVVVATMELEPGTILDEKHLTTKLMEVDWIDDETLKVPEQALGRIVANTIYAGELVNPNR 104

Query: 87  LHRP 90
           L +P
Sbjct: 105 LAQP 108


>gi|308050060|ref|YP_003913626.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799]
 gi|307632250|gb|ADN76552.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799]
          Length = 288

 Score = 34.1 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 32  SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
           ++ + +G ++ E  L    V    +        + VVG+V +  L+    +         
Sbjct: 44  AISVPSGTIIQEKHLVLKSVPPGLVPDEVLSKPEQVVGMVAKFPLVEGDFLSR-----QK 98

Query: 92  VISRGA-KVRIILTQGNMTIST 112
           ++ +G   V   L   NM   T
Sbjct: 99  LVPKGEGSVLASLIAPNMRAVT 120


>gi|254255253|ref|ZP_04948569.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
 gi|124900990|gb|EAY71740.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
          Length = 323

 Score = 34.1 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           S +    V +  +N GE L  +++  +   + ++        K + G V R  L     +
Sbjct: 76  SAVTSVAVAATDLNLGEPLGANQIHMVSWPSGSVPTGAFTDTKALEGRVVRTSLARGEPV 135

Query: 83  PLSVLHR 89
             S L  
Sbjct: 136 IESKLAP 142


>gi|323698198|ref|ZP_08110110.1| N-acetylneuraminate synthase [Desulfovibrio sp. ND132]
 gi|323458130|gb|EGB13995.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans ND132]
          Length = 338

 Score = 34.1 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V    +V +  I AGE   E+ +   +   +   G       +V+GL  +R   P   I
Sbjct: 280 DVARRFLVATAPIKAGEPFTEANVAARR---TGCGGVSPMRWDEVMGLTAKRNFQPGEGI 336


>gi|256820499|ref|YP_003141778.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
 gi|256582082|gb|ACU93217.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
          Length = 359

 Score = 34.1 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 41  LNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
           +   +L++ ++   N + NY +S   V G    R    + ++    +    ++S G  + 
Sbjct: 135 VTAQQLEQARLQLKNAQANY-NSAAIVSGDTAVRS-KINGIVTSKEVEEGTLVSAGQTLF 192

Query: 101 IILTQGNMTISTAGIALSDA--SIGDVIAVKNIDTGVMVSGSVV 142
            ++   N+ +             +GDV+ +K   +  ++ G ++
Sbjct: 193 NVVNIDNLKLKITVDESQVGELKVGDVVKIKPSTSSELIDGKII 236


>gi|225851159|ref|YP_002731393.1| N-acetylneuraminate synthase [Persephonella marina EX-H1]
 gi|225644874|gb|ACO03060.1| N-acetylneuraminate synthase [Persephonella marina EX-H1]
          Length = 335

 Score = 34.1 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
            V   ++V    I  GE+  E  L   +         +     +++G    R    D VI
Sbjct: 276 PVARKSIVAKRDIKKGEIFTEENLTVKRPGTGISPMRW----NEIIGKKAPRDFKKDEVI 331


