BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str. psy62] (152 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str. psy62] gi|254040054|gb|ACT56850.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str. psy62] Length = 152 Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY Sbjct: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA Sbjct: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK Sbjct: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 >gi|315121846|ref|YP_004062335.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495248|gb|ADR51847.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 149 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 103/149 (69%), Positives = 122/149 (81%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R YV L+++ A+ +G AVVPSVVINAGEVL+E +LKE+ VTNSN+RGNYA Sbjct: 1 MRLFQVCLFYVFCLNAVLANGLGRAVVPSVVINAGEVLSELKLKELDVTNSNLRGNYARY 60 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 IKDV GLVTRR LLPD +I LS LHRPYVISRG KVRIIL QGNMTIS AG+ALSDAS+G Sbjct: 61 IKDVKGLVTRRTLLPDRIILLSALHRPYVISRGDKVRIILNQGNMTISAAGVALSDASVG 120 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 D I+VKNIDTGV+VSGS +D GTVR+++K Sbjct: 121 DAISVKNIDTGVIVSGSALDAGTVRIIIK 149 >gi|222084866|ref|YP_002543395.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722314|gb|ACM25470.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 166 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 101/150 (67%), Gaps = 3/150 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 V F FS +D + +G AVVP+ VI G+++ +L+E+ VTN N+ G+YA Sbjct: 20 SVMFAPAFSAGATGVD---GTGMGTAVVPTEVIYPGDIIGSGQLEEVDVTNPNLSGDYAR 76 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +I+DV G V++R LLP I +S L +P+ ++RG+ R++++ G+MTI+ AG L D ++ Sbjct: 77 TIRDVTGRVSKRTLLPGRTISISALRQPFAVTRGSNARLVMSMGSMTITAAGTPLDDGAV 136 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 GD + +N+D+G++V+G+V++ GT+RVV K Sbjct: 137 GDSVRARNLDSGIIVNGTVLENGTIRVVSK 166 >gi|86356313|ref|YP_468205.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli CFN 42] gi|86280415|gb|ABC89478.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 160 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 90/128 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V GLV++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSGSQLQEVEVTNPNLAGDYAKSISQVEGLVSKRTLLPGRTISV 92 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L PY ++RG+ +R++ + G MTIS AG L D + G V+ +N+D+GV+VSG+V+ Sbjct: 93 SALREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQVVRARNMDSGVIVSGTVLAD 152 Query: 145 GTVRVVVK 152 GT+ V K Sbjct: 153 GTIHVRAK 160 >gi|116250483|ref|YP_766321.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. viciae 3841] gi|115255131|emb|CAK06205.1| putative flagellar protein FlgA precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 160 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 91/128 (71%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTISV 92 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L Y ++RG+ +R++L+ G MTIS AG L D +IG V+ +N+D+GV+VSG+V+ Sbjct: 93 SGLREAYTVTRGSSIRLVLSLGAMTISAAGTPLEDGTIGQVVRARNMDSGVIVSGTVLAD 152 Query: 145 GTVRVVVK 152 GTV V K Sbjct: 153 GTVHVRAK 160 >gi|222147572|ref|YP_002548529.1| flagellar protein FLGA precursor [Agrobacterium vitis S4] gi|221734560|gb|ACM35523.1| flagellar protein FLGA precursor [Agrobacterium vitis S4] Length = 159 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 91/126 (72%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +A+VP+ I GE ++ ++L +QVTN N+ G +A + DVVG+++ + LLP IPL+ Sbjct: 34 YAIVPTDTIYPGEAISSNKLDRVQVTNPNLAGGFASDMADVVGMLSTKTLLPGRTIPLAT 93 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L RPY + RG+++R+I GN+TIS +G + DA+IGDVI V+N+D+G +VSG+V+ GT Sbjct: 94 LKRPYAVIRGSQLRLIFNIGNLTISASGSPMDDANIGDVIRVRNLDSGQIVSGTVMGDGT 153 Query: 147 VRVVVK 152 V+V+ K Sbjct: 154 VQVMAK 159 >gi|218672800|ref|ZP_03522469.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli GR56] Length = 163 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 90/128 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I + Sbjct: 36 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 95 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ Sbjct: 96 SGLREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLAD 155 Query: 145 GTVRVVVK 152 GTV V K Sbjct: 156 GTVHVRAK 163 >gi|190890364|ref|YP_001976906.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|190695643|gb|ACE89728.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 160 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 90/128 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 92 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ Sbjct: 93 SGLREPYTVTRGSSIRLVFSLGPMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLAD 152 Query: 145 GTVRVVVK 152 GTV V K Sbjct: 153 GTVHVRAK 160 >gi|209547929|ref|YP_002279846.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533685|gb|ACI53620.1| flagella basal body P-ring formation protein FlgA [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 160 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 90/128 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A +I V GLV++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLSGDFAKTISQVEGLVSKRTLLPGRTISV 92 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ Sbjct: 93 SGLREPYTVTRGSSIRLVFSLGAMTISAAGSPLEDGATGQLIRARNMDSGVIVSGTVLAD 152 Query: 145 GTVRVVVK 152 GTV V K Sbjct: 153 GTVHVRAK 160 >gi|241203107|ref|YP_002974203.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856997|gb|ACS54664.1| flagella basal body P-ring formation protein FlgA [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 160 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 90/128 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTISV 92 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L Y ++RG+ +R++L+ G +TIS AG L D + G V+ +N+D+GV+VSG+V+ Sbjct: 93 SGLREAYTVTRGSSIRLVLSFGALTISAAGTPLEDGTTGQVVRARNMDSGVIVSGTVLAD 152 Query: 145 GTVRVVVK 152 GTV V K Sbjct: 153 GTVHVRAK 160 >gi|325291938|ref|YP_004277802.1| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium sp. H13-3] gi|325059791|gb|ADY63482.1| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium sp. H13-3] Length = 162 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 1/149 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 VR L + + ++ FA A+VP+ I GE + ++K ++VTN NI YA Sbjct: 15 VRMCLASAFSLGAMAPAFAQAP-TALVPTRTIYPGETITPEQVKPVEVTNPNISAGYASD 73 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+++++ LLP IP++ L P ++ RG V+++ GNMT+ +G +SD S+G Sbjct: 74 ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 +V+ V+NID+GVMVSG+V+ GT++V+ K Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162 >gi|2275162|gb|AAB81414.1| FlgA [Sinorhizobium meliloti] Length = 168 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 83/125 (66%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AV+P I GE L+ S L+ + VTN ++R Y HSI +V G+VT+R LLP VI S L Sbjct: 44 AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVHSIDEVDGMVTKRTLLPGRVILASAL 103 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + RG+ VR++ G +TI+ AG L DA++GD+I V+N+DTGV+VSG+V+ T+ Sbjct: 104 REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 163 Query: 148 RVVVK 152 VV K Sbjct: 164 HVVAK 168 >gi|159184363|ref|NP_353578.2| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium tumefaciens str. C58] gi|3913663|sp|Q44339|FLGA_AGRT5 RecName: Full=Flagellar protein flgA; Flags: Precursor gi|1086562|gb|AAB68969.1| orfA; No significant homologies in the database; Method: conceptual translation supplied by author [Agrobacterium tumefaciens] gi|2459715|gb|AAB71791.1| FlgA [Agrobacterium tumefaciens] gi|159139677|gb|AAK86363.2| flagellar protein FLGA precursor [Agrobacterium tumefaciens str. C58] Length = 162 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 85/125 (68%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A+VP I GE ++ ++K ++VTN NI YA I +V G+++++ LLP IP++ L Sbjct: 38 ALVPVRTIYPGEAISPEQVKSVEVTNPNISAGYASDISEVEGMISKQTLLPGRTIPIAAL 97 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ RG V+++ GNMT+ +G +SD S+G+V+ V+NID+GVMVSG+V+ GT+ Sbjct: 98 REPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLGEVVRVRNIDSGVMVSGTVMKDGTI 157 Query: 148 RVVVK 152 +V+ K Sbjct: 158 QVMAK 162 >gi|307311558|ref|ZP_07591199.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti BL225C] gi|307318913|ref|ZP_07598344.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti AK83] gi|306895327|gb|EFN26082.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti AK83] gi|306899575|gb|EFN30204.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti BL225C] Length = 157 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 82/125 (65%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AV+P I GE L+ S L+ + VTN ++R Y SI +V G+VT+R LLP VI S L Sbjct: 33 AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSIDEVDGMVTKRTLLPGRVILASAL 92 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + RG+ VR++ G +TI+ AG L DA++GD+I V+N+DTGV+VSG+V+ T+ Sbjct: 93 REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 152 Query: 148 RVVVK 152 VV K Sbjct: 153 HVVAK 157 >gi|15964416|ref|NP_384769.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium meliloti 1021] gi|17380481|sp|Q52947|FLGA_RHIME RecName: Full=Flagellar protein flgA; Flags: Precursor gi|15073593|emb|CAC45235.1| Flagellar precursor transmembrane protein [Sinorhizobium meliloti 1021] Length = 168 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 82/125 (65%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AV+P I GE L+ S L+ + VTN ++R Y SI +V G+VT+R LLP VI S L Sbjct: 44 AVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSIDEVDGMVTKRTLLPGRVILASAL 103 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + RG+ VR++ G +TI+ AG L DA++GD+I V+N+DTGV+VSG+V+ T+ Sbjct: 104 REQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTI 163 Query: 148 RVVVK 152 VV K Sbjct: 164 HVVAK 168 >gi|150395486|ref|YP_001325953.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium medicae WSM419] gi|150027001|gb|ABR59118.1| SAF domain protein [Sinorhizobium medicae WSM419] Length = 169 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 82/125 (65%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AV+P I GE L+ S L+ + VTN ++R Y S+ +V G+VT+R LLP VI S L Sbjct: 45 AVIPKQTIYPGETLDASMLEVVDVTNPDLRDGYVRSLDEVDGMVTKRTLLPGRVILASAL 104 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + RG+ VRI+ + G +TI+ AG L D +IG++I V+NIDTGV+VSG+V+ T+ Sbjct: 105 REQYAVERGSTVRIVFSNGGLTITAAGSPLQDGAIGELIRVRNIDTGVIVSGTVMADSTI 164 Query: 148 RVVVK 152 VV K Sbjct: 165 HVVAK 169 >gi|227820859|ref|YP_002824829.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium fredii NGR234] gi|227339858|gb|ACP24076.1| SAF domain protein [Sinorhizobium fredii NGR234] Length = 169 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 56/125 (44%), Positives = 81/125 (64%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AV+P +I GE + S L+ + VTN ++ Y S+++V G VT+R LLP VI S L Sbjct: 45 AVIPKQIIYPGETIEASMLEVVDVTNPDLADGYIGSLEEVEGKVTKRTLLPGRVILASAL 104 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + RG+ VR+I G +TI+ AG L DA++G++I +NID+GV+VSG+V+ GTV Sbjct: 105 RDRYAVERGSTVRLIFNNGGLTITAAGSPLEDAAVGELIRARNIDSGVIVSGTVMADGTV 164 Query: 148 RVVVK 152 VV K Sbjct: 165 HVVAK 169 >gi|163758016|ref|ZP_02165104.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea phototrophica DFL-43] gi|162284305|gb|EDQ34588.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea phototrophica DFL-43] Length = 160 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 77/127 (60%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G AVVP I GE L+ ++E+ VTN N+RG Y + V+G VT R LLP IP Sbjct: 34 GTAVVPERTIYPGEELSAELVREVTVTNPNLRGGYVTTTTGVLGKVTTRTLLPGRTIPAG 93 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 VL + + RG V ++ + +TI+ AG L + ++GD I V+NI++GV VSG+V+ G Sbjct: 94 VLRDAWAVERGTTVELVFSGKGLTITAAGTPLQNGAVGDFIRVRNIESGVTVSGTVMADG 153 Query: 146 TVRVVVK 152 T++V K Sbjct: 154 TIQVAPK 160 >gi|218507130|ref|ZP_03505008.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli Brasil 5] Length = 109 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 43/93 (46%), Positives = 66/93 (70%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I + Sbjct: 17 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 76 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 S L PY ++RG+ +R++ + G MTIS AG L Sbjct: 77 SGLREPYTVTRGSSIRLVFSLGPMTISAAGTPL 109 >gi|110632655|ref|YP_672863.1| flagellar protein FlgA [Mesorhizobium sp. BNC1] gi|110283639|gb|ABG61698.1| flagellar protein FlgA [Chelativorans sp. BNC1] Length = 157 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VVP+ VI GE ++ L+EM + RG + A + D+ G V RR LLP +IPLS Sbjct: 33 VVPTRVIYPGETVSAEALQEMMLRQPP-RGAASIARTPGDLEGKVARRTLLPGRLIPLSY 91 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + PY++ +G+ V + T G +TIS + L + GD I V+N+D+G + +G V+ GT Sbjct: 92 VREPYLVEQGSTVTAVFTDGPLTISVLAVPLQPGAAGDFIKVRNVDSGAVFTGIVMQDGT 151 Query: 147 VRV 149 V+V Sbjct: 152 VKV 154 >gi|306846277|ref|ZP_07478838.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO1] gi|306273272|gb|EFM55141.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO1] Length = 160 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAAAQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG V ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGVPVPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|254720609|ref|ZP_05182420.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|265985649|ref|ZP_06098384.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|306838571|ref|ZP_07471408.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF 2653] gi|264664241|gb|EEZ34502.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|306406357|gb|EFM62599.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF 2653] Length = 160 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAAAQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +I+RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLITRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|217976226|ref|YP_002360373.1| flagella basal body P-ring formation protein FlgA [Methylocella silvestris BL2] gi|217501602|gb|ACK49011.1| flagella basal body P-ring formation protein FlgA [Methylocella silvestris BL2] Length = 148 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 7/137 (5%) Query: 20 LFASVIGHAV------VPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVT 72 LF + HA VP++ I G+ + + L + S +RGN + ++G + Sbjct: 9 LFGRIPAHAAESHALPVPAITIYPGDPIKDEWLVDRDFGATSPLRGNVVTNRSAIIGKIA 68 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 RR LLP IP +V+ ++ G KVRI+ Q + I+T G AL D ++GDVI+++NI+ Sbjct: 69 RRTLLPGAPIPANVVAERKIVGNGTKVRIVFEQPGIEIATYGAALQDGALGDVISLRNIE 128 Query: 133 TGVMVSGSVVDTGTVRV 149 TG+ V+G V G+VRV Sbjct: 129 TGLTVTGVVQADGSVRV 145 >gi|182680547|ref|YP_001834693.1| flagellar basal body P-ring biosynthesis protein-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636430|gb|ACB97204.1| Flagellar basal body P-ring biosynthesis protein-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 166 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%) Query: 30 VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+ I G+ + E+ + +E ++ RGN +VG RR LLP IP++ L Sbjct: 42 VPTTTIYPGDTIKEAWIIEREFAANSTYARGNVLTERAALVGKAARRTLLPGVPIPINAL 101 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P + GAKVRI+ + +TI+ G AL S+GD ++V+N+D+G+ VSG V G++ Sbjct: 102 SEPKAVLNGAKVRIVFMESGLTITAFGSALQSGSVGDNVSVRNLDSGLTVSGIVQADGSI 161 Query: 148 RV 149 RV Sbjct: 162 RV 163 >gi|306841048|ref|ZP_07473772.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO2] gi|306288937|gb|EFM60237.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO2] Length = 160 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|239834441|ref|ZP_04682769.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum intermedium LMG 3301] gi|239822504|gb|EEQ94073.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum intermedium LMG 3301] Length = 163 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ G V R+ LLP I +S L Sbjct: 39 VVPSATVYPGQIVSDTALLEKQFFINAPAASQYVLSLDQAAGKVARKTLLPGKPILVSAL 98 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 99 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLADGRI 158 Query: 148 RV 149 +V Sbjct: 159 QV 160 >gi|153011523|ref|YP_001372737.1| flagellar basal body P-ring biosynthesis protein FlgA [Ochrobactrum anthropi ATCC 49188] gi|151563411|gb|ABS16908.1| FlgA, flagellar basal-body P-ring formation protein [Ochrobactrum anthropi ATCC 49188] Length = 160 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S G V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSPDQAAGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L ++GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAVGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|256014943|ref|YP_003104952.1| flagellar basal body P-ring biosynthesis protein [Brucella microti CCM 4915] gi|255997603|gb|ACU49290.1| flagellar basal body P-ring biosynthesis protein [Brucella microti CCM 4915] Length = 160 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|225628626|ref|ZP_03786660.1| flagella basal body P-ring formation protein FlgA [Brucella ceti str. Cudo] gi|237816666|ref|ZP_04595658.1| flagella basal body P-ring formation protein FlgA [Brucella abortus str. 2308 A] gi|225616472|gb|EEH13520.1| flagella basal body P-ring formation protein FlgA [Brucella ceti str. Cudo] gi|237787479|gb|EEP61695.1| flagella basal body P-ring formation protein FlgA [Brucella abortus str. 2308 A] gi|326410336|gb|ADZ67400.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis M28] gi|326553628|gb|ADZ88267.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis M5-90] Length = 165 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 41 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 100 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 101 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 160 Query: 148 RV 149 +V Sbjct: 161 QV 162 >gi|23499917|ref|NP_699357.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis 1330] gi|62317104|ref|YP_222957.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 1 str. 9-941] gi|83269096|ref|YP_418387.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis biovar Abortus 2308] gi|161620237|ref|YP_001594123.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella canis ATCC 23365] gi|189022369|ref|YP_001932110.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus S19] gi|225686013|ref|YP_002733985.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis ATCC 23457] gi|254691411|ref|ZP_05154665.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|254695291|ref|ZP_05157119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|254698166|ref|ZP_05159994.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|254702577|ref|ZP_05164405.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|254706291|ref|ZP_05168119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|254711415|ref|ZP_05173226.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|254712014|ref|ZP_05173825.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|254715083|ref|ZP_05176894.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|254731834|ref|ZP_05190412.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|256029955|ref|ZP_05443569.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|256059607|ref|ZP_05449805.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|256111942|ref|ZP_05452893.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|256256597|ref|ZP_05462133.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|256262864|ref|ZP_05465396.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9] gi|260544342|ref|ZP_05820163.1| flagellar protein FlgA [Brucella abortus NCTC 8038] gi|260568515|ref|ZP_05838984.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40] gi|260757025|ref|ZP_05869373.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|260759603|ref|ZP_05871951.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|260762611|ref|ZP_05874945.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|260882835|ref|ZP_05894449.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|261215660|ref|ZP_05929941.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|261216793|ref|ZP_05931074.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|261313735|ref|ZP_05952932.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|261319023|ref|ZP_05958220.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|261319660|ref|ZP_05958857.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|261323576|ref|ZP_05962773.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|261753157|ref|ZP_05996866.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|265986974|ref|ZP_06099531.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|265993389|ref|ZP_06105946.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|297249953|ref|ZP_06933654.1| flagella basal body P-ring formation protein FlgA [Brucella abortus bv. 5 str. B3196] gi|23463494|gb|AAN33362.1| flagellar basal-body P-ring formation protein FlgA, putative [Brucella suis 1330] gi|62197297|gb|AAX75596.1| FlgA, flagellar basal-body P-ring formation protein [Brucella abortus bv. 1 str. 9-941] gi|82939370|emb|CAJ12318.1| Flageller protein FlgA [Brucella melitensis biovar Abortus 2308] gi|161337048|gb|ABX63352.1| FlgA, flagellar basal-body P-ring formation protein [Brucella canis ATCC 23365] gi|189020943|gb|ACD73664.1| Flageller protein FlgA [Brucella abortus S19] gi|225642118|gb|ACO02031.1| flagella basal body P-ring formation protein FlgA [Brucella melitensis ATCC 23457] gi|260097613|gb|EEW81487.1| flagellar protein FlgA [Brucella abortus NCTC 8038] gi|260155180|gb|EEW90261.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40] gi|260669921|gb|EEX56861.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|260673034|gb|EEX59855.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|260677133|gb|EEX63954.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|260872363|gb|EEX79432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|260917267|gb|EEX84128.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|260921882|gb|EEX88450.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|261292350|gb|EEX95846.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|261298246|gb|EEY01743.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|261299556|gb|EEY03053.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|261302761|gb|EEY06258.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|261742910|gb|EEY30836.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|262764259|gb|EEZ10291.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|263092699|gb|EEZ16908.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9] gi|264659171|gb|EEZ29432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|297173822|gb|EFH33186.1| flagella basal body P-ring formation protein FlgA [Brucella abortus bv. 5 str. B3196] Length = 160 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|260564304|ref|ZP_05834789.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|265989512|ref|ZP_06102069.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] gi|260151947|gb|EEW87040.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|263000181|gb|EEZ12871.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] Length = 157 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 33 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 92 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 93 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 152 Query: 148 RV 149 +V Sbjct: 153 QV 154 >gi|256043074|ref|ZP_05446018.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] Length = 159 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 35 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 94 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 95 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 154 Query: 148 RV 149 +V Sbjct: 155 QV 156 >gi|163844347|ref|YP_001622002.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis ATCC 23445] gi|163675070|gb|ABY39180.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 160 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTVLLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|148558735|ref|YP_001257214.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ovis ATCC 25840] gi|148370020|gb|ABQ62892.1| putative flagellar basal-body P-ring formation protein FlgA [Brucella ovis ATCC 25840] Length = 160 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ L P I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLFPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|17989430|ref|NP_542063.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|17985307|gb|AAL54327.1| flagella basal body p ring formation protein flga [Brucella melitensis bv. 1 str. 16M] Length = 137 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 13 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 72 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 73 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 132 Query: 148 RV 149 +V Sbjct: 133 QV 134 >gi|256158117|ref|ZP_05456035.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] gi|256252929|ref|ZP_05458465.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|261220020|ref|ZP_05934301.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|265996634|ref|ZP_06109191.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] gi|260918604|gb|EEX85257.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|262550931|gb|EEZ07092.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] Length = 160 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V+P + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VMPLATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RV 149 +V Sbjct: 156 QV 157 >gi|323139655|ref|ZP_08074697.1| flagella basal body P-ring formation protein FlgA [Methylocystis sp. ATCC 49242] gi|322395087|gb|EFX97646.1| flagella basal body P-ring formation protein FlgA [Methylocystis sp. ATCC 49242] Length = 159 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 12/151 (7%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIR-GNYA 61 VR FF + ++L + A V VP V I G+ + + L+E N R N A Sbjct: 9 VRSFTFFVVASMTLTLVAARAQESQVPVPRVTIYPGDQITDQVLEE-----KNYRLPNGA 63 Query: 62 HSI-----KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 ++ +VG V RR LLP IP + P+V+ GA+VRI+ ++G M I+T G+A Sbjct: 64 DALVFLSRTGLVGKVARRTLLPGQPIPTIAVDNPHVVKVGAQVRIVFSEGGMQITTYGVA 123 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++GDVI V+N ++G+ +SG V G++ Sbjct: 124 QQSGAVGDVIRVRNQESGLFISGRVQSDGSI 154 >gi|319781680|ref|YP_004141156.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167568|gb|ADV11106.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 175 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 ++PS VI GE +N + LK++ V + A +++ G V +R LLP IP + + Sbjct: 51 LIPSRVIYPGETINLAALKQVTLVVGKHKPEAVATRAEELDGKVAKRTLLPGRYIPSAAI 110 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +++ +GA V+I G +TIS + L + GD++ V+NID+G ++SG+V+ GT+ Sbjct: 111 REAWLVEQGASVQIFFIAGGLTISATAVTLQPGAAGDLVKVRNIDSGKILSGTVMADGTI 170 Query: 148 RV 149 +V Sbjct: 171 QV 172 >gi|27381983|ref|NP_773512.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium japonicum USDA 110] gi|27355153|dbj|BAC52137.1| flgA [Bradyrhizobium japonicum USDA 110] Length = 175 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 3/123 (2%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+V I AGE++ + + E + N+ G + + +VG + RR LLP IP + + Sbjct: 51 VPAVSIRAGELIRDDMITE-RAFAPNLLGVAQFIEGRQILVGRMARRALLPGQPIPTNSV 109 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P+ ++RGA V++++ ++I T G A+ + G +I V+N DTGV++ G V GTV Sbjct: 110 EDPWTVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALIPVRNTDTGVIIRGVVQPDGTV 169 Query: 148 RVV 150 +VV Sbjct: 170 KVV 172 >gi|296447437|ref|ZP_06889362.1| flagella basal body P-ring formation protein FlgA [Methylosinus trichosporium OB3b] gi|296255057|gb|EFH02159.1| flagella basal body P-ring formation protein FlgA [Methylosinus trichosporium OB3b] Length = 149 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 P VVI GE + + L E + N G + ++G V RR LLPD IP+ + P Sbjct: 29 PRVVIYPGEAIRDDMLAE-RAFNGGAAGVVVETRSALIGKVARRTLLPDRPIPVMAVDSP 87 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +++ A+V+I+ +TI G AL +GD I V+N D+G++V+G V G++RV Sbjct: 88 RIVAVNAQVKIVFEVTGLTIVAYGAALQAGGVGDFIRVRNQDSGLVVTGRVQPDGSIRV 146 >gi|13472577|ref|NP_104144.1| flagellar basal body P-ring biosynthesis protein FlgA [Mesorhizobium loti MAFF303099] gi|14023323|dbj|BAB49930.1| flagellar protein; FlgA [Mesorhizobium loti MAFF303099] Length = 174 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 ++P+ VI GE + + LK++ + + + A +++ G + +R LLP IP + + Sbjct: 50 LIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAAI 109 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +++ +GA V++ G +TI+ + L S GD+I V+N D+G ++SG+V+ GT+ Sbjct: 110 REAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTI 169 Query: 148 RV 149 +V Sbjct: 170 QV 171 >gi|158422257|ref|YP_001523549.1| flagellar basal-body P-ring formation protein [Azorhizobium caulinodans ORS 571] gi|158329146|dbj|BAF86631.1| flagellar basal-body P-ring formation protein [Azorhizobium caulinodans ORS 571] Length = 190 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+V I G+ +++S L + V+ S+ R A S + ++G V RR L IP++ Sbjct: 67 VPAVAIYPGDTISDSMLVDRAYSVSPSD-RVAVATSRQALIGKVARRGLQAGTPIPVNAY 125 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P V+SRG ++L +G +TIS +A+ D S+G ++ +KN+D+G++++G+V G+V Sbjct: 126 ADPQVVSRGHLAPVVLQEGGLTISGFAMAMEDGSVGKIVRLKNLDSGLIIAGTVQSDGSV 185 Query: 148 RV 149 RV Sbjct: 186 RV 187 >gi|163850064|ref|YP_001638107.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium extorquens PA1] gi|240137198|ref|YP_002961667.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens AM1] gi|254559210|ref|YP_003066305.1| flagella basal body p ring formation protein FlgA [Methylobacterium extorquens DM4] gi|163661669|gb|ABY29036.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium extorquens PA1] gi|240007164|gb|ACS38390.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens AM1] gi|254266488|emb|CAX22252.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens DM4] Length = 164 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+V I G+ + ES L+ MQ + R A + + G V RR+LLP +P++ + Sbjct: 41 VPTVTIYPGDTIKESMLR-MQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAV 99 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++SRGA ++I + + I+ G L + +G+ I V+N DT ++ G+V+ G + Sbjct: 100 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRI 159 Query: 148 RV 149 R+ Sbjct: 160 RI 161 >gi|218528667|ref|YP_002419483.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] gi|218520970|gb|ACK81555.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] Length = 164 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+V I G+ + ES L+ MQ + R A + + G V RR+LLP +P++ + Sbjct: 41 VPTVTIYPGDTIKESMLR-MQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAV 99 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++SRGA ++I + + I+ G L + +G+ I V+N DT ++ G+V+ G + Sbjct: 100 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRI 159 Query: 148 RV 149 R+ Sbjct: 160 RI 161 >gi|260466618|ref|ZP_05812806.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium opportunistum WSM2075] gi|259029624|gb|EEW30912.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium opportunistum WSM2075] Length = 182 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIPLSVL 87 ++P+ VI GE + + LK++ + + ++ +++ G V +R LLP IP + + Sbjct: 58 LIPNRVIYPGETIELTALKQVTLIPGKHKPEAMATVAEELQGKVAKRTLLPGRYIPSTAI 117 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +++ +GA V++ G +TIS + L S GD+I V+N D+G ++SG+V+ GT+ Sbjct: 118 RDAWLVEQGAAVQVFFISGGLTISATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTI 177 Query: 148 RV 149 +V Sbjct: 178 QV 179 >gi|170741837|ref|YP_001770492.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] gi|168196111|gb|ACA18058.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] Length = 176 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+++ E+ L+E + R + +VG V RR LLP +P++ + Sbjct: 52 VPAVTIYPGDMIKETMLREQSFPPTFRARAAVIDAPLAIVGRVARRTLLPGEPVPVNAVD 111 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++SRG +I + + I+T G L + +G+VI V+N DTG +V G V G +R Sbjct: 112 DPRLVSRGTPTTMIFEENGLIITTLGTPLQNGGLGEVIRVRNTDTGRIVVGVVQGDGRIR 171 Query: 149 V 149 + Sbjct: 172 I 172 >gi|90422611|ref|YP_530981.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisB18] gi|90104625|gb|ABD86662.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18] Length = 161 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 9/125 (7%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS---NIRG--NYAHSIKDVVGLVTRRVLLPDHVIPL 84 VP+ VI G+++ + EM + S N+ G + VVG + RR LLP +IP+ Sbjct: 38 VPATVIYPGDLIKD----EMIIDRSFAPNLPGVAAFVGDRPAVVGRIARRTLLPGQLIPI 93 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + L ++SRG+ V++++ G+++I T G +L S G +I ++N+DTGV + G V Sbjct: 94 NALEEQKLVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGSMIQLRNLDTGVTIRGIVQPD 153 Query: 145 GTVRV 149 G+VR+ Sbjct: 154 GSVRI 158 >gi|118589980|ref|ZP_01547384.1| flagellar basal body P-ring biosynthesis protein A [Stappia aggregata IAM 12614] gi|118437477|gb|EAV44114.1| flagellar basal body P-ring biosynthesis protein A [Stappia aggregata IAM 12614] Length = 151 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%) Query: 7 LLFFSLYVLSLDSLFASVIGHAV------VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 +L SL+ L+L +F++ A VP I AG ++ L E + + Sbjct: 1 MLIRSLF-LALVLVFSTAAARAAGGIDLPVPRQTIQAGTEISHQDLIERSFPTRTAQ-QF 58 Query: 61 AHSIK--DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 A S +VG+V RR LLP +P+S + +P ++ RG R++ + + I AL Sbjct: 59 AVSTNRGQLVGMVARRTLLPGQPVPISSVEKPVLVRRGEPARLVFREQGLMIIMQVEALQ 118 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G+ + V+N+D+G++VSG V + GT+RV Sbjct: 119 NGGAGNFVRVRNVDSGLVVSGRVQEDGTIRV 149 >gi|328545504|ref|YP_004305613.1| flagellar basal body P-ring biosynthesis protein-like protein [polymorphum gilvum SL003B-26A1] gi|326415245|gb|ADZ72308.1| Flagellar basal body P-ring biosynthesis protein-like protein [Polymorphum gilvum SL003B-26A1] Length = 154 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP V I+ G+ + L E + + R +A S +D+VG+V RR LLP +PL + Sbjct: 32 VPRVTIHPGDEIGADLLIERRFPANTTR-QFAIVTSPRDLVGMVARRTLLPGQPVPLGAV 90 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ RG R++ +G + I T AL G V+ V+N+D+GV+V+G+V G++ Sbjct: 91 APVMLVKRGEPARLVFKEGGLFIMTQVEALQSGGAGAVVRVRNVDSGVIVTGTVQADGSI 150 >gi|188579868|ref|YP_001923313.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium populi BJ001] gi|179343366|gb|ACB78778.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium populi BJ001] Length = 162 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+V I G+ + +S L+ MQ + R A + + G RR+LLP +P++ + Sbjct: 39 VPTVTIYPGDTIKDSMLR-MQAYPATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAV 97 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++SRGA ++I + + I+ G L + +G+ I V+N DT +V G+V G + Sbjct: 98 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIVLGTVTADGRI 157 Query: 148 RV 149 R+ Sbjct: 158 RI 159 >gi|23008124|ref|ZP_00049700.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magnetotacticum MS-1] Length = 158 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAV-----------VPSVVINAGEVLNESRLKEMQVTN 53 R LF L + L A+ HAV VP+V I G+ + E+ L+ MQ Sbjct: 3 RTPLFRGLLIACL----AAGPAHAVEGMAGGELMLPVPTVTIYPGDTIKETMLR-MQAYP 57 Query: 54 SNIRGNYA--HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 + R A + + G RR+LLP +P++ + P ++SRG ++I + + I+ Sbjct: 58 ATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAVDDPRLVSRGTPTQMIFEENGLVIT 117 Query: 112 TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G L + +G+ I V+N DT +V G+V+ G +R+ Sbjct: 118 AIGAPLQNGGLGETIRVRNTDTNRIVLGTVMADGRIRI 155 >gi|294853177|ref|ZP_06793849.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294818832|gb|EFG35832.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 163 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 52/87 (59%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L Sbjct: 3 SLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVA 62 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 GD I V+N+D+G++VSG+V+ G ++V Sbjct: 63 GDFIKVRNVDSGIIVSGTVLANGRIQV 89 >gi|254500840|ref|ZP_05112991.1| flagella basal body P-ring formation protein FlgA [Labrenzia alexandrii DFL-11] gi|222436911|gb|EEE43590.1| flagella basal body P-ring formation protein FlgA [Labrenzia alexandrii DFL-11] Length = 152 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 LLFFSLYVLSL-DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 L+ F L +L+ S FA+ I V + E+ + ++ + + + A Sbjct: 7 LVAFCLAMLTAAPSAFAASIELPVARQTIPAGSEIGHRDLVERKFPSRTATQFAVASHRS 66 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +VG VTRR LLP IP++ + +P ++ RG R++ + + I AL + G Sbjct: 67 QLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGGAGSF 126 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149 + V+N+D+G++VSG V GT+RV Sbjct: 127 VRVRNVDSGLVVSGRVQQDGTIRV 150 >gi|90418391|ref|ZP_01226303.1| putative flagellar basal body P-ring formation protein [Aurantimonas manganoxydans SI85-9A1] gi|90338063|gb|EAS51714.1| putative flagellar basal body P-ring formation protein [Aurantimonas manganoxydans SI85-9A1] Length = 165 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP+ VI G+ + L K V + I G YA +VG V RR LLP I LS L Sbjct: 43 VPTTVIYPGQSVTGPGLHHKAFYVKDDKI-GLYAVDDSALVGRVARRTLLPGKAIRLSDL 101 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ GA V ++ ++ + I+ G AL A G+ + V+N D+G++VSG V G++ Sbjct: 102 KEPDLVRAGAAVTLVYSEAGLVITGQGTALRSAGAGETVRVRNADSGIIVSGIVSADGSI 161 Query: 148 RV 149 R+ Sbjct: 162 RI 163 >gi|170748106|ref|YP_001754366.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium radiotolerans JCM 2831] gi|170654628|gb|ACB23683.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium radiotolerans JCM 2831] Length = 142 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP I AG+V+ + L+E R A + VG + RR LLP IP L Sbjct: 19 VPVATIYAGDVIKPTMLREQAFPEGYRPRLPVADTAARAVGRIARRTLLPGETIPSIALE 78 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +++RGA I+ + +TIST G AL++A++ + + V+N TG +V G V G VR Sbjct: 79 EAKLVTRGAPAVIVFEEHGVTISTVGTALANAAVNEAVNVRNAATGRVVQGIVQPDGRVR 138 >gi|319405402|emb|CBI79021.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp. AR 15-3] Length = 152 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +VP I AG+ +++ L E S+ Y +K ++ V +R L I LS L Sbjct: 29 LVPDKSIYAGQRISDIGLSEKHFFIKSDAASLYVMDMKQILHKVAKRTLTAGRPISLSSL 88 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V+G+V+ G V Sbjct: 89 GDPVLVERGQATKLIFQAHNLQITALGVVLQSGSSGDVIRVRNSDSGRVVTGTVLQNGDV 148 Query: 148 RV 149 RV Sbjct: 149 RV 150 >gi|319898638|ref|YP_004158731.1| flagella basal body P-ring formation protein FlgA [Bartonella clarridgeiae 73] gi|319402602|emb|CBI76147.1| Flagella basal body P-ring formation protein FlgA [Bartonella clarridgeiae 73] Length = 152 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L Sbjct: 22 YADRIGF-LVPDKSIYAGQRISDIGLSERHFFIKSDAASLYVTDMKQILHKVAKRTLTAG 80 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V+G Sbjct: 81 RPIALSSLGDPVLVERGQATKLIFQTHNLKITALGVVLQSGSSGDVIRVRNSDSGRVVTG 140 Query: 140 SVVDTGTVRV 149 +V+ G VRV Sbjct: 141 TVLQNGDVRV 150 >gi|312115248|ref|YP_004012844.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium vannielii ATCC 17100] gi|311220377|gb|ADP71745.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium vannielii ATCC 17100] Length = 155 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 62/120 (51%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP + G+V+ E L Q++ + + VVG +RR LLP IP + Sbjct: 35 VPKRALYPGDVITEEMLTSKQLSENENASAFITEASGVVGKTSRRTLLPGLPIPKVAIRE 94 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P V+ +G V ++ + I+ +AL S+G+ I+ +N D+GV++ G V+ G+VRV Sbjct: 95 PVVVRQGKAVSLVYESDTVRITGLAMALQSGSVGETISARNPDSGVVIHGVVMADGSVRV 154 >gi|218460754|ref|ZP_03500845.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli Kim 5] Length = 95 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 46/63 (73%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I + Sbjct: 33 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTIAV 92 Query: 85 SVL 87 S L Sbjct: 93 SGL 95 >gi|319406977|emb|CBI80614.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp. 1-1C] Length = 152 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L Sbjct: 22 YADRIGF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAVSLYVTDMKQILHKVAKRTLTAG 80 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V+G Sbjct: 81 RPISLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQSGSSGDVIRVRNSDSGRVVTG 140 Query: 140 SVVDTGTVRV 149 +V+ G VRV Sbjct: 141 TVLQNGDVRV 150 >gi|121602252|ref|YP_989399.1| flagellar basal body P-ring biosynthesis protein FlgA [Bartonella bacilliformis KC583] gi|120614429|gb|ABM45030.1| flagella basal body P-ring formation protein FlgA [Bartonella bacilliformis KC583] Length = 152 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIKDV 67 FFSL +L+ + +A + +VP I G+ +++ L E + S Y +K V Sbjct: 12 FFSLCLLT--AAYADRVSF-LVPERSIYVGQRVSDVGLSEKNFIIKSEAASLYVIDMKQV 68 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 + V R L I L+ L P ++ RG +++I N+ I+ G+ L S GDV+ Sbjct: 69 LNKVATRPLRAGRPIALTALGDPVLVERGQTIKLIFQSDNLQITAIGVVLQSGSSGDVVR 128 Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149 V+N D+G +V G+V+ G+VRV Sbjct: 129 VRNADSGRIVMGTVLQNGSVRV 150 >gi|319403962|emb|CBI77550.1| Flagellar protein flgA (fragment) [Bartonella rochalimae ATCC BAA-1498] Length = 109 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 51/90 (56%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y +K ++ V +R L IPLS L P ++ RG ++I N+ I+ G+ L Sbjct: 18 YVTDMKQILHKVAKRTLTAGRPIPLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQS 77 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 S GDVI V+N D+G +V+G+V+ G VRV Sbjct: 78 GSSGDVIRVRNSDSGRVVTGTVLQNGDVRV 107 >gi|327478805|gb|AEA82115.1| SAF domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 267 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++L V S S++ + HA +I G+ L L+ + + Y H +++V G Sbjct: 130 WTLEVTSQPSVWLPAV-HA---QGIIERGQTLGRDDLRLEPINIGKAQRGYFHRLEEVQG 185 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + +R + + S+L +P + RG V+I+ + + ST G AL+D G+VI V+ Sbjct: 186 MAAKRRIRAGQTLTPSLLAQPLAVRRGQPVKIVASHDGIEASTNGEALADGQPGEVIRVR 245 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ +G ++ VV+ G V Sbjct: 246 NVRSGKVIDAKVVEEGVV 263 >gi|296283229|ref|ZP_06861227.1| flagellar basal body P-ring biosynthesis protein FlgA [Citromicrobium bathyomarinum JL354] Length = 156 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 5/136 (3%) Query: 19 SLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 +L A G VV V+ I G++L+E +VT + RG+ A + G+ RR Sbjct: 22 ALHAQSTGDGVVADVLTRPIQRGDLLSERDFAPEEVTAAQARGSLA--AQQAAGMEARRT 79 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L + S L P ++ RG V+I + +G +TI+ G AL+DA++G+ + V + T Sbjct: 80 LRAGMPVRASDLAEPRLVKRGETVKISVREGALTITAMGRALADAALGEQVRVFSEATNQ 139 Query: 136 MVSGSVVDTGTVRVVV 151 + G V GTVRV+ Sbjct: 140 TLQGVVEGAGTVRVLA 155 >gi|319409186|emb|CBI82830.1| Flagella basal body P-ring formation protein FlgA [Bartonella schoenbuchensis R1] Length = 152 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +VP+ + AG+ +++ L E S YA + ++ V +R L I L+ L Sbjct: 29 IVPNKSVYAGQRVSDVGLSEKSFFIKSEAASLYATQMNQLLNKVAKRTLTAGRPISLASL 88 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ RG ++I N+ I+ G+ L S GD+I V+N D+G +V G+V+ G V Sbjct: 89 GDPVLVERGQTTKLIFQMNNLQITALGVVLQSGSSGDLIRVRNADSGRIVMGTVLQNGDV 148 Query: 148 RV 149 RV Sbjct: 149 RV 150 >gi|121534937|ref|ZP_01666756.1| SAF domain [Thermosinus carboxydivorans Nor1] gi|121306536|gb|EAX47459.1| SAF domain [Thermosinus carboxydivorans Nor1] Length = 245 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 57/112 (50%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I A E+L L+ + + Y + V+GL RR L P VI SVL +P +I Sbjct: 125 IAAWEILTADSLQRERRDVGKLASGYITDEQKVLGLAARRSLTPGAVITDSVLAKPVLIR 184 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 RG + II G + + AG AL D + G VI V+NI + ++S V+D + Sbjct: 185 RGQLIAIIARSGGIEVVAAGQALQDGAEGQVIRVQNIQSKKILSAQVLDNAS 236 >gi|304310781|ref|YP_003810379.1| Flageller protein FlgA [gamma proteobacterium HdN1] gi|301796514|emb|CBL44722.1| Flageller protein FlgA [gamma proteobacterium HdN1] Length = 227 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 4/125 (3%) Query: 27 HAVVPSVVINAGEVLNES--RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +AV+ + I+ G++++ L+E ++T S G Y I D GL+ +R + + V+ Sbjct: 103 NAVIAKIPISRGQIIDTQAVELRETEITPS-ASGFYTR-ISDTKGLLAKRSIAANQVLTH 160 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 ++L P VI RG V I +I TAG+AL+ +IG+++ VKN +G V G+++ Sbjct: 161 TMLKNPDVIQRGQAVIIEAGNTQFSIRTAGVALASGAIGEIVRVKNSTSGRTVEGTIISD 220 Query: 145 GTVRV 149 T+ + Sbjct: 221 NTINI 225 >gi|289208108|ref|YP_003460174.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio sp. K90mix] gi|288943739|gb|ADC71438.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio sp. K90mix] Length = 244 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+YV +A V+ V S + + L+ ++ S G+Y S ++VG Sbjct: 107 WSIYVPVTVERYAEVL----VASRTLRRQHTILPGDLRTKRIQTSRHAGSYFESKNELVG 162 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L TRR + ++ + + V+SRG +V I+ G++ I G AL + +GD I VK Sbjct: 163 LQTRRNIRSGQILGQQHVTQREVVSRGQRVTILAENGSVVIRMQGEALENGILGDRIRVK 222 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +V G V+++G VRV Sbjct: 223 NSSSGRVVEGEVLESGHVRV 242 >gi|157147106|ref|YP_001454425.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter koseri ATCC BAA-895] gi|157084311|gb|ABV13989.1| hypothetical protein CKO_02883 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 61/116 (52%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G+VL+ S + ++ S+ RGNY + +GL +R + I L+ L P ++ Sbjct: 143 LERGQVLSASDVSIKKLNISSTRGNYLTDPDEAIGLTVKRRIRELQPITLTQLESPVLVE 202 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 RG +V +I QG + T G A+ G++I VKN + +VS V D G V++V Sbjct: 203 RGQRVLMIAEQGGVEARTMGEAMKKGRKGEMIKVKNESSERVVSAIVADAGVVKMV 258 >gi|94267695|ref|ZP_01290964.1| Flageller protein FlgA [delta proteobacterium MLMS-1] gi|93451897|gb|EAT02628.1| Flageller protein FlgA [delta proteobacterium MLMS-1] Length = 242 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 65/127 (51%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G VV + IN GE++ L + SN+ GN+ ++ VG R + P V+ Sbjct: 116 MGEVVVSARRINRGELIGSDDLMVQRRNISNLDGNFVSDPREAVGKQLRTTIQPGAVLHQ 175 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L +P ++ RG +VRII QG + +S G + G+++ V+N+ + + V+D Sbjct: 176 SRLEKPPLVRRGDRVRIIAHQGRVRVSAPGEVRDLGAEGELVRVRNLMSRQEIQARVIDG 235 Query: 145 GTVRVVV 151 TV ++ Sbjct: 236 STVETIL 242 >gi|325295400|ref|YP_004281914.1| flagella basal body P-ring formation protein FlgA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065848|gb|ADY73855.1| flagella basal body P-ring formation protein FlgA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 321 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+++ S +K +V + R + A S+ +V+G + +R + VI ++ L YV+ Sbjct: 205 IPKGKLITYSDVKIEKVPSKKARKS-AISLNEVIGKIAKRDIKKGEVIKITDLSPNYVVW 263 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 R V+II N+ I GIAL + +IGD+I +KNI TG ++ V+ G V+ V K Sbjct: 264 RNKPVKIIYDIHNIHIELLGIALENGAIGDIIRIKNISTGKVLICKVIGNGIVKFVYK 321 >gi|218677622|ref|ZP_03525519.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli CIAT 894] Length = 66 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 44/66 (66%) Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + Y ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ GT Sbjct: 1 MREAYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLADGT 60 Query: 147 VRVVVK 152 + V K Sbjct: 61 IHVRAK 66 >gi|254473303|ref|ZP_05086700.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp. JE062] gi|211957419|gb|EEA92622.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp. JE062] Length = 124 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +P+++I G+ + E L+E ++ + + + ++DVVGL RR L P IP + + Sbjct: 1 MPAMMIYPGDKIEEGMLREHGFFKKSVAQLSIVNRMQDVVGLEARRTLFPGKPIPKNAVQ 60 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P V+ RG+ V ++ + + I A +IG I +N DTG+ V G V + G++ Sbjct: 61 DPVVVKRGSSVLLVFKEEGLEIRAIVEAQESGAIGANIRARNPDTGLSVLGKVQEDGSL 119 >gi|330830309|ref|YP_004393261.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas veronii B565] gi|328805445|gb|AEB50644.1| Flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas veronii B565] Length = 227 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G++L+ES+L + IRG+Y +VG+ ++R L P I LS + V+ Sbjct: 114 IAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVGVRSKRELKPGQPIRLSQVC---VVC 170 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +G +V + N I T AL D S G++I + NI +G V G V G V V Sbjct: 171 KGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLVNIRSGKTVEGKVSAVGAVSV 225 >gi|300024605|ref|YP_003757216.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium denitrificans ATCC 51888] gi|299526426|gb|ADJ24895.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium denitrificans ATCC 51888] Length = 153 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 7/143 (4%) Query: 4 VRFLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-- 59 ++ L +L+VL L ++ + VP+ VI G+++ L + QV S+ GN Sbjct: 2 MKSLALGTLFVLGLAGAASADDALRTVFVPNNVIYPGDMITADALVQRQVRVSS--GNMA 59 Query: 60 -YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 + + KD++G + RR LL + +P S + + +G ++I +++I GIA Sbjct: 60 VFGENPKDLIGKMARRTLLRNEYVPRSAVREQDAVLQGKPYKVIYNSESLSIVGEGIAQK 119 Query: 119 DASIGDVIAVKNIDTGVMVSGSV 141 ++GD+I+V+N TGVM V Sbjct: 120 AGAVGDIISVRNTATGVMFKARV 142 >gi|307945667|ref|ZP_07661003.1| flagella basal body P-ring formation protein FlgA [Roseibium sp. TrichSKD4] gi|307771540|gb|EFO30765.1| flagella basal body P-ring formation protein FlgA [Roseibium sp. TrichSKD4] Length = 326 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 35 INAGEVLNESRLKEMQVTN---SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + +G+VL RL++M T + + N K + GL R L + + + +P Sbjct: 197 LRSGQVL---RLEDMTTTRLPRTKVPANAVTDPKQIAGLAARTGLRANMPLVRNDFAKPV 253 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +ISRG KV I G M ++T G A+ D ++GD I +KN+D+G +V V G V Sbjct: 254 LISRGEKVSITYMVGGMKLTTRGRAMDDGALGDPIDIKNLDSGRIVPAMVRSRGQV 309 >gi|115523180|ref|YP_780091.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisA53] gi|115517127|gb|ABJ05111.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53] Length = 161 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 50/83 (60%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR LLP +IP + + +++RG+ V++++ G ++I T G +L G I Sbjct: 76 VVGRTARRTLLPGRLIPNNAVEDQKIVNRGSVVKVVIEDGALSIVTYGSSLQSGGPGAFI 135 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 ++N+DTGV + G V G+VR+ Sbjct: 136 QLRNLDTGVTIRGIVQPDGSVRI 158 >gi|302037629|ref|YP_003797951.1| putative flagella basal body P-ring formation protein FlgA [Candidatus Nitrospira defluvii] gi|300605693|emb|CBK42026.1| putative Flagella basal body P-ring formation protein FlgA [Candidatus Nitrospira defluvii] Length = 265 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 60/121 (49%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VVP I E + + ++ +++ + S +V+G R L P + I + + Sbjct: 143 VVPVRSIKVDEEIAADDVTTERIVLYDLKQPFVTSPAEVIGKAAIRPLPPQNAIRTTSVR 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 RP+ + +G +V I QG ++I T G+ S +G I V N+D+G + +VV G VR Sbjct: 203 RPFAVHKGDRVTIEARQGGLSIQTVGVTKSHGELGQTITVSNVDSGKELRATVVAPGVVR 262 Query: 149 V 149 V Sbjct: 263 V 263 >gi|261341498|ref|ZP_05969356.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316] gi|288316294|gb|EFC55232.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316] Length = 261 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 55/116 (47%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 + G V+ S + + SN+R Y DVVGL +R + + LS L P ++ Sbjct: 140 TLERGHVMTASDITRRKFNISNLRSGYITRPDDVVGLTLKRRIRELQPLSLSQLDSPVMV 199 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 RG +V +I Q + T GIA G++I VKN + V+ V+D G VR Sbjct: 200 ERGQRVLMIADQDGVEARTMGIASKKGRKGEMIKVKNESSEREVTAMVIDMGVVRT 255 >gi|328543155|ref|YP_004303264.1| flagellar protein FlgA [polymorphum gilvum SL003B-26A1] gi|326412901|gb|ADZ69964.1| flagellar protein FlgA [Polymorphum gilvum SL003B-26A1] Length = 322 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G +L L +++ + S ++VGL R L P + + RP +++ Sbjct: 193 IGRGSILKPEDLTVIRLPRQRVPSRAVTSPDEIVGLAARTTLRPGQPLSRTDFERPLIVA 252 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 RG KV ++ M ++ G A+S + GD I V N+ + +++G+VV G +RV Sbjct: 253 RGEKVTLLYEMSGMKLTARGQAMSAGAEGDEIDVMNLQSRRIITGTVVARGQIRV 307 >gi|145298485|ref|YP_001141326.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas salmonicida subsp. salmonicida A449] gi|142851257|gb|ABO89578.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas salmonicida subsp. salmonicida A449] Length = 339 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G++L+ES L + IRG+Y ++G+ ++R L P I LS + V+ Sbjct: 226 VAKGDILSESVLTLAYQDQTQIRGDYLSDQAPLIGVRSKRELKPGQPIRLSQV---CVVC 282 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +G +V + +M I T AL D S GD+I++ NI +G V G V G+V Sbjct: 283 KGDQVTLSAENSSMQIKTMARALQDGSFGDMISLVNIRSGKTVQGKVSAVGSV 335 >gi|94263286|ref|ZP_01287102.1| Flageller protein FlgA [delta proteobacterium MLMS-1] gi|93456369|gb|EAT06493.1| Flageller protein FlgA [delta proteobacterium MLMS-1] Length = 242 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 63/127 (49%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G VV + IN GE++ L + SN+ N+ ++ VG R + P V+ Sbjct: 116 MGEVVVSARRINRGELIGSDDLMVQRRNISNLDSNFVSDPREAVGKQLRTTIQPGAVLHQ 175 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L P ++ RG +VRII QG + +S G + G+++ V+N+ + + V+D Sbjct: 176 SRLENPPLVRRGDRVRIIAHQGRVRVSAPGEVRDIGAEGELVRVRNLMSRQEIQARVIDG 235 Query: 145 GTVRVVV 151 TV ++ Sbjct: 236 STVETIL 242 >gi|330501133|ref|YP_004378002.1| SAF domain-containing protein [Pseudomonas mendocina NK-01] gi|328915419|gb|AEB56250.1| SAF domain-containing protein [Pseudomonas mendocina NK-01] Length = 234 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+ L S+F V+ HA + VI G+ ++ +L+ +V + +S +VVG Sbjct: 96 WSVTALVQASVFLPVV-HA---ARVIERGQTISAEQLQLQEVNIGKAPRGFYNSFDEVVG 151 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I ++L P +I RG +V I+ +Q ++ S G AL++ GDVI V+ Sbjct: 152 QGAKRRVRAGQLIAPNLLTAPLLIRRGQQVTIVASQDGISASATGEALANGREGDVIRVR 211 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ + ++ VV+ G V Sbjct: 212 NLGSQKVIEAQVVEDGVV 229 >gi|119477961|ref|ZP_01618061.1| flagellar basal body P-ring biosynthesis protein [marine gamma proteobacterium HTCC2143] gi|119448874|gb|EAW30116.1| flagellar basal body P-ring biosynthesis protein [marine gamma proteobacterium HTCC2143] Length = 237 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +SLY+ +L+ V+ A++P I G ++ L+ ++ S + G Y S V+ Sbjct: 99 LWSLYIPVDVNLYKPVV-TAIIP---IAKGSIVTRESLEMREMNISKLTGTYFVSSDAVI 154 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G+ +R L + + + L +P +I RG V + GN+ + GIAL++ G I++ Sbjct: 155 GMQAKRPLRANAPVIATHLQQPLLIKRGESVVMTARSGNLVVKIPGIALTNGHRGQQISI 214 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 +N + +V G V G V +V+ Sbjct: 215 RNSQSKRIVEGKVSAQGQVMIVM 237 >gi|311992321|gb|ADQ26734.1| chaperone for P-ring biosynthesis protein [Aeromonas hydrophila] Length = 284 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 S + G++L+E L + + IRG+Y ++G+ ++R L P I LS + Sbjct: 168 STPVAKGDILSEGVLTQAYQDQTLIRGDYLSDTTALIGVRSKRELKPGQPIRLSQV---C 224 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ +G +V + +M I T AL D S GD+I + NI +G V G V G+V Sbjct: 225 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVNAVGSV 280 >gi|83944161|ref|ZP_00956617.1| Flageller protein FlgA [Sulfitobacter sp. EE-36] gi|83845028|gb|EAP82909.1| Flageller protein FlgA [Sulfitobacter sp. EE-36] Length = 227 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGL 70 ++ L++ +L V +VP ++ A +V L EM + G+YA + + +VG Sbjct: 94 VWGLAMVTLTVPVPNRRIVPDEIVRAQDV----SLVEMPMQRV---GSYAINEYEQLVGQ 146 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 RR+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N Sbjct: 147 QVRRMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVN 206 Query: 131 IDTGVMVSGSVVDTGTVRVV 150 + + +S + G V VV Sbjct: 207 LSSNKALSTIAMAAGVVEVV 226 >gi|148360444|ref|YP_001251651.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila str. Corby] gi|296106491|ref|YP_003618191.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila 2300/99 Alcoy] gi|148282217|gb|ABQ56305.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila str. Corby] gi|295648392|gb|ADG24239.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila 2300/99 Alcoy] gi|307609702|emb|CBW99212.1| hypothetical protein LPW_09931 [Legionella pneumophila 130b] Length = 233 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 4/148 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ ++LY+ ++F SV+ V + G ++ S + + ++ ++ Y Sbjct: 89 CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ + ++ Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEGAL 204 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 GD + VKN+ + ++ V TV+V+ Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVI 232 >gi|146305246|ref|YP_001185711.1| SAF domain-containing protein [Pseudomonas mendocina ymp] gi|145573447|gb|ABP82979.1| SAF domain protein [Pseudomonas mendocina ymp] Length = 281 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 4/128 (3%) Query: 22 ASVIGHAVVPSVVINAGEVL--NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 ASV AV + VI G+ + + +L+E+ V S+ RG Y+ S+ +VVG +R + Sbjct: 151 ASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSS-RGFYS-SLDEVVGQGAKRRIRAG 208 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 +I S+L P ++ RG +V I+ Q ++ S G AL + G+VI V+N+ + ++ Sbjct: 209 ALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKVIEA 268 Query: 140 SVVDTGTV 147 VV+ G V Sbjct: 269 QVVEEGVV 276 >gi|87119683|ref|ZP_01075580.1| flagellar protein, putative [Marinomonas sp. MED121] gi|86165159|gb|EAQ66427.1| flagellar protein, putative [Marinomonas sp. MED121] Length = 242 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 3/123 (2%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A+ P I + +NES +V + +RG + GL+ +R + + I + Sbjct: 121 KAITP---IRRKQTINESNTVIAKVDLTQVRGQIYSPNQAPYGLIAKRNININTFITKQL 177 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 P ++ RG + I G + + GIA D ++G I VKNI +G V G VV G Sbjct: 178 TELPIIVKRGQNILISAQSGQINVRMNGIAAEDGTLGQQIKVKNISSGRFVYGKVVSEGE 237 Query: 147 VRV 149 +RV Sbjct: 238 IRV 240 >gi|117619788|ref|YP_857349.1| flagella basal body P-ring formation protein FlgA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561195|gb|ABK38143.1| flagella basal body P-ring formation protein FlgA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 285 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 S + G++L+E L + + +RG+Y ++G+ ++R L P I LS + Sbjct: 169 STPVAKGDILSEGVLTQAYQDQTLMRGDYLSDTTALIGVRSKRELKPGQPIRLSQV---C 225 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ +G +V + +M I T AL D S GD+I + NI +G V G V G+V Sbjct: 226 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVNAVGSV 281 >gi|254785365|ref|YP_003072794.1| flagella basal body P-ring formation protein FlgA [Teredinibacter turnerae T7901] gi|237683904|gb|ACR11168.1| flagella basal body P-ring formation protein FlgA [Teredinibacter turnerae T7901] Length = 228 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%) Query: 5 RFLLFFSLYVLSLDS--LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 R+ ++ + V + + + A IG I AG+V+ + ++ S++ G Y Sbjct: 89 RWTIYVPVQVETFEEVVIAAGAIGRGAQ----ITAGDVVTQ------RMNTSHLTGGYLR 138 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 VVGL RR+L P +I L+ + P V+ +G V + + + T AL++ + Sbjct: 139 DPARVVGLEARRMLRPGEIIKLNQVKAPDVVKKGQTVVLEARSSALRVVTEATALTNGGV 198 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G+ I V+N + +V V GTVRV Sbjct: 199 GEQIKVRNNRSQRIVDAQVTGPGTVRV 225 >gi|83955139|ref|ZP_00963795.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1] gi|83840468|gb|EAP79641.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1] Length = 227 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGL 70 ++ L++ +L V +VP ++ A +V L EM + G+YA + +VG Sbjct: 94 VWGLAMVTLTVPVPNRRIVPDEIVRAQDV----SLVEMPMQRV---GSYAINEYDQLVGQ 146 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 RR+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N Sbjct: 147 QVRRMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVN 206 Query: 131 IDTGVMVSGSVVDTGTVRVV 150 + + +S + G V VV Sbjct: 207 LSSNKALSTIAMAAGVVEVV 226 >gi|52841143|ref|YP_094942.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296929|ref|YP_123298.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila str. Paris] gi|52628254|gb|AAU26995.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750714|emb|CAH12121.1| hypothetical protein lpp0970 [Legionella pneumophila str. Paris] Length = 233 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 4/148 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ ++LY+ ++F SV+ V + G ++ S + + ++ ++ Y Sbjct: 89 CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ + ++ Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEGAL 204 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 GD + VKN+ + ++ V TV+V Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVT 232 >gi|163794153|ref|ZP_02188126.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199] gi|159180767|gb|EDP65286.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199] Length = 324 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 59/112 (52%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GEV++E+ ++ ++V + N ++D++G RR + I L+ + +VI +G Sbjct: 204 GEVISENDIQWLRVESRRASMNSVTRLEDLLGRTPRRPIAAGQPIRLTDVRPNFVIDKGD 263 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V I+L G MT++ A ++GD+I V+N + M+ V GTV + Sbjct: 264 MVTIVLNSGTMTLTARAEATQKGAVGDIIKVRNNHSRRMLEARVTGAGTVSI 315 >gi|307823527|ref|ZP_07653756.1| flagella basal body P-ring formation protein FlgA [Methylobacter tundripaludum SV96] gi|307735512|gb|EFO06360.1| flagella basal body P-ring formation protein FlgA [Methylobacter tundripaludum SV96] Length = 232 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%) Query: 19 SLFASVI----GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 S+F SVI VV S I GE++ L + S +R ++ ++ V R Sbjct: 96 SIFTSVIIKTYQMVVVLSQPIRRGEIITRQHLAIEKREVSKLREDFVIQMEQVENKQVTR 155 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L ++ L + P +I RG KV I T+ + +I G+A+ D + G +I+VKN ++G Sbjct: 156 QLDAGTILSLRNIAEPKLIKRGDKVVISTTKSDFSIKMNGVAMMDGTKGQLISVKNQNSG 215 Query: 135 VMVSGSVVDTGTVRV 149 +++ +V++ G V V Sbjct: 216 RIINATVIEPGLVSV 230 >gi|88811797|ref|ZP_01127051.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231] gi|88791188|gb|EAR22301.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231] Length = 244 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 +++ G + ++GL TRR + V+ +L +I RG ++ + T G+MT++ Sbjct: 147 TDLSGAWYTEPSQLLGLETRRAIRAGEVLSPQLLSSARLIRRGQELVLFATSGSMTVTVK 206 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G AL D GD++ V+N+ + +V G VV T V+V Sbjct: 207 GKALEDGVEGDIVRVRNLSSNRVVEGRVVGTDKVQV 242 >gi|54293884|ref|YP_126299.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila str. Lens] gi|53753716|emb|CAH15174.1| hypothetical protein lpl0940 [Legionella pneumophila str. Lens] Length = 233 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 74/148 (50%), Gaps = 4/148 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ ++LY+ ++F SV+ V + G ++ S + + ++ ++ Y Sbjct: 89 CLEENNHWTLYIPVKITIFKSVL----VAKRALLKGTKISNSDIYQTELDVQKLKQGYFT 144 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 K+++GLV + + P+ + + ++ +G +V II N+T+S G+A+ + ++ Sbjct: 145 DSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGVAMDEGAL 204 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 GD + VKN+ + ++ V TV+V Sbjct: 205 GDSVKVKNLSSKRIIEAQVTGKKTVKVT 232 >gi|114706772|ref|ZP_01439672.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina pelagi HTCC2506] gi|114537720|gb|EAU40844.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina pelagi HTCC2506] Length = 153 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 30 VPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VP VVI G+ + + L + V + + G + +D+ G V RR LLP I + L Sbjct: 31 VPGVVIYPGQDIVAAGLSTRTFIVKDEKV-GLFVVDREDLYGHVARRTLLPGKAIRRADL 89 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P + G V +I + + I+ G+AL G+ I V+N D+G+ +SG + GT+ Sbjct: 90 TTPDAVKAGTNVTLIYAEEGLVITGLGMALESGQEGETIRVRNTDSGITISGRISPDGTI 149 Query: 148 RV 149 V Sbjct: 150 AV 151 >gi|126668330|ref|ZP_01739289.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp. ELB17] gi|126627247|gb|EAZ97885.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp. ELB17] Length = 263 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 2/125 (1%) Query: 26 GHAVVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 G A+V S + GE L + + V N++ RG A + + ++G+ RR + +I Sbjct: 138 GPALVASRPLARGERLRADMVSLQTVVVNASRRGTIAEA-QSIIGMEVRRPINSGSLITP 196 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 +L P + RG V I + G+ T+S+ G AL++A+IG+ + V+N+ + + G V Sbjct: 197 DLLAAPDAVERGDHVMITASSGSFTVSSRGKALANAAIGEQVLVENLQSSRTIKGRVTAP 256 Query: 145 GTVRV 149 G V++ Sbjct: 257 GQVQI 261 >gi|291085839|ref|ZP_06354200.2| putative flagellar protein [Citrobacter youngae ATCC 29220] gi|291070006|gb|EFE08115.1| putative flagellar protein [Citrobacter youngae ATCC 29220] Length = 260 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V+P +I V+ L+ + SN R ++ + +GL ++R L P I S L Sbjct: 136 VMPKSLIARDTVITADDLQLKKFNISNQREGLMTNMDEAIGLTSKRALQPGKPITRSELV 195 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ R V I+ +T S G+AL + G+VI ++N + ++SG V DTG V Sbjct: 196 LPVLVKRDQPVMIVSHMAGITASMPGVALKNGRKGEVIKIRNSSSQRIISGVVDDTGVV 254 >gi|225850284|ref|YP_002730518.1| putative flagellar protein FlgA [Persephonella marina EX-H1] gi|225645553|gb|ACO03739.1| putative flagellar protein FlgA [Persephonella marina EX-H1] Length = 312 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 24/124 (19%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-----------LVTRRVLLPDHVIP 83 I GE++ E ++ ++ T+ N+R + IKD+VG ++T R+++PD Sbjct: 194 IKKGEIITEEDIRFIK-TDKNVRKPFT-DIKDIVGSTAKIDISENDVITERMVIPD---- 247 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 Y + R V++I ++ ++ I G+AL + +GD+I VKNI +G ++ V+ Sbjct: 248 -------YKVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKVLICKVIG 300 Query: 144 TGTV 147 TV Sbjct: 301 KDTV 304 >gi|23092309|gb|AAN08634.1| FlgA [Aeromonas hydrophila] Length = 339 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 3/116 (2%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 S + G++L+E L + IRG+Y ++G+ ++R L P I L+ + Sbjct: 223 SAPVAKGDILSEGMLTLAYQDQTLIRGDYLSDPTPLIGVRSKRELKPGQPIRLTQV---C 279 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ +G +V + +M I T AL D S GD+I + NI +G V G V G V Sbjct: 280 VVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLVNIRSGKTVQGKVSAVGAV 335 >gi|163782719|ref|ZP_02177715.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1] gi|159881840|gb|EDP75348.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1] Length = 211 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 48/86 (55%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S ++++ V R + V+ S L + ++ RG +V +I GN+ IS +G AL Sbjct: 123 ESTEELINYVALRTVKRGEVLVKSYLKKEPLVRRGQEVSVIYRSGNLEISFSGKALDTGF 182 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147 GDVI V++ +TG ++ G V+ G+V Sbjct: 183 YGDVIRVRSFNTGKVLRGRVISEGSV 208 >gi|117926378|ref|YP_866995.1| flagellar basal body P-ring biosynthesis protein-like protein [Magnetococcus sp. MC-1] gi|117610134|gb|ABK45589.1| Flagellar basal body P-ring biosynthesis protein-like protein [Magnetococcus sp. MC-1] Length = 236 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 8/106 (7%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 + +Q++ R Y ++++VG R + + + S P + RG +VR++L Sbjct: 132 WQTIQISREGFR--YVSDVREIVGKAASRPVRANIALQASWFEEPVAVERGDRVRVLLKD 189 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTG------VMVSGSVVDTG 145 G + I+T G+A D +G+ I V+N+ + VM G VV G Sbjct: 190 GALVINTVGVAGKDGRVGEAILVRNLSSNKSFLARVMAPGQVVAEG 235 >gi|315125980|ref|YP_004067983.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas sp. SM9913] gi|315014494|gb|ADT67832.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas sp. SM9913] Length = 253 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 +N G+VLN+ L+ V R I +VG +R + VI L + Y+I Sbjct: 136 TLNRGKVLNKQDLEYKSVDLGKHRHQGETGIDQLVGFTVKREIDKGTVISNRYLEKQYLI 195 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ + + +T + + IAL D +G+VI VKN+ + +V G V+ G Sbjct: 196 NKNEHISLQITTATFSANVKAIALEDGQLGEVINVKNLSSKKVVQGRVIAQG 247 >gi|319790433|ref|YP_004152066.1| flagella basal body P-ring formation protein FlgA [Thermovibrio ammonificans HB-1] gi|317114935|gb|ADU97425.1| flagella basal body P-ring formation protein FlgA [Thermovibrio ammonificans HB-1] Length = 321 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV +V+I G + + +K V + N HS+K+VVG + R +L +I ++L Sbjct: 199 VVAAVLIPKGTKITPTMVKLASVPSRKAY-NAFHSVKEVVGSIARTDILSGKIIRPTMLK 257 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +++ R V+++ G + I G+AL + G +I VKNI TG ++ VV G V Sbjct: 258 PNFLVKRNMPVKVVYNSGPIHIELLGVALDNGVKGHIIRVKNISTGKVLRCRVVGEGLVE 317 >gi|209963566|ref|YP_002296481.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] gi|209957032|gb|ACI97668.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] Length = 215 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 55/121 (45%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A VP+ + GE++ L + V + + D++G RR L+P ++ Sbjct: 91 EAAVPNRRLTPGEIIQPGDLASLPVRADQVSARAVVAPTDLIGKQVRRALVPGRLVQSGS 150 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P V+ R V + G + ++ G AL +GDV+ V N+D+ ++G V G Sbjct: 151 VGEPVVVERSKPVTLEFRSGALLLTARGRALESGGVGDVVRVINLDSNRTITGVVSGPGV 210 Query: 147 V 147 V Sbjct: 211 V 211 >gi|163744350|ref|ZP_02151710.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45] gi|161381168|gb|EDQ05577.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45] Length = 219 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 60/129 (46%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 FA V VP + +++ E L M++ I ++V+G RRVL P Sbjct: 89 FALVTMPVPVPVTRLLPDDIIMEDDLAIMRLPVGRIGAYVITDAEEVIGKQVRRVLTPGR 148 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 I + P VI+RG +V I + G + +S+ G AL DA G I + N+ + V+G Sbjct: 149 PIQTQSIIHPLVINRGERVDIYFSDGLLALSSPGRALDDAHEGQEIRIVNLVSNKTVTGI 208 Query: 141 VVDTGTVRV 149 GTV + Sbjct: 209 ATGEGTVEI 217 >gi|261856134|ref|YP_003263417.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus neapolitanus c2] gi|261836603|gb|ACX96370.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus neapolitanus c2] Length = 255 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query: 53 NSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 N+N + N Y S + +G + R + ++ L VI RG V +I GN+++S Sbjct: 157 NANQQVNAYLTSPDEAIGQIVTRPMQAGQILTQQDLGIAKVIHRGDHVTVIAGTGNVSVS 216 Query: 112 TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 T G+A +DA +G I VKN +G +V G V D TV Sbjct: 217 TEGVAQADAGVGQRIMVKNSRSGQLVEGFVRDANTV 252 >gi|238927616|ref|ZP_04659376.1| SAF domain protein [Selenomonas flueggei ATCC 43531] gi|238884541|gb|EEQ48179.1| SAF domain protein [Selenomonas flueggei ATCC 43531] Length = 254 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 46/84 (54%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 + G V R + VI +L P V+S G+ V ++ G +TI G+AL IG VI Sbjct: 170 LAGRVAGRYIRKGMVIAPPLLAMPRVVSAGSPVELVAESGGITIRAEGVALEAGRIGYVI 229 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 V+N +G ++ G V+D TV+++ Sbjct: 230 RVRNASSGKLMRGRVIDEKTVQII 253 >gi|320354343|ref|YP_004195682.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus propionicus DSM 2032] gi|320122845|gb|ADW18391.