>gi|15608130|ref|NP_215505.1| hypothetical protein Rv0990c [Mycobacterium tuberculosis H37Rv]
 gi|15840415|ref|NP_335452.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551]
 gi|148660771|ref|YP_001282294.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra]
 gi|167968056|ref|ZP_02550333.1| hypothetical protein MtubH3_08483 [Mycobacterium tuberculosis
           H37Ra]
 gi|254231287|ref|ZP_04924614.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C]
 gi|254363908|ref|ZP_04979954.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|306775124|ref|ZP_07413461.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis
           SUMu001]
 gi|306781961|ref|ZP_07420298.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis
           SUMu002]
 gi|306783684|ref|ZP_07422006.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis
           SUMu003]
 gi|306788039|ref|ZP_07426361.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis
           SUMu004]
 gi|306792372|ref|ZP_07430674.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis
           SUMu005]
 gi|306796774|ref|ZP_07435076.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis
           SUMu006]
 gi|306802661|ref|ZP_07439329.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis
           SUMu008]
 gi|306806841|ref|ZP_07443509.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis
           SUMu007]
 gi|306967040|ref|ZP_07479701.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis
           SUMu009]
 gi|306971230|ref|ZP_07483891.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis
           SUMu010]
 gi|307078960|ref|ZP_07488130.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis
           SUMu011]
 gi|307083518|ref|ZP_07492631.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis
           SUMu012]
 gi|2052124|emb|CAB08150.1| HYPOTHETICAL PROTEIN Rv0990c [Mycobacterium tuberculosis H37Rv]
 gi|13880585|gb|AAK45266.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551]
 gi|124600346|gb|EAY59356.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C]
 gi|134149422|gb|EBA41467.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504923|gb|ABQ72732.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra]
 gi|308216331|gb|EFO75730.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis
           SUMu001]
 gi|308325350|gb|EFP14201.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331529|gb|EFP20380.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335333|gb|EFP24184.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis
           SUMu004]
 gi|308339140|gb|EFP27991.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis
           SUMu005]
 gi|308342811|gb|EFP31662.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346664|gb|EFP35515.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis
           SUMu007]
 gi|308350579|gb|EFP39430.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis
           SUMu008]
 gi|308355270|gb|EFP44121.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis
           SUMu009]
 gi|308359224|gb|EFP48075.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis
           SUMu010]
 gi|308363136|gb|EFP51987.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis
           SUMu011]
 gi|308366793|gb|EFP55644.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis
           SUMu012]
 gi|323720557|gb|EGB29638.1| hypothetical protein TMMG_02985 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 218

 Score = 34.1 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 18/58 (31%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV +  +  G  L    ++  + + + +       +  VVG           V+ 
Sbjct: 54  SEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111


>gi|229819398|ref|YP_002880924.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
 gi|229565311|gb|ACQ79162.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
          Length = 207

 Score = 34.1 bits (77), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             +V +  I A + +  + ++ + +    +  +   +  DVVG      L   + +   +
Sbjct: 37  DVLVAAHDIAAAQEIVPADVRVVALPADAVPPDALDAADDVVGRQLAHALPAGYPLGPGM 96

Query: 87  LHRPYVIS---RGAKV 99
           +  P +     RG  V
Sbjct: 97  VLGPGLADGAPRGTTV 112


>gi|54026930|ref|YP_121172.1| hypothetical protein nfa49560 [Nocardia farcinica IFM 10152]
 gi|54018438|dbj|BAD59808.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 221

 Score = 34.1 bits (77), Expect = 6.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 20/71 (28%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
            +     VV +  +  G VL  + L        ++          + G      + P  V
Sbjct: 52  GAARIPVVVAARELPPGTVLAAADLTVAPHEAGSLPAGAVRDPAVLTGATLTAAMHPGEV 111

Query: 82  IPLSVLHRPYV 92
                +  P +
Sbjct: 112 FTDLRVVGPRL 122


>gi|302185188|ref|ZP_07261861.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae
           642]
          Length = 319

 Score = 34.1 bits (77), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 2/79 (2%)

Query: 11  SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
           ++       +  ++  + VV +  I A   +    L   ++           +I  +VG 
Sbjct: 49  AIQTPPTPPVEDALRHNVVVLARDIPAYTAITADDLTIERLKV--APPGSFEAIDKIVGR 106

Query: 71  VTRRVLLPDHVIPLSVLHR 89
            + R L     +  S    
Sbjct: 107 SSWRTLTAGSWLTESNFEA 125


>gi|134291858|ref|YP_001115627.1| SAF domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134135047|gb|ABO59372.1| SAF domain protein [Burkholderia vietnamiensis G4]
          Length = 281

 Score = 34.1 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
           +    V +  +N GE L  +++  +     ++        K++ G V R  L     +  
Sbjct: 36  VTSVAVATTDLNLGEPLGPNQIHMVSWPAGSVPTGAFTDTKELEGRVVRTSLARGEPVIE 95

Query: 85  SVLHR 89
           S L  
Sbjct: 96  SKLAP 100


>gi|328908302|gb|EGG28061.1| SAF domain protein [Propionibacterium sp. P08]
          Length = 219

 Score = 34.1 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV +  I  G V+  S L+ +++    +    A ++  V G      +    ++  S +
Sbjct: 63  VVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAA-ALAQVEGRQASVRITEGTILTTSAV 121


>gi|294678479|ref|YP_003579094.1| sialic acid synthase [Rhodobacter capsulatus SB 1003]
 gi|294477299|gb|ADE86687.1| sialic acid synthase [Rhodobacter capsulatus SB 1003]
          Length = 342

 Score = 34.1 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 29  VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
           VV    + AG ++ E+ +   +   S     Y      VVG  T R L  +  +  S L 
Sbjct: 286 VVADRDLPAGHLITEADI-WARRPGSGEIAGY--DFDKVVGKRTTRALPRNTQLKWSDLA 342


>gi|257792166|ref|YP_003182772.1| N-acylneuraminate-9-phosphate synthase [Eggerthella lenta DSM 2243]
 gi|257476063|gb|ACV56383.1| N-acylneuraminate-9-phosphate synthase [Eggerthella lenta DSM 2243]
          Length = 345

 Score = 34.1 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRVLLPDHVIP 83
            ++     I+ GE   +  ++       +IR  Y  +      ++G +++R +     I 
Sbjct: 287 RSLYAVDSISKGEPFTKDNVR-------SIRPGYGIAPKHLDKLLGRISKRDIDFGSPIT 339

Query: 84  LSVLH 88
              L 
Sbjct: 340 EDDLD 344


>gi|284038638|ref|YP_003388568.1| hypothetical protein Slin_3774 [Spirosoma linguale DSM 74]
 gi|283817931|gb|ADB39769.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
          Length = 791

 Score = 34.1 bits (77), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
            FS+ + S D+ +       ++    +N  + + E  L E  V    +      SI+DV+
Sbjct: 519 AFSISIKSADNQYIPTFSIPILAGRNLNPSDTVREYLLNETAVKALQLA-----SIQDVI 573

Query: 69  GLVTRRVLLPDHVI 82
           G        P  ++
Sbjct: 574 GKTATINGRPGTIV 587


>gi|148822199|ref|YP_001286953.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11]
 gi|218752660|ref|ZP_03531456.1| hypothetical protein MtubG1_04075 [Mycobacterium tuberculosis GM
           1503]
 gi|253799982|ref|YP_003032983.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN
           1435]
 gi|254549974|ref|ZP_05140421.1| hypothetical protein Mtube_05853 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289555228|ref|ZP_06444438.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN
           605]
 gi|289761124|ref|ZP_06520502.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM
           1503]
 gi|297633515|ref|ZP_06951295.1| hypothetical protein MtubK4_05303 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730500|ref|ZP_06959618.1| hypothetical protein MtubKR_05383 [Mycobacterium tuberculosis KZN
           R506]
 gi|313657829|ref|ZP_07814709.1| hypothetical protein MtubKV_05383 [Mycobacterium tuberculosis KZN
           V2475]
 gi|148720726|gb|ABR05351.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11]
 gi|253321485|gb|ACT26088.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN
           1435]
 gi|289439860|gb|EFD22353.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN
           605]
 gi|289708630|gb|EFD72646.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM
           1503]
 gi|328459724|gb|AEB05147.1| hypothetical protein TBSG_03018 [Mycobacterium tuberculosis KZN
           4207]
          Length = 218

 Score = 34.1 bits (77), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 18/58 (31%)

Query: 26  GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
              VV +  +  G  L    ++  + + + +       +  VVG           V+ 
Sbjct: 54  SEVVVAAQDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111


>gi|294012240|ref|YP_003545700.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
 gi|292675570|dbj|BAI97088.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
          Length = 295

 Score = 34.1 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV----GLVTRRVLLPDH 80
          +   VV +V +  G  +   +++ +    +++          +     G V  R + P  
Sbjct: 27 MAKVVVATVSLPFGSAVTAEKIRVVDWPANSVPPGAFRDPIQLTSLGKGRVVLRQIEPGE 86

Query: 81 VIPLS 85
           I  S
Sbjct: 87 PILAS 91


>gi|297172345|gb|ADI23321.1| hypothetical protein [uncultured nuHF2 cluster bacterium
           HF0770_19K18]
          Length = 1262

 Score = 34.1 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 4/42 (9%)

Query: 85  SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
           +    P ++ R      + T   + I   G A ++  IG  I
Sbjct: 545 NGFEEPILVYRND----VSTGNPLRIKLKGKASNNGGIGAKI 582