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus propionicus DSM 2032] Length = 278 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 5/117 (4%) Query: 35 INAGEVLNESRLKEMQVTNSNIRG-NYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYV 92 +N G+V+N+S + MQ +I G N+ ++ K+ ++G+ R + V+ + + P + Sbjct: 163 LNKGDVINDSNIAVMQ---QDIGGLNHPYTSKEQLIGMQVARTVNAGTVLEQAHIAAPPI 219 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G V+I +G + +ST+G+A +D +G++I VKNI + ++ V G V V Sbjct: 220 VKDGEMVKIFARKGALQLSTSGLAKTDGRLGEIIQVKNIGSNKLIHCRVDGPGMVSV 276 >gi|330447899|ref|ZP_08311547.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492090|dbj|GAA06044.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 312 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 47/88 (53%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S VG T R + +I ++L +P++I++G +V I+ +G ST GIAL + Sbjct: 224 STDQTVGSYTSRRVRQGQLITENLLKKPFLINKGDEVLIVAKRGEFEASTKGIALEHGKL 283 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + I +KN ++ ++SG + G V + Sbjct: 284 NEQIKIKNKNSHKVISGIIFAQGKVETI 311 >gi|311694437|gb|ADP97310.1| flagella basal body P-ring formation protein FlgA [marine bacterium HP15] Length = 222 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVT-NSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 S+ G A+V + + GE + E L + V NS+ RG S K +G+ RR + + Sbjct: 94 SIHGPALVAARPLTRGERITEGLLAKQSVEINSSRRGVITDS-KQAIGMEVRRAVNAGSL 152 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + +L P + RG V I G ++ + G AL+ AS+G+ + V+N+ + + SV Sbjct: 153 VTPDMLSAPNAVERGDHVIITAKTGGFSVRSRGKALASASVGEQVLVENLRSSRTIRASV 212 Query: 142 VDTGTVRV 149 V G V + Sbjct: 213 VAPGHVEI 220 >gi|297182935|gb|ADI19084.1| flagellar basal body p-ring biosynthesis protein [uncultured delta proteobacterium HF0070_15B21] Length = 357 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 62/121 (51%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V+ I A V+ E+ + +++ + Y +D++G V R + P+ VI + + Sbjct: 236 VIAKDTIKADHVIGEADILKVRRNVDRMPSKYVTDAQDILGKVASRAINPNEVIRETTVA 295 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 V+ G ++ I+ N+ ++ G++L ++GD I V+N+ + ++V +V D V+ Sbjct: 296 AQPVVKSGDRLMIVFETQNLRLTAPGMSLQKGALGDRIQVRNLQSKILVYATVRDKNHVQ 355 Query: 149 V 149 V Sbjct: 356 V 356 >gi|119947160|ref|YP_944840.1| flagellar basal body P-ring biosynthesis protein-like protein [Psychromonas ingrahamii 37] gi|119865764|gb|ABM05241.1| Flagellar basal body P-ring biosynthesis protein-like protein [Psychromonas ingrahamii 37] Length = 234 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 14/127 (11%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 GH++ P ++ +E ++ N++ Y ++ + G T+R L +I Sbjct: 122 GHSLQPEDIV----------FREQRIRNND----YYPNVAGLAGKKTKRKLRAGSIIKKK 167 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 + Y + R ++V II Q + ++ST GIAL +GD+I VKN +G +++ +V+ Sbjct: 168 DIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKN 227 Query: 146 TVRVVVK 152 V V K Sbjct: 228 KVSVESK 234 >gi|163750576|ref|ZP_02157814.1| flagellar basal body P-ring biosynthesis protein [Shewanella benthica KT99] gi|161329731|gb|EDQ00720.1| flagellar basal body P-ring biosynthesis protein [Shewanella benthica KT99] Length = 234 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (8%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 + +F S+ V D L+ V+ A + P +I G+++ + V + +RG ++ Sbjct: 100 WQIFISVRV---DILYPVVVARATLGPGDLITKGDIVIKY------VEQTLLRGRQFSNL 150 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 +VVG +R + P+ I + L + +G V II N I T G AL D ++GD Sbjct: 151 DEVVGTRAKRRIAPNQPIFSNNL---CFVCKGDSVSIIARTENFQIKTVGEALQDGNLGD 207 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 I +KN + V+ V+D G V V Sbjct: 208 RIRIKNTYSNKRVNARVIDVGKVEV 232 >gi|254497119|ref|ZP_05109939.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella drancourtii LLAP12] gi|254353657|gb|EET12372.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella drancourtii LLAP12] Length = 246 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 58/113 (51%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE ++ + + ++ ++ Y I ++VG V ++ + + + P V+ +G Sbjct: 133 GEHISGHDMYQAEIDVHKLKNGYFEDIDELVGRVCKQNIAINSPFNPHNIELPKVVRKGE 192 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 KV I+ N+T+S GIA++D ++G+ I VKN+ + ++ V V VV Sbjct: 193 KVAIVTNNNNLTVSMDGIAINDGAMGETIKVKNLVSKRIIEAQVAGKKRVTVV 245 >gi|192358836|ref|YP_001982407.1| putative flagella basal body P-ring formation protein FlgA [Cellvibrio japonicus Ueda107] gi|190685001|gb|ACE82679.1| putative flagella basal body P-ring formation protein FlgA [Cellvibrio japonicus Ueda107] Length = 256 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 59/110 (53%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE ++ S ++ + S +R +Y K+++GL +R + + L P VI RG Sbjct: 144 GEQISASDIQWETINISLLRQSYLLETKEIIGLEVKRNIGLGSPFLSASLDAPKVIYRGE 203 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V + + G + +S +G AL+D +G I V+N + +V+G+VV +G V Sbjct: 204 TVDLESSVGGINVSASGTALADGRLGQKIRVRNNQSDRVVTGTVVASGKV 253 >gi|91204382|emb|CAJ70882.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 339 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 63 SIKDVVGLVTRRVLL---PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 +I V L+ +RVL P + +++ P VI +G V+I++ GN++I T G+A D Sbjct: 248 TIDSVEPLLGKRVLYTIPPGKPLTQNMVDDPAVIKKGELVKILVKIGNLSILTKGVAKED 307 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G I V N+DT + G V D TV++++ Sbjct: 308 GYKGRAIKVMNLDTKKELYGEVQDDCTVKIIL 339 >gi|83312593|ref|YP_422857.1| flagellar basal body P-ring biosynthesis protein FlgA [Magnetospirillum magneticum AMB-1] gi|82947434|dbj|BAE52298.1| Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magneticum AMB-1] Length = 324 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 + VRF + S+Y + + A +G G+V+ E ++ + V +R + Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMGR----------GDVIREDDIQWVDVREEVVRRDII 225 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + + +VG R L + + + +P V+++ + V I+L MT++ G A+ D S Sbjct: 226 SNARMLVGQEPRYQLRAGVPVRTNEVQKPVVVAKNSSVTIMLRSKFMTLTAQGRAIEDGS 285 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +GDVI V N+ + V + G V V+ Sbjct: 286 VGDVIRVTNVQSKQTVDAKIEGPGQVSVM 314 >gi|288940403|ref|YP_003442643.1| flagella basal body P-ring formation protein FlgA [Allochromatium vinosum DSM 180] gi|288895775|gb|ADC61611.1| flagella basal body P-ring formation protein FlgA [Allochromatium vinosum DSM 180] Length = 245 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 50/98 (51%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S + Y DVVGL +RR L+P V+ + + + ++ RG +V + + + + Sbjct: 148 STLTNGYFTEASDVVGLASRRRLMPGQVLTSAHVTQRRIVERGQEVTLFSARPGLVVRMK 207 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G AL + G+ I V+N + +V G V +G VRV + Sbjct: 208 GTALENGVEGERIRVRNTSSKRIVEGYVEPSGAVRVAL 245 >gi|119503639|ref|ZP_01625722.1| flagellar protein [marine gamma proteobacterium HTCC2080] gi|119460701|gb|EAW41793.1| flagellar protein [marine gamma proteobacterium HTCC2080] Length = 234 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 10 FSLYVLSLDSLFASVIGHAVVP--SVVINAGEVL--NESRLKEMQVTNSNIRGNYAHSIK 65 ++LYV V + VVP + + G+++ N+ LK+ ++T N G I Sbjct: 98 WTLYV------RGEVAANQVVPVLTAALRRGDLIGNNDIILKKRRITQEN--GGIVTEID 149 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 ++G+ RR L P + + + L P ++ RG V I+ + +S G AL+ + GD Sbjct: 150 GLIGMEARRNLDPGNPLRFNDLVAPILVERGQTVNIVSGGSGLRVSMQGKALAKGAAGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTV 147 + V N+ +G V G + G+V Sbjct: 210 VLVANLTSGTRVEGIIATDGSV 231 >gi|88799014|ref|ZP_01114595.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp. MED297] gi|88778241|gb|EAR09435.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp. MED297] Length = 268 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%) Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 ++R Y + G RR + VI ++ P +I+RG V +I +G +T++T G Sbjct: 169 DLRQGYFLEAAKIEGYALRRTVKAGQVITPYMVEAPSLIARGDWVTVISGRGALTVTTTG 228 Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 AL D ++G+ I V+N+ + V V+ G V Sbjct: 229 EALKDGALGEQIPVRNLSSDETVRAWVIRKGVV 261 >gi|160896083|ref|YP_001561665.1| SAF domain-containing protein [Delftia acidovorans SPH-1] gi|160361667|gb|ABX33280.1| SAF domain [Delftia acidovorans SPH-1] Length = 254 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 YA+ +D VGLV R L + ++L P + + GA+VR+++ G +++++G A+S Sbjct: 166 YANQ-QDWVGLVASRPLAAGQALRQNMLRTPALFAVGAEVRVLVNGGGFSVTSSGKAMSA 224 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 A G + V+ +D G ++SG V G V Sbjct: 225 AGEGQTVRVR-MDNGRLISGVVNPEGVV 251 >gi|146281765|ref|YP_001171918.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas stutzeri A1501] gi|145569970|gb|ABP79076.1| flagella basal body P-ring formation protein FlgA [Pseudomonas stutzeri A1501] Length = 250 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%) Query: 32 SVVINAGEVLNESRLKEMQVTN-----SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V++ +L +SRL E V+ SN+ Y + +V+G R + PD VI + Sbjct: 126 QVIVANRSLLRDSRLSEADVSLAERDVSNLTQGYLTRMDEVLGNKLTRPVQPDQVIAPNQ 185 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + V+ +G +V I G + + G A++D + G I VKN +G +V V+ G Sbjct: 186 MELAEVVRKGDQVVITARSGAINVRMPGEAMADGAPGKQIPVKNQRSGRVVKARVIGPGH 245 Query: 147 VRVVV 151 V V + Sbjct: 246 VEVAM 250 >gi|51246534|ref|YP_066418.1| flagellar protein (FlgA) [Desulfotalea psychrophila LSv54] gi|50877571|emb|CAG37411.1| related to flagellar protein (FlgA) [Desulfotalea psychrophila LSv54] Length = 315 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 47/87 (54%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S + G RR + D VI S L V+ RG +V+I L GN+ + T G+A +D + Sbjct: 227 SARQAEGQRLRRRIRKDDVIRASSLEHVPVVHRGDRVKIHLLSGNLQVVTLGVARADGGV 286 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 D I V+NI++ ++ VV G V+V Sbjct: 287 HDFIRVQNINSKKIIYCQVVAPGIVKV 313 >gi|153950687|ref|YP_001399630.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 31758] gi|152962182|gb|ABS49643.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 31758] Length = 272 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 165 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 221 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 222 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 267 >gi|209964691|ref|YP_002297606.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodospirillum centenum SW] gi|209958157|gb|ACI98793.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] Length = 326 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 57/108 (52%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + +GEV+ + + ++V + + ++++VGL RR L + + + P V++ Sbjct: 196 LGSGEVIGDQDIAWIKVPRERVSADVVTDLENLVGLAARRTLAANQPVRGRDVRTPVVVA 255 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 RGA V ++L MT++ G AL+D +G+ + + N + +V +V Sbjct: 256 RGALVTLLLQTPAMTLTAQGKALADGGLGESVRIVNTTSNRVVDATVA 303 >gi|170022967|ref|YP_001719472.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis YPIII] gi|186896775|ref|YP_001873887.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis PB1/+] gi|51590923|emb|CAH22579.1| Putative flagella basal body P-ring formation protein [Yersinia pseudotuberculosis IP 32953] gi|169749501|gb|ACA67019.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis YPIII] gi|186699801|gb|ACC90430.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis PB1/+] Length = 272 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 165 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 221 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 222 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 267 >gi|150260253|ref|ZP_01916981.1| lateral flagellar P-ring addition protein [Yersinia pestis CA88-4125] gi|162419782|ref|YP_001604851.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Angola] gi|165925092|ref|ZP_02220924.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165939099|ref|ZP_02227651.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|166008979|ref|ZP_02229877.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166211927|ref|ZP_02237962.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|167418801|ref|ZP_02310554.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425137|ref|ZP_02316890.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466345|ref|ZP_02331049.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis FV-1] gi|229837404|ref|ZP_04457567.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Pestoides A] gi|229840617|ref|ZP_04460776.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842832|ref|ZP_04462984.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. India 195] gi|229900941|ref|ZP_04516065.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Nepal516] gi|294502784|ref|YP_003566846.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Z176003] gi|149289661|gb|EDM39738.1| lateral flagellar P-ring addition protein [Yersinia pestis CA88-4125] gi|162352597|gb|ABX86545.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Angola] gi|165913055|gb|EDR31680.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|165923292|gb|EDR40443.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992318|gb|EDR44619.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206673|gb|EDR51153.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|166962795|gb|EDR58816.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055900|gb|EDR65681.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682280|gb|EEO78372.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Nepal516] gi|229690099|gb|EEO82156.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. India 195] gi|229696983|gb|EEO87030.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705527|gb|EEO91537.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Pestoides A] gi|262360816|gb|ACY57537.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis D106004] gi|262364761|gb|ACY61318.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis D182038] gi|294353243|gb|ADE63584.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Z176003] gi|320016715|gb|ADW00287.1| Flagellar basal-body P-ring formation proteinflgA [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 282 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 175 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 231 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 232 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 277 >gi|108809059|ref|YP_652975.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Antiqua] gi|108810744|ref|YP_646511.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Nepal516] gi|167398491|ref|ZP_02304015.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|21960413|gb|AAM87006.1|AE013948_14 putative flagellar protein [Yersinia pestis KIM 10] gi|45437658|gb|AAS63208.1| putative flagellar protein [Yersinia pestis biovar Microtus str. 91001] gi|108774392|gb|ABG16911.1| flagella basal body P-ring formation protein [Yersinia pestis Nepal516] gi|108780972|gb|ABG15030.1| putative flagella basal body P-ring formation protein [Yersinia pestis Antiqua] gi|167050995|gb|EDR62403.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 305 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 198 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 254 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 255 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 300 >gi|149374965|ref|ZP_01892738.1| flagellar basal body P-ring biosynthesis protein [Marinobacter algicola DG893] gi|149360854|gb|EDM49305.1| flagellar basal body P-ring biosynthesis protein [Marinobacter algicola DG893] Length = 234 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 12/133 (9%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR------VL 76 ++ G A+V + + GE L ++ ++ V ++IR +I+ +VG+ RR V Sbjct: 106 TITGDAMVAARPLGRGERLTKAAIRSDNVVVNSIRRGAITNIEQLVGMEMRRGVNTGTVF 165 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 PD V+ P I RG V I GN ++++ G AL+ SIG+ + V+N+ + Sbjct: 166 TPDLVLA------PAAIERGDHVIISARSGNFSVNSRGKALASGSIGEQVLVENLSSSRT 219 Query: 137 VSGSVVDTGTVRV 149 V V G V + Sbjct: 220 VRARVTAPGHVEI 232 >gi|224370759|ref|YP_002604923.1| FlgA [Desulfobacterium autotrophicum HRM2] gi|223693476|gb|ACN16759.1| FlgA [Desulfobacterium autotrophicum HRM2] Length = 310 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 58/115 (50%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ GE+L L ++ S I NY + +VG+ ++ L + +++ +I+ Sbjct: 194 LSRGEILAPKDLCLKRINVSKIPDNYLTRLDSLVGMRLKQSLASNGFFRENMVEDSPLIN 253 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 RG V ++ +GNM I G+A + +GD I V N+ T +VSG + TV V Sbjct: 254 RGDNVVLVARKGNMRIVATGVADQEGRLGDQIQVNNLTTNRVVSGRISGPKTVDV 308 >gi|157376222|ref|YP_001474822.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sediminis HAW-EB3] gi|157318596|gb|ABV37694.1| SAF domain protein [Shewanella sediminis HAW-EB3] Length = 259 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 13/145 (8%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 + +F S+ V D L+ V+ + P +I++G+V + V +++RG I Sbjct: 125 WQIFLSVRV---DVLYPVVVSRETLGPDDLISSGDVAIQ------YVEQTSLRGQQFDKI 175 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 +DVVG +R + P+ I ++ L + +G V I N I T G AL D ++GD Sbjct: 176 EDVVGTRVKRRIPPNQPIFINNL---CFVCKGDTVSIFARSKNFEIKTVGEALRDGNLGD 232 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 I +KN + + V G V V Sbjct: 233 RIRIKNSYSNKSLDAKVTGVGEVEV 257 >gi|326794324|ref|YP_004312144.1| flagella basal body P-ring formation protein FlgA [Marinomonas mediterranea MMB-1] gi|326545088|gb|ADZ90308.1| flagella basal body P-ring formation protein FlgA [Marinomonas mediterranea MMB-1] Length = 231 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 56/116 (48%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 SV I+ G V+ + +V + IRG+ + GLV R + + I + +P Sbjct: 112 SVPISRGSVITPTNTTTGKVDITTIRGHLYTAKTPPYGLVASRNIRINTFITDKITKQPI 171 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ +GA+V I G +++ G AL D + G I VKN +G +V G VV V Sbjct: 172 LVKKGARVLITARSGRISVKMNGTALEDGAKGQQIRVKNASSGRIVYGKVVSDSEV 227 >gi|145597813|ref|YP_001161889.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Pestoides F] gi|145209509|gb|ABP38916.1| flagella basal body P-ring formation protein [Yersinia pestis Pestoides F] Length = 305 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 198 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 254 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 255 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 300 >gi|254491860|ref|ZP_05105039.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxidans DMS010] gi|224463338|gb|EEF79608.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxydans DMS010] Length = 232 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%) Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 +R Y S V+G + L +P L + VI RG ++ ++ + G+M + G Sbjct: 136 ELRQGYIQSTDKVIGQQLKYPLSMGMALPPRGLKQEKVIRRGEQIILVASAGSMEVRMNG 195 Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 A+ DAS+G+ + VKN + +V G V G V+V + Sbjct: 196 TAMGDASVGEKVKVKNSSSKRVVEGIVHAPGVVKVTM 232 >gi|288574698|ref|ZP_06393055.1| flagella basal body P-ring formation protein FlgA [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570439|gb|EFC91996.1| flagella basal body P-ring formation protein FlgA [Dethiosulfovibrio peptidovorans DSM 11002] Length = 304 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 Y KD+VG+ R + + + P +I G +R++ G++ +ST+G A+ Sbjct: 212 KYYDDPKDLVGMTVERDMAKGDPFTVRITEEPELIRTGDLIRLLYRSGSLLVSTSGRAMD 271 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++GD I V+N T +V G V GTV V Sbjct: 272 RGALGDRIKVRNDRTRKIVFGIVTGPGTVEV 302 >gi|304438316|ref|ZP_07398257.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368682|gb|EFM22366.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 254 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 47/84 (55%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 + G V R + VI ++L P V++ G+ V ++ G +TI G+AL IG VI Sbjct: 170 LAGRVAGRYIRKGTVITPTLLAMPRVLTAGSPVTLVAENGGITIRAEGVALEAGRIGYVI 229 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 V+N +G ++ G VVD TV+++ Sbjct: 230 RVRNARSGKIMRGRVVDEKTVQII 253 >gi|161484755|ref|NP_670755.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis KIM 10] gi|161511337|ref|NP_994331.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|161760560|ref|YP_071832.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 32953] gi|218927908|ref|YP_002345783.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis CO92] gi|270487677|ref|ZP_06204751.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|115346519|emb|CAL19395.1| putative flagella basal body P-ring formation protein [Yersinia pestis CO92] gi|270336181|gb|EFA46958.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] Length = 237 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 LK+ +T ++G Y +++GL + RR+ VIP S L +P +++R V ++ Sbjct: 130 LKKKNITG--VQGGYITDPDEILGLTIKRRIRQLQAVIP-SQLEQPVLVTRNQHVLMLAA 186 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Q + GIA + G++I VKN+ +G +V+ +V +G VR++ Sbjct: 187 QDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML 232 >gi|317050616|ref|YP_004111732.1| flagella basal body P-ring formation protein FlgA [Desulfurispirillum indicum S5] gi|316945700|gb|ADU65176.1| flagella basal body P-ring formation protein FlgA [Desulfurispirillum indicum S5] Length = 249 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Query: 23 SVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLP 78 +VI H A VP I GEVL E + + R D +V+ R L Sbjct: 117 AVINHMVEAYVPVRNITRGEVLREGDFRRQLFPATQARNAMDIGETDFASHIVSTRNLQE 176 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 ++ + L R Y + RG V +I +T+S A +A A +GDV+ +KN +G +++ Sbjct: 177 GQIVRTTDLRREYAVQRGDIVEVIYRHDRLTLSMAAVATERAYLGDVVRLKNPSSGRILT 236 Query: 139 GSVVDTGTVRVV 150 ++ ++ Sbjct: 237 ARLLQGKKAEII 248 >gi|238762363|ref|ZP_04623334.1| Flagella basal body P-ring formation protein FlgA [Yersinia kristensenii ATCC 33638] gi|238699348|gb|EEP92094.1| Flagella basal body P-ring formation protein FlgA [Yersinia kristensenii ATCC 33638] Length = 249 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Query: 48 EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 E++ N S +G Y + ++VGL +R + V+ S L +P +++RG +V +I Q Sbjct: 141 ELKKKNISTAQGGYITNPDEIVGLTVKRRIRGLQVVTPSQLEQPVLVTRGQQVLMIAEQE 200 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + G AL + G++I VKN+ + V+ V D VR++ Sbjct: 201 GIEARMLGEALKNGRKGELIKVKNLSSKRTVTAIVDDIARVRML 244 >gi|170725949|ref|YP_001759975.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella woodyi ATCC 51908] gi|169811296|gb|ACA85880.1| flagella basal body P-ring formation protein FlgA [Shewanella woodyi ATCC 51908] Length = 235 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V D L+ V+ + G++L+ + V +N+RG IK Sbjct: 101 WQIFLSVRV---DILYPVVVARET-----LGPGDLLSNDDVIIEYVDRTNLRGQQFDDIK 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 VVG +R + P+ I S L + +G V I N+ I T G AL D ++GD Sbjct: 153 QVVGTRVKRRIPPNQPIFSSNL---CFVCKGDTVSIYARSANVVIKTVGEALRDGNLGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149 I +KN + + +V G V V Sbjct: 210 IRIKNTHSNKSLHATVTGVGEVEV 233 >gi|288958676|ref|YP_003449017.1| FlgA protein [Azospirillum sp. B510] gi|288910984|dbj|BAI72473.1| FlgA protein [Azospirillum sp. B510] Length = 259 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ ++P VI G++ + ++ Q T+ + A + ++G+ +R + + + Sbjct: 131 PVLSRRIIPGDVIGPGDI-DWQDVRADQTTS-----DTAATDAQLIGMTPKRGVSTNQPV 184 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 L L P +I +GA V I LT +MT++T G AL D G+VI V N + +V +V Sbjct: 185 RLRDLQSPRMIDKGAMVTITLTTPSMTLTTQGKALQDGGKGEVIRVVNTQSNRIVEATV 243 >gi|157961165|ref|YP_001501199.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella pealeana ATCC 700345] gi|157846165|gb|ABV86664.1| SAF domain protein [Shewanella pealeana ATCC 700345] Length = 257 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + G++L ++ + SN+RG I VVG +R + P I + L Sbjct: 138 VVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEISQVVGARLKRRVAPGQPIFANQL- 196 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 ++ +G V I N I T G AL D ++GD I +KN + + V G V Sbjct: 197 --CIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSHKKLDARVTGVGQVE 254 Query: 149 V 149 V Sbjct: 255 V 255 >gi|90423016|ref|YP_531386.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisB18] gi|90105030|gb|ABD87067.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18] Length = 370 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 7/136 (5%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 +++++ A+V+ V + V+ + +V+ E R K + I G+ A S D VG+ RR Sbjct: 212 AIETVDAAVLARGVERNEVLKSSDVVVERRPK------AEIGGDAA-SRDDAVGMQARRQ 264 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L + L L +P ++SR V +I + ++ G AL + GDV+ V N+ + Sbjct: 265 LRAGQALRLVDLSKPDLVSRDQAVTLIYQSTGLYLTVRGKALESGTEGDVVNVINLQSKR 324 Query: 136 MVSGSVVDTGTVRVVV 151 V+G+V+ G V V V Sbjct: 325 TVAGTVIGRGQVAVSV 340 >gi|89072320|ref|ZP_01158899.1| LfgA [Photobacterium sp. SKA34] gi|89051852|gb|EAR57304.1| LfgA [Photobacterium sp. SKA34] Length = 270 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 46/88 (52%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 ++ V+GL T R + +I ++L +P++I++G +V I+ +G ST G+AL + Sbjct: 182 NVDQVIGLHTNRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGVALDHGKM 241 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + I V+N ++ V G V + Sbjct: 242 KEQIKVENTANQKVIHARVFAQGKVETI 269 >gi|332162905|ref|YP_004299482.1| flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667135|gb|ADZ43779.1| Flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863355|emb|CBX73478.1| hypothetical protein YEW_ES20730 [Yersinia enterocolitica W22703] Length = 234 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 48 EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 E++ N S +G Y ++VG +R + V+ S L +P +++RG +V +I Q Sbjct: 126 ELKKKNISTAQGGYITDPDEIVGFTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQD 185 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + G AL + G++I VKNI + V+ V D VR++ Sbjct: 186 GIEARMFGEALKNGRKGELIKVKNISSKRTVTAMVDDVAKVRML 229 >gi|83647408|ref|YP_435843.1| flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] gi|83635451|gb|ABC31418.1| Flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] Length = 236 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 50/94 (53%) Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 ++R + + +DVVG++TRR + ++L P +I++G V I + ++ G Sbjct: 140 DLRYGFYTNAEDVVGMITRRPVNAGSAPYPNMLEAPKLINKGDMVVIEAATHHFSVKMPG 199 Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +A++D G I VKN + MV V+ +G VR Sbjct: 200 VAMADGRRGQQIMVKNSSSNRMVRAEVIGSGHVR 233 >gi|318604248|emb|CBY25746.1| flagellar basal-body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica Y11] Length = 234 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 48 EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 E++ N S +G Y ++VG +R + V+ S L +P +++RG +V +I Q Sbjct: 126 ELKKKNISTAQGGYITDPDEIVGFTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQD 185 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + G AL + G++I VKNI + V+ V D VR++ Sbjct: 186 GIEARMFGEALKNGRKGELIKVKNISSKRTVTAMVDDVAKVRML 229 >gi|330972404|gb|EGH72470.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 222 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 50/98 (51%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D VI L +P +I +G +V II G++ + Sbjct: 125 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 184 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ SV G V V + Sbjct: 185 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 222 >gi|238752870|ref|ZP_04614335.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei ATCC 43380] gi|238708909|gb|EEQ01162.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei ATCC 43380] Length = 215 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Query: 48 EMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 E++ N S +G+Y + ++VG +R + ++ + L +P +++RG V +I Q Sbjct: 107 ELKKKNISAAQGSYITNPDEIVGFTVKRRIRNLQIVTSAQLEQPVLVTRGQHVVMIAEQD 166 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + G AL + G++I VKN+ + +S V D G VR++ Sbjct: 167 GIEARMLGEALKNGRKGELIKVKNLSSKRTISAIVEDIGKVRML 210 >gi|110677664|ref|YP_680671.1| flagellar basal body P-ring biosynthesis protein FlgA [Roseobacter denitrificans OCh 114] gi|109453780|gb|ABG29985.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter denitrificans OCh 114] Length = 140 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R L L L L +LFA V VVP+ I A + S + + N N A++ Sbjct: 2 IRLALISWLMCLPL-ALFAEV----VVPAKTIRANATITASDITLKPIQNEN-----AYT 51 Query: 64 I-KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + DVVG R L I + P ++SR V + + I T G AL + Sbjct: 52 LMADVVGQEARTTLYAGRPILFDDIGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGV 111 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 GD + + N+D+ + G V G+VRV Sbjct: 112 GDRVRIMNLDSRATLFGQVQADGSVRV 138 >gi|114777906|ref|ZP_01452820.1| flagellar protein [Mariprofundus ferrooxydans PV-1] gi|114551693|gb|EAU54245.1| flagellar protein [Mariprofundus ferrooxydans PV-1] Length = 234 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%) Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 G + + +VG+ T R L VI S + +P ++ RG V I+L G + I G A+ Sbjct: 136 GAWWQNSSTLVGMRTTRPLAAGDVILSSYVKQPPLVKRGDLVSILLDVGGLHIRAEGKAM 195 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 A G+ I V+N+ + M+ V TG VRV Sbjct: 196 RSAGKGESIPVRNMRSHEMIQAVVEQTGLVRV 227 >gi|66046716|ref|YP_236557.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae B728a] gi|63257423|gb|AAY38519.1| Flageller protein FlgA [Pseudomonas syringae pv. syringae B728a] Length = 252 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 50/98 (51%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D VI L +P +I +G +V II G++ + Sbjct: 155 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 214 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ SV G V V + Sbjct: 215 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 252 >gi|260365768|ref|ZP_05778264.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus K5030] gi|260880690|ref|ZP_05893045.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AN-5034] gi|260897704|ref|ZP_05906200.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus Peru-466] gi|308086270|gb|EFO35965.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus Peru-466] gi|308092470|gb|EFO42165.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AN-5034] gi|308115034|gb|EFO52574.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus K5030] Length = 265 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + EV+ + LK ++ + ++ + K +GL T R L V+ + L Sbjct: 144 VVAATTVGRSEVVTANHLK-LETRTISRSDDFYTAPKHAIGLETTRRLRAGQVVDPTSLS 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 203 APALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 251 >gi|28900118|ref|NP_799773.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus RIMD 2210633] gi|28808401|dbj|BAC61606.1| LfgA [Vibrio parahaemolyticus RIMD 2210633] Length = 235 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + EV+ + LK ++ + ++ + K +GL T R L V+ + L Sbjct: 114 VVAATTVGRSEVVTANHLK-LETRTISRSDDFYTAPKHAIGLETTRRLRAGQVVDPTSLS 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G Sbjct: 173 APALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 218 >gi|152990360|ref|YP_001356082.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2] gi|151422221|dbj|BAF69725.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2] Length = 238 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 NY +++++G V R + + I ++ Y + + VRII +G + I G+AL Sbjct: 147 NYP-DLQEIIGSVARVNIYKNRKITRYMIEPNYAVKKRQNVRIIYAKGPIRIELLGLALQ 205 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + GD+I VKNI T ++ V+ G V+ Sbjct: 206 NGKRGDIIKVKNISTNKVLECKVLSDGVVQ 235 >gi|289679038|ref|ZP_06499928.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae FF5] gi|302185595|ref|ZP_07262268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae 642] gi|330899392|gb|EGH30811.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943194|gb|EGH45603.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. pisi str. 1704B] gi|330953710|gb|EGH53970.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae Cit 7] Length = 222 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D VI L +P ++ +G +V II G++ + Sbjct: 125 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMVHKGDQVVIIARSGSLAVRMP 184 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ SV G V V + Sbjct: 185 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 222 >gi|270262405|ref|ZP_06190676.1| SAF domain-containing protein [Serratia odorifera 4Rx13] gi|270043089|gb|EFA16182.1| SAF domain-containing protein [Serratia odorifera 4Rx13] Length = 217 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VIG+ +V + I+AG L + +K + + +G V+ R + P + Sbjct: 90 QVIGNYLVSARNISAGSRLTAADVKLKSGRLDTLAPRTLTNADKAIGAVSLRNISPGQPL 149 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G V++ IS AG A+++A+ D + V+ + +G +VSG Sbjct: 150 TFAMLRRAWVIKAGQPVQVTAQGTGFNISGAGKAMNNAAAEDSVRVR-MASGQIVSGIAD 208 Query: 143 DTGTVRVVV 151 D GT+R+ + Sbjct: 209 DDGTIRIAL 217 >gi|1272364|gb|AAA97472.1| LfgA [Vibrio parahaemolyticus] Length = 235 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + EV+ ++LK ++ + ++ K +GL T R L V+ + L Sbjct: 114 VVAATTVGRSEVVTANQLK-LETRTISRSDDFYTDPKHAIGLETTRRLRAGQVVDPTNLS 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G Sbjct: 173 APALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 218 >gi|167623355|ref|YP_001673649.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella halifaxensis HAW-EB4] gi|167353377|gb|ABZ75990.1| SAF domain protein [Shewanella halifaxensis HAW-EB4] Length = 257 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + G++L+ ++ + + +RG+ I +VVG +R + P I + L Sbjct: 138 VVAKSTMGPGDLLSRGDIELEYIEQTTLRGHQFEEISEVVGARLKRRVAPGQPIFANQL- 196 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 ++ +G V I N I T G AL DA++GD + +KN + + V G V Sbjct: 197 --CIVCKGDSVSIYARSENFEIKTVGEALHDANVGDKVRIKNSHSHKNLDARVTGVGQVE 254 Query: 149 V 149 V Sbjct: 255 V 255 >gi|241763673|ref|ZP_04761723.1| flagella basal body P-ring formation protein FlgA [Acidovorax delafieldii 2AN] gi|241367148|gb|EER61514.1| flagella basal body P-ring formation protein FlgA [Acidovorax delafieldii 2AN] Length = 200 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%) Query: 19 SLFASVIGHAVVPSVVIN----AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 S+F V A P+ V+N +G L + E +V + + VG V R Sbjct: 65 SVFLPVTIKAFGPAWVLNNNVASGVALTAADATEAEVDWAAEAAPVLANPDQWVGQVASR 124 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L+ + S++ P V GA+VR++ ++++G ALS+ + G I ++ +D G Sbjct: 125 QLMAGQAVRQSMVRAPAVFRAGAQVRVVTQGPGYMVTSSGQALSNGATGQTIRIR-MDNG 183 Query: 135 VMVSGSVVDTGTVRVVV 151 +SG V + GTV V + Sbjct: 184 RTISGIVNEDGTVAVTL 200 >gi|225849136|ref|YP_002729300.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643496|gb|ACN98546.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense Az-Fu1] Length = 167 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 31/58 (53%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 VI + KV I+ G + I G+AL GD I VKNI TG + G VVD TV V Sbjct: 107 VIQKNQKVNILYINGPIKIQLLGVALESGKEGDYIKVKNISTGKEIVGKVVDNQTVLV 164 >gi|170682474|ref|YP_001742369.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli SMS-3-5] gi|170520192|gb|ACB18370.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli SMS-3-5] Length = 245 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R + + D +GL ++ L P I L P ++ R V I Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMI 193 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N+ + ++S V ++G V V Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNVSSQRVISARVAESGVVTTV 242 >gi|260431747|ref|ZP_05785718.1| flagella basal body P-ring formation protein FlgA [Silicibacter lacuscaerulensis ITI-1157] gi|260415575|gb|EEX08834.1| flagella basal body P-ring formation protein FlgA [Silicibacter lacuscaerulensis ITI-1157] Length = 138 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 12/141 (8%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VV 68 L V L LFA + VVP+ I A EV+ LK G+ A +++D +V Sbjct: 6 LMVCLLCPLFAQ--ANVVVPTRTIRAKEVITAEDLKIQP-------GDVAGAVEDPDLLV 56 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G R L P I S + P V+ R V ++ + +TI G AL ++G+ I Sbjct: 57 GQEARIALYPGRPIRASDVRAPAVVDRNDLVTLVFVKNGLTIEVEGRALGRGAVGERIRA 116 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 N+ + V+G V G + V Sbjct: 117 MNLSSRSAVTGKVGPDGQIEV 137 >gi|90577340|ref|ZP_01233151.