>gi|241662166|ref|YP_002980526.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
 gi|309780761|ref|ZP_07675502.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
 gi|240864193|gb|ACS61854.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
 gi|308920443|gb|EFP66099.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
          Length = 283

 Score = 34.1 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 22  ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
            S I    V +  I+ G+ L+   +K +    S++     +    + G V R  L     
Sbjct: 33  GSGITKIAVAATDIDLGQRLSPEAIKLVDWPASSLPPGAINDPHALDGRVVRASLTRGEP 92

Query: 82  IPLSVLHR 89
           +  S L  
Sbjct: 93  VLDSKLTP 100


>gi|257790639|ref|YP_003181245.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
 gi|257474536|gb|ACV54856.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
          Length = 432

 Score = 34.1 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
           + VV +  + AGE + E+ L+   V  +    + A  + DV G  +        
Sbjct: 257 NVVVTNRDVAAGETITEADLETQAVPKAYCPTDAATKVSDVAGHTSLTTQTAGT 310


>gi|307294423|ref|ZP_07574267.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
 gi|306880574|gb|EFN11791.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
          Length = 307

 Score = 34.1 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV----GLVTRRVLLPDH 80
           +   VV +V +  G  +   +++ +    +++          +     G V  R + P  
Sbjct: 41  MAKVVVATVSLPFGSAVTAEKIRTVDWPANSVPPGAFRDPIQLTSLGKGRVVLRQIEPGE 100

Query: 81  VIPLS 85
            I  S
Sbjct: 101 PILAS 105


>gi|294012432|ref|YP_003545892.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
 gi|292675762|dbj|BAI97280.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S]
          Length = 338

 Score = 34.1 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
           H +V +  +  G +L+    +        +   Y        + +VG V R  +     +
Sbjct: 48  HVLVATKALPVGTILDAESFRFQPWPKDLVEQAYYIKGQADPQKLVGSVIRTAISAGQPM 107

Query: 83  PLSVLHRP 90
            L  + +P
Sbjct: 108 TLGSVIKP 115


>gi|76801923|ref|YP_326931.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Natronomonas
           pharaonis DSM 2160]
 gi|76557788|emb|CAI49372.1| probable 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 3; probable
           5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 3
           [Natronomonas pharaonis DSM 2160]
          Length = 236

 Score = 34.1 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 50  QVTNSNIRGNYAHSIKDVVGLVTRR-VLLPDHVIPLSVLHRPYVISRGAKVRIILTQ-GN 107
           ++   +   N     ++V+  ++ R  L PD VI       P ++ RG ++ I     G 
Sbjct: 169 ELRQEDNTENMFIKPREVISFLSERFTLKPDDVISFGSPANPGLLERGDEIEIYYEGIGT 228

Query: 108 MTISTAG 114
           +  +  G
Sbjct: 229 LRNTVGG 235


>gi|317489752|ref|ZP_07948251.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|316911098|gb|EFV32708.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA]
          Length = 215

 Score = 33.7 bits (76), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 20/61 (32%)

Query: 30  VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
           V    I AGE ++ S ++        +      S  DVVG      +L   V+       
Sbjct: 52  VAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSGDVVGKKASSTILAGEVLSERRFRD 111

Query: 90  P 90
            
Sbjct: 112 A 112


>gi|289424445|ref|ZP_06426228.1| SAF domain protein [Propionibacterium acnes SK187]
 gi|289155142|gb|EFD03824.1| SAF domain protein [Propionibacterium acnes SK187]
          Length = 205

 Score = 33.7 bits (76), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            +V +  I  G V+  S L  +++    +    A  +  V G      +    ++  S +
Sbjct: 38  VIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEGTILTSSAV 96

Query: 88  HRPYVISRGA 97
                +  G 
Sbjct: 97  LSGSAVGSGK 106


>gi|302390221|ref|YP_003826042.1| D-proline reductase (dithiol) [Thermosediminibacter oceani DSM
           16646]
 gi|302200849|gb|ADL08419.1| D-proline reductase (dithiol) [Thermosediminibacter oceani DSM
           16646]
          Length = 584

 Score = 33.7 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 30/132 (22%)