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] gi|90440426|gb|EAS65606.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] Length = 247 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + V+GL R + +I ++L +P++I++G +V I+ +G ST GIAL + + Sbjct: 161 EQVIGLHAIRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGIALEHGKMHE 220 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVV 150 I V+N T ++ V G V V Sbjct: 221 QIRVENTATQKVIHARVFAQGKVETV 246 >gi|163733144|ref|ZP_02140588.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter litoralis Och 149] gi|161393679|gb|EDQ18004.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter litoralis Och 149] Length = 140 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 11/147 (7%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +RF L S V S +FA V VVP+ I A ++ S + + N N A+S Sbjct: 2 IRFALI-SWLVCSPFFVFAEV----VVPAKTIRANATISASDITLKPIKNEN-----AYS 51 Query: 64 I-KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + DVVG R L I + P ++SR V + + I T G AL + Sbjct: 52 LMADVVGQEARTTLYAGRPILFDDVGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGV 111 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 GD + + N+D+ + G V G++RV Sbjct: 112 GDRVRIMNLDSRATLFGQVQADGSIRV 138 >gi|258625238|ref|ZP_05720150.1| Flagellar protein flgA precursor [Vibrio mimicus VM603] gi|258582485|gb|EEW07322.1| Flagellar protein flgA precursor [Vibrio mimicus VM603] Length = 265 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + E + ES LK + T + Y ++ + V+GL T R + ++ ++L Sbjct: 144 VVAKTTLRRDETIQESNLKIEKRTLTRQEDFYTNT-QQVIGLETTRRIRSGQIVNPNILR 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ +G +V II ++ T +T GIAL G I V+N +G ++ V D V Sbjct: 203 SSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVIRAVVTDLNQV 261 >gi|206889894|ref|YP_002249847.1| flagella basal body P-ring formation protein FlgA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741832|gb|ACI20889.1| flagella basal body P-ring formation protein FlgA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 231 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 59/127 (46%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ + + + GEV+ E ++ E++ S + ++G V +R L +I Sbjct: 103 EVLTRVYITQIPLKRGEVITEEKIMEIKQPLSRLPVGAITDKNLLIGKVVKRSLTRGLII 162 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L+ + +G+KV +I+ G + I T G+ SDA +G V+ TG + G +V Sbjct: 163 KEDYLYSGMPVKKGSKVDVIINTGQVMIMTEGVLKSDAVVGGNARVQCFQTGKEIVGKLV 222 Query: 143 DTGTVRV 149 VRV Sbjct: 223 GKDKVRV 229 >gi|297183132|gb|ADI19275.1| flagellar basal body p-ring biosynthesis protein [uncultured delta proteobacterium HF0200_39L23] Length = 227 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 49/90 (54%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y +D++G + R + P+ VI + + VI G ++ I+ N+ ++ GI+L Sbjct: 137 YVTDEEDILGKIASRAINPNEVIQETNVSAVPVIKSGDRLMIVFETQNLRLTAPGISLQK 196 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++GD I V+N+ + ++V ++ D V+V Sbjct: 197 GALGDRIRVRNLQSKILVYATIEDRNHVQV 226 >gi|118588712|ref|ZP_01546120.1| Flageller protein FlgA [Stappia aggregata IAM 12614] gi|118438698|gb|EAV45331.1| Flageller protein FlgA [Stappia aggregata IAM 12614] Length = 331 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 55/115 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G+++ E L ++ + + ++D+VG R L + + + + RP +I Sbjct: 202 VRRGDIVREEDLNIIREARTKVPAGALTEVEDIVGKQARTTLRANAPLSRNDVQRPILIE 261 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 RG K+ + M +++ A+ + GDVI V N+ + +V ++ G VRV Sbjct: 262 RGEKITVTYVMPGMKLTSRAQAMDSGAKGDVIDVMNLQSRRIVPATITSRGQVRV 316 >gi|330875965|gb|EGH10114.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 248 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D VI L +P +I +G +V II Sbjct: 145 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARS 202 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 203 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 248 >gi|237799198|ref|ZP_04587659.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806217|ref|ZP_04592921.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022053|gb|EGI02110.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027330|gb|EGI07385.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 252 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 49/98 (50%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D V+ L +P +I +G +V II G + + Sbjct: 155 SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARTGTLAVRMP 214 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ SV G V V + Sbjct: 215 GEAMSDGGFNEQIRVKNLNSQRVIKASVTGPGQVEVAM 252 >gi|28869130|ref|NP_791749.1| flagellar protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967591|ref|ZP_03395739.1| flagellar protein [Pseudomonas syringae pv. tomato T1] gi|301385704|ref|ZP_07234122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato Max13] gi|302062727|ref|ZP_07254268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato K40] gi|302134843|ref|ZP_07260833.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852370|gb|AAO55444.1| flagellar protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927892|gb|EEB61439.1| flagellar protein [Pseudomonas syringae pv. tomato T1] gi|331019680|gb|EGH99736.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 248 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D VI L +P +I +G +V II G++ + Sbjct: 151 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMP 210 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ +V G V V + Sbjct: 211 GEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 248 >gi|300113144|ref|YP_003759719.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus watsonii C-113] gi|299539081|gb|ADJ27398.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus watsonii C-113] Length = 235 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 65/131 (49%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S+ +V G +V + I++G LN + ++ + S +R Y + VG +R + Sbjct: 103 SVKMAVYGKVLVATHSISSGFPLNLADMRLERRDLSELRQGYLNEPAQAVGKRLKRPVGL 162 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 +I +L P +I RG +V ++ + ++ G AL DA G+ I V+N + +V Sbjct: 163 GAIITPGMLETPKLIRRGQQVILMAKVPGLRVNMKGQALEDAGAGEHIRVRNTSSQRIVE 222 Query: 139 GSVVDTGTVRV 149 G+V G V+V Sbjct: 223 GTVTAAGLVQV 233 >gi|149912835|ref|ZP_01901369.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. AzwK-3b] gi|149813241|gb|EDM73067.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. AzwK-3b] Length = 139 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%) Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 A+ + V+G R L I L+ + P V+ R V +I + I+T G AL A Sbjct: 49 ANRLDQVIGQEARVALYAGRPIRLTDIGEPAVVDRNQMVSLIFESHGLRIATEGRALDRA 108 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G++I V N+ + VSG V+ G +RV+ Sbjct: 109 GVGEMIRVMNMSSRATVSGEVLPDGRIRVM 138 >gi|71735190|ref|YP_275572.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555743|gb|AAZ34954.1| flagellar basal-body P-ring formation protein FlgA, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 252 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 149 LRERDV--SSLGQGFLASLDQAVGQTVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 206 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 207 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 252 >gi|121997325|ref|YP_001002112.1| SAF domain-containing protein [Halorhodospira halophila SL1] gi|121588730|gb|ABM61310.1| SAF domain [Halorhodospira halophila SL1] Length = 262 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 5/97 (5%) Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN---MTIST 112 IRG + ++G RR L I + + P ++ R R+ +T GN + IS+ Sbjct: 166 IRGEFYRDPAPLIGQAVRRSLREGAAITGNHVQPPRLVER--NDRVTITAGNGGAIQISS 223 Query: 113 AGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G AL G+ I V+N+D+G + VV G VRV Sbjct: 224 RGRALEHGQEGERIRVENLDSGREIQARVVGEGQVRV 260 >gi|148976388|ref|ZP_01813094.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales bacterium SWAT-3] gi|145964211|gb|EDK29467.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales bacterium SWAT-3] Length = 234 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE++ + + ++ + R + + V+G ++ L P V+ + V+ R Sbjct: 124 GEIIGQYDVTTAMISLNKFRRQGFTAPEQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 KV I +G MTI+T G AL+D S+GD + VKN + ++ G V + V V Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTNMSEVTV 232 >gi|77166141|ref|YP_344666.1| flageller protein FlgA [Nitrosococcus oceani ATCC 19707] gi|254435735|ref|ZP_05049242.1| SAF domain family [Nitrosococcus oceani AFC27] gi|76884455|gb|ABA59136.1| flagellar protein FlgA [Nitrosococcus oceani ATCC 19707] gi|207088846|gb|EDZ66118.1| SAF domain family [Nitrosococcus oceani AFC27] Length = 235 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 65/131 (49%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S+ +V G +V + I++G L+ L+ + S +R Y + VG +R + Sbjct: 103 SVKMAVYGKVLVATHSISSGFPLSLVDLRLERRDLSELRQGYLNEPAQAVGKRLKRPVGL 162 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 +I +L P +I RG +V ++ T + ++ G AL DA G+ I V+N + +V Sbjct: 163 GAIITPGMLEIPKLIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVRNTSSRRIVE 222 Query: 139 GSVVDTGTVRV 149 G+V G V+V Sbjct: 223 GTVTAAGLVQV 233 >gi|212634342|ref|YP_002310867.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella piezotolerans WP3] gi|212555826|gb|ACJ28280.1| Flagellar basal-body P-ring formation protein FlgA [Shewanella piezotolerans WP3] Length = 237 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + G++L+ S ++ V + +RG + VVG +R + P I + L Sbjct: 118 VVAKSTLGPGDLLSSSDVEIDYVEQTTLRGQQFDQVDQVVGARLKRRVAPQQPIFNNHL- 176 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 ++ +G V I N I T G AL D ++GD I +KN + ++ V G V Sbjct: 177 --CIVCKGDTVSIFARSENFEIKTVGEALHDGNLGDKIRIKNTHSQKTLNAKVTAVGQVE 234 Query: 149 V 149 V Sbjct: 235 V 235 >gi|320325083|gb|EFW81152.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. B076] gi|320329342|gb|EFW85335.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. race 4] gi|330880507|gb|EGH14656.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. race 4] Length = 222 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222 >gi|253702431|ref|YP_003023620.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M21] gi|251777281|gb|ACT19862.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M21] Length = 246 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GEVL+ S L + S RG Y D VGL + L + + L Sbjct: 124 VVAARTLERGEVLSASDLAVAKRDLSLARGGYLKEPDDAVGLRVKTTLRANTPVRKDNLE 183 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + V+ G V I+ + ++ +G A + GDVI V+N+ + ++ VVD TV+ Sbjct: 184 KVPVVKSGQMVTILAENDVVRVTASGRAKGAGAPGDVITVQNLSSQKDIAARVVDAATVK 243 Query: 149 V 149 V Sbjct: 244 V 244 >gi|289627754|ref|ZP_06460708.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647434|ref|ZP_06478777.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. 2250] gi|330866413|gb|EGH01122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 222 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222 >gi|260574400|ref|ZP_05842404.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp. SW2] gi|259023296|gb|EEW26588.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp. SW2] Length = 139 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 15/148 (10%) Query: 4 VRFLLFFSLY--VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 +RFL L+ + DSL A+ I A VL E+ +M + ++I G Sbjct: 1 MRFLALILLFPTLAQADSLVATR---------TIRAQTVLAET---DMTLVAADIPGALT 48 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + +GL R L I L P ++ R V + G +TI T G A++ Sbjct: 49 DT-GAALGLEARTTLYAGRPIRPGDLGAPAIVERNQVVSLAYHAGPLTILTEGRAMARGG 107 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +GDVIAV N+D+ VSG + G V+V Sbjct: 108 VGDVIAVMNLDSRTTVSGRIDAEGMVQV 135 >gi|258404728|ref|YP_003197470.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium retbaense DSM 5692] gi|257796955|gb|ACV67892.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium retbaense DSM 5692] Length = 326 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 39/70 (55%) Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 V+ SVL P ++ RG V + +G + I+ +G+A D + + I V+N TG + G Sbjct: 255 EVLDRSVLAAPILVQRGKPVTLEAVRGALVITASGVAQEDGGLQETIRVENRRTGKEIFG 314 Query: 140 SVVDTGTVRV 149 +VV TVRV Sbjct: 315 TVVSADTVRV 324 >gi|254227979|ref|ZP_04921409.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|262396039|ref|YP_003287892.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] gi|151939475|gb|EDN58303.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|262339633|gb|ACY53427.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] Length = 265 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +GL T R L V+ S L P +I +G +V +I ++ + ST G+AL D + G Sbjct: 180 QAIGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQ 239 Query: 126 IAVKNIDTGVMV 137 I V+N+ +G ++ Sbjct: 240 IEVENLSSGKVI 251 >gi|298487866|ref|ZP_07005906.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157591|gb|EFH98671.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 252 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 149 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 206 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 207 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 252 >gi|330892071|gb|EGH24732.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. mori str. 301020] gi|330986458|gb|EGH84561.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 222 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARS 176 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222 >gi|269960112|ref|ZP_06174488.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3] gi|269835083|gb|EEZ89166.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3] Length = 265 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I+ + L+ S LK T S + ++ +GL T R + +I + L Sbjct: 144 LVATSTIDRNDTLSASNLKSETRTISR-QDDFYTKANQAIGLETTRRIRAGQIIDPTNLS 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P +I +G +V II ++G + ST G+AL G I V+N +G ++ Sbjct: 203 SPPLIEKGNEVIIIASKGGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251 >gi|153837099|ref|ZP_01989766.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ3810] gi|149749687|gb|EDM60432.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ3810] Length = 179 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ +SV VV + + EV+ + LK ++ + ++ K +GL T R L Sbjct: 48 TIKSSVTLPVVVATTTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 106 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G Sbjct: 107 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 162 >gi|257484959|ref|ZP_05639000.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011033|gb|EGH91089.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 222 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E V S++ + S+ VG R ++ D V+ L +P +I +G +V II Sbjct: 119 LRERDV--SSLGQGFLASLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVIIIARS 176 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G++ + G A+SD + I VKN+++ ++ +V G V V + Sbjct: 177 GSLAVRMPGEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 222 >gi|328470097|gb|EGF41008.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 10329] Length = 181 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ +SV VV + + EV+ + LK ++ + ++ K +GL T R L Sbjct: 50 TIKSSVTLPVVVAATTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 108 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G Sbjct: 109 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164 >gi|283784081|ref|YP_003363946.1| lateral flagellar P-ring addition protein [Citrobacter rodentium ICC168] gi|282947535|emb|CBG87087.1| lateral flagellar P-ring addition protein [Citrobacter rodentium ICC168] Length = 256 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 VI A +VL LK V S R + + +G+ ++R L P + + L P ++ Sbjct: 142 VITADDVL----LKRYNV--SGQRSGLLMDLNEAIGMTSKRPLQPGKPLNRAQLVAPVLV 195 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 R V I+ G +T + G+AL + G+VI ++N + ++SG V D G V Sbjct: 196 KRDQPVMIVSRLGGITAAMPGVALKNGRKGEVIKIRNAASQRIISGVVDDAGVV 249 >gi|146277660|ref|YP_001167819.1| flagellar basal body P-ring biosynthesis protein-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145555901|gb|ABP70514.1| Flagellar basal body P-ring biosynthesis protein-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 225 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 6/74 (8%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 V L + +LP H+ P ++++RG V + + G + + TAG AL+DA++GD++ Sbjct: 145 VALAPGQPILPRHLEPD------WLVTRGGPVALRVAVGPIEVLTAGEALADAALGDLVE 198 Query: 128 VKNIDTGVMVSGSV 141 V+N+ +G ++ +V Sbjct: 199 VRNLSSGAILRATV 212 >gi|308126103|ref|ZP_05907780.2| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ4037] gi|308109249|gb|EFO46789.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ4037] Length = 181 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ +SV VV + + EV+ + LK ++ + ++ K +GL T R L Sbjct: 50 TIKSSVTLPVVVAATTVGRSEVVTANHLK-LETRTISRSDDFYTDPKHAIGLETTRRLRA 108 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G Sbjct: 109 GQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164 >gi|300817274|ref|ZP_07097492.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] gi|300530250|gb|EFK51312.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] Length = 245 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R + + D +GL ++ L P I L P ++ R V I Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMI 193 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N + ++S V ++G V V Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQWVISAMVAESGVVTTV 242 >gi|242238965|ref|YP_002987146.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech703] gi|242131022|gb|ACS85324.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech703] Length = 234 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G VT R+L I +L + I G V+++++ +I++ G AL +A++ D Sbjct: 150 EAIGNVTTRMLGAGQAISAKMLRSAWAIKMGEPVQVVVSGTGFSINSEGKALENAAVNDK 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+ +D+G ++SG + G VR++ Sbjct: 210 VRVR-MDSGQIISGIAAEKGLVRII 233 >gi|218708798|ref|YP_002416419.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio splendidus LGP32] gi|218321817|emb|CAV17785.1| Flagellar basal body P-ring biosynthesis protein FlgA [Vibrio splendidus LGP32] Length = 248 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE++ + + ++ + R + + V+G ++ L P V+ + V+ R Sbjct: 138 GEIVGQYDVTTAMISLNKFRRQGFTTPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 194 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 KV I +G MTI+T G AL+D S+GD + VKN + ++ G V V V Sbjct: 195 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 246 >gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria pomeroyi DSS-3] gi|56676836|gb|AAV93502.1| flagellar basal-body P-ring formation protein FlgA [Ruegeria pomeroyi DSS-3] Length = 138 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L + +VP+ I A E++ +++ + ++ + G++ +V+G R L Sbjct: 12 LAQTAAAEVLVPTRTIRAKEIIGA---EDLMLKSAEVPGSFTDP-AEVIGQEARVALYAG 67 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I + + P ++ R V + G + I+T G AL + GDVI V N+ + VSG Sbjct: 68 RPIRYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSG 127 Query: 140 SVVDTGTVRV 149 + G++ V Sbjct: 128 QIRPNGSIEV 137 >gi|254464729|ref|ZP_05078140.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium Y4I] gi|206685637|gb|EDZ46119.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium Y4I] Length = 140 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 16/127 (12%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR------RVLLPDHVI 82 ++P I A E++N +++ + N I G + DV G+ R R L P + Sbjct: 23 LIPLRTIRAKEIVNP---EDLALKNGEILGALSDP-ADVTGMEARVSLYAGRPLRPGDIG 78 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 P P +I R V +I QG +TI+ G AL + G+ + V N+ + V+G + Sbjct: 79 P------PAIIERNDLVTLIFRQGVLTIAAEGRALGRGAAGEAVRVMNLSSRTTVTGRIK 132 Query: 143 DTGTVRV 149 + G+V V Sbjct: 133 EDGSVEV 139 >gi|330961187|gb|EGH61447.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 192 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 49/98 (50%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ + S+ VG R ++ D VI L +P +I +G +V II G + + Sbjct: 95 SSLGQGFLASLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARTGTLAVRMP 154 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G A+SD + I VKN+++ ++ +V G V V + Sbjct: 155 GEAMSDGGFNEQIRVKNLNSQRVIKANVTGPGQVEVAM 192 >gi|84514783|ref|ZP_01002146.1| flagellar basal-body P-ring formation protein FlgA [Loktanella vestfoldensis SKA53] gi|84510942|gb|EAQ07396.1| flagellar basal-body P-ring formation protein FlgA [Loktanella vestfoldensis SKA53] Length = 237 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLH--RPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 +I+DVVG V + L P +P+S H R + I+ V + + G + I + GIAL Sbjct: 145 TIEDVVGRVLSQSLTPR--VPVSPRHLQRDWAINADDIVTLQIVNGGIEIESPGIALEPG 202 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 IGD I ++N+ +G V G + V+V+ K Sbjct: 203 QIGDNIRLRNLSSGSEVIGRISQERKVQVISK 234 >gi|86146161|ref|ZP_01064487.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. MED222] gi|85836108|gb|EAQ54240.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. MED222] Length = 234 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE++ + + ++ + R + + V+G ++ L P V+ + V+ R Sbjct: 124 GEIVGQYDVTTAMISLNKFRRQGFTTPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 KV I +G MTI+T G AL+D S+GD + VKN + ++ G V V V Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 232 >gi|27363711|ref|NP_759239.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus CMCP6] gi|27359827|gb|AAO08766.1| Flagellar basal-body P-ring formation protein flgA [Vibrio vulnificus CMCP6] Length = 248 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ GE+++ S + + R I VVG +RVL P V+ + V+ Sbjct: 135 LSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVGAKVKRVLRPGDVVERGDI---CVVC 191 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 R KV I T+ MTI+T G +L D + G+ + VKN + ++ G V TG V V Sbjct: 192 RNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVKNDKSQRIIEGIV--TGIAEVTV 246 >gi|37679141|ref|NP_933750.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus YJ016] gi|320157115|ref|YP_004189494.1| flagellar basal-body P-ring formation protein FlgA [Vibrio vulnificus MO6-24/O] gi|37197883|dbj|BAC93721.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus YJ016] gi|319932427|gb|ADV87291.1| flagellar basal-body P-ring formation protein FlgA [Vibrio vulnificus MO6-24/O] Length = 248 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ GE+++ S + + R I VVG +RVL P V+ + V+ Sbjct: 135 LSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVGAKVKRVLRPGDVVERGDI---CVVC 191 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 R KV I T+ MTI+T G +L D + G+ + VKN + ++ G V TG V V Sbjct: 192 RNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVKNDKSQRIIEGIV--TGIAEVTV 246 >gi|84388085|ref|ZP_00990981.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus 12B01] gi|84377152|gb|EAP94022.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus 12B01] Length = 234 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GE++ + + ++ + R + + V+G ++ L P V+ + V+ R Sbjct: 124 GEIVGQYDVTTAMISLNKFRRQGFTAPQQVIGAKVKKNLRPGDVVERGDI---CVVCRNE 180 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 KV I +G MTI+T G AL+D S+GD + VKN + ++ G V V V Sbjct: 181 KVIIQAVKGGMTITTKGTALTDGSMGDQVRVKNDKSQRIIEGIVTSMSEVTV 232 >gi|288962679|ref|YP_003452973.1| FlgA protein [Azospirillum sp. B510] gi|288914945|dbj|BAI76429.1| FlgA protein [Azospirillum sp. B510] Length = 246 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 57/120 (47%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP I GEV+ + L +++ + S + +VG RR + ++ + + Sbjct: 116 VPVRRIRPGEVIEAADLTTIRLPLERAGAGFITSAEALVGQSPRRQISAGRMVQVGSVGA 175 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P V+ R V ++ G + ++ G AL + +GD + V NI + +V+G+V TV V Sbjct: 176 PIVVQRNRPVTLVYEDGALMLAARGRALQEGGVGDTVRVMNIASSTIVTGTVTGAETVSV 235 >gi|148980287|ref|ZP_01815974.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3] gi|145961306|gb|EDK26616.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3] Length = 235 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 45/84 (53%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 ++ G +R + ++ S ++ Y + +G V ++ ++ + T G+AL IGD Sbjct: 151 EIAGSKIKRSVNKGDLLTTSSMYLDYAVEKGHAVDVVFQSKSIRLETLGMALESGLIGDT 210 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149 ++VKN +G ++ G V++ VR+ Sbjct: 211 VSVKNQQSGKLLRGVVIEKNRVRI 234 >gi|23015789|ref|ZP_00055556.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magnetotacticum MS-1] Length = 324 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 + VRF + S+Y + + A +G GEV+ E+ ++ ++V +R + Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMGR----------GEVIAEADIQWVEVREEVVRRDIV 225 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + + ++G R L + + + +P + + + V I+L MT++ G A+ D S Sbjct: 226 SNPRMLIGQEPRYQLRAGVPVRTNEVQKPLAVGKNSSVTIVLRSKFMTLTAQGRAMEDGS 285 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +GDVI V N+ + V + G V V+ Sbjct: 286 VGDVIRVTNVQSKQTVDARIEGPGQVSVM 314 >gi|256020224|ref|ZP_05434089.1| flagella basal body P-ring formation protein FlgA [Shigella sp. D9] gi|260853462|ref|YP_003227353.1| putative lateral flagellar P-ring addition protein [Escherichia coli O26:H11 str. 11368] gi|260866409|ref|YP_003232811.1| putative lateral flagellar P-ring addition protein [Escherichia coli O111:H- str. 11128] gi|307313523|ref|ZP_07593144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|331666542|ref|ZP_08367416.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] gi|332281386|ref|ZP_08393799.1| lateral flagellar P-ring addition protein [Shigella sp. D9] gi|257752111|dbj|BAI23613.1| predicted lateral flagellar P-ring addition protein [Escherichia coli O26:H11 str. 11368] gi|257762765|dbj|BAI34260.1| predicted lateral flagellar P-ring addition protein [Escherichia coli O111:H- str. 11128] gi|306906691|gb|EFN37202.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|315059538|gb|ADT73865.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli W] gi|323158107|gb|EFZ44206.1| lateral flagellar P-ring addition protein [Escherichia coli EPECa14] gi|323178498|gb|EFZ64076.1| lateral flagellar P-ring addition protein [Escherichia coli 1180] gi|323379903|gb|ADX52171.1| flagella basal body P-ring formation protein FlgA [Escherichia coli KO11] gi|331065766|gb|EGI37650.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] gi|332103738|gb|EGJ07084.1| lateral flagellar P-ring addition protein [Shigella sp. D9] Length = 245 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R + + D +GL ++ L P I L P ++ R V I Sbjct: 136 NDVELKPYNV--SAQRRDVLMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMI 193 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N + ++S V ++G V V Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|269965640|ref|ZP_06179753.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] gi|269829708|gb|EEZ83944.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] Length = 265 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + VGL T R L V+ S L P +I +G +V +I ++ + ST G+AL D + G Sbjct: 179 EQAVGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQ 238 Query: 125 VIAVKNIDTGVMV 137 I V+N +G ++ Sbjct: 239 QIDVENPSSGKVI 251 >gi|312884838|ref|ZP_07744530.1| flagellar basal-body P-ring formation protein FlgA [Vibrio caribbenthicus ATCC BAA-2122] gi|309367490|gb|EFP95050.1| flagellar basal-body P-ring formation protein FlgA [Vibrio caribbenthicus ATCC BAA-2122] Length = 265 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y H + DV+ T R + H+I L+ P ++ G +V I ++ + +T GIAL Sbjct: 175 YTH-VSDVLEKTTTRRIRSGHIITPKTLNAPAMVEVGNQVIISASKDRFSATTKGIALEK 233 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G+ I V+N+ +G + +V+ V+ Sbjct: 234 GNKGEQITVQNVSSGKTIQATVIGHNKVQT 263 >gi|260886212|ref|ZP_05897475.1| putative flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|330839792|ref|YP_004414372.1| flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|260863931|gb|EEX78431.1| putative flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|329747556|gb|AEC00913.1| flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] Length = 244 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 4/113 (3%) Query: 39 EVLNES--RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 + L+E+ R +E +VT +RG +V+G V R++ V+ +L +P V+ G Sbjct: 132 QALSEADMRFEEREVTR--VRGRCLKDKGEVLGHVVSRMVQEGAVLSEDLLRQPVVMESG 189 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 A V I+ + + +G+AL+ +G I V+N + ++ V+D TV + Sbjct: 190 AAVTIVSRYNGIEVRVSGVALTRGRVGQKIRVRNAASRKVMLARVLDASTVEI 242 >gi|312962594|ref|ZP_07777084.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas fluorescens WH6] gi|311283174|gb|EFQ61765.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas fluorescens WH6] Length = 254 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 48/98 (48%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S I Y S+ +G R ++ D VI L L + VI +G +V I + G + + Sbjct: 157 SQINQGYLTSLDQALGQKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGTLNVKMP 216 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G ALS+ + + I VKN+++ ++ V G V V + Sbjct: 217 GEALSNGGMSEQIRVKNLNSNRVIKARVTAPGQVEVAL 254 >gi|89902473|ref|YP_524944.1| flageller protein FlgA [Rhodoferax ferrireducens T118] gi|89347210|gb|ABD71413.1| Flageller protein FlgA [Rhodoferax ferrireducens T118] Length = 246 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G A V ++AG L + + E +V + R + +G V R L + Sbjct: 122 GQAWVVKGQVSAGAALTQDDVMEAEVDWAEQREAIISNPDQWLGQVANRALTSGQALRQG 181 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ V GA++R+ + I++ G ALS +G VK ++ G ++SG V+D+ Sbjct: 182 MIRPAEVFRAGAQIRVQVQGAGFEITSDGQALSAGVVGQPARVK-MNNGHVMSGEVLDSR 240 Query: 146 TVRVVV 151 TVR+ + Sbjct: 241 TVRLEI 246 >gi|91224203|ref|ZP_01259466.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] gi|91191114|gb|EAS77380.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] Length = 236 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + VGL T R L V+ S L P +I +G +V +I ++ + ST G+AL D + G Sbjct: 150 EQAVGLETSRRLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQ 209 Query: 125 VIAVKNIDTGVMV 137 I V+N +G ++ Sbjct: 210 QIDVENPSSGKVI 222 >gi|326319093|ref|YP_004236765.1| flagella basal body P-ring formation protein FlgA [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375929|gb|ADX48198.1| flagella basal body P-ring formation protein FlgA [Acidovorax avenae subsp. avenae ATCC 19860] Length = 259 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G A V + + +G VL E+ + +V + + ++ VG V R L+ + Sbjct: 135 GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAIVANPENWVGQVASRPLMAGQALRQH 194 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ P GA VR++ ++++AG A++ SIG+ + V+ +D G +++G V + G Sbjct: 195 MVKAPMAFRAGAPVRVVAQGRGYSVTSAGQAVTAGSIGETVRVR-MDNGRVIAGIVSNDG 253 Query: 146 TVRV 149 TV V Sbjct: 254 TVEV 257 >gi|154253002|ref|YP_001413826.1| flagellar basal body P-ring biosynthesis protein FlgA [Parvibaculum lavamentivorans DS-1] gi|154156952|gb|ABS64169.1| SAF domain protein [Parvibaculum lavamentivorans DS-1] Length = 326 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 55/115 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G+++ + +++ + + N SI +VG+ R + LS + P V+ Sbjct: 194 MQPGDIVRHQDIDWVRMPANRVSQNMIASIDHLVGMSPRHPARAGEPLRLSDMQPPLVVE 253 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + A+V + G +T++ G AL ++GD++ V NI + V G V +R+ Sbjct: 254 KNAQVDMTFVSGALTLTARGRALQSGAVGDIVNVLNIRSNRTVQGIVTGPNLIRI 308 >gi|331671800|ref|ZP_08372596.1| SAF domain protein [Escherichia coli TA280] gi|331070789|gb|EGI42148.1| SAF domain protein [Escherichia coli TA280] Length = 252 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R N D +G ++ L P I L P ++ R V I Sbjct: 143 NDVELKPYNV--SAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMI 200 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N + ++S V ++G V V Sbjct: 201 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 249 >gi|293408363|ref|ZP_06652202.1| conserved hypothetical protein [Escherichia coli B354] gi|291471541|gb|EFF14024.1| conserved hypothetical protein [Escherichia coli B354] Length = 245 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 43/88 (48%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 155 ELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQNAGITASMPGVALKNGRK 214 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+++ V+N + ++S V ++G V V Sbjct: 215 GEMVKVRNASSQRVISAMVEESGVVTTV 242 >gi|59889777|emb|CAH19132.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli] gi|284920041|emb|CBG33097.1| lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli 042] Length = 245 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R + D +GL ++ L P I L P ++ R V I Sbjct: 136 NDVELKPYNV--SAQRREVLMELDDAIGLSSKHALQPGKPITKEELVSPVLVGRDQPVMI 193 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N + ++S V ++G V V Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|163803165|ref|ZP_02197048.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] gi|159173065|gb|EDP57898.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] Length = 228 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I EV++ S LK T S + ++ + V+GL T R + I + L Sbjct: 107 LVATSTIGRNEVISASNLKTETRTISR-QNDFFTQMNQVIGLETTRRIRAGQTIAPTNLS 165 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P +I +G +V II ++ + ST G+AL G I V+N +G ++ Sbjct: 166 SPPLIEKGNEVLIIASKEGFSASTKGVALEQGKKGQQIEVENTRSGKVI 214 >gi|218703521|ref|YP_002411040.1| lateral flagellar P-ring addition FlgA-like protein [Escherichia coli UMN026] gi|293403351|ref|ZP_06647442.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298378963|ref|ZP_06988844.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900365|ref|ZP_07118540.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] gi|218430618|emb|CAR11484.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli UMN026] gi|291429204|gb|EFF02224.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298280076|gb|EFI21580.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356121|gb|EFJ71991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] Length = 245 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 N+ LK V S R N D +G ++ L P I L P ++ R V I Sbjct: 136 NDVELKPYNV--SAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMI 193 Query: 102 ILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + +T S G+AL + G+++ V+N + ++S V ++G V V Sbjct: 194 VYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|145297451|ref|YP_001140292.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA [Aeromonas salmonicida subsp. salmonicida A449] gi|142850223|gb|ABO88544.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA [Aeromonas salmonicida subsp. salmonicida A449] Length = 226 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 53/113 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+ + L E + S ++ + S + +VG + R L +I L + + + Sbjct: 110 IQKGQAIRAGDLVEKSLDISRLQRGFVPSSESLVGSKSTRNLRMGQLIGELDLQKAWAVR 169 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 G V I + +T G AL++ +IGD I V+NI +G + V+D G V Sbjct: 170 EGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNISSGKEIQAWVIDKGEV 222 >gi|28897546|ref|NP_797151.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus RIMD 2210633] gi|308094616|ref|ZP_05890645.2| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AN-5034] gi|308125762|ref|ZP_05777207.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus K5030] gi|308126465|ref|ZP_05910342.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus AQ4037] gi|5361002|gb|AAD42909.1|U12817_3 polar flagellar FlgA homolog [Vibrio parahaemolyticus] gi|28805758|dbj|BAC59035.1| polar flagellar FlgA [Vibrio parahaemolyticus RIMD 2210633] gi|308090165|gb|EFO39860.