Query: 38  GEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLPDHVIPLSVL---- 87
           G +++ + L++  +             +       V+G    + +     I   ++    
Sbjct: 25  GTIISPADLEDPAIFPDLEDSGLLTIPENVLTIGQVLGKKLIKTIDALTPITPDMIEGGL 84

Query: 88  ---HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV----MVSGS 140
               +P V+     V+            +G A +    G+VI + +I+ G      +   
Sbjct: 85  DQGEKPEVVEEAEMVQ------------SGAAQTVTGAGNVIRI-HIEEGKGINLEIPAI 131

Query: 141 VVDTGTVRVVVK 152
           V   GT     K
Sbjct: 132 VTAAGTAEPAAK 143


>gi|160878992|ref|YP_001557960.1| hypothetical protein Cphy_0834 [Clostridium phytofermentans ISDg]
 gi|160427658|gb|ABX41221.1| hypothetical protein Cphy_0834 [Clostridium phytofermentans ISDg]
          Length = 300

 Score = 33.7 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
           +  +    IN GE+L++  LK++ +        Y   ++  +G +    +  D  I  ++
Sbjct: 46  YVYLAKDTINPGEILSDDNLKKVYLECDMPTEYYITEVQ--LGTMAIIPIEVDMPILRTM 103


>gi|326792632|ref|YP_004310453.1| N-acetylneuraminate synthase [Clostridium lentocellum DSM 5427]
 gi|326543396|gb|ADZ85255.1| N-acetylneuraminate synthase [Clostridium lentocellum DSM 5427]
          Length = 333

 Score = 33.7 bits (76), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI--KDVVGLVTRRVLLPDH 80
           +V   ++V +  IN GE L E  L   +       GN    +   +V+G    R    D 
Sbjct: 275 AVARKSIVAARPINLGERLTEENLNVKR------PGNGISPMKWDEVIGRKALRNYEKDE 328

Query: 81  VI 82
           +I
Sbjct: 329 LI 330


>gi|256059016|ref|ZP_05449227.1| hydrolase, UxaA family protein [Brucella neotomae 5K33]
 gi|261322961|ref|ZP_05962158.1| galactarate dehydratase [Brucella neotomae 5K33]
 gi|261298941|gb|EEY02438.1| galactarate dehydratase [Brucella neotomae 5K33]
          Length = 514

 Score = 33.7 bits (76), Expect = 8.3,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 71  VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126
           V R  +     I +  +    +I RG KV +        +       G+A  D   G+ +
Sbjct: 23  VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIVPGEHV 82

Query: 127 AVKNI 131
            ++N+
Sbjct: 83  HLQNL 87


>gi|89100212|ref|ZP_01173079.1| hypothetical protein B14911_20170 [Bacillus sp. NRRL B-14911]
 gi|89085062|gb|EAR64196.1| hypothetical protein B14911_20170 [Bacillus sp. NRRL B-14911]
          Length = 274

 Score = 33.7 bits (76), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 38/86 (44%)

Query: 9   FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
           FF L  +S  +     +    V +  I +  ++   ++K +++ N  +  ++  +++D++
Sbjct: 24  FFVLQKVSALNSELGGMTEVYVAASDIPSRTLIEREQVKTVEIPNRYVNNSHVTNVEDLI 83

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVIS 94
             V    +  + VI  +++     + 
Sbjct: 84  NKVLVVPVAAEDVITKTMIKPVSNVR 109


>gi|85714635|ref|ZP_01045622.1| N-acetylneuraminate synthase [Nitrobacter sp. Nb-311A]
 gi|85698520|gb|EAQ36390.1| N-acetylneuraminate synthase [Nitrobacter sp. Nb-311A]
          Length = 358

 Score = 33.7 bits (76), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +V   ++V +  I  G++L +  L E +                ++G    R  +PD +I
Sbjct: 301 AVARRSLVAARAIRKGDILTQDMLAEKRPGTGLPPIEALR----LIGRPAGRDYMPDDLI 356

Query: 83  PL 84
             
Sbjct: 357 EP 358


>gi|73542328|ref|YP_296848.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134]
 gi|72119741|gb|AAZ62004.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134]
          Length = 280

 Score = 33.7 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
            VV +  +N G+ LN S+L+ +    +++       +K + G V R  L     +  + L
Sbjct: 39  VVVAANDLNLGQPLNGSQLRLVNWPTASVPPGAFEDLKLLEGRVVRTSLQRGEPVLDAKL 98