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AN-5034] gi|308106761|gb|EFO44301.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus AQ4037] gi|308115098|gb|EFO52638.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus K5030] Length = 248 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + S + VVG + R V L D V V Sbjct: 129 IVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC 188 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I + MTI+T G AL D + GD + VKN + ++ G V D + Sbjct: 189 ----VVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEI 244 Query: 148 RV 149 V Sbjct: 245 TV 246 >gi|229592136|ref|YP_002874255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas fluorescens SBW25] gi|229364002|emb|CAY51553.1| putative flagella basal body P-ring formation protein [Pseudomonas fluorescens SBW25] Length = 236 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 48/98 (48%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S I Y S+ VG R ++ D VI L L + VI +G +V I + G + + Sbjct: 139 SMISQGYLTSLDQAVGQKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGGLNVKMP 198 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G ALS+ + + I VKN+++ ++ V G V V + Sbjct: 199 GEALSNGGMSEQIRVKNLNSNRVIKARVTAPGQVEVAL 236 >gi|32490786|ref|NP_871040.1| hypothetical protein WGLp037 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165992|dbj|BAC24183.1| flgA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 225 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +F V S +I +G +++E +K + NI N S + + G ++ + Sbjct: 91 LLKIFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTKNIPQNIILSNQKISGKISTISI 150 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 I S+L P++I +G KV +I TI GI++ + +I D++ VK + +G + Sbjct: 151 GIGQPITTSMLKSPWIIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKI 209 Query: 137 VSG 139 G Sbjct: 210 FQG 212 >gi|258622484|ref|ZP_05717506.1| Flagellar protein flgA precursor [Vibrio mimicus VM573] gi|262173350|ref|ZP_06041027.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|258585184|gb|EEW09911.1| Flagellar protein flgA precursor [Vibrio mimicus VM573] gi|261890708|gb|EEY36695.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] Length = 265 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + E + S LK + T + Y ++ + V+GL T R + ++ ++L Sbjct: 144 VVAKTTLRRDETIQASDLKIEKRTLTRQEDFYTNT-QQVIGLETTRRIRSGQIVSPNILR 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ +G +V II ++ T +T GIAL G I V+N +G ++ V D V Sbjct: 203 SSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVIRAVVTDLNQV 261 >gi|304321134|ref|YP_003854777.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis HTCC2503] gi|303300036|gb|ADM09635.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis HTCC2503] Length = 125 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 38 GEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 GEV +RL V + S + GN + + +VG R + P I S ++ R Sbjct: 12 GEVHANARLPAGTVIDGSGLAGNE-NDVDRLVGRQLTRTIFPGRTISFSDTKEADLVDRN 70 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + VRI+ +G M I T G AL + G+ I V N+++ ++ + G VRV Sbjct: 71 STVRIVAVKGPMRIETKGRALGAGAEGEEILVMNLESRRTITAVISGPGEVRV 123 >gi|74101654|gb|AAZ99744.1| FlgAL [Aeromonas hydrophila] Length = 270 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 53/113 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+ + L E + S ++ + S + +VG + R L +I L + + I Sbjct: 154 IQKGQTIRTGDLVEKSLDISRLQRGFVPSSESLVGSKSNRNLRMGQLIGELDLQKAWAIR 213 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 G V I + +T G AL++ +IGD I V+NI +G + V++ G V Sbjct: 214 EGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNISSGKEIQAWVIEKGEV 266 >gi|34497155|ref|NP_901370.1| flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] gi|34103012|gb|AAQ59375.1| probable flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] Length = 236 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 GL +R L D + L P + RG V I+ Q + +++AG AL++ G+VI V Sbjct: 154 GLASRTPLRQDQPLRRRQLQPPQWVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRV 213 Query: 129 KNIDTGVMVSGSVVDTGTV 147 +N + +++ V G V Sbjct: 214 RNTSSNKIINARVSAQGEV 232 >gi|153839087|ref|ZP_01991754.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AQ3810] gi|149747425|gb|EDM58385.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AQ3810] Length = 248 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + S + VVG + R V L D V V Sbjct: 129 IVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC 188 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I + MTI+T G AL D + GD + VKN + ++ G V D + Sbjct: 189 ----VVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEI 244 Query: 148 RV 149 + Sbjct: 245 TI 246 >gi|292490649|ref|YP_003526088.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus halophilus Nc4] gi|291579244|gb|ADE13701.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus halophilus Nc4] Length = 221 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 6/123 (4%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 H +VP ++ ++ E R E +R Y V G +R L VI V Sbjct: 103 HPLVPGSPLSLADIHLERRNLE------QLRQGYLRDPAQVAGKRLKRPLGLGAVITPEV 156 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L P ++ RG +V +I + + G AL DA G+ I V+N + +V G+V G Sbjct: 157 LEIPKLVRRGQQVILIAKVPGLQVHMKGQALEDAGAGEHIRVRNNSSQRIVEGTVTADGI 216 Query: 147 VRV 149 V+V Sbjct: 217 VQV 219 >gi|322421661|ref|YP_004200884.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M18] gi|320128048|gb|ADW15608.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M18] Length = 238 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 59/127 (46%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + VV + + GEVL+ S L ++ + ++G Y I + GL + L + + Sbjct: 110 EALAEMVVAARTLERGEVLSASDLAVVKRDLAQVQGRYFKEIGEAAGLRVKSTLKANSPV 169 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L + ++ G V I+ + I+ G A + GD+I V+N+ + ++ VV Sbjct: 170 RKDNLEKVPIVKSGQVVTIVAENDVVRITATGRAKVAGAQGDLITVQNLSSQKEIAARVV 229 Query: 143 DTGTVRV 149 D TV+V Sbjct: 230 DAATVKV 236 >gi|15598546|ref|NP_252040.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PAO1] gi|218890454|ref|YP_002439318.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa LESB58] gi|254236312|ref|ZP_04929635.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719] gi|254242037|ref|ZP_04935359.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192] gi|9949483|gb|AAG06738.1|AE004757_7 hypothetical protein PA3350 [Pseudomonas aeruginosa PAO1] gi|126168243|gb|EAZ53754.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719] gi|126195415|gb|EAZ59478.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192] gi|218770677|emb|CAW26442.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa LESB58] Length = 232 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ L + + +G +V I+ + + G ALSD + G I Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230 >gi|120613055|ref|YP_972733.1| SAF domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591519|gb|ABM34959.1| SAF domain protein [Acidovorax citrulli AAC00-1] Length = 259 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G A V + + +G VL E+ + +V + + ++ VG V R L+ + Sbjct: 135 GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAIVANPENWVGQVASRPLMAGQALRQH 194 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ P G+ VR++ ++++AG A++ SIG+ + V+ +D G +++G V + G Sbjct: 195 MVKAPMAFRAGSPVRVVAQGRGYSVTSAGQAVTAGSIGETVRVR-MDNGRIIAGIVSNDG 253 Query: 146 TVRV 149 TV V Sbjct: 254 TVEV 257 >gi|301646809|ref|ZP_07246661.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|331640709|ref|ZP_08341856.1| SAF domain protein [Escherichia coli H736] gi|301075002|gb|EFK89808.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|331040083|gb|EGI12291.1| SAF domain protein [Escherichia coli H736] Length = 252 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 42/88 (47%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 162 ELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRK 221 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+++ V+N + ++S V ++G V V Sbjct: 222 GEMVKVRNASSQRVISAMVAESGVVTTV 249 >gi|49082058|gb|AAT50429.1| PA3350 [synthetic construct] Length = 233 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ L + + +G +V I+ + + G ALSD + G I Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230 >gi|107102882|ref|ZP_01366800.1| hypothetical protein PaerPA_01003950 [Pseudomonas aeruginosa PACS2] Length = 232 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ L + + +G +V I+ + + G ALSD + G I Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 208 RVRNLRSQRIIKARVIEPGTVEV 230 >gi|152985501|ref|YP_001347163.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PA7] gi|150960659|gb|ABR82684.1| hypothetical protein PSPA7_1780 [Pseudomonas aeruginosa PA7] Length = 232 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 44/83 (53%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ + L + + +G +V I+ + + G AL+D + G I Sbjct: 148 VVGQKLRRPVINDQVLAPAFLEQAEAVRKGDQVVILARTATINVKMPGEALADGAPGQQI 207 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 208 RVRNLRSQRVIKARVLEPGTVEV 230 >gi|306813308|ref|ZP_07447501.1| flagella basal body P-ring formation protein FlgA [Escherichia coli NC101] gi|305854071|gb|EFM54510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli NC101] Length = 245 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 41/85 (48%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 D +G ++ L P I L P ++ R V I+ +T S G+AL + G++ Sbjct: 158 DAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEM 217 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+N + ++S V ++G V V Sbjct: 218 VKVRNASSQRVISAMVAESGVVTTV 242 >gi|70731829|ref|YP_261571.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas fluorescens Pf-5] gi|68346128|gb|AAY93734.1| flagellar basal-body P-ring formation protein FlgA, putative [Pseudomonas fluorescens Pf-5] Length = 253 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105 L+E ++ +N Y S+ +G R ++ D ++ L+ L + V+ +G +V I Sbjct: 150 LRERDISQNN--QGYLTSVDQAIGQKLVRPMVADQLVTLAHLEQAEVVRKGDQVVISARS 207 Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G + + G ALS+ + + I VKN+++ ++ + G V V + Sbjct: 208 GTLNVRMPGEALSNGGMSEQIRVKNLNSQRVIKARITAPGQVEVAM 253 >gi|58039416|ref|YP_191380.1| flagellar basal body P-ring biosynthesis protein FlgA [Gluconobacter oxydans 621H] gi|58001830|gb|AAW60724.1| Flagella basal body P ring formation protein FlgA [Gluconobacter oxydans 621H] Length = 330 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D VGL R VL V+ +S L P ++ RG+ V + ++ ++ +G L Sbjct: 220 QSPEDAVGLEARGVLAAGQVLSVSELAHPQLVHRGSPVVATFSGPSLHLTVSGTVLEAGG 279 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 GD + V N + ++++G VVD V V+ Sbjct: 280 KGDTVHVYNASSRMVLTGRVVDRTEVEVI 308 >gi|307136854|ref|ZP_07496210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H736] gi|315616831|gb|EFU97448.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 3431] Length = 245 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 42/88 (47%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 155 ELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRK 214 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+++ V+N + ++S V ++G V V Sbjct: 215 GEMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|308095530|ref|ZP_05906616.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus Peru-466] gi|308086102|gb|EFO35797.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus Peru-466] Length = 216 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 5/113 (4%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRG 96 GE+++ S + + R + S + VVG + R V L D V V V+ R Sbjct: 106 GEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC----VVCRN 161 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 KV I + MTI+T G AL D + GD + VKN + ++ G V D + V Sbjct: 162 EKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEITV 214 >gi|285018214|ref|YP_003375925.1| flagellar basal body p-ring biosynthesis protein [Xanthomonas albilineans GPE PC73] gi|283473432|emb|CBA15937.1| probable flagellar basal body p-ring biosynthesis protein [Xanthomonas albilineans] Length = 255 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Query: 3 CVR---FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 C R + LF + V + + V+ + I A +++ E R + I G Sbjct: 112 CPRDAGWRLFVPVKVRRMQQVL--VLARGLTAGETIGAADIVPEKR------DAARIVGA 163 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 VG + RR L ++ L L P ++ RG V ++ +G + + AG A+SD Sbjct: 164 VMTDPAVAVGKLVRRTLPAGTLLSLGDLVSPRLVRRGDNVALVARKGGLEVRMAGRAMSD 223 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 A + + V+N+ + +V G+V G V Sbjct: 224 AGENERVTVENLSSRRIVQGTVSQNGDV 251 >gi|116051365|ref|YP_789802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa UCBPP-PA14] gi|296388142|ref|ZP_06877617.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PAb1] gi|313108700|ref|ZP_07794696.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa 39016] gi|115586586|gb|ABJ12601.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310881198|gb|EFQ39792.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa 39016] Length = 232 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ L + + +G +V I+ + + G ALSD + G I Sbjct: 148 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 207 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 208 RVRNLRSQRVIKARVIEPGTVEV 230 >gi|327254550|gb|EGE66166.1| lateral flagellar P-ring addition protein [Escherichia coli STEC_7v] Length = 236 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 43/87 (49%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + + +GL ++ L P + L P +I R V I+ +T S G+AL + G Sbjct: 147 LNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNGRKG 206 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +++ V+N + ++S V ++G V V Sbjct: 207 EMVKVRNASSQRVISAMVAESGVVTTV 233 >gi|222053733|ref|YP_002536095.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. FRC-32] gi|221563022|gb|ACM18994.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. FRC-32] Length = 226 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 57/115 (49%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + GEV++ + + + S ++G + + +VVG R + ++ I L R +I Sbjct: 110 LERGEVIDAADVAVQKRGLSRLQGRFVRDVDEVVGKRVRTAIRGNNPIRPDFLERVPLIK 169 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G V I+ ++ I+ AG A + + GD + V+N+ + + V+D TV+V Sbjct: 170 SGQLVTIVAENESLRITAAGKARNSGAEGDTVMVRNLASQKELPARVIDAETVKV 224 >gi|291336858|gb|ADD96390.1| predicted flagellar basal body P ring biosynthesis protein [uncultured organism MedDCM-OCT-S09-C206] Length = 239 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I+ G+V++E L I G Y H I V+G + + ++ L Y + Sbjct: 122 ISKGQVISEEYLGFEARPERQIHGAYNH-ISGVLGRKAKNNIAAGTILKARHLDTVYSVD 180 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 + V +I +TI+T+ IAL + +GD+IAVKN+ + Sbjct: 181 KNDSVLVIAANKAITITTSAIALENGQVGDMIAVKNVKS 219 >gi|323181543|gb|EFZ66963.1| lateral flagellar P-ring addition protein [Escherichia coli 1357] Length = 245 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 42/87 (48%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + D +G ++ L P I L P ++ R V I+ +T S G+AL + G Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKG 215 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +++ V+N + ++S V ++G V V Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|163784419|ref|ZP_02179303.1| flagella basal body P-ring formation protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880310|gb|EDP73930.1| flagella basal body P-ring formation protein [Hydrogenivirga sp. 128-5-R1-1] Length = 317 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AVV I G +++ +K +V N Y +I ++G R + I L Sbjct: 191 KAVVAKRYIPKGSIISYDDVKIDKVKAKN-DERYFTNINKLIGKKLRFAVKKGQPITLKY 249 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L + Y + R V ++ + I G AL + +GD+I V+N +G ++ V+ Sbjct: 250 LEKEYYVFRNTNVEVLYEKNGFRIRLLGRALENGELGDLIRVRNTSSGKVILCKVIGKNK 309 Query: 147 VRVV 150 V+ + Sbjct: 310 VKFI 313 >gi|332305609|ref|YP_004433460.1| flagella basal body P-ring formation protein FlgA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172938|gb|AEE22192.1| flagella basal body P-ring formation protein FlgA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 236 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 9/124 (7%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VI +AV P G +LN+S +K + + + +R ++ DV+G +R + P I Sbjct: 118 VISNAVSP------GTILNQSNIKLVDMNRALLRRTTFSTLDDVLGARIKRRVRPGQPIT 171 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + L + +G + I + M + G+A+ D +IGD I+V N + ++ V Sbjct: 172 PNNL---CFVCKGDTIVINASNPMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAS 228 Query: 144 TGTV 147 T V Sbjct: 229 TSEV 232 >gi|323191534|gb|EFZ76795.1| lateral flagellar P-ring addition protein [Escherichia coli RN587/1] Length = 245 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 41/85 (48%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 D +G ++ L P I L P ++ R V I+ +T S G+AL + G++ Sbjct: 158 DAIGFSSKHALQPGRPITKEELISPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEM 217 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+N + ++S V ++G V V Sbjct: 218 VKVRNASSQRVISAMVAESGVVTTV 242 >gi|260768766|ref|ZP_05877700.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260616796|gb|EEX41981.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] Length = 233 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 43/83 (51%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + V+G RR + H+I + L + YV+ +G V + T+ T A S+ IGD Sbjct: 148 EQVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAESNGLIGD 207 Query: 125 VIAVKNIDTGVMVSGSVVDTGTV 147 I V++ D+G ++S VV G V Sbjct: 208 TIWVRSRDSGRLLSVKVVGDGEV 230 >gi|323171059|gb|EFZ56708.1| lateral flagellar P-ring addition protein [Escherichia coli LT-68] Length = 245 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 42/87 (48%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + D +G ++ L P I L P ++ R V I+ +T S G+AL + G Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGHKG 215 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +++ V+N + ++S V ++G V V Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|156976137|ref|YP_001447043.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio harveyi ATCC BAA-1116] gi|156527731|gb|ABU72816.1| hypothetical protein VIBHAR_04908 [Vibrio harveyi ATCC BAA-1116] Length = 265 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I E ++ S LK T S + ++ +GL T R + +I + L Sbjct: 144 LVATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIRAGQIIDPTNLS 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P +I +G +V II ++ + ST G+AL G I V+NI +G ++ Sbjct: 203 SPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENISSGKVI 251 >gi|118581850|ref|YP_903100.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504560|gb|ABL01043.1| SAF domain protein [Pelobacter propionicus DSM 2379] Length = 238 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 54/116 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G V+ + L + + ++G Y +D VG R L P+ I L + +I Sbjct: 122 INHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPNAAIRSDQLEKVPLIR 181 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G V II M I+ G + S + GD I V+N+ + + V+D+ TV +V Sbjct: 182 AGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIV 237 >gi|237755438|ref|ZP_04584063.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium yellowstonense SS-5] gi|237692402|gb|EEP61385.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium yellowstonense SS-5] Length = 170 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%) Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y I + KV I+ N+ I G+AL + GD I VKNI TG + G V+ TV Sbjct: 106 KYKIVKNQKVGIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTV 163 >gi|300936121|ref|ZP_07151060.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] gi|300458699|gb|EFK22192.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] Length = 252 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 41/85 (48%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 D +G ++ L P I L P ++ R V I+ ++ S G+AL + G++ Sbjct: 165 DAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGISASMPGVALKNGRKGEM 224 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+N + ++S V ++G V V Sbjct: 225 VKVRNASSQRVISARVAESGVVTTV 249 >gi|323975934|gb|EGB71028.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TW10509] Length = 252 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 43/87 (49%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + + +GL ++ L P + L P +I R V I+ +T S G+AL + G Sbjct: 163 LNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNGRKG 222 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +++ V+N + ++S V ++G V V Sbjct: 223 EMVKVRNASSQRVISAIVAESGVVTTV 249 >gi|85058007|ref|YP_453709.1| flagellar basal body P-ring formation protein FlgA [Sodalis glossinidius str. 'morsitans'] gi|84778527|dbj|BAE73304.1| flagellar basal body P-ring formation protein FlgA [Sodalis glossinidius str. 'morsitans'] Length = 238 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 N + + V G +T R + + ++L P+ + +G V ++ + G A+S Sbjct: 136 NVIFATQPVTGSLTTRAIQAGQPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMS 195 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 DA++GD + V+ + +G MVSG+V + G V Sbjct: 196 DAAVGDALRVR-LASGQMVSGAVDNQGVV 223 >gi|85706166|ref|ZP_01037261.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] gi|85669330|gb|EAQ24196.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] Length = 139 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +RFL F + +++ +L VV + I A EVL + L + I H Sbjct: 2 MRFLTSFLMLIIANPAL-----ADMVVATRTIRAQEVLGPADL--LLKPGEGISDVTLH- 53 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 D++G R L P I + P VI R V ++ + I T G +LS A +G Sbjct: 54 --DLIGQEVRVALYPGRQIRAVDVGPPTVIERNQIVPLVYAHSGLRIETEGRSLSRAGVG 111 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTV 147 D + V N+ + VSG V TG + Sbjct: 112 DYVRVMNLASRATVSGRVTQTGHI 135 >gi|14581460|gb|AAK31635.1| FlgA [Pseudomonas aeruginosa] Length = 188 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVG RR ++ D V+ L + + +G +V I+ + + G ALSD + G I Sbjct: 104 VVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQI 163 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + ++ V++ GTV V Sbjct: 164 RVRNLRSQRIIKARVIEPGTVEV 186 >gi|312880334|ref|ZP_07740134.1| flagella basal body P-ring formation protein FlgA [Aminomonas paucivorans DSM 12260] gi|310783625|gb|EFQ24023.1| flagella basal body P-ring formation protein FlgA [Aminomonas paucivorans DSM 12260] Length = 312 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY---AHSIKDVVGLVTRRVLL 77 F V+ P VV + E+ +E I+ Y AHS + V G V R + Sbjct: 173 FVRVVLRWYQPQVVAKSPLRKGETIRREDVFLRLGIQDTYRLLAHSFQQVEGKVLRIPVK 232 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + VL R V+ G +V + G++ + G AL ++GD I V+N+DT +V Sbjct: 233 AGVPVAMEVLVRDEVVHAGNQVVLSSVVGSVAVEAKGRALEQGAVGDTIRVRNLDTRQIV 292 Query: 138 SGSVVDTGTVRVVVK 152 SG V+ G V ++ K Sbjct: 293 SGVVIGPGRVEILQK 307 >gi|262273533|ref|ZP_06051347.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] gi|262222511|gb|EEY73822.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] Length = 224 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 44/95 (46%) Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115 +R + + ++G RR + P ++ ++ RP + R +V I + M GI Sbjct: 129 VRHGFFTDTEPLIGKQVRRNISPGRILTPKLIDRPVWVKRDQEVIIEARRDTMIARMKGI 188 Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 AL + S GD+I VKN + + V GTV + Sbjct: 189 ALENGSEGDIIRVKNSTSEKEIRARVSSPGTVSTI 223 >gi|220934388|ref|YP_002513287.1| Flagellar basal body P-ring biosynthesis protein-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995698|gb|ACL72300.1| Flagellar basal body P-ring biosynthesis protein-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 262 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + +V G VV + G L L+ + + G Y + ++ Sbjct: 125 WSLYV----PVHVAVHGEVVVLGHPLPRGMQLEAQHLRLERHDVGALPGGYLNDLELARD 180 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +V RR L V+ ++ P ++ RG +V ++ + + G AL+D S G+ + V+ Sbjct: 181 MVLRRALPAGTVLTPQMVEPPRLVRRGQRVTLLAEGSAVNVRVEGEALADGSRGERVQVR 240 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ + +V G V+ G V Sbjct: 241 NLSSRRVVEGVVLSHGVV 258 >gi|146341905|ref|YP_001206953.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium sp. ORS278] gi|146194711|emb|CAL78736.1| putative flagellar protein FlgA [Bradyrhizobium sp. ORS278] Length = 351 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 16/155 (10%) Query: 5 RFLLFFSLYV----------LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54 RF + F L +++++ A V+ + + VI AG++ E R K Sbjct: 170 RFDIVFELGTAGSTKLRYTGTAIETVEAVVLTRNIDRNEVIRAGDLQTERRPK------V 223 Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 + G S + VG+ RR + + + L +P ++ R V +I + ++T G Sbjct: 224 ELGGAEPASRELAVGMQMRRPVRAGQALKATDLAKPDLVQRDQTVTLIYQTAGIYLTTRG 283 Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 AL + GDV++V N+ + ++G V+ G V + Sbjct: 284 KALESGTEGDVVSVLNLQSKRTITGRVIGRGQVSI 318 >gi|90408053|ref|ZP_01216224.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp. CNPT3] gi|90310810|gb|EAS38924.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp. CNPT3] Length = 230 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 11/127 (8%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP--- 83 ++ + + GE LN + +K +T S +RG K ++G +R + +I Sbjct: 109 RTIISAQALRKGETLNNNNIKVTYLTKSQLRGGSFSQKKILIGSRLKRNMGAQKIIKNRD 168 Query: 84 -LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 V + VI I + + I T+GIAL++A+IG+ + VKN + +V G+V Sbjct: 169 VCFVCQKDQVI-------ISAIKAGLVIKTSGIALNNANIGESVRVKNSRSQRIVVGTVS 221 Query: 143 DTGTVRV 149 V+V Sbjct: 222 AQKEVQV 228 >gi|302392938|ref|YP_003828758.1| flagella basal body P-ring formation protein FlgA [Acetohalobium arabaticum DSM 5501] gi|302205015|gb|ADL13693.1| flagella basal body P-ring formation protein FlgA [Acetohalobium arabaticum DSM 5501] Length = 328 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 37/62 (59%) Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P ++ R +V+II G + +STAG+AL + G+ I V+NI + + V+ TV+V Sbjct: 267 PPLVKRRDRVKIIAVVGRVRVSTAGVALESGTEGEHIKVRNIKSNREIMAKVIGKKTVKV 326 Query: 150 VV 151 ++ Sbjct: 327 IL 328 >gi|238758114|ref|ZP_04619294.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae ATCC 35236] gi|238703652|gb|EEP96189.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae ATCC 35236] Length = 226 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 50/83 (60%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R +VI G V+I+ I++ G A+++A++ D + V Sbjct: 145 GAVSLRQINAGQPLTRNMLRRLWVIKAGQDVQILAQGEGFNINSTGKAMNNAAVQDSVRV 204 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+++++ Sbjct: 205 R-MASGQIVSGTVADNGTIQIML 226 >gi|149191168|ref|ZP_01869426.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii AK1] gi|148835006|gb|EDL51985.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii AK1] Length = 235 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 42/84 (50%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +VVG +R + ++ S L+ Y + +G V ++ + + T G AL +GD Sbjct: 151 EVVGSKLKRSVKKGELLTTSRLYLDYDVEKGQAVDVVYQSETIRLETLGTALESGLVGDT 210 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149 ++V+N +G ++ G V VRV Sbjct: 211 VSVQNQQSGKLLRGVVTKKNQVRV 234 >gi|302878272|ref|YP_003846836.1| flagella basal body P-ring formation protein FlgA [Gallionella capsiferriformans ES-2] gi|302581061|gb|ADL55072.1| flagella basal body P-ring formation protein FlgA [Gallionella capsiferriformans ES-2] Length = 225 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 3/110 (2%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 G+++ E+ L +Q + G S+ +VG V R + +++ +L PY I +G Sbjct: 115 GQIVRETDLARLQTETTLNSGITDASL--IVGKVLRYSVAAGYILREDMLRPPYSIKQGQ 172 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V + + T+S++G+AL++AS G+ + + +G ++SG+ G + Sbjct: 173 TVNLSIQANGFTLSSSGVALNNASEGETVQART-SSGRVISGTASADGVI 221 >gi|15606189|ref|NP_213566.1| flagellar protein FlgA [Aquifex aeolicus VF5] gi|6225340|sp|O67005|FLGA_AQUAE RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|2983376|gb|AAC06962.1| flagellar protein FlgA [Aquifex aeolicus VF5] Length = 223 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I GE LN S ++E ++ N+ + + V L + + ++ S L + +++ Sbjct: 110 IYPGERLNFSNVEEREIYLERCPQNFKENFVNFVAL---KEIKKGTIVRRSYLKKEFLVK 166 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 RG V + GN+ I AL + G+VI V + + ++ G ++ GTV+++ Sbjct: 167 RGEIVNAVYENGNVVIRFRTKALENGYYGEVIRVLSPFSRKVIRGKIIGEGTVKIL 222 >gi|157363240|ref|YP_001470007.1| SAF domain-containing protein [Thermotoga lettingae TMO] gi|157313844|gb|ABV32943.1| SAF domain protein [Thermotoga lettingae TMO] Length = 219 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/105 (20%), Positives = 53/105 (50%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I +GE++ ++ ++ +GN+ ++++ V G V+R++ I L L + + Sbjct: 102 IKSGEIIKREDVELVEFDVFGKKGNFTNNLEVVAGKVSRKMFREGEPIDLFYLVKAPDVR 161 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 G + + G++ + L D + G+++ +N+DTG ++ G Sbjct: 162 AGQVLLAVFETGSVLATALVRVLHDGNFGEIVKARNVDTGFLIQG 206 >gi|170737034|ref|YP_001778294.1| flagella basal body P-ring formation protein FlgA [Burkholderia cenocepacia MC0-3] gi|169819222|gb|ACA93804.1| flagella basal body P-ring formation protein FlgA [Burkholderia cenocepacia MC0-3] Length = 252 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + + +G LNE+ K+ V + + + VG + RR + VI +L+ Sbjct: 128 LVATTALRSGHTLNEADFKQ-DVRDFALTPDALTDPALAVGRMLRRTVKAGQVIQARLLN 186 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 I RG V+I G + +S G A+ + ++ +VI VKN TG ++ V TV Sbjct: 187 GAETIRRGQAVQIEANTGPIRVSVPGTAMQNGAVDEVIRVKNASTGKVIFARVTGADTVE 246 Query: 149 VV 150 V Sbjct: 247 PV 248 >gi|328473460|gb|EGF44308.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus 10329] Length = 198 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVLHRPYVISRG 96 GE+++ S + + R + S + VVG + R V L D V V V+ R Sbjct: 88 GEIISASDVTTSMIELQRFRKDGFSSFEQVVGAKLKRSVRLGDVVERNDVC----VVCRN 143 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 KV I + MTI+T G AL D + GD + VKN + ++ G V D Sbjct: 144 EKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTD 190 >gi|109899408|ref|YP_662663.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudoalteromonas atlantica T6c] gi|109701689|gb|ABG41609.1| flagella basal body P ring formation protein FlgA [Pseudoalteromonas atlantica T6c] Length = 236 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VI +AV P G +LN+S ++ + + + +R ++ DV+G +R + P I Sbjct: 118 VISNAVSP------GTILNQSNIELINMNRALLRRTTFSNVDDVMGARIKRRVRPGQPIT 171 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + L + +G + I + M + G+A+ D +IGD I+V N + ++ V Sbjct: 172 PNNL---CFVCKGDTIIINASNSMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAS 228 Query: 144 TGTV 147 T V Sbjct: 229 TSEV 232 >gi|144897833|emb|CAM74697.1| Distal basal body ring component protein [Magnetospirillum gryphiswaldense MSR-1] Length = 317 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 55/115 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 +N G+++ E+ +K +++ R + + ++G R+ + D + S L RP ++ Sbjct: 193 LNRGDIITEADIKWVELRADVARRDIIIDVDQIIGQEPRQPVRADAPLRASELRRPVLVE 252 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 R A V + L NM++++ A GDVI + N+ + V V G V V Sbjct: 253 RNAMVTVTLKTANMSLTSQAKATEAGGKGDVIRITNLQSKRTVEAVVEGPGLVSV 307 >gi|2494515|sp|Q56892|FLGA_YEREN RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|793897|emb|CAA88191.1| flgA [Yersinia enterocolitica] Length = 224 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%) Query: 23 SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76 V GH V + + AGE L + ++K+ ++ + + N+A G V+ R + Sbjct: 97 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 150 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G + Sbjct: 151 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 209 Query: 137 VSGSVVDTGTVRVVV 151 VSG+V D GTV +++ Sbjct: 210 VSGTVADDGTVHILL 224 >gi|322832560|ref|YP_004212587.1| flagella basal body P-ring formation protein FlgA [Rahnella sp. Y9602] gi|321167761|gb|ADW73460.1| flagella basal body P-ring formation protein FlgA [Rahnella sp. Y9602] Length = 260 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S + V G+ R + + + LS+L RP+++ G +V++ T +S+AG A+++A+ Sbjct: 174 SQQAVNGITLRNISI-GQPLTLSMLRRPWMVHAGQEVQVQATGSGFNVSSAGKAMNNAAA 232 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + + ++ + +G +V+G+V G+V V + Sbjct: 233 NESVRIR-MPSGAIVNGTVGSDGSVTVTI 260 >gi|332161318|ref|YP_004297895.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665548|gb|ADZ42192.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 226 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%) Query: 23 SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76 V GH V + + AGE L + ++K+ ++ + + N+A G V+ R + Sbjct: 99 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 152 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G + Sbjct: 153 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 211 Query: 137 VSGSVVDTGTVRVVV 151 VSG+V D GTV +++ Sbjct: 212 VSGTVADDGTVHILL 226 >gi|163802609|ref|ZP_02196501.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4] gi|159173692|gb|EDP58511.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4] Length = 216 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 9/121 (7%) Query: 28 AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82 A VP +V + GE+++ S + + R + + + VVG + R V L D V Sbjct: 92 ASVPMIVSTRQLGRGEIISTSDVTTSMIELQRFRKDGFTTYEQVVGAKLKRNVRLGDVVE 151 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 V V+ R KV I +G MTI+T G AL D + GD + VKN + ++ G V Sbjct: 152 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVT 207 Query: 143 D 143 + Sbjct: 208 N 208 >gi|149203124|ref|ZP_01880095.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] gi|149143670|gb|EDM31706.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] Length = 138 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +++D++G R L P + + P V+ R V +I +G + I T G +L A I Sbjct: 50 ALEDLIGQEARVALYPGRPVRQGDVGPPTVVERNQVVPLIYLRGGLEIMTEGRSLDRAGI 109 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTV 147 GD + V N+ + VSG V G + Sbjct: 110 GDHVRVMNLASRATVSGRVTANGQI 134 >gi|330860611|emb|CBX70908.1| flagella basal body P-ring formation protein flgA [Yersinia enterocolitica W22703] Length = 161 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%) Query: 23 SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76 V GH V + + AGE L + ++K+ ++ + + N+A G V+ R + Sbjct: 34 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 87 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G + Sbjct: 88 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 146 Query: 137 VSGSVVDTGTVRVVV 151 VSG+V D GTV +++ Sbjct: 147 VSGTVADDGTVHILL 161 >gi|188997556|ref|YP_001931807.1| Flagellar basal body P-ring biosynthesis protein-like protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932623|gb|ACD67253.1| Flagellar basal body P-ring biosynthesis protein-like protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 170 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + + + KV I+ N+ I G+AL + GD I VKNI TG + G V+ TV Sbjct: 106 KWAVVKNQKVSIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTV 163 >gi|148256793|ref|YP_001241378.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium sp. BTAi1] gi|146408966|gb|ABQ37472.1| putative flagellar protein FlgA [Bradyrhizobium sp. BTAi1] Length = 355 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 55/115 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ E++ S L+ + + + G S + VG+ RR + + + L +P ++ Sbjct: 207 VDRNEMIRSSDLQIERRPRAELAGGEPASRELAVGMQMRRAVRAGQALKTTDLAKPDLVQ 266 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 R V +I + ++T G AL + GDV++V N+ + V+G V G V V Sbjct: 267 RDQTVTLIYQTAGIYLTTRGKALEAGTDGDVVSVLNLQSKRTVTGRVTGRGQVSV 321 >gi|156973578|ref|YP_001444485.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio harveyi ATCC BAA-1116] gi|156525172|gb|ABU70258.1| hypothetical protein VIBHAR_01281 [Vibrio harveyi ATCC BAA-1116] Length = 248 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%) Query: 28 AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82 A VP +V + GE+++ S + + R + + V+G + R V L D V Sbjct: 124 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIGAKLKRNVRLGDVVE 183 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 V V+ R KV I +G MTI+T G AL D S GD + VKN + ++ G Sbjct: 184 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 236 >gi|330811241|ref|YP_004355703.1| flagella basal body P-ring formation protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379349|gb|AEA70699.1| Putative flagella basal body P-ring formation protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 254 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 49/98 (50%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S I + S+ +G R ++ D V+ L L + V+ +G +V I G++ + Sbjct: 157 SQITQGFLTSVDQAIGQKLVRPMVADQVVTLVHLEQAEVVRKGDQVVITARTGSLAVRMP 216 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G ALS+ + + I VKN+++ ++ V+ G V V + Sbjct: 217 GEALSNGGMREQIRVKNLNSQRVIKAQVMAPGQVEVAM 254 >gi|261344146|ref|ZP_05971790.1| flagella basal body P-ring formation protein FlgA [Providencia rustigianii DSM 4541] gi|282567739|gb|EFB73274.1| flagella basal body P-ring formation protein FlgA [Providencia rustigianii DSM 4541] Length = 222 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G + R + + S++ RP+ I G V + T N ++ G A+++A IG+ I V Sbjct: 140 GTIALRNITAGQTLTNSMVRRPWAIKSGQTVHVFATGNNFSVKYEGRAINNAVIGENIRV 199 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + I+ G +V+G + G+V+V + Sbjct: 200 RLIN-GQVVNGEAQENGSVQVAL 221 >gi|294140178|ref|YP_003556156.1| flagellar basal-body P-ring formation protein FlgA [Shewanella violacea DSS12] gi|293326647|dbj|BAJ01378.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella violacea DSS12] Length = 234 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115 +RG +++ +VVG +R + I + L + +G V I N I T G Sbjct: 142 LRGQQFNNLAEVVGTRVKRRTPANQPIFSNNL---CFVCKGDSVSIFARTDNFEIKTVGE 198 Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 AL D ++GD I +KN + V V+D G V V Sbjct: 199 ALQDGNLGDRIRIKNTYSHKTVDARVIDVGKVEV 232 >gi|153834451|ref|ZP_01987118.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] gi|148869147|gb|EDL68179.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] Length = 243 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%) Query: 28 AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVI 82 A VP +V + GE+++ S + + R + + V+G + R V L D V Sbjct: 119 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIGAKLKRNVRLGDVVE 178 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 V V+ R KV I +G MTI+T G AL D S GD + VKN + ++ G Sbjct: 179 RNDVC----VVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 231 >gi|91225867|ref|ZP_01260836.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] gi|91189517|gb|EAS75793.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] Length = 248 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + S VVG + R V L D V V Sbjct: 129 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVGAKLKRNVRLGDVVERNDVC 188 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I MTI+T G AL D S GD + VKN + ++ G V D + Sbjct: 189 ----VVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEGIVTDIAEI 244 Query: 148 RV 149 V Sbjct: 245 TV 246 >gi|85859197|ref|YP_461399.1| flagellar basal body P-ring biosynthesis protein [Syntrophus aciditrophicus SB] gi|85722288|gb|ABC77231.1| flagellar basal body P-ring biosynthesis protein [Syntrophus aciditrophicus SB] Length = 244 Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 38/67 (56%) Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S+L P + +G V++I G ++I+T G+A + ++G + +KNI + ++ V+ Sbjct: 178 SMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGN 237 Query: 145 GTVRVVV 151 V+V + Sbjct: 238 SVVKVEI 244 >gi|126738577|ref|ZP_01754282.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. SK209-2-6] gi|126720376|gb|EBA17082.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. SK209-2-6] Length = 138 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 15/149 (10%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 ++ LL F L ++ S A ++ VP I A E++ + L +V N + Sbjct: 1 MKHLLAF-LIAVTAQSALADIL----VPLRTIRAKEIIQATDLTFKKV-------NLPGA 48 Query: 64 IKD---VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D VVG+ R L P + + P ++ R V + QG +TI T G +L Sbjct: 49 LSDANVVVGMEARVALYPGRPMRAGDIGPPAIVDRNDLVTLAYRQGGLTIITEGRSLGRG 108 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 S G++I V N+ + V+G + G+V V Sbjct: 109 SEGEIIKVMNLASRSTVTGRINADGSVEV 137 >gi|260429306|ref|ZP_05783283.1| flagella basal body P-ring formation protein FlgA [Citreicella sp. SE45] gi|260419929|gb|EEX13182.1| flagella basal body P-ring formation protein FlgA [Citreicella sp. SE45] Length = 139 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Query: 61 AH-SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 AH S+ DVVG + P + + + P +I R V +I +G + I+T G AL+ Sbjct: 47 AHDSLADVVGQEALVAIYPGRPVLIGTVGIPALIERNQIVELIFAKGALQIATEGRALAR 106 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++G+ I V N+ + + G+V + G V Sbjct: 107 GAVGERIRVMNLSSRTTLFGTVTEAGAV 134 >gi|94500235|ref|ZP_01306768.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp. RED65] gi|94427534|gb|EAT12511.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp. RED65] Length = 248 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 67/123 (54%), Gaps = 4/123 (3%) Query: 31 PSVVINA---GEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 P VV+N ++ ++R ++++ N +++R Y ++V+G ++R L V+ + Sbjct: 124 PVVVLNQPVPKDIELQARHLDLEIHNLADLRSGYFLKKENVIGKQSKRGLAGQTVLNGRL 183 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + ++ +G +V I ++G M++ G AL+D G I VKN+ + ++ +V ++G Sbjct: 184 VLPALLVKKGDRVIISASKGPMSVKMPGEALNDGREGRQIRVKNLRSERIIRATVEESGV 243 Query: 147 VRV 149 V V Sbjct: 244 VSV 246 >gi|170021364|ref|YP_001726318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ATCC 8739] gi|188492061|ref|ZP_02999331.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] gi|169756292|gb|ACA78991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ATCC 8739] gi|188487260|gb|EDU62363.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] Length = 245 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 42/87 (48%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + D +G ++ L P I L P ++ R V I+ ++ S G+AL + G Sbjct: 156 LDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGISASMPGVALKNGRKG 215 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +++ V+N + ++S V ++G V V Sbjct: 216 EMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|183598613|ref|ZP_02960106.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827] gi|188020792|gb|EDU58832.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827] Length = 218 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S++ RP+ + G V + N ++ G A+++A+ G+ V+ I+ G +V+G ++ Sbjct: 152 SMMRRPWAVKAGQNVYVFANGHNFSVKYEGRAINNAATGENTRVRLIN-GQVVNGEALEN 210 Query: 145 GTVRVVVK 152 G+VRV +K Sbjct: 211 GSVRVALK 218 >gi|315180469|gb|ADT87383.1| flagellar basal body P-ring biosynthesis protein flgA [Vibrio furnissii NCTC 11218] Length = 233 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + V+G RR + H+I + L + YV+ +G V + T+ T A ++ IGD Sbjct: 148 EQVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAENNGLIGD 207 Query: 125 VIAVKNIDTGVMVSGSVVDTGTV 147 I V++ D+G ++S VV G V Sbjct: 208 TIWVRSRDSGRLLSVKVVGDGEV 230 >gi|149188060|ref|ZP_01866355.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] gi|148838048|gb|EDL54990.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] Length = 248 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 V+ R KV I +G MTIST G AL+D + GD + VKN + ++ G V TG + V Sbjct: 189 VVCRNEKVVIRAVKGEMTISTKGTALTDGANGDQVRVKNDKSQRIIEGIV--TGVAEITV 246 >gi|120554102|ref|YP_958453.1| SAF domain-containing protein [Marinobacter aquaeolei VT8] gi|120323951|gb|ABM18266.1| SAF domain [Marinobacter aquaeolei VT8] Length = 235 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + V G++ RR + V+ +L P I RG V I G+ ++S+ G AL+ A +G+ Sbjct: 149 ESVSGMMMRRPVNAGTVMTPDLLEAPNAIERGDHVIITARSGSFSVSSRGKALASAGVGE 208 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 + V+N+ + V V G V + Sbjct: 209 QVLVENLRSSRTVKARAVGPGRVEI 233 >gi|254488219|ref|ZP_05101424.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp. GAI101] gi|214045088|gb|EEB85726.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp. GAI101] Length = 123 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIP 83 + VVP+ + A ++ E M V N+ + ++DV+G R VL I Sbjct: 1 MAQVVVPTRTVRADAIITE-----MDVMIGNVSAADGFDRLRDVIGQEARVVLYAGRPIM 55 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 L + P ++ R V + + I+T G AL +GD I V N+ + + G V Sbjct: 56 LDQIGPPAIVDRNQIVSLFFEGRGLRIATEGRALERGGVGDNIRVMNLASRATLFGQVQQ 115 Query: 144 TGTVRV 149 GT+++ Sbjct: 116 DGTIQI 121 >gi|119775456|ref|YP_928196.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella amazonensis SB2B] gi|119767956|gb|ABM00527.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella amazonensis SB2B] Length = 235 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S+ A V+ VV + G++L+ ++ V + +RG ++ + G +R + Sbjct: 106 SVRAEVLFPVVVAKRPLGNGDLLDAESIEVRYVDKTLLRGQQFSHLQPLYGSRVKRRIPQ 165 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 D I L + +G V I + I T G AL+D + GD I +KNI++ ++ Sbjct: 166 DAPIFADNL---CFVCKGDAVTIYAKSASFEIKTQGEALADGNEGDRIRIKNINSDRVLE 222 Query: 139 GSVVDTGTVRV 149 +V+ G V V Sbjct: 223 ATVIGVGEVEV 233 >gi|332531614|ref|ZP_08407511.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624] gi|332038977|gb|EGI75406.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624] Length = 288 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVT----NSNI 56 M CV+ +S+ + + V+G A V + AG+ + + L+ +V NS + Sbjct: 144 MRCVQGATRWSVTL----PVQVQVMGSAWVLRANVPAGQAVTDQDLERREVDLAEDNSPV 199 Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 A G VT R L + ++ V + GA+VR+++ IS G A Sbjct: 200 LATDAWE-----GQVTSRGLRAGQTLRQNMFRAAKVFTSGAQVRVLVQGSGFQISAPGRA 254 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 LS +G + V+ ++ G +++ +VVD TVRV + Sbjct: 255 LSVGVVGQLAQVR-MENGRVMNATVVDARTVRVEI 288 >gi|154249530|ref|YP_001410355.1| flagellar basal body P-ring biosynthesis protein-like protein [Fervidobacterium nodosum Rt17-B1] gi|154153466|gb|ABS60698.1| Flagellar basal body P-ring biosynthesis protein-like protein [Fervidobacterium nodosum Rt17-B1] Length = 319 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 37/56 (66%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +I +G V+ I G + +ST AL + ++G VI+VKN++ GV++ G++ + GT+ Sbjct: 258 LIVKGQVVKAISIVGGVMVSTLVQALENGNVGKVISVKNLENGVIIKGTIQEDGTI 313 >gi|146278640|ref|YP_001168799.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides ATCC 17025] gi|145556881|gb|ABP71494.1| SAF domain [Rhodobacter sphaeroides ATCC 17025] Length = 139 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 4/137 (2%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 +VL L L + VV + I A EVL ++ + + G + +GL Sbjct: 3 WVLLLLCLASPAPADTVVATRTIRALEVLGPG---DLALRPETLPGTLTEPAQ-AIGLEA 58 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 R L + + + P +++R V + + G + I G AL+ +GDVI V N+ Sbjct: 59 RVTLYAGRPVGIGDVGPPGIVNRNQIVPLAYSLGALEIRAEGRALARGGVGDVIRVMNLS 118 Query: 133 TGVMVSGSVVDTGTVRV 149 + VSG + D G+V V Sbjct: 119 SRSTVSGRIADDGSVHV 135 >gi|222100098|ref|YP_002534666.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359] gi|221572488|gb|ACM23300.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359] Length = 287 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 58/116 (50%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E + + I G +++ +VVG+V++R L V+ ++L P + Sbjct: 168 INVGDVIKEDFVTVEERDIFEINGEPFYNVSEVVGMVSKRYLRSGTVLTKNMLEHPPDVV 227 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + G++ +ST L + +G+ + N+++ V G V +R++ Sbjct: 228 KGQIVPAYVDLGSIKVSTFVEILENGHLGETVKAMNVESRKYVFGRVEKGPVLRIL 283 >gi|313894969|ref|ZP_07828528.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 137 str. F0430] gi|312976422|gb|EFR41878.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 137 str. F0430] Length = 233 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 40/81 (49%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + D VI + L P VI G V +I + + G A+ IG I V Sbjct: 151 GRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRV 210 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 +N+ +G ++ G V+D TV++ Sbjct: 211 RNVRSGKILRGKVIDAETVQI 231 >gi|238799103|ref|ZP_04642559.1| Flagella basal body P-ring formation protein flgA [Yersinia mollaretii ATCC 43969] gi|238717050|gb|EEQ08910.1| Flagella basal body P-ring formation protein flgA [Yersinia mollaretii ATCC 43969] Length = 234 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R ++I G V+++ +++ G A+++A+I D + V Sbjct: 153 GSVSLRQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGDGFNVNSNGKAMNNAAIQDSVRV 212 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG V D GT+R+++ Sbjct: 213 R-MPSGQIVSGVVADDGTIRIML 234 >gi|320530442|ref|ZP_08031500.1| flagella basal body P-ring formation protein FlgA [Selenomonas artemidis F0399] gi|320137275|gb|EFW29199.1| flagella basal body P-ring formation protein FlgA [Selenomonas artemidis F0399] Length = 254 Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 40/81 (49%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + D VI + L P VI G V +I + + G A+ IG I V Sbjct: 172 GRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRV 231 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 +N+ +G ++ G V+D TV++ Sbjct: 232 RNVRSGKILRGKVIDGETVQI 252 >gi|42522135|ref|NP_967515.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100] gi|39574666|emb|CAE78508.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100] Length = 310 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + +I GE + L+ M +T+ + + ++D+ G + R L + S L R Sbjct: 191 VTTRLILQGERVQADDLR-MSMTDVTFAKDGSLRMEDIQGQMAARSLPVGSTVWASDLKR 249 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +G V+ +L + IS +A +GD+I VKN++T ++SG V + G V++ Sbjct: 250 EPAAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVLSGLVTEKGVVKL 309 >gi|289523331|ref|ZP_06440185.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503023|gb|EFD24187.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 305 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 33/57 (57%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y++ RG +VR+ + G +++ T AL ++GD+I V N+D+ +S V G V Sbjct: 242 YLVKRGDRVRLYVNSGMISVETVAKALDSGALGDIIRVINLDSRRTISAKVAGKGAV 298 >gi|78485818|ref|YP_391743.1| flageller protein FlgA [Thiomicrospira crunogena XCL-2] gi|78364104|gb|ABB42069.1| Flageller basal body P-ring formation protein FlgA [Thiomicrospira crunogena XCL-2] Length = 245 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 41/80 (51%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G+ +R L P+ ++ + L PY++ V II GN+ + + G AL D + Sbjct: 163 IGMRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVP 222 Query: 128 VKNIDTGVMVSGSVVDTGTV 147 V+N+ + ++ G V+ TV Sbjct: 223 VENLSSKKIIKGIVIAPNTV 242 >gi|318605238|emb|CBY26736.1| flagellar basal-body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica Y11] Length = 226 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 71/135 (52%), Gaps = 13/135 (9%) Query: 23 SVIGHAVVPSVVINAGE--VLNESRLKEMQV----TNSNIRGNYAHSIKDVVGLVTRRVL 76 V GH V + + AGE L + ++K+ ++ + + N+A G V+ R + Sbjct: 99 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQ------GAVSLRQI 152 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G + Sbjct: 153 NAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQI 211 Query: 137 VSGSVVDTGTVRVVV 151 V+G+V D GTV +++ Sbjct: 212 VNGTVADDGTVHILL 226 >gi|153831669|ref|ZP_01984336.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] gi|148872179|gb|EDL70996.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] Length = 265 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 ++ + I E ++ S LK T S + ++ +GL T R + +I + L Sbjct: 144 LIATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIRAGQIIDPTNLS 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P +I +G +V II ++ + ST G+AL G I V+N +G ++ Sbjct: 203 SPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251 >gi|85715051|ref|ZP_01046036.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A] gi|85698248|gb|EAQ36120.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A] Length = 362 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 45/92 (48%) Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 G A S VVG+ TRR + + + L RP ++ R V +I + ++ G A Sbjct: 235 GRDAASHDHVVGMQTRRQMRAGQALHGADLTRPDLVQRDEAVTLIYQAAGIYLTVRGKAT 294 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + GDV++V N+ + VSG VV G V V Sbjct: 295 EAGTEGDVVSVLNLQSKRTVSGVVVGRGQVSV 326 >gi|75675313|ref|YP_317734.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter winogradskyi Nb-255] gi|74420183|gb|ABA04382.1| flagellar protein FlgA [Nitrobacter winogradskyi Nb-255] Length = 380 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%) Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 GN S VVG+ TRR + + L RP ++ R V +I + ++ G A Sbjct: 252 GNNPASRDHVVGMQTRRQMRAGQALHGIDLTRPDLVQRDQAVTLIYQTAGIYLTVRGKAT 311 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + GDV++V N+ + +SG VV G V V Sbjct: 312 ESGTEGDVVSVLNLQSNRTISGVVVGRGQVSV 343 >gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus denitrificans BC] gi|317119096|gb|ADV01585.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans BC] Length = 248 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 G A V + + +GEVL+E+ E +V + + + VGL+ R L + Sbjct: 122 AFGPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAIVANPQAWVGLIATRPLAAGQALR 181 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 +++ P + G+ VR+++ ++++G A+S + G + V+ + G +V+G V++ Sbjct: 182 QNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAGAQGQNVRVR-MANGRIVAGIVLE 240 Query: 144 TGTVRVVV 151 GTV + Sbjct: 241 DGTVEAAL 248 >gi|304392505|ref|ZP_07374445.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp. R2A130] gi|303295135|gb|EFL89495.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp. R2A130] Length = 135 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVT-NSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 +VP I GE + S L+ ++V R + +D +G V LL I Sbjct: 10 QVLVPVRTIYPGETITASDLRLVEVAAGRERRQGVLRNWEDGIGRVATATLLARRYIVTR 69 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 L P+ + G VR+ + +TI T G AL ++G IAV++ Sbjct: 70 TLVVPHAVKVGEVVRVTFRRAGLTIETKGQALQSGAVGKAIAVRS 114 >gi|303328379|ref|ZP_07358817.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3] gi|302861709|gb|EFL84645.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3] Length = 417 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG + +I T+GN+ ++T AL+D G I V+N+ T + +V D TV + Sbjct: 359 MVRRGTILSLIYTRGNLRMTTQAEALADGEPGATIPVRNLQTKKQIYATVKDGSTVEI 416 >gi|260774932|ref|ZP_05883833.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] gi|260609187|gb|EEX35345.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] Length = 248 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +I V+G T++ L VI + + V+ R V I + MTI+T G AL+D S Sbjct: 163 NIDAVIGAKTKKNLRAGEVIESNDI---CVVCRNETVTIKAVKSGMTITTKGTALTDGSH 219 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+ I VKN + ++ G V V V+ Sbjct: 220 GEQIRVKNTKSNRIIEGRVTGISEVTVI 247 >gi|84502380|ref|ZP_01000516.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola batsensis HTCC2597] gi|84389192|gb|EAQ01989.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola batsensis HTCC2597] Length = 222 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP + GE + E L +++ + I D+VG+ +R+L + + + Sbjct: 101 VPVARMLPGERIGEEDLGAVKLPLARIGAFTVTDPADLVGMQVKRLLTQGRPVMTQSVIK 160 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P +I RG ++ I G + +S G AL A G I + N+ + ++G V G V V Sbjct: 161 PLIIDRGDRISIRYDDGLLALSAPGKALDAAHKGQEIRIVNLASNTSLTGVAVGRGIVEV 220 >gi|296534162|ref|ZP_06896655.1| flagella basal body P-ring formation protein FlgA [Roseomonas cervicalis ATCC 49957] gi|296265508|gb|EFH11640.1| flagella basal body P-ring formation protein FlgA [Roseomonas cervicalis ATCC 49957] Length = 107 Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 45/84 (53%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 V+G R L +PLS L + + R + V+++ ++++T+G AL D ++G I Sbjct: 3 VLGRRIGRPLGAGQPVPLSELSAQHAVRRDSVVQLVHEASGLSLTTSGRALEDGALGATI 62 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 + N+ G ++ G V+ G VR + Sbjct: 63 TILNLSNGAVLLGEVLAPGRVRAL 86 >gi|330826751|ref|YP_004390054.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans K601] gi|329312123|gb|AEB86538.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans K601] Length = 248 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 G A V + + +GEVL+E+ E +V + + + VGL+ R L + Sbjct: 122 AFGPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAIVANPQAWVGLIATRPLAAGQALR 181 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 +++ P + G+ VR+++ ++++G A+S + G + V+ + G +V+G V++ Sbjct: 182 QNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAGAQGQNVRVR-MANGRIVAGIVLE 240 Query: 144 TGTVRVVV 151 GTV + Sbjct: 241 DGTVEAAL 248 >gi|238782788|ref|ZP_04626817.1| Flagellar basal body P-ring biosynthesis protein [Yersinia bercovieri ATCC 43970] gi|238716211|gb|EEQ08194.1| Flagellar basal body P-ring biosynthesis protein [Yersinia bercovieri ATCC 43970] Length = 236 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 C F + V + + + H + P V I ++ ESR + + N Sbjct: 94 QCEGQRKFIQIAVYAQGTWWTP--SHPLKPGVTIQPEDL--ESRTGSLARLPEGVVFNKE 149 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 H ++GL T R + + + L +P VI G +V +I T I + G AL +A+ Sbjct: 150 H----IIGLTTTRSINRGQPVLQNQLRQPRVIMTGQEVEMIATGPGFRIRSRGKALDNAA 205 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 +G + + TG +++G+V G V + +K Sbjct: 206 LGGTLRIIT-KTGQIMTGTVTAEGKVNIDLK 235 >gi|238793994|ref|ZP_04637612.1| Flagella basal body P-ring formation protein flgA [Yersinia intermedia ATCC 29909] gi|238726626|gb|EEQ18162.1| Flagella basal body P-ring formation protein flgA [Yersinia intermedia ATCC 29909] Length = 226 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R +VI G +V+++ +++ G A+++A+I D + V Sbjct: 145 GAVSLRRINAGQPLTRNMLRRLWVIKAGQEVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 204 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V + GT+R+++ Sbjct: 205 R-MASGQIVSGTVGEDGTIRIML 226 >gi|68164554|gb|AAY87283.1| predicted flagellar basal body P-ring biosynthesis protein [uncultured bacterium BAC17H8] Length = 276 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +GL R+ L+ H+ P Y++ G +V I + G ++I+ G AL + I + I Sbjct: 197 MGLSARKPLMARHLYP------DYLVEEGNEVLITSSSGGISINMVGYALENGQISEWIG 250 Query: 128 VKNIDTGVMVSGSVVDTGTVRVVVK 152 V+N +G + + V V+ K Sbjct: 251 VENASSGKTIRAKITGEKKVTVIAK 275 >gi|95929875|ref|ZP_01312616.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684] gi|95134171|gb|EAT15829.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684] Length = 243 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 45/86 (52%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 +K+VVG + R + + + P ++ +G+ V+++ + M ++ GIAL D S G Sbjct: 156 LKNVVGKLVARNVRAGQPVEFKSVETPPLVHKGSFVKLVARRSGMMLTAIGIALEDGSKG 215 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 +VI V+N + +V VV V V Sbjct: 216 EVIRVQNNRSKKVVMAQVVGPDLVEV 241 >gi|54307266|ref|YP_128286.1| hypothetical protein PBPRA0029 [Photobacterium profundum SS9] gi|46911686|emb|CAG18484.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 253 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 44/94 (46%) Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115 +R Y S + + GL +RR ++ +I ++ +P ++ R V I G M + G+ Sbjct: 158 LRHGYFTSKQALTGLTSRRKIVAGKIISPRMVEQPKLVQRNDGVLIEAKFGKMNATMKGV 217 Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 AL GD I V+N+ + + +V VR Sbjct: 218 ALESGVKGDSIRVRNLSSQKEIYAIIVGPQKVRT 251 >gi|325982376|ref|YP_004294778.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp. AL212] gi|325531895|gb|ADZ26616.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp. AL212] Length = 249 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 +L PYVI RG V +++ I + G AL+DA+ G VI V+N +G +VSG Sbjct: 184 QMLRAPYVILRGQTVSLVVQGRGFNIQSEGQALADAADGQVIQVRN-KSGRIVSG 237 >gi|197120122|ref|YP_002140549.1| flagellar basal body P-ring formation protein FlgA [Geobacter bemidjiensis Bem] gi|197089482|gb|ACH40753.1| flagellar basal body P-ring formation protein FlgA [Geobacter bemidjiensis Bem] Length = 246 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GEVL S L + S RG Y + GL + + + + L Sbjct: 124 VVAARTLERGEVLLASDLSVAKRDLSLARGGYLKEPDEAAGLRVKATMRANTPVRKDNLE 183 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + V+ G V I+ + ++ +G A + GDVI V+N+ + ++ VVD TV+ Sbjct: 184 KVPVVKSGQMVTILAENDVVKVTASGRAKGAGAPGDVITVQNLSSQKEIAARVVDAATVK 243 Query: 149 V 149 V Sbjct: 244 V 244 >gi|87306344|ref|ZP_01088491.1| putative flagella basal body P-ring formation protein [Blastopirellula marina DSM 3645] gi|87290523|gb|EAQ82410.1| putative flagella basal body P-ring formation protein [Blastopirellula marina DSM 3645] Length = 287 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 H V P I GEV+ L + G++ I+ +VG R L I Sbjct: 142 HTVRP---IRRGEVIQAEDLTVQPLNTVRTDGDFETRIESLVGKEAIRSLPAQRPIESGS 198 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 + P VI + V +I G + I IA SDAS+GD++ V+ I Sbjct: 199 IREPVVIQQNDVVTVIAQIGGLVIRRDAIAASDASVGDLLMVQAI 243 >gi|292669969|ref|ZP_06603395.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas noxia ATCC 43541] gi|292648381|gb|EFF66353.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas noxia ATCC 43541] Length = 255 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + D VI +L P V+ G V ++ + + G+A+ IG I V Sbjct: 173 GRVAGRYIRRDTVITPPMLAMPLVVRAGNAVELVHNANGILVRAEGVAIESGRIGYTIRV 232 Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150 +N +G ++ G ++D TV+++ Sbjct: 233 RNARSGKIMRGRIIDAQTVQII 254 >gi|316932822|ref|YP_004107804.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris DX-1] gi|315600536|gb|ADU43071.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris DX-1] Length = 343 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 65/136 (47%), Gaps = 7/136 (5%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 +++++ A+V+ V + VI ++ E R K ++ A S +G+ R+ Sbjct: 202 AIETVVATVLTRPVQRNEVIKTSDIATERRPKSEVASD-------AASRDGAIGMQARQP 254 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L ++ + L +P +++R V +I + ++ G AL + GDV+ V N+ + Sbjct: 255 LRSGQILRNADLAKPDLVTRDQSVTLIYRTAGIYLTARGKALETGAEGDVVNVLNLQSKR 314 Query: 136 MVSGSVVDTGTVRVVV 151 ++G+V+ G V + Sbjct: 315 TIAGTVIGRGQVSITA 330 >gi|114330357|ref|YP_746579.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas eutropha C91] gi|114307371|gb|ABI58614.1| putative flagella basal body P-ring formation protein [Nitrosomonas eutropha C91] Length = 231 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 5/130 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LYV + A+VI HA P IN G++++ + +V I VVG Sbjct: 95 WTLYVPVEIEVIANVI-HAAQP---INMGKLVDTQDIVSKEVDLVRIPAGAVTDPDQVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V L I L PY+I+RG K+R+ T +ST G AL+ A+ G+V+ ++ Sbjct: 151 KVAVTFLASGQPIRTHQLRAPYIITRGQKIRLTATGAGFAVSTEGEALAAAAEGEVVQIR 210 Query: 130 NIDTGVMVSG 139 N TG ++SG Sbjct: 211 N-HTGRIMSG 219 >gi|123442788|ref|YP_001006765.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089749|emb|CAL12602.1| flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 200 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R ++I G V+++ +++ G A+++A+I D + V Sbjct: 119 GAVSLRPINAGQPLTRNMLRRLWIIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 178 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GTV +++ Sbjct: 179 R-MASGQIVSGTVADDGTVHILL 200 >gi|331645414|ref|ZP_08346518.1| SAF domain protein [Escherichia coli M605] gi|331045576|gb|EGI17702.1| SAF domain protein [Escherichia coli M605] Length = 252 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 40/85 (47%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 D +G ++ L P I L ++ R V I+ +T S G+AL + G++ Sbjct: 165 DAIGFSSKHALQPGRPITKEELISAVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEM 224 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+N + ++S V ++G V V Sbjct: 225 VKVRNASSQRVISAMVAESGVVTTV 249 >gi|269961593|ref|ZP_06175955.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833634|gb|EEZ87731.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 248 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%) Query: 28 AVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVI 82 A VP +V + GE+++ S + + R + ++ V+G + R V L D V Sbjct: 124 ASVPMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFSNMDQVIGSKLKRNVRLGDVVE 183 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 V V+ R KV I + MTI+T G AL D S GD + VKN + ++ G Sbjct: 184 RNDVC----VVCRNEKVTIKAVKSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEG 236 >gi|103488384|ref|YP_617945.1| flagellar protein [Sphingopyxis alaskensis RB2256] gi|98978461|gb|ABF54612.1| flagellar protein [Sphingopyxis alaskensis RB2256] Length = 170 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 32/58 (55%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ RG VR+ + N +IS A IA+ D +GD IA++ D +S +V G R+ Sbjct: 111 VVRRGDHVRVSIDTPNYSISYAAIAVEDGRVGDSIALRGSDRKSTLSATVTGPGAARI 168 >gi|220903672|ref|YP_002478984.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867971|gb|ACL48306.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 416 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG V +I ++GN+ I+T AL+D G I V+N+ T V G V + TV + Sbjct: 358 MVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEI 415 >gi|238755328|ref|ZP_04616671.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri ATCC 29473] gi|238706464|gb|EEP98838.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri ATCC 29473] gi|253317691|gb|ACT22780.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia ruckeri] Length = 219 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV---VGLVTRRVLLPD 79 V G +V + + AGE L E KEM + ++ D G + R + Sbjct: 92 QVSGKYLVATRQLAAGEKLTE---KEMTYKEGRLDTLPPGALLDARFAKGTLALRHINAG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + ++L R +V+ G V+++ +++ G A+++A++ D + V+ + +G +VSG Sbjct: 149 QPLTRTMLRRSWVVKAGQAVQVVAEGEGFNVNSEGKAMNNAALQDNVRVRMV-SGQIVSG 207 Query: 140 SVVDTGTVRVVV 151 +V D G +R+++ Sbjct: 208 TVGDDGVIRIML 219 >gi|212709488|ref|ZP_03317616.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM 30120] gi|212687826|gb|EEB47354.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM 30120] Length = 223 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G + R + S++ RP+ I G V + T N ++ G A+++A IG+ I V Sbjct: 141 GTLALRNITAGQTFTNSMVRRPWAIKAGQTVYVFATGDNFSVKYEGRAINNAVIGENIRV 200 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + I+ G +V+G + G+V V + Sbjct: 201 RLIN-GQVVNGEAQENGSVHVAL 222 >gi|114762165|ref|ZP_01441633.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca bermudensis HTCC2601] gi|114545189|gb|EAU48192.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. HTCC2601] Length = 138 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 ++DV+G R L P + + P ++ R V +I + + I T G AL A G Sbjct: 50 LEDVIGQEARVTLYPGRAVMRGAVGAPALVERNQIVELIFARNGLHIVTEGRALDRAGAG 109 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + V N+ + + G+V +GTV V+ Sbjct: 110 ERVRVMNLSSRSTLFGTVTASGTVSVL 136 >gi|113969600|ref|YP_733393.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. MR-4] gi|113884284|gb|ABI38336.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. MR-4] Length = 235 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 VV S + GE++N S+++ V +++RG + G+ V RRV H P+ Sbjct: 116 VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTNQISGVRVKRRVA--KH-FPIFAN 172 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +V + V I + N + T G AL D +IGD I VKN + + V G V Sbjct: 173 NLCFVC-KNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEV 231 Query: 148 RV 149 V Sbjct: 232 EV 233 >gi|255021350|ref|ZP_05293398.1| Flagellar basal-body P-ring formation protein flgA [Acidithiobacillus caldus ATCC 51756] gi|254969213|gb|EET26727.1| Flagellar basal-body P-ring formation protein flgA [Acidithiobacillus caldus ATCC 51756] Length = 226 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 51/115 (44%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + AG VL L M +++ G S+ + G R + I S+L P + Sbjct: 110 LTAGTVLTAGDLALMPGNAASLAGTPLSSLSEATGRTLRFGTVAGQPITQSMLAAPIWVH 169 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G V ++ + I+T A+ + G I V+N+ +G +V G+V TVRV Sbjct: 170 GGNNVTLVAEGDGVRITTLAQAIENGHPGQSILVRNLQSGRVVRGTVTAVATVRV 224 >gi|114046832|ref|YP_737382.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. MR-7] gi|113888274|gb|ABI42325.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. MR-7] Length = 235 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 VV S + GE++N S+++ V +++RG + G+ V RRV H P+ Sbjct: 116 VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTNQISGVRVKRRVA--KH-FPIFAN 172 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +V + V I + N + T G AL D +IGD I VKN + + V G V Sbjct: 173 NLCFVC-KNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEV 231 Query: 148 RV 149 V Sbjct: 232 EV 233 >gi|224825773|ref|ZP_03698877.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] gi|224601997|gb|EEG08176.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] Length = 240 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 42/86 (48%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 HS + VGL +R L + +L ++ RG V I+ ++ + ++ G +L Sbjct: 152 HSPAEAVGLSSRSALRRGQPLRRKLLEAVVLVRRGDAVEIVASKEAIVVTAPGESLESGR 211 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147 DVI V+N+ +G ++ V + G V Sbjct: 212 RNDVIRVRNVGSGKILRARVTEAGRV 237 >gi|91792658|ref|YP_562309.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella denitrificans OS217] gi|91714660|gb|ABE54586.1| Flageller protein FlgA [Shewanella denitrificans OS217] Length = 235 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV V++ G ++ L V ++RG + I+ ++G +R + D I L Sbjct: 116 VVADNVLSPGALITRDSLNIAFVDQYSLRGQFFTEIEQIIGSRVKRRVAKDAPILSGNL- 174 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + +G V I N+ I T+G AL+D + GD I VKN + + V G V Sbjct: 175 --CFVCKGDPVSIFARTENIVIKTSGEALNDGNEGDTIRVKNSISNRELDAQVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|149908763|ref|ZP_01897424.1| flagellar basal body P-ring biosynthesis protein [Moritella sp. PE36] gi|149808305|gb|EDM68244.1| flagellar basal body P-ring biosynthesis protein [Moritella sp. PE36] Length = 269 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 54/116 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN ++L + ++ + S + S + +V +R + +I S L + ++ Sbjct: 153 INPNQILKKQNIQLQRGVISRHTQRFITSSQQLVNQRAKRRIRSGKIILPSQLQQRLLVE 212 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 R +V I G+ +S G AL + +GD I +KN+ +G + ++ +G V + Sbjct: 213 RNDEVIIRAGSGSFVVSMKGKALQNGQLGDKIYIKNLSSGKKIQAKIIASGVVETL 268 >gi|260767775|ref|ZP_05876710.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260617284|gb|EEX42468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|315179393|gb|ADT86307.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio furnissii NCTC 11218] Length = 218 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ R V I M+I+T G ALSD ++GD I VKN + ++ G V G V V Sbjct: 159 VVCRNESVMIRAISAGMSITTKGTALSDGTLGDQIKVKNDKSNRIIDGKVSGIGEVTV 216 >gi|269965430|ref|ZP_06179549.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] gi|269829909|gb|EEZ84139.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] Length = 266 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + S VVG + R V L D V V Sbjct: 143 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVGAKLKRNVRLGDVVERNDVC 202 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I MTI+T G AL D S GD + VKN + ++ V D + Sbjct: 203 ----VVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVKNDKSQRIIEXIVTDIAEI 258 Query: 148 RV 149 V Sbjct: 259 TV 260 >gi|238751758|ref|ZP_04613246.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei ATCC 43380] gi|238710029|gb|EEQ02259.