Query: 88  HR 89
             
Sbjct: 99  AP 100


>gi|3057081|gb|AAC38341.1| nitrous oxide reductase [uncultured eubacterium S321195C]
          Length = 528

 Score = 33.7 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 12  LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVV-- 68
           + VL     FA      +V + ++N   V                +      S  +VV  
Sbjct: 381 MAVLHDGPTFAEPHDCIIVRADIVNPRSVWARDDAMWATTAAQAAKDGVKLESGSEVVRE 440

Query: 69  GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ--------GNMTISTAGIALSDA 120
           G   R  +     +  +     + + +G +V +I+T           +TI+  G+A+   
Sbjct: 441 GNKVRVYIWS---VAPTFSMEKFTVKQGDEVTLIVTNLDKVDDLTHGITIANYGVAMEVG 497


>gi|145295050|ref|YP_001137871.1| hypothetical protein cgR_0993 [Corynebacterium glutamicum R]
 gi|140844970|dbj|BAF53969.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 217

 Score = 33.7 bits (76), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 22/58 (37%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
            AVV    I AG  +  S L    +  S +      SI DVVGLV    L    +   
Sbjct: 44  TAVVIVQEIPAGTKVESSDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 101


>gi|313835437|gb|EFS73151.1| SAF domain protein [Propionibacterium acnes HL037PA2]
 gi|314928544|gb|EFS92375.1| SAF domain protein [Propionibacterium acnes HL044PA1]
 gi|314970476|gb|EFT14574.1| SAF domain protein [Propionibacterium acnes HL037PA3]
          Length = 191

 Score = 33.7 bits (76), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
           VV +  I  G V+  S L+ +++    +    A ++  V G      +    ++  S +
Sbjct: 35 VVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAA-ALAQVEGRQASVRITEGTILTTSAV 93


>gi|88855598|ref|ZP_01130261.1| putative membrane/secreted protein [marine actinobacterium
           PHSC20C1]
 gi|88814922|gb|EAR24781.1| putative membrane/secreted protein [marine actinobacterium
           PHSC20C1]
          Length = 215

 Score = 33.7 bits (76), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 28  AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK-DVVGLVTRRVLLPDHVIPLSV 86
                  +  G+ +  S L    V  ++    Y    +  V G +  R +    +IP S 
Sbjct: 50  VYAAGAPLTPGDRVLSSDLVIRSVKLNDASQYYIARGELPVEGFIATRPIGAGELIPASS 109

Query: 87  LHR 89
           L  
Sbjct: 110 LGS 112


>gi|125975123|ref|YP_001039033.1| N-acetylneuraminate synthase [Clostridium thermocellum ATCC 27405]
 gi|256003221|ref|ZP_05428213.1| N-acylneuraminate-9-phosphate synthase [Clostridium thermocellum
           DSM 2360]
 gi|281418456|ref|ZP_06249475.1| N-acetylneuraminate synthase [Clostridium thermocellum JW20]
 gi|125715348|gb|ABN53840.1| N-acetylneuraminate synthase [Clostridium thermocellum ATCC 27405]
 gi|255992912|gb|EEU03002.1| N-acylneuraminate-9-phosphate synthase [Clostridium thermocellum
           DSM 2360]
 gi|281407540|gb|EFB37799.1| N-acetylneuraminate synthase [Clostridium thermocellum JW20]
 gi|316939290|gb|ADU73324.1| N-acetylneuraminate synthase [Clostridium thermocellum DSM 1313]
          Length = 330

 Score = 33.7 bits (76), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           V   ++V    I  GE+  E  L   +  N      +     +V+G    R    D +I
Sbjct: 274 VARKSIVAKRYIQKGEIFTEENLTVKRPGNGISPMQWF----EVLGRRAVRDFQEDELI 328


>gi|301614600|ref|XP_002936778.1| PREDICTED: copper-transporting ATPase 2-like [Xenopus (Silurana)
           tropicalis]
          Length = 1483

 Score = 33.7 bits (76), Expect = 9.1,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 75  VLLPDHVIPLSVLHRPYVISRGAKVRII----LTQGNMTISTAGIALSDASIGDVIAVKN 130
               + +I         ++ RG  V+++           I    +A      G+ + V+ 
Sbjct: 840 TFGANQIILREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGTSMADESLITGEPMPVRK 899