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei ATCC 43380] Length = 224 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R +VI G V+++ +++ G A+++A+I D + V Sbjct: 143 GAVSLRQINAGQPLTRNMLRRQWVIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRV 202 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG++ + G +R+++ Sbjct: 203 R-MASGQIVSGTLAEDGIIRIIL 224 >gi|34496454|ref|NP_900669.1| flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] gi|34102307|gb|AAQ58673.1| probable flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] Length = 221 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%) Query: 37 AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 AGE ++ ++ + ++N + GN VG V R + ++ PY++ Sbjct: 108 AGETISGGDVRLVDISNPALAGNVLTDASQAVGQVLRSGAPAGAWVRNFMVRAPYLVRSN 167 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +V++ + G AL +A+ GD I+V+ + TG +V G V G+V VV Sbjct: 168 QRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR-LSTGRVVLGVVQADGSVAVV 220 >gi|187478181|ref|YP_786205.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella avium 197N] gi|115422767|emb|CAJ49295.1| flagella basal body P-ring formation protein [Bordetella avium 197N] Length = 249 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V G V S I AG+ + L + N+ + +VG+ R + I Sbjct: 122 NVPGIYYVASRQIPAGQAITSEDLDSREGDLMNLPPGAMTDARSIVGMQARHRINIGQPI 181 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S L ISRG VRII +S+ G AL D + G I V+ +G +VSG + Sbjct: 182 RGSALRDAASISRGQNVRIIARGNGFVVSSEGQALEDGAPGATIQVRT-QSGQVVSGVLQ 240 Query: 143 DTGTVRV 149 G V + Sbjct: 241 PGGQVEL 247 >gi|148266115|ref|YP_001232821.1| SAF domain-containing protein [Geobacter uraniireducens Rf4] gi|146399615|gb|ABQ28248.1| SAF domain protein [Geobacter uraniireducens Rf4] Length = 238 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 54/112 (48%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GEV+ + + + ++G + ++ VG R + ++ I L + ++ G Sbjct: 125 GEVIGNGDIAVQKRDLAKMQGKTCRTAEEAVGKRVRTAIRGNNPIRADYLEKISLVKSGQ 184 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V I++ + I+ AG A + + GD + V+N+ + V+ VVD TV+V Sbjct: 185 LVTIVVENDALRITAAGRARNSGAEGDTVMVQNLASQKEVAARVVDATTVKV 236 >gi|119469944|ref|ZP_01612749.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Alteromonadales bacterium TW-7] gi|119446654|gb|EAW27927.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Alteromonadales bacterium TW-7] Length = 235 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 5/116 (4%) Query: 35 INAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 I GEV+ + + EM+ T+ +R Y K ++G ++R + +P+ +L++ ++ Sbjct: 122 IARGEVITSAHITVEMKPTHF-VRVQYQDDPKALIGSRSKRNIR--EGMPI-LLNQICMV 177 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +G + I + + I T G+AL D ++G+ I V+N TG +++ V +V+V Sbjct: 178 CKGDAINIYASTKGLQIKTTGVALEDGTLGEQILVENKKTGKVLNARVDGVESVQV 233 >gi|261253620|ref|ZP_05946193.1| flagellar basal-body P-ring formation protein FlgA [Vibrio orientalis CIP 102891] gi|260937011|gb|EEX93000.1| flagellar basal-body P-ring formation protein FlgA [Vibrio orientalis CIP 102891] Length = 248 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G V + I+ G++++E + V R SI V+G ++ L VI Sbjct: 126 GPQVTLTSPISRGQLISEYDVTISMVDLQRFRRQGFTSIDAVIGAKAKKNLRAGEVIEDR 185 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + V+ R V I + MTI+T G+AL+D S G+ I VKN + ++ G V Sbjct: 186 DI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVKNSKSNRIIEGRV 238 >gi|323495383|ref|ZP_08100460.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] gi|323310306|gb|EGA63493.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] Length = 248 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 V+ R V I + MTI+T G+AL+D S G+ I VKN + ++ G V V V+ Sbjct: 189 VVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVKNSKSNRIIEGRVTGISEVTVI 247 >gi|167576658|ref|ZP_02369532.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis TXDOH] Length = 253 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 158 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 217 Query: 126 IAVK 129 I V+ Sbjct: 218 IRVR 221 >gi|238788311|ref|ZP_04632105.1| Flagella basal body P-ring formation protein flgA [Yersinia frederiksenii ATCC 33641] gi|238723557|gb|EEQ15203.1| Flagella basal body P-ring formation protein flgA [Yersinia frederiksenii ATCC 33641] Length = 226 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R +VI G V+++ +++ G A+++ ++ D + V Sbjct: 145 GAVSLRQINAGQPLTRNMLRRLWVIKAGQDVQVLAQGEGFNVNSNGKAMNNGAVQDNVRV 204 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V + GT+R+++ Sbjct: 205 R-MASGQIVSGTVAEDGTIRIML 226 >gi|71280005|ref|YP_268215.1| putative flagellar basal-body P-ring formation protein FlgA [Colwellia psychrerythraea 34H] gi|71145745|gb|AAZ26218.1| putative flagellar basal-body P-ring formation protein FlgA [Colwellia psychrerythraea 34H] Length = 230 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I+ G+ L+ES ++ + + IRGN V G ++ + I + +I Sbjct: 117 ISKGDKLDESNVELAFIAINKIRGNKLTDTNIVFGAKAKKRIAKGRAISKRSI---CLIC 173 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 +G V II++ N +I T G+ALS +I + I VKN + +++ V Sbjct: 174 KGDVVTIIVSSDNFSIKTQGVALSSGNINEQIRVKNTRSKKVITPRV 220 >gi|309388847|gb|ADO76727.1| flagella basal body P-ring formation protein FlgA [Halanaerobium praevalens DSM 2228] Length = 323 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%) Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 V+ S L PYV+ G K+ + + N+ IST A IGD+I V+N+ TG Sbjct: 251 EVLNKSYLKIPYVVKWGQKLNLRVKVNNIKISTLVKAKERGKIGDIIKVENLRTGYDFQV 310 Query: 140 SVVDTGTVRVV 150 V+ V+++ Sbjct: 311 LVISPTEVKLI 321 >gi|260767919|ref|ZP_05876853.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260615949|gb|EEX41134.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] Length = 233 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 36/67 (53%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I + GL R L ++ +++ +P ++ +G +V II + + ST G+AL D G Sbjct: 146 IDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRG 205 Query: 124 DVIAVKN 130 D I V+N Sbjct: 206 DQIEVQN 212 >gi|90579902|ref|ZP_01235710.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] gi|90438787|gb|EAS63970.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] Length = 235 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVIPLSVL 87 VV SV + G V+ +L V + RGN +++G V R V L + + + Sbjct: 116 VVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIGSKVKRSVKLGEMIQARDIC 175 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ R V I G + I T G ALSD +IG+ I V+N + M+ + G V Sbjct: 176 ----LVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQNKTSRRMIDAIITAVGEV 231 Query: 148 RV 149 V Sbjct: 232 TV 233 >gi|254230144|ref|ZP_04923539.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|151937337|gb|EDN56200.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] Length = 262 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + + VVG + R V L D V V Sbjct: 143 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVGAKLKRNVRLGDVVERNDVC 202 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I MTI+T G AL D + GD + VKN + ++ G V TG Sbjct: 203 ----VVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVKNDKSQRIIEGIV--TGIA 256 Query: 148 RVVV 151 + V Sbjct: 257 EITV 260 >gi|92116935|ref|YP_576664.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter hamburgensis X14] gi|91799829|gb|ABE62204.1| flagellar protein FlgA [Nitrobacter hamburgensis X14] Length = 373 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%) Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 GN A + V+G+ RR + + + L +P ++ R V +I + ++ G A Sbjct: 239 GNDAANRDHVIGMQARRQMRAGQALRRADLTKPDLVQRDQAVTLIYQAAGIYLTVRGKAT 298 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + GDV++ N+ + VSG VV G V V Sbjct: 299 ESGTEGDVVSALNLQSKRTVSGVVVGRGQVSV 330 >gi|24374764|ref|NP_718807.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella oneidensis MR-1] gi|24349430|gb|AAN56251.1|AE015762_8 flagellar basal-body P-ring formation protein FlgA, putative [Shewanella oneidensis MR-1] Length = 235 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%) Query: 6 FLLFFSLYVLSLDSLFASVIG-HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 + +F S+ V D LF V+ + P GE+++ ++++ V +++RG I Sbjct: 101 WQIFISVRV---DILFPVVVATEPLAP------GELISPTQVEIRYVDQNSLRGMQFSDI 151 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + G+ +R + ++ P+ + +V A V I + N + T G AL D +IGD Sbjct: 152 NQLSGVRVKRRVAKNN--PIFANNLCFVCKNDA-VSIYVRSSNFVLKTVGEALQDGNIGD 208 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 I VKN + + +V G V V Sbjct: 209 QIRVKNSSSNKELDATVTAIGEVEV 233 >gi|83858807|ref|ZP_00952329.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii HTCC2633] gi|83853630|gb|EAP91482.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii HTCC2633] Length = 315 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 50/116 (43%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+ + + + +++ + +RG + +VG+ RR L D + + P V+ Sbjct: 189 IARGDTITAADVDWVRLPENQVRGEIILAETGLVGMTARRALTADRPVRSYDVEPPVVVE 248 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 RG V ++ G +T+S AL + G I N+ + V V G V+ Sbjct: 249 RGELVSLVYQVGPLTLSAQARALENGGEGQFIRFVNLQSNRTVEAWVEGPGRASVL 304 >gi|22126394|ref|NP_669817.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis KIM 10] gi|45441413|ref|NP_992952.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|162419453|ref|YP_001606469.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Angola] gi|165926043|ref|ZP_02221875.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165938691|ref|ZP_02227246.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|166010841|ref|ZP_02231739.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166210809|ref|ZP_02236844.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401018|ref|ZP_02306521.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420243|ref|ZP_02311996.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425844|ref|ZP_02317597.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469716|ref|ZP_02334420.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis FV-1] gi|270486649|ref|ZP_06203723.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|294504034|ref|YP_003568096.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis Z176003] gi|21959381|gb|AAM86068.1|AE013854_4 putative flagella basal body P-ring formation protein [Yersinia pestis KIM 10] gi|45436274|gb|AAS61829.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|162352268|gb|ABX86216.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Angola] gi|165913305|gb|EDR31927.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|165922247|gb|EDR39424.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165990185|gb|EDR42486.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166207989|gb|EDR52469.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|166961938|gb|EDR57959.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049407|gb|EDR60815.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055243|gb|EDR65040.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262361780|gb|ACY58501.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis D106004] gi|262366084|gb|ACY62641.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis D182038] gi|270335153|gb|EFA45930.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|294354493|gb|ADE64834.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis Z176003] Length = 254 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 173 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 232 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 233 R-MPSGQIVSGTVADDGTIRIML 254 >gi|259417444|ref|ZP_05741363.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp. TrichCH4B] gi|259346350|gb|EEW58164.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp. TrichCH4B] Length = 138 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 20 LFA-SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 LFA S + +VP I A E++ +++ N G + S +++G R L Sbjct: 11 LFAQSALADILVPVRTIRAKEIIAA---EDLVFKNVEAPGALS-SPNEIIGQEARVALYA 66 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 I + P ++ R V++I G + IST G +L + G++I V N+ + V+ Sbjct: 67 SRPIHAGDIGPPALVDRNDLVKLIFRHGGLEISTEGRSLGRGAEGELIRVMNLSSRTTVT 126 Query: 139 GSVVDTGTVRV 149 G + G + V Sbjct: 127 GRIRADGNIEV 137 >gi|89075488|ref|ZP_01161899.1| flagellar basal body P-ring biosynthesis protein [Photobacterium sp. SKA34] gi|89048760|gb|EAR54331.1| flagellar basal body P-ring biosynthesis protein [Photobacterium sp. SKA34] Length = 235 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRVLLPDHVIPLSVL 87 VV SV + G V+ +L V + RGN +++G V R V L + + + Sbjct: 116 VVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIGSKVKRSVKLGEMIQARDIC 175 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ R V I G + I T G ALSD +IG+ I V+N + M+ + G V Sbjct: 176 ----LVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQNRTSRRMIDAIITAVGEV 231 Query: 148 RV 149 V Sbjct: 232 TV 233 >gi|254504988|ref|ZP_05117139.1| SAF domain family [Labrenzia alexandrii DFL-11] gi|222441059|gb|EEE47738.1| SAF domain family [Labrenzia alexandrii DFL-11] Length = 326 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 39/80 (48%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 ++VG R L P + P ++ RG KV + G M +++ AL++ + GDV Sbjct: 228 NIVGKAARVNLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTNGAKGDV 287 Query: 126 IAVKNIDTGVMVSGSVVDTG 145 I V N+ + +V +V G Sbjct: 288 IDVMNLQSRRVVPATVTSRG 307 >gi|254508440|ref|ZP_05120560.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 16] gi|219548650|gb|EED25655.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 16] Length = 248 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 V+G T++ L VI + + V+ R V I + M I+T G+AL+D S G+ I Sbjct: 167 VIGAKTKKNLRSGEVIEENDI---CVVCRNETVTIKAVKSGMVITTKGVALTDGSHGEQI 223 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 VKN + ++ G V V VV Sbjct: 224 RVKNSKSNRIIEGRVTGISEVTVV 247 >gi|21113068|gb|AAM41243.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573877|gb|AAY49287.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 281 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 43/81 (53%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L P ++ RG V ++ G + + +G ALSDA + + Sbjct: 197 AVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 256 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 257 SVENSSSRRVVQGIVEASGTV 277 >gi|221639445|ref|YP_002525707.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides KD131] gi|221160226|gb|ACM01206.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides KD131] Length = 220 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 V L + +LP H+ P ++++RG V + + G + + AL D ++GD++ Sbjct: 140 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 193 Query: 128 VKNIDTGVMVSGSV 141 V+N+ +G ++ +V Sbjct: 194 VRNLSSGAILRATV 207 >gi|26991083|ref|NP_746508.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida KT2440] gi|24986118|gb|AAN69972.1|AE016635_8 flagella basal body P-ring formation protein FlgA [Pseudomonas putida KT2440] Length = 225 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 44/90 (48%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 + + VG+ R + D V+ L + V+ +G +V II G++++ G ALS Sbjct: 134 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 193 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + + I V+N+++ +V V G V V Sbjct: 194 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 223 >gi|148546700|ref|YP_001266802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida F1] gi|148510758|gb|ABQ77618.1| SAF domain protein [Pseudomonas putida F1] Length = 250 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 44/90 (48%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 + + VG+ R + D V+ L + V+ +G +V II G++++ G ALS Sbjct: 159 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 218 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + + I V+N+++ +V V G V V Sbjct: 219 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 248 >gi|313497755|gb|ADR59121.1| FlgA [Pseudomonas putida BIRD-1] Length = 240 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 44/90 (48%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 + + VG+ R + D V+ L + V+ +G +V II G++++ G ALS Sbjct: 149 FLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSK 208 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + + I V+N+++ +V V G V V Sbjct: 209 GGLSEQIRVRNLNSKRVVKARVTGPGQVEV 238 >gi|330445342|ref|ZP_08308994.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489533|dbj|GAA03491.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 235 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV +V + G VL +L + + RG+ ++++G +R + ++ + Sbjct: 116 VVAAVALGRGMVLTPDKLSVQMIESRFQRGSSFDDPREIIGSKVKRSVKAGEMVQARDI- 174 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 ++ R V I G + I T G ALSD +IGD I V+N + M+ + G V Sbjct: 175 --CLVCRNDSVIIRAGTGGLNIVTKGKALSDGAIGDEIRVQNTKSRRMIDAIITAVGEVT 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|108807169|ref|YP_651085.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Antiqua] gi|108812487|ref|YP_648254.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Nepal516] gi|145598614|ref|YP_001162690.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Pestoides F] gi|108776135|gb|ABG18654.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|108779082|gb|ABG13140.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Antiqua] gi|145210310|gb|ABP39717.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides F] Length = 251 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 170 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 229 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 230 R-MPSGQIVSGTVADDGTIRIML 251 >gi|186895110|ref|YP_001872222.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis PB1/+] gi|186698136|gb|ACC88765.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis PB1/+] Length = 259 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 178 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 237 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 238 R-MPSGQIVSGTVADDGTIRIML 259 >gi|149366255|ref|ZP_01888290.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CA88-4125] gi|218928918|ref|YP_002346793.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis CO92] gi|229896238|ref|ZP_04511408.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides A] gi|229897173|ref|ZP_04512329.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897899|ref|ZP_04513050.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. India 195] gi|229902869|ref|ZP_04517986.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|115347529|emb|CAL20438.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CO92] gi|149292668|gb|EDM42742.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CA88-4125] gi|229680316|gb|EEO76415.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|229688940|gb|EEO81005.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. India 195] gi|229693510|gb|EEO83559.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701161|gb|EEO89190.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides A] gi|320015471|gb|ADV99042.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 232 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232 >gi|323492342|ref|ZP_08097495.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] gi|323313389|gb|EGA66500.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] Length = 216 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L TRR+ +I L P ++++G +V I +G + +T G+AL + G I V+ Sbjct: 136 LATRRIR-SGQIIDGRKLQTPALVAKGNQVIISAGKGGFSATTKGVALEQGAHGQQIEVR 194 Query: 130 NIDTGVMV 137 NI +G +V Sbjct: 195 NISSGKVV 202 >gi|170024651|ref|YP_001721156.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis YPIII] gi|169751185|gb|ACA68703.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis YPIII] Length = 269 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 188 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 247 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 248 R-MPSGQIVSGTVADDGTIRIML 269 >gi|167034950|ref|YP_001670181.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida GB-1] gi|166861438|gb|ABY99845.1| flagella basal body P-ring formation protein FlgA [Pseudomonas putida GB-1] Length = 250 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 44/91 (48%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 + + VG+ R + D V+ L + V+ +G +V II G++++ G ALS Sbjct: 158 GFLTELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALS 217 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + + I V+N+++ +V V G V V Sbjct: 218 KGGLSEQIRVRNLNSKRVVKARVTGPGQVEV 248 >gi|77359715|ref|YP_339290.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas haloplanktis TAC125] gi|76874626|emb|CAI85847.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas haloplanktis TAC125] Length = 235 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV +V + GEV+ + L EM+ T+ IR Y + ++G ++R + +PL +L Sbjct: 116 VVANVNLARGEVITAAHLSIEMRSTHF-IRVQYLDNPALLIGSRSKRNIRSG--MPL-LL 171 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + ++ +G V I + + T GIAL D S+G+ + VKN TG +++ V +V Sbjct: 172 SQICMVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVKNKKTGKVLNARVDGVESV 231 Query: 148 RV 149 +V Sbjct: 232 QV 233 >gi|242278485|ref|YP_002990614.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio salexigens DSM 2638] gi|242121379|gb|ACS79075.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio salexigens DSM 2638] Length = 334 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 VI+RG KV ++ N+ ++ AL DA +G I V+N+ + V +VV+ TV+V Sbjct: 276 VIARGDKVTLMFRGKNLKLTVPVEALEDAGVGQNITVRNLQSKRKVVATVVNAQTVQV 333 >gi|332533181|ref|ZP_08409050.1| flagellar basal-body P-ring formation protein FlgA [Pseudoalteromonas haloplanktis ANT/505] gi|332037463|gb|EGI73917.1| flagellar basal-body P-ring formation protein FlgA [Pseudoalteromonas haloplanktis ANT/505] Length = 235 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + + GEV+ +S L EM+ T+ +R Y ++G ++R + +P+ +L Sbjct: 116 VVATANLTRGEVITKSHLSIEMKPTHF-VRIQYLDDPTMLIGSRSKRNIRSG--MPV-LL 171 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ ++ +G V I + I T GIAL D ++G+ I +KN +G +++ V +V Sbjct: 172 NQICMVCKGDSVNIYANLRGLRIKTTGIALEDGTLGEQIQIKNKKSGKVLNARVDGVESV 231 Query: 148 RV 149 +V Sbjct: 232 QV 233 >gi|262394945|ref|YP_003286799.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] gi|262338539|gb|ACY52334.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] Length = 248 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 +V + + GE+++ S + + R + + VVG + R V L D V V Sbjct: 129 IVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVGAKLKRNVRLGDVVERNDVC 188 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 V+ R KV I MTI+T G AL D + GD + VKN + ++ G V TG Sbjct: 189 ----VVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVKNDKSQRIIEGIV--TGIA 242 Query: 148 RVVV 151 + V Sbjct: 243 EITV 246 >gi|51596007|ref|YP_070198.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 32953] gi|51589289|emb|CAH20910.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 32953] Length = 232 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232 >gi|152995098|ref|YP_001339933.1| flagellar basal body P-ring biosynthesis protein-like protein [Marinomonas sp. MWYL1] gi|150836022|gb|ABR69998.1| Flagellar basal body P-ring biosynthesis protein-like protein [Marinomonas sp. MWYL1] Length = 230 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 52/108 (48%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+ +++S +V S++RG+ GL+ R L + I + ++P ++ Sbjct: 114 INRGQAISKSNTDVGEVDISSLRGHVYTKKNPPYGLIASRNLRINTFITDDLTNQPTLVK 173 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +G V I + G + + G+AL + G I VKN + ++ VV Sbjct: 174 KGDSVLITASSGTIIVRMNGVALENGIKGQQIRVKNTSSERIIYAKVV 221 >gi|325274808|ref|ZP_08140835.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas sp. TJI-51] gi|324100053|gb|EGB97872.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas sp. TJI-51] Length = 240 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 44/91 (48%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 + + VG+ R + D V+ L + V+ +G +V I+ G++++ G ALS Sbjct: 148 GFLSELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIVARSGSLSVRMPGEALS 207 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + + I V+N+++ +V V G V V Sbjct: 208 KGGLSEQIRVRNLNSKRVVKARVTGPGQVEV 238 >gi|83717277|ref|YP_438385.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] gi|83651102|gb|ABC35166.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] Length = 257 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 162 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDV 221 Query: 126 IAVK 129 I ++ Sbjct: 222 IRLR 225 >gi|153947896|ref|YP_001401294.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 31758] gi|152959391|gb|ABS46852.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 31758] Length = 232 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V++R + + ++L R +++ G V ++ +++ G A+++ + + I V Sbjct: 151 GAVSQRQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRV 210 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D GT+R+++ Sbjct: 211 R-MPSGQIVSGTVADDGTIRIML 232 >gi|77747859|ref|NP_637319.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761201|ref|YP_243307.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. 8004] gi|188991646|ref|YP_001903656.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. B100] gi|167733406|emb|CAP51607.1| Flagella basal body P-ring formation protein flgA precursor [Xanthomonas campestris pv. campestris] Length = 214 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 43/81 (53%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L P ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|218778845|ref|YP_002430163.1| flagella basal body P-ring formation protein FlgA [Desulfatibacillum alkenivorans AK-01] gi|218760229|gb|ACL02695.1| Flagella basal body P-ring formation protein FlgA [Desulfatibacillum alkenivorans AK-01] Length = 324 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 16/123 (13%) Query: 34 VINAG----EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V+ AG E+ N SRL + VT+ K+V G+ R+ + + +L + Sbjct: 213 VLTAGDVTVEMRNLSRLPDGVVTDP----------KEVRGMRLRQDMDAGEHMLSRMLEK 262 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P ++ RG V I+ G ++I+ G+A +GD I V+N + +++ V TG +V Sbjct: 263 PPLVERGEDVTIMAENGVLSITAIGLAKESGGLGDAIEVENKMSEKIITCRV--TGPAQV 320 Query: 150 VVK 152 V+ Sbjct: 321 EVR 323 >gi|218887605|ref|YP_002436926.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758559|gb|ACL09458.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 346 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 12/134 (8%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH---SIKDVVGLVTR-- 73 S F V + +N +VL ++ + +R N A+ D +G R Sbjct: 217 SAFVDVWADVPCAAQPVNKDDVLTPEKI-------TRVRKNLAYLREPAWDGLGGPWRLT 269 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 R + D VI S L + RG+ V ++ G++ + G A++D +G+ I V+N+ + Sbjct: 270 RPVGADQVIYQSDLSGVPTVRRGSVVTVLYDSGSVRLQVQGEAMADGGLGETIPVRNMQS 329 Query: 134 GVMVSGSVVDTGTV 147 + +V D GTV Sbjct: 330 KRQIYAAVKDGGTV 343 >gi|116626489|ref|YP_828645.1| SAF domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229651|gb|ABJ88360.1| SAF domain [Candidatus Solibacter usitatus Ellin6076] Length = 285 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 11/126 (8%) Query: 29 VVPSVVINAGEVLNESRLK-----EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + AG ++ +RL+ E+ T Y +I++ G V RR + + Sbjct: 161 VVATEALQAGRPIDPARLRVESREELPATG------YLAAIEETAGKVPRRSIAAGTPLR 214 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 L V+ G V++ + G + G+A++ ++GD + V N D+ V Sbjct: 215 AQWLEAARVVMSGDTVQVEIINGGAHLVLDGVAVTSGAVGDTVLVLNPDSKKQFRARVTA 274 Query: 144 TGTVRV 149 G VRV Sbjct: 275 AGKVRV 280 >gi|167614833|ref|ZP_02383468.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis Bt4] gi|257141418|ref|ZP_05589680.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] Length = 248 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 153 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDV 212 Query: 126 IAVK 129 I ++ Sbjct: 213 IRLR 216 >gi|170722898|ref|YP_001750586.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida W619] gi|169760901|gb|ACA74217.1| flagella basal body P-ring formation protein FlgA [Pseudomonas putida W619] Length = 250 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 + + VG+ R + D V+ L + VI +G V II G++ + G ALS Sbjct: 159 FLTDLDQAVGMKMLRPTVIDQVLTPQHLEQAEVIRKGDHVVIIARSGSLAVRMPGEALSK 218 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+ I V+N+++ +V V G V V + Sbjct: 219 GGQGEQIRVRNLNSQRVVKARVTAPGQVEVAM 250 >gi|77463603|ref|YP_353107.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|77388021|gb|ABA79206.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] Length = 222 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 V L + +LP H+ P ++++RG V + + G + + AL D ++GD++ Sbjct: 142 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 195 Query: 128 VKNIDTGVMVSGSV 141 V+N+ +G + +V Sbjct: 196 VRNLSSGATLRATV 209 >gi|56551515|ref|YP_162354.1| hypothetical protein ZMO0619 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761159|ref|ZP_04759248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|4378864|gb|AAD19732.1| flagellar protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543089|gb|AAV89243.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374778|gb|EER64239.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 188 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG V ++ + T+S GIA D ++GD I VK+ + V VV++G VR+ Sbjct: 127 LVKRGDPVELVAGNNSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184 >gi|126462435|ref|YP_001043549.1| SAF domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104099|gb|ABN76777.1| SAF domain [Rhodobacter sphaeroides ATCC 17029] Length = 220 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 V L + +LP H+ P ++++RG V + + G + + AL D ++GD++ Sbjct: 140 VALAPGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 193 Query: 128 VKNIDTGVMVSGSV 141 V+N+ +G + +V Sbjct: 194 VRNLSSGATLRATV 207 >gi|332558459|ref|ZP_08412781.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332276171|gb|EGJ21486.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 222 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 V L + +LP H+ P ++++RG V + + G + + AL D ++GD++ Sbjct: 142 VALAAGQPVLPRHLEPD------WLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVE 195 Query: 128 VKNIDTGVMVSGSV 141 V+N+ +G + +V Sbjct: 196 VRNLSSGATLRATV 209 >gi|260752880|ref|YP_003225773.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552243|gb|ACV75189.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 188 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG V ++ + T+S GIA D ++GD I VK+ + V VV++G VR+ Sbjct: 127 LVKRGDPVELVAGNSSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184 >gi|167905086|ref|ZP_02492291.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei NCTC 13177] Length = 233 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197 Query: 126 IAVK 129 I ++ Sbjct: 198 IRLR 201 >gi|114570498|ref|YP_757178.1| flagellar basal body P-ring biosynthesis protein FlgA [Maricaulis maris MCS10] gi|114340960|gb|ABI66240.1| flagellar protein FlgA [Maricaulis maris MCS10] Length = 314 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 53/115 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + +G+ + S + + + +R + + ++G+ TRR L P+ + L RP ++ Sbjct: 192 VASGQEITASDITWISHRSDRLRPDAILDPEALIGMETRRALRPNEPLRGYDLQRPLMVE 251 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 RG V ++ + ++ A+ DA+ G+V N+ + V V G RV Sbjct: 252 RGDLVVLMFEVPGIQLTVRARAMEDAADGEVARFINLQSNRTVEALVDGPGRARV 306 >gi|254459586|ref|ZP_05073002.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium HTCC2083] gi|206676175|gb|EDZ40662.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae bacterium HTCC2083] Length = 245 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AV + +N G+ L S ++ + + YA S VVG V + L P + Sbjct: 118 EAVYLKLPMNKGDRLKLSDVELRPIERLSSESVYA-SPDQVVGRVLGQSLTPSIAVMPRH 176 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L R + + + I + +G + + + G+AL +GD I V+N+ + ++ G ++ Sbjct: 177 LAREWSVQEEDILSIYIVRGGIEVVSTGVALQPGQLGDTIHVENLSSETVLIGRIIGEKK 236 Query: 147 VRVVVK 152 V ++ K Sbjct: 237 VEIIAK 242 >gi|134280881|ref|ZP_01767591.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] gi|134247903|gb|EBA47987.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] Length = 233 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197 Query: 126 IAVK 129 I ++ Sbjct: 198 IRLR 201 >gi|254299690|ref|ZP_04967139.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] gi|157809683|gb|EDO86853.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] Length = 233 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + + DV Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDV 197 Query: 126 IAVK 129 I ++ Sbjct: 198 IRLR 201 >gi|170742324|ref|YP_001770979.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] gi|168196598|gb|ACA18545.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] Length = 347 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VG V +R L P + + L RP ++ RG V I+ ++++ G+A +G + Sbjct: 248 LVGQVAQRALAPGQPLRSADLARPDLVQRGEAVTILYEGPGVSLALGGLAREGGPLGATV 307 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 +V N + ++ G+VV G V V Sbjct: 308 SVVNPVSKKVLQGTVVGPGRVSV 330 >gi|269103194|ref|ZP_06155891.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163092|gb|EEZ41588.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium damselae subsp. damselae CIP 102761] Length = 231 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIPLSVL 87 VV SV + G VL+++ L + + RG S + + G V R V + + V + Sbjct: 112 VVASVPLGRGMVLSQNNLTVALIESRFQRGAIYQSPQALFGAKVKRNVKIGEAVQANDIC 171 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++ R KV I Q + I T G ALSD ++G+ I VKN + ++S V G V Sbjct: 172 ----MVCRNDKVVISAGQPGLKIITQGTALSDGTLGEQIRVKNNRSNKIISAQVSAVGEV 227 Query: 148 RV 149 V Sbjct: 228 DV 229 >gi|323498426|ref|ZP_08103422.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio sinaloensis DSM 21326] gi|323316499|gb|EGA69514.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio sinaloensis DSM 21326] Length = 248 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +I V+G T++ L +I + + V+ R V I + M I+T G+A++D S Sbjct: 163 TIDAVIGAKTKKNLRSGEIIEENDI---CVVCRNETVTIKAVKSGMVITTKGVAMTDGSH 219 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+ I VKN + ++ G V V VV Sbjct: 220 GEQIRVKNSKSNRIIEGRVTGISEVTVV 247 >gi|254470124|ref|ZP_05083528.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062] gi|211960435|gb|EEA95631.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062] Length = 322 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 46/96 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ G ++ + +++ + S G + D++G+ RR + I + P ++ Sbjct: 194 LDRGAIITANDVRQERKPASRYAGREFLAAADLIGMEVRRNMRSGSTITPRDVSTPVLVK 253 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 RGAKV ++ M IST G A S+ D+I + N Sbjct: 254 RGAKVTVLYKIPGMNISTQGKAKSEGGKNDLIEILN 289 >gi|149189832|ref|ZP_01868112.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] gi|148836318|gb|EDL53275.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] Length = 240 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 36/72 (50%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 ++ + ++G R + +I S + +P ++ +G +V II +G ST GIAL Sbjct: 148 HFVADLSQIIGNQVSRRMRTGQIIDASFVVKPPLVEKGNEVVIIAAKGKFNASTKGIALE 207 Query: 119 DASIGDVIAVKN 130 G+ I V+N Sbjct: 208 TGGAGEQIEVQN 219 >gi|170288993|ref|YP_001739231.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp. RQ2] gi|170176496|gb|ACB09548.