Query: 131 IDTGVMVSGSVVDTGTVRVVV 151
               ++++GS+   GTV V  
Sbjct: 900 KPGSMVIAGSINAHGTVLVEA 920


>gi|313672686|ref|YP_004050797.1| n-acetylneuraminate synthase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939442|gb|ADR18634.1| N-acetylneuraminate synthase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 343

 Score = 33.7 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
            ++     I  GEV +E  ++ ++         Y    K+++G    R +     I   +
Sbjct: 285 RSLFAVEDIKKGEVFSEKNVRSIRPGYGLHPKYY----KEIIGKKANRDIPRGTPISWDI 340

Query: 87  LHR 89
           + +
Sbjct: 341 IEK 343


>gi|254785441|ref|YP_003072870.1| N-acylneuraminate-9-phosphate synthase [Teredinibacter turnerae
           T7901]
 gi|237685192|gb|ACR12456.1| N-acylneuraminate-9-phosphate synthase [Teredinibacter turnerae
           T7901]
          Length = 333

 Score = 33.7 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           +   ++V    INAG++ +   L   +        N+     +V+G   +R   PD +I
Sbjct: 277 IARKSIVARTAINAGDIFSIDNLAVKRPGTGISPMNW----DEVIGRQAKRDYSPDELI 331


>gi|261367847|ref|ZP_05980730.1| N-acetylneuraminate synthase [Subdoligranulum variabile DSM 15176]
 gi|282570653|gb|EFB76188.1| N-acetylneuraminate synthase [Subdoligranulum variabile DSM 15176]
          Length = 331

 Score = 33.7 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 23  SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDH 80
           +V   ++V +  I AGEV     L   +       G+    ++  DV+G    R    D 
Sbjct: 274 AVARKSIVAARPIKAGEVFTADNLTTKR------PGDGISPMRWYDVLGKTAPRDFDEDE 327

Query: 81  VI 82
            I
Sbjct: 328 KI 329


>gi|116208740|ref|XP_001230179.1| hypothetical protein CHGG_03663 [Chaetomium globosum CBS 148.51]
 gi|88184260|gb|EAQ91728.1| hypothetical protein CHGG_03663 [Chaetomium globosum CBS 148.51]
          Length = 983

 Score = 33.7 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 67  VVGLVTRRVLLPDHVIPLSVLHRPYVIS--RGAKVRIILTQGNMTISTAGIALSDASIGD 124
           +VGLV         +I       P VI   RGA++RI +  G+  ++   IA   A  G+
Sbjct: 659 LVGLVA--------IIDPPRPEIPEVIKTLRGARIRIFMVTGDFALTAQAIARELADYGE 710

Query: 125 VIAVKNIDTGVM-VSGSVVDTGTV 147
           V+  +      + +   +   G V
Sbjct: 711 VVFARTTPEQKLRIVRELQARGHV 734


>gi|27364257|ref|NP_759785.1| N-acetylneuraminate synthase [Vibrio vulnificus CMCP6]
 gi|320157650|ref|YP_004190029.1| legionaminic acid synthase [Vibrio vulnificus MO6-24/O]
 gi|27360375|gb|AAO09312.1| N-acetylneuraminate synthase [Vibrio vulnificus CMCP6]
 gi|319932962|gb|ADV87826.1| legionaminic acid synthase [Vibrio vulnificus MO6-24/O]
          Length = 333

 Score = 33.7 bits (76), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 24  VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
           ++  ++V    I AG ++    L+  +  N    G       +VVG + ++      +I
Sbjct: 279 IVRKSLVAGKPIMAGSIICADMLEIKRPGN----GISPTRWDEVVGSIAKKDYQIGELI 333


>gi|266625537|ref|ZP_06118472.1| putative Flp pilus assembly protein CpaB [Clostridium hathewayi DSM
           13479]
 gi|288862557|gb|EFC94855.1| putative Flp pilus assembly protein CpaB [Clostridium hathewayi DSM
           13479]
          Length = 231

 Score = 33.7 bits (76), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 35  INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
           I  G+ +    ++ ++V + N+      + ++V+G      ++P   I  S +       
Sbjct: 12  IKIGDKVTGDMVRSVEVGSLNLPSEVMKNKENVIGKYASADMVPGDYIINSKVADEPAAE 71

Query: 95  RGAKVRIILTQGNMTISTAGIALS-DASI--GDVIAV 128
                 +   +  +++S    A      +  GD+++V
Sbjct: 72  NAYLYNLSGEKQAISVSVKSFATGLSGKLKSGDIVSV 108


>gi|325288260|ref|YP_004264441.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM
           8271]
 gi|324963661|gb|ADY54440.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM
           8271]
          Length = 274

 Score = 33.7 bits (76), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 3   CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
           C+   L     V  L +   S     V     I AG+ + +  ++ ++V    +  N   
Sbjct: 14  CILLSLLICFGVTPLFNKSVSQKTEIVRVVKEIKAGDEITKDTVQTVEVGGFGLPDNVIR 73

Query: 63  SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
             + V+G   +  L     I  + L             +  T+  M+++    A  +   
Sbjct: 74  QSEMVIGKYAKSDLSIGDYILNTKLSDTPAAENAYLYNLDGTKQAMSVTIKSFA--NGLS 131

Query: 123 GDVIAVKNIDTGVMVS 138
           G       + +G +VS
Sbjct: 132 GK------LQSGDIVS 141


>gi|302864767|ref|YP_003833404.1| SAF domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|302567626|gb|ADL43828.1| SAF domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 222

 Score = 33.7 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 25  IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIP 83
            G  +  +  ++ G  L    L  ++V+         A  + +V+GL     L P  ++ 
Sbjct: 56  TGTYLAVARQVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAAVRLTPGTLLT 115

Query: 84  LSVLHRPYVISRGAK 98
            + L    ++  G +
Sbjct: 116 PAQLTEAPLLGPGQQ 130


>gi|187923644|ref|YP_001895286.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
 gi|187714838|gb|ACD16062.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
          Length = 316

 Score = 33.7 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 2/76 (2%)

Query: 14  VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
            L   +         VV +  + AG+ +    ++   +  +            + G V  
Sbjct: 31  ALVAVTPATQASFRVVVATHTLPAGKAITVDDVRVQSLPIN--PNGAFTDPAQLAGRVPN 88

Query: 74  RVLLPDHVIPLSVLHR 89
             +  +  +  S L  
Sbjct: 89  AEIGAESPVLESQLSS 104


>gi|256396011|ref|YP_003117575.1| SAF domain-containing protein [Catenulispora acidiphila DSM 44928]
 gi|256362237|gb|ACU75734.1| SAF domain protein [Catenulispora acidiphila DSM 44928]
          Length = 222

 Score = 33.7 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIP 83
             +V    +  G+V++   LK + +    +    +A   K VVG      L+PD V+ 
Sbjct: 64  PVLVVGAPVQVGQVISADDLKVVDIAPGTLAHVAFADEEKQVVGQPAAVPLVPDEVLT 121


>gi|163857692|ref|YP_001631990.1| putative Flp pilus assembly protein [Bordetella petrii DSM 12804]
 gi|163261420|emb|CAP43722.1| putative Flp pilus assembly protein [Bordetella petrii]
          Length = 320

 Score = 33.7 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 27  HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
             V+ +  I AG  L+   LK  Q       G      +D+ G V R  +     I    
Sbjct: 56  PVVLAAKDIQAGTRLDAGMLKVQQWPIPLAHG--YAKPEDLAGQVARLDIAGGEPITNQS 113

Query: 87  LHR 89
           L +
Sbjct: 114 LAQ 116


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.155    0.416 

Lambda     K      H
   0.267   0.0475    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,929,505,469
Number of Sequences: 14124377
Number of extensions: 131457231
Number of successful extensions: 354017
Number of sequences better than 10.0: 1810
Number of HSP's better than 10.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 654
Number of HSP's that attempted gapping in prelim test: 350933
Number of HSP's gapped (non-prelim): 2821
length of query: 152
length of database: 4,842,793,630
effective HSP length: 115
effective length of query: 37
effective length of database: 3,218,490,275
effective search space: 119084140175
effective search space used: 119084140175
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 76 (33.7 bits)