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp. RQ2] Length = 286 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 51/107 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E ++ + I G + +VVG ++RR L V+ ++ P + Sbjct: 167 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRV 273 >gi|194365685|ref|YP_002028295.1| flagellar basal body P-ring biosynthesis protein FlgA [Stenotrophomonas maltophilia R551-3] gi|194348489|gb|ACF51612.1| flagella basal body P-ring formation protein FlgA [Stenotrophomonas maltophilia R551-3] Length = 218 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I GE L + + Q + I G +G + RR L ++ + L +I Sbjct: 102 IGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RG V ++ +G++ + AG A+ DA + ++V+N+ + +V G+V G V Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214 >gi|298529925|ref|ZP_07017327.1| flagella basal body P-ring formation protein FlgA [Desulfonatronospira thiodismutans ASO3-1] gi|298509299|gb|EFI33203.1| flagella basal body P-ring formation protein FlgA [Desulfonatronospira thiodismutans ASO3-1] Length = 327 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++SRGAKV ++ ++T+ G L D GD I V+N+ + V +V +G V Sbjct: 269 MVSRGAKVDMVYEGNHLTLVVPGEVLEDGQRGDRIMVRNMQSEKEVRATVESSGRV 324 >gi|148270381|ref|YP_001244841.1| SAF domain-containing protein [Thermotoga petrophila RKU-1] gi|147735925|gb|ABQ47265.1| SAF domain [Thermotoga petrophila RKU-1] Length = 280 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 55/116 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E ++ + I G + +VVG ++RR L V+ ++ P + Sbjct: 161 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 220 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + G++ ++T L + +G+ + N+++ V G V +R++ Sbjct: 221 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 276 >gi|15644289|ref|NP_229341.1| flagellar protein FlgA, putative [Thermotoga maritima MSB8] gi|4982108|gb|AAD36608.1|AE001800_18 flagellar protein FlgA, putative [Thermotoga maritima MSB8] Length = 286 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 55/116 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E ++ + I G + +VVG ++RR L V+ ++ P + Sbjct: 167 INVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + G++ ++T L + +G+ + N+++ V G V +R++ Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 282 >gi|238785501|ref|ZP_04629484.1| Flagella basal body P-ring formation protein flgA [Yersinia bercovieri ATCC 43970] gi|238713603|gb|EEQ05632.1| Flagella basal body P-ring formation protein flgA [Yersinia bercovieri ATCC 43970] Length = 234 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R ++I G V+++ +++ G A+++A+I D + V Sbjct: 153 GAVSLRQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGEGFNVNSYGKAMNNAAIQDNLRV 212 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG V + GT+R+++ Sbjct: 213 R-MASGQIVSGVVGEDGTIRIML 234 >gi|281412687|ref|YP_003346766.1| flagella basal body P-ring formation protein FlgA [Thermotoga naphthophila RKU-10] gi|281373790|gb|ADA67352.1| flagella basal body P-ring formation protein FlgA [Thermotoga naphthophila RKU-10] Length = 286 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 55/116 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E ++ + I G + +VVG ++RR L V+ ++ P + Sbjct: 167 INVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 226 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + G++ ++T L + +G+ + N+++ V G V +R++ Sbjct: 227 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 282 >gi|237745828|ref|ZP_04576308.1| molybdopterin synthase subunit MoaD [Oxalobacter formigenes HOxBLS] gi|229377179|gb|EEO27270.1| molybdopterin synthase subunit MoaD [Oxalobacter formigenes HOxBLS] Length = 85 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107 IR Y SI++ VG+ ++LPD V L L R Y++ RG R L +GN Sbjct: 2 KIRVRYFASIREAVGISEESIILPDRVKTLDDL-RGYLMDRGTIWREALAEGN 53 >gi|254438146|ref|ZP_05051640.1| SAF domain family [Octadecabacter antarcticus 307] gi|198253592|gb|EDY77906.1| SAF domain family [Octadecabacter antarcticus 307] Length = 224 Score = 37.4 bits (85), Expect = 0.78, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 ++++DVVG V + L P + L R + + G V + + +G I T G+AL Sbjct: 135 NALEDVVGRVLVQSLSPRVPVMPRHLERDWAVDLGDVVSLRVVRGGTEIETFGVALESGQ 194 Query: 122 IGDVIAVKNIDTG 134 IGD I ++N +G Sbjct: 195 IGDKIRIENRSSG 207 >gi|260222463|emb|CBA32052.1| hypothetical protein Csp_D30190 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 245 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 1/126 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 +G A V +N+G ++ES + +V + + +G R L + Sbjct: 119 AMGEAWVVRNQVNSGANISESDVTRGEVDWAEEQSPVLADKTAWLGQTASRTLTTGQAMR 178 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 ++ V GA V+I+ IS+ ALS IG V+ +D G + SG+V+D Sbjct: 179 QGMVRPAQVFQAGASVKIVAQGPGFQISSEAQALSAGVIGQQARVR-MDNGRVASGTVLD 237 Query: 144 TGTVRV 149 TV++ Sbjct: 238 MRTVKI 243 >gi|222447129|pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From Thermotoga Maritima Msb8 Length = 278 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 55/116 (47%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN G+V+ E ++ + I G + +VVG ++RR L V+ ++ P + Sbjct: 152 INVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVV 211 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + G++ ++T L + +G+ + N+++ V G V +R++ Sbjct: 212 KGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 267 >gi|149911708|ref|ZP_01900316.1| flagella basal body P ring formation protein FlgA [Moritella sp. PE36] gi|149805238|gb|EDM65255.1| flagella basal body P ring formation protein FlgA [Moritella sp. PE36] Length = 233 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 36/58 (62%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ +G V + + GN+T+ T G+AL++ +G+ I V+N + +VSG V G +++ Sbjct: 174 LVCKGENVTLTSSVGNLTVKTDGMALANGILGEKIKVRNSKSKRIVSGIVQAAGIIQI 231 >gi|121607565|ref|YP_995372.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552205|gb|ABM56354.1| SAF domain [Verminephrobacter eiseniae EF01-2] Length = 281 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R L V+ +++ P++ GA+V++ + + AG ALS + G ++ V Sbjct: 200 GQVAARPLRAGQVLRQTMVRAPWLFPAGAQVKVQVLGPGYAVVAAGQALSAGATGQMVRV 259 Query: 129 KNIDTGVMVSGSVVDTGTV 147 + +D G +VSG V GT+ Sbjct: 260 R-MDNGRIVSGMVNAAGTI 277 >gi|254477189|ref|ZP_05090575.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp. R11] gi|214031432|gb|EEB72267.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp. R11] Length = 138 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +VP I A E++ +++ + ++++ G + +V+G R L + + Sbjct: 21 LVPVRTIRAKEIVTA---EDLALKSADVLGALSDP-SEVIGKEARVALYAGRPVRAGDVG 76 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++ R V I T+G +TI G +L + G+ I V N+ + V+G + GTV Sbjct: 77 PPAIVERNDLVTIRFTRGGLTIMAEGRSLGRGADGEAIRVMNLSSRTTVTGRIASDGTVE 136 Query: 149 V 149 V Sbjct: 137 V 137 >gi|294339847|emb|CAZ88210.1| putative Flagella basal body P-ring formation protein flgA [Thiomonas sp. 3As] Length = 244 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 55/118 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + AG VL + L ++ + + + +VG V R + + S+L P ++ Sbjct: 127 LQAGHVLTAADLTMVERDATRLPPGAVTDAQALVGQVLRYSVAAGQPLAQSMLTGPQLVH 186 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 G V +I + + G A++D +G + V+N+ +G +VSG V G V V ++ Sbjct: 187 YGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVRNVQSGRVVSGIVDAQGQVVVPLQ 244 >gi|119384848|ref|YP_915904.1| flagellar basal body P-ring biosynthesis protein FlgA [Paracoccus denitrificans PD1222] gi|119374615|gb|ABL70208.1| SAF domain [Paracoccus denitrificans PD1222] Length = 138 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 38/86 (44%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 I VVG R ++ I S L P ++ R V I + + I G ALS S Sbjct: 48 EDIAQVVGQQLRVMVYQGRRIDPSTLTAPTLVGRNQIVTIAYEKATLRIEAEGRALSAGS 107 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147 G +I V N + V VSG V GTV Sbjct: 108 AGQIIRVMNNASRVTVSGRVAPDGTV 133 >gi|167725926|ref|ZP_02409162.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei DM98] Length = 233 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 32/64 (50%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + +G +RR L V+ +L P +I RG VRI+ G I GIA+ + DV Sbjct: 138 EAIGRTSRRSLHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQSGAQDDV 197 Query: 126 IAVK 129 I ++ Sbjct: 198 IRLR 201 >gi|271500062|ref|YP_003333087.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech586] gi|270343617|gb|ACZ76382.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech586] Length = 222 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 +DV G V R + P I ++ +P+VI G V+I+ ++ + G A+++A+ G Sbjct: 137 EDVQGAVALRDIAPGQAITQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQ 196 Query: 125 VIAVKNIDTGVMVSG 139 + +G +VSG Sbjct: 197 QARARTA-SGQVVSG 210 >gi|127512273|ref|YP_001093470.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella loihica PV-4] gi|126637568|gb|ABO23211.1| SAF domain protein [Shewanella loihica PV-4] Length = 235 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 7/135 (5%) Query: 19 SLFASVIGHAVVPSVVIN----AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 ++ SV + P VV N G+++ +++ V S +RG V G +R Sbjct: 102 QIYISVRVEVLFPVVVANQTLGPGDLIESDQIRLDYVEQSQLRGQQFDDPVAVTGTRVKR 161 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 + + + S L + +G V I N I T G AL D ++GD I V+N + Sbjct: 162 RIPANQPLFASNL---CFVCKGDIVAIYARADNFVIKTNGEALKDGNLGDKIQVRNSRSN 218 Query: 135 VMVSGSVVDTGTVRV 149 V V G V V Sbjct: 219 KTVDAHVTGIGEVEV 233 >gi|114765243|ref|ZP_01444375.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca bermudensis HTCC2601] gi|114542378|gb|EAU45406.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. HTCC2601] Length = 220 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G+ RR+L + + P VI RG KV I+ G + ++ G AL+DA G + + Sbjct: 138 GMQVRRMLAQGRPVMRQSVMEPLVIGRGDKVNILYDDGRLVVTAPGRALTDAHRGQDVRI 197 Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150 N+ + ++ + G V V+ Sbjct: 198 VNLVSNNALTAVAREEGLVEVI 219 >gi|238764388|ref|ZP_04625338.1| Flagella basal body P-ring formation protein flgA [Yersinia kristensenii ATCC 33638] gi|238697414|gb|EEP90181.1| Flagella basal body P-ring formation protein flgA [Yersinia kristensenii ATCC 33638] Length = 233 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V+ R + + ++L R +V+ G V+++ ++ +G A+++A++ D + V Sbjct: 152 GAVSLRQINAGQPLTRNMLRRLWVVKAGQYVQVLAQGDGFNVNGSGKAMNNAAVQDNVRV 211 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + + +G +VSG+V D G +++++ Sbjct: 212 R-MASGQIVSGTVSDDGIIKIIL 233 >gi|39936962|ref|NP_949238.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris CGA009] gi|39650819|emb|CAE29342.1| Flageller protein FlgA [Rhodopseudomonas palustris CGA009] Length = 342 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 44/84 (52%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G+ R+ L V+ + L +P +++R V +I + ++ G AL + GDV+ Sbjct: 247 IGMQARQTLRSGQVLRSADLAKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVN 306 Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151 V N+ + ++G+V+ G V + V Sbjct: 307 VLNLQSKRTITGTVIGRGQVAITV 330 >gi|146307875|ref|YP_001188340.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina ymp] gi|145576076|gb|ABP85608.1| SAF domain protein [Pseudomonas mendocina ymp] Length = 252 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 42/92 (45%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y +G R L D +I + L VI RG +V I + G + + G AL+D Sbjct: 161 YLTDPTQAIGKKLTRQLNSDQIITPAHLQVAEVIRRGDQVVISASGGTVNVRMPGEALTD 220 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + G I V+N+ + ++ VV G V V + Sbjct: 221 GAPGQQINVRNLRSQRVIRARVVGPGQVEVAM 252 >gi|24459271|gb|AAL86624.1| FlgA [Vibrio fischeri ES114] Length = 248 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 RG Y + + D+VG +R + + + + ++ R V I +G ++I T G A Sbjct: 158 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 213 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 L D ++GD + VKN + +V+G V G + + Sbjct: 214 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 246 >gi|190574268|ref|YP_001972113.1| flagellar basal body P-ring biosynthesis protein FlgA [Stenotrophomonas maltophilia K279a] gi|190012190|emb|CAQ45813.1| putative flagella basal body P-ring formation protein [Stenotrophomonas maltophilia K279a] Length = 218 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I GE L + + Q + I G +G + RR L ++ + L +I Sbjct: 102 IGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RG V ++ +G++ + AG A+ DA + ++V+N+ + +V G+V G V Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214 >gi|315179622|gb|ADT86536.1| Flagellar basal body P-ring biosynthesis protein [Vibrio furnissii NCTC 11218] Length = 233 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%) Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I + GL R L ++ +++ +P ++ +G +V II + + ST G+AL D G Sbjct: 146 IDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRG 205 Query: 124 DVIAVKN 130 + I V+N Sbjct: 206 EQIEVQN 212 >gi|59712487|ref|YP_205263.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio fischeri ES114] gi|59480588|gb|AAW86375.1| flagellar P-ring chaperone FlgA [Vibrio fischeri ES114] Length = 255 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 RG Y + + D+VG +R + + + + ++ R V I +G ++I T G A Sbjct: 165 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 220 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 L D ++GD + VKN + +V+G V G + + Sbjct: 221 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 253 >gi|296135677|ref|YP_003642919.1| flagella basal body P-ring formation protein FlgA [Thiomonas intermedia K12] gi|295795799|gb|ADG30589.1| flagella basal body P-ring formation protein FlgA [Thiomonas intermedia K12] Length = 242 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + AG VL + L ++ + + + +VG V R + + S+L P ++ Sbjct: 125 LQAGHVLTAADLTTVERDAARLPPGAVTDAQALVGQVLRYSVAAGQPLVQSMLTGPQLVH 184 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 G V +I + + G A++D +G + V+N+ +G +VSG +VDT Sbjct: 185 YGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVRNVQSGRVVSG-IVDT 233 >gi|192292790|ref|YP_001993395.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris TIE-1] gi|192286539|gb|ACF02920.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris TIE-1] Length = 342 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 44/84 (52%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G+ R+ L V+ + L +P +++R V +I + ++ G AL + GDV+ Sbjct: 247 IGMQARQTLRSGQVLRGADLAKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVN 306 Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151 V N+ + ++G+V+ G V + V Sbjct: 307 VLNLQSKRTITGTVIGRGQVAITV 330 >gi|114320051|ref|YP_741734.1| flageller protein FlgA [Alkalilimnicola ehrlichii MLHE-1] gi|114226445|gb|ABI56244.1| flagellar protein FlgA [Alkalilimnicola ehrlichii MLHE-1] Length = 238 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%) Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y + ++G RR L +I + L P ++ RG V + G + ++ G AL Sbjct: 147 YETEAEHLIGKELRRSLRRGDLIAGNALAAPQLVQRGRSVTLRAGGGRVQVTGQGKALES 206 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +GD++ V+ +G +V G V V V Sbjct: 207 GVLGDIVRVEAGSSGRVVEGRVAGESLVEV 236 >gi|260779351|ref|ZP_05888243.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] gi|260605515|gb|EEX31810.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] Length = 265 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV IN + ++ LK ++ N ++ + V G+V R + ++ L Sbjct: 144 VVTKTGINRDQAISPMNLK-LEKRTLNREQDFFTQLSQVSGMVASRRIRSGQILDPRKLE 202 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 ++++G +V I ++ T ST G+AL + G+ I V+N +G ++ Sbjct: 203 STPLVAKGNQVVITASKNGFTASTKGVALEQGTRGEQIDVQNSSSGKVIKA 253 >gi|227538321|ref|ZP_03968370.1| competence protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241836|gb|EEI91851.1| competence protein [Sphingobacterium spiritivorum ATCC 33300] Length = 692 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 ++DSL VI ++++P ++ +++ + QV++ NIR N S D+ V + Sbjct: 564 NMDSLQHPVIAYSILPDLL----RYTHQNEINFEQVSDDNIRQNLRLSTSDISITVLEKY 619 Query: 76 LLPDHVIPLSVL 87 + PD V+P +L Sbjct: 620 ITPDKVLPSQIL 631 >gi|197334457|ref|YP_002156706.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri MJ11] gi|197315947|gb|ACH65394.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri MJ11] Length = 211 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 RG Y + + D+VG +R + + + + ++ R V I +G ++I T G A Sbjct: 121 RGGYIN-VDDLVGARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTA 176 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 L D ++GD + VKN + +V+G V G + + Sbjct: 177 LGDGALGDKVNVKNDKSNRIVNGIVTSVGEISI 209 >gi|331006029|ref|ZP_08329371.1| Flagellar basal-body P-ring formation protein flgA [gamma proteobacterium IMCC1989] gi|330420158|gb|EGG94482.1| Flagellar basal-body P-ring formation protein flgA [gamma proteobacterium IMCC1989] Length = 241 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +I +G KV I G++T+ T+G AL + G+ I VKN+ + ++ ++ +V V++ Sbjct: 182 LIKKGDKVNISAKVGSLTVVTSGTALDNGRKGEQIDVKNLRSSRIIRTKIIGASSVEVIL 241 >gi|308050028|ref|YP_003913594.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] gi|307632218|gb|ADN76520.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] Length = 252 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Query: 47 KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 +E+ VT+ + + + +VG RR + D I S + P +S G +V I G Sbjct: 152 RELGVTSQD----WVFARDALVGQSVRRAIRADKPIRHSQVTAPNWVSLGQEVLIEAAGG 207 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G+AL S G + V+N+ +G +++ V G V+ Sbjct: 208 GFSAVMKGVALDAGSEGQPVRVRNLSSGQVITAYPVAPGKVQT 250 >gi|119899031|ref|YP_934244.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp. BH72] gi|119671444|emb|CAL95357.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp. BH72] Length = 256 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+G +V + + AG+++ + L + + N + G TR + + Sbjct: 129 SVLGEYLVTAQPLRAGQIIGPADLVRRDGDLATLPDNTLTDVAQASGQYTRFAIAQGSPL 188 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK----NIDTGVMVS 138 +L P + +G V+++ +S+ G+AL++ + GD + V+ + TG + Sbjct: 189 RADMLRIPPAVRQGQTVQVVTVGSGFRVSSEGVALNNGAPGDPVRVRLGGGQVVTGAARA 248 Query: 139 GSVVD 143 G VV+ Sbjct: 249 GGVVE 253 >gi|317053421|ref|YP_004119188.1| NADPH-dependent FMN reductase [Pantoea sp. At-9b] gi|316953160|gb|ADU72632.1| NADPH-dependent FMN reductase [Pantoea sp. At-9b] Length = 183 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 ++++GE+L+ K + + N ++R + AHS + L LLPD P + L PYV+ Sbjct: 96 IVSSGELLD----KPLALPNLSVRAHLAHS-QLAETLTVMGALLPDQCCPRATLATPYVL 150 Query: 94 SRGAKVRII 102 + +I Sbjct: 151 PESTEFSLI 159 >gi|332994168|gb|AEF04223.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas sp. SN2] Length = 240 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV S ++ G VL+ S L V +R + + ++G +R ++ + ++L Sbjct: 121 VVTSGAVSPGTVLSASNLTLASVDIKRLRYSAFTDVDALIGARMKRRIVDGQAVQSNML- 179 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 + +G ++ I + G M + T+GIA D IGD I V N Sbjct: 180 --CFVCKGDRITIRASLGGMAVKTSGIAQQDGVIGDTIKVLN 219 >gi|160876209|ref|YP_001555525.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS195] gi|160861731|gb|ABX50265.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS195] gi|315268399|gb|ADT95252.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS678] Length = 235 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GE+++ S+++ + +++RG + G+ +R + D+ I + + Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + + + TAG AL D + GD I VKN + + V G V Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|304409984|ref|ZP_07391603.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|307302303|ref|ZP_07582061.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] gi|304351393|gb|EFM15792.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|306914341|gb|EFN44762.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] Length = 235 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GE+++ S+++ + +++RG + G+ +R + D+ I + + Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + + + TAG AL D + GD I VKN + + V G V Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|167039378|ref|YP_001662363.1| SAF domain-containing protein [Thermoanaerobacter sp. X514] gi|300914019|ref|ZP_07131336.1| SAF domain protein [Thermoanaerobacter sp. X561] gi|307725296|ref|YP_003905047.1| SAF domain-containing protein [Thermoanaerobacter sp. X513] gi|166853618|gb|ABY92027.1| SAF domain [Thermoanaerobacter sp. X514] gi|300890704|gb|EFK85849.1| SAF domain protein [Thermoanaerobacter sp. X561] gi|307582357|gb|ADN55756.1| SAF domain protein [Thermoanaerobacter sp. X513] Length = 181 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 I AG V++E +K + + S +R +YA S+ DVVG V + + IP+ +L Sbjct: 39 IPAGTVISEDAVKVVDIPASAVRPDYARSLTDVVGKVVKEGRVRGDFIPVEIL 91 >gi|254524107|ref|ZP_05136162.1| flagellar protein [Stenotrophomonas sp. SKA14] gi|219721698|gb|EED40223.1| flagellar protein [Stenotrophomonas sp. SKA14] Length = 218 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 53/113 (46%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I GE + + + Q + I G +G + RR L ++ + L +I Sbjct: 102 IGTGETITAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLIK 161 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RG V ++ +G++ + AG A+ DA + ++V+N+ + +V G+V G V Sbjct: 162 RGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDV 214 >gi|254478346|ref|ZP_05091725.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] gi|214035704|gb|EEB76399.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] Length = 181 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 I AG V++E +K + V S +R YA S+ DVVG V + + IP+ +L Sbjct: 39 IPAGTVISEDAVKIIDVPASAVRPEYARSLTDVVGKVVKEGRVRGDFIPVEIL 91 >gi|120598226|ref|YP_962800.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. W3-18-1] gi|146293696|ref|YP_001184120.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella putrefaciens CN-32] gi|120558319|gb|ABM24246.1| SAF domain [Shewanella sp. W3-18-1] gi|145565386|gb|ABP76321.1| SAF domain [Shewanella putrefaciens CN-32] gi|319427095|gb|ADV55169.1| flagella basal body P-ring formation protein FlgA [Shewanella putrefaciens 200] Length = 235 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + ++ G+ +N S+++ + +++RG + G +R + + I + L Sbjct: 116 VVTTEILAPGDRINASQIEVRYIEQNSLRGQQFDDPSQLEGTRVKRRIAKESPIFANNL- 174 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + + I + + + TAG AL D +IG+ I VKN + + V+ G V Sbjct: 175 --CFVCKNDAISIYVRSPSFMLKTAGEALQDGNIGEQIRVKNSSSNKQLDAIVIGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|209884525|ref|YP_002288382.1| flageller protein FlgA [Oligotropha carboxidovorans OM5] gi|209872721|gb|ACI92517.1| flageller protein FlgA [Oligotropha carboxidovorans OM5] Length = 351 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 13/148 (8%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +RF F +++++ A+V+ + + +I A + LN R + +V G A Sbjct: 190 LRFTGF------AVETVQAAVLMRPIGRNEIIKASD-LNVERRPKAEV------GGDAIP 236 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 ++ +G+ TRR + + S L + +++R + ++ + +++ G AL + G Sbjct: 237 LEQAIGMQTRRAMRIGDALRSSDLAKADLVTRDQTISLVYETPGLYLTSRGKALEAGTKG 296 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 D ++V N+ + V G VV G V ++ Sbjct: 297 DTVSVLNLQSKRTVQGIVVGPGQVAIIA 324 >gi|308273545|emb|CBX30147.1| hypothetical protein N47_D29560 [uncultured Desulfobacterium sp.] Length = 251 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 6/132 (4%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV---VGLVTRRV 75 S + V V S +N G+V+ ++ + NI + ++KDV +G + + Sbjct: 119 SGWVDVFDSVVCASHNLNRGDVITAG---DIHLERKNISRLNSDTLKDVDQAIGFMAKHD 175 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + + +L + ++++G V I+ G++ I+ G L +GD I V+N + Sbjct: 176 IKDNDCLKEWMLKKTPLVNKGDMVTILAEHGSIRITAPGRILEKGYMGDYIKVQNTMSKK 235 Query: 136 MVSGSVVDTGTV 147 V +V+ TV Sbjct: 236 SVYAKIVNDSTV 247 >gi|126175152|ref|YP_001051301.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS155] gi|125998357|gb|ABN62432.1| SAF domain [Shewanella baltica OS155] Length = 235 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GE+++ S+++ + +++RG + G+ +R + D+ I + + Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDYPI---LSN 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + + + TAG AL D + GD I VKN + + V G V Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|310816832|ref|YP_003964796.1| flagella basal body P-ring formation protein FlgA [Ketogulonicigenium vulgare Y25] gi|308755567|gb|ADO43496.1| flagella basal body P-ring formation protein FlgA [Ketogulonicigenium vulgare Y25] Length = 138 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +++GL R + + S +P ++ R + + T+G +TI G AL A GD+ Sbjct: 53 EIIGLEARTPIYAGRPLQASQFGQPAIVQRNQVIAMQFTRGALTIMAEGRALERAGPGDL 112 Query: 126 IAVKNIDT 133 I V N+ + Sbjct: 113 IRVMNLQS 120 >gi|260772269|ref|ZP_05881185.1| flagellar basal-body P-ring formation protein FlgA [Vibrio metschnikovii CIP 69.14] gi|260611408|gb|EEX36611.1| flagellar basal-body P-ring formation protein FlgA [Vibrio metschnikovii CIP 69.14] Length = 255 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 V+G T+R L VI + + V+ R V I M I+T G ALSD ++G+ I Sbjct: 174 VIGAKTKRNLQLGDVINRNDI---CVVCRNESVLIRAISNGMNITTRGTALSDGNLGEQI 230 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 VKN + ++ V G V V Sbjct: 231 KVKNDRSNRIIDAQVSGMGEVTV 253 >gi|291326358|ref|ZP_06124207.2| flagella basal body P-ring formation protein FlgA [Providencia rettgeri DSM 1131] gi|291314705|gb|EFE55158.1| flagella basal body P-ring formation protein FlgA [Providencia rettgeri DSM 1131] Length = 212 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + S+ +P+ I G V + + N ++ G A+++A+ G V Sbjct: 130 GAVALRNIPAGQTFTKSMTRQPWAIKAGQTVFVFASGDNFSVKYEGRAINNATAGQNTRV 189 Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152 + ++ G +V+G ++ G+V+V +K Sbjct: 190 RLLN-GQVVNGEALENGSVQVALK 212 >gi|297570290|ref|YP_003691634.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio alkaliphilus AHT2] gi|296926205|gb|ADH87015.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio alkaliphilus AHT2] Length = 247 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 60/123 (48%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G V+ + IN GEV++ L + + G+ + V G+ R L ++ Sbjct: 121 MGQVVMTARRINRGEVISRDDLVVHRRDIGMLDGSIINDPALVAGMQLRTTLQAGAIVYQ 180 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 ++L +P ++ RG +V I + G + ++ G + GD++ V+N+ + + VV++ Sbjct: 181 NLLEKPPLVRRGDRVTIRASTGRVLVNAPGEVREIGAEGDLVRVRNLMSRREIMARVVNS 240 Query: 145 GTV 147 G V Sbjct: 241 GLV 243 >gi|163738059|ref|ZP_02145475.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107] gi|161388675|gb|EDQ13028.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107] Length = 138 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%) Query: 14 VLSLDSLFASVIGHA--VVPSVVINAGEVLNESRL--KEMQVTNSNIRGNYAHSIKDVVG 69 +L++ LF + A +VP I A E++ L K+ +V + + + V Sbjct: 4 ILAIVMLFCAQPAWADILVPVRTIRAKEIVTAEDLVLKQAEVLGAISDPSLVIGQEARVA 63 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L R + P V P P ++ R V I +G +TI G +L + G+ I V Sbjct: 64 LYAGRPMRPGDVGP------PAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVM 117 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ + +SG + GTV V Sbjct: 118 NLSSRTTISGRIAADGTVEV 137 >gi|209695768|ref|YP_002263698.1| flagellar basal body P-ring biosynthesis protein FlgA [Aliivibrio salmonicida LFI1238] gi|208009721|emb|CAQ80025.1| polar flagellar basal-body P-ring formation protein FlgA [Aliivibrio salmonicida LFI1238] Length = 248 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 RG Y ++ D++G +R + V+ + + ++ R V I +G ++I T G A Sbjct: 158 RGGYINT-NDLIGSRIKRSVRAGDVVEKNDI---CMVCRNDSVIIKAVKGELSILTKGTA 213 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 L DA++GD + V+N + +++G V G + + Sbjct: 214 LGDAALGDNVNVQNNKSKRIINGVVTAVGEISI 246 >gi|77464903|ref|YP_354407.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|332559801|ref|ZP_08414123.1| FlgA2 [Rhodobacter sphaeroides WS8N] gi|77389321|gb|ABA80506.1| putative flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|332277513|gb|EGJ22828.1| FlgA2 [Rhodobacter sphaeroides WS8N] Length = 139 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 47 KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 +++ + ++ G A + +G R L + + L P +I R V + G Sbjct: 34 EDLALAPQDMPGALAE-LSQALGQEARVTLYAGRPVRAADLGPPAIIDRNQLVPLSYRLG 92 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + I G ALS +GD I V N+ + VSG + + G V V Sbjct: 93 ALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVHV 135 >gi|224013241|ref|XP_002295272.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968995|gb|EED87338.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 373 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%) Query: 40 VLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL-----PDHVIPLSVLHRPYVIS 94 V S L M +++G A+ I VG +T VLL H++ L + Y + Sbjct: 249 VWGGSCLVPMHYAQGDVKG-LAYVISFSVGALTVTVLLWVARFAYHLVKLKSVWEAYEVL 307 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 +R++L G +TAG S ++G ++AVK++ GV S S Sbjct: 308 PSFHLRVMLLPG----ATAGSLWSIGNVGSIVAVKHLGQGVGYSAS 349 >gi|325927870|ref|ZP_08189094.1| flagella basal body P-ring formation protein FlgA [Xanthomonas perforans 91-118] gi|325541710|gb|EGD13228.1| flagella basal body P-ring formation protein FlgA [Xanthomonas perforans 91-118] Length = 214 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|167036494|ref|YP_001664072.1| SAF domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320114922|ref|YP_004185081.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855328|gb|ABY93736.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928013|gb|ADV78698.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 I AG V+++ +K V S +R NYA S+ DV+G V + + IP+ +L Sbjct: 39 IPAGTVISQDAVKVTDVPASVVRPNYAKSLADVIGKVVKEGRVQGDFIPVEIL 91 >gi|313672413|ref|YP_004050524.1| flagella basal body p-ring formation protein flga [Calditerrivibrio nitroreducens DSM 19672] gi|312939169|gb|ADR18361.1| flagella basal body P-ring formation protein FlgA [Calditerrivibrio nitroreducens DSM 19672] Length = 281 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 45 RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104 ++KE+QV +N++ + + D + + + + + VI L ++ + +G KV++I Sbjct: 180 KIKEVQVEVTNLKDDLFLNNFDAIAI---QPIPKNRVITLKMVRQMPEKMKGEKVKVIYN 236 Query: 105 QGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 G + + + + DA G ++VKN+ + +++G Sbjct: 237 NGTIVLEFEAVLMDDAYKGGRVSVKNLSSDKVLTG 271 >gi|30248318|ref|NP_840388.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas europaea ATCC 19718] gi|30138204|emb|CAD84212.1| putative flagella basal body P-ring formation protein [Nitrosomonas europaea ATCC 19718] Length = 230 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 8/138 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LYV + V+ HA P ++ G+ L + + I G A V+G Sbjct: 94 WTLYVPVEIEVITRVV-HAAQP---VSMGKQLEAQDIVSKEADLVRIPGEVATDPDQVIG 149 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V L I L P+VISRG KVR+ T +S G AL+ A+ G+V+ V+ Sbjct: 150 KVATTFLASGQPIRTHQLRAPHVISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVR 209 Query: 130 N----IDTGVMVSGSVVD 143 N I G+ +G VV+ Sbjct: 210 NHTGRIIRGIARAGGVVE 227 >gi|153001478|ref|YP_001367159.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS185] gi|151366096|gb|ABS09096.1| SAF domain protein [Shewanella baltica OS185] Length = 235 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GE+++ S+++ + +++RG + G+ +R + D+ I + + Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPSKLAGVRVKRRVSKDNPI---LSN 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + + + TAG AL D + GD I VKN + + V G V Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|166712067|ref|ZP_02243274.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 214 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|39998141|ref|NP_954092.1| flagella basal body P-ring formation protein flgA [Geobacter sulfurreducens PCA] gi|39985087|gb|AAR36442.1| flagella basal body P-ring formation protein flgA, putative [Geobacter sulfurreducens PCA] gi|298507078|gb|ADI85801.1| flagellar basal body P-ring formation protein FlgA [Geobacter sulfurreducens KN400] Length = 248 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 48/96 (50%) Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113 S++ G SI +VVG + + + + + + + ++ G V II + ++ Sbjct: 151 SSVNGRVYRSIDEVVGKRVKNAVRANTPLSGASIEKVPLVKSGQLVTIIAESPALRLTAT 210 Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G A + + GD+I V+N+ + + V+D GTV+V Sbjct: 211 GKARGNGAEGDIIKVQNMGSLKEIPARVIDVGTVQV 246 >gi|58582190|ref|YP_201206.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576751|ref|YP_001913680.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576942|ref|YP_001913871.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426784|gb|AAW75821.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188521203|gb|ACD59148.1| flagella basal body P-ring formation protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521394|gb|ACD59339.1| flagella basal body P-ring formation protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] Length = 214 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|84624083|ref|YP_451455.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368023|dbj|BAE69181.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 214 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|89068732|ref|ZP_01156118.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516] gi|89045695|gb|EAR51757.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516] Length = 218 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 56/121 (46%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP I E++ E+ L +++ + ++ +VG+ RRVL + + Sbjct: 97 VPVRRILPDEIIAEADLDVVRLPMGRVGAFAVVDLEALVGMQVRRVLSQGRPVMSQSVIE 156 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P VI RG V I + G + ++ G A++ A G + V N+ + +V+G G V V Sbjct: 157 PLVIERGDAVSIRYSDGALELTAPGRAMAGAHRGQDVRVVNLASNRLVTGIAARDGIVEV 216 Query: 150 V 150 + Sbjct: 217 L 217 >gi|126463745|ref|YP_001044859.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides ATCC 17029] gi|126105409|gb|ABN78087.1| SAF domain [Rhodobacter sphaeroides ATCC 17029] Length = 139 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 47 KEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106 +++ + ++ G A + +G R L + + L P +I R V + G Sbjct: 34 EDLALAPQDMPGALAE-LSQALGQEARVTLYAGRPVRAADLGPPAIIDRNQLVPLSYRLG 92 Query: 107 NMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + I G ALS +GD I V N+ + VSG + + G V V Sbjct: 93 ALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVHV 135 >gi|117919766|ref|YP_868958.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. ANA-3] gi|117612098|gb|ABK47552.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. ANA-3] Length = 235 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV S + GE+++ ++++ + +++RG + G+ +R + + I + L Sbjct: 116 VVASETLAPGELISPTQVEIRYIDQNSLRGMQFSDTSQLSGVRVKRRVAKNFPIFANNL- 174 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + N + T G AL D +IGD I VKN + + V G V Sbjct: 175 --CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDAIVTAIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|323702114|ref|ZP_08113782.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM 574] gi|323532996|gb|EGB22867.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM 574] Length = 234 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 29/63 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VVP I +L +K + I+ A KDVVG VTR L P+ I LS Sbjct: 40 QVVVPKQTIGPNTMLTAQMVKVKDIPVEMIQPGTAMDTKDVVGKVTRSDLYPEEPILLSR 99 Query: 87 LHR 89 LH+ Sbjct: 100 LHQ 102 >gi|229587471|ref|YP_002860509.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657] gi|229260129|gb|ACQ51166.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657] Length = 242 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 9 FFSLYV-LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + S Y ++L +L S ++ VIN GE++NE ++E + +NI N + KD+ Sbjct: 33 YVSEYANINLPTLNKSSKAPVIIAKRVINEGELINEGDIEEKIMPINNIAKNTINVKKDL 92 Query: 68 VGLVTRRVLLPDHVI 82 +G +T L P+ I Sbjct: 93 IGKITVNKLEPNEQI 107 >gi|254420864|ref|ZP_05034588.1| flagella basal body P-ring formation protein FlgA [Brevundimonas sp. BAL3] gi|196187041|gb|EDX82017.1| flagella basal body P-ring formation protein FlgA [Brevundimonas sp. BAL3] Length = 203 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD--HVIPL 84 V PSVVI AG++ ++R + TN N G +++ G V+ D P Sbjct: 58 QRVGPSVVIEAGQLQAQARQAGLDWTNPN--GLRRVAVRRSTGPVSAAAAQTDLQASAPQ 115 Query: 85 S-VLHRP-----YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 + ++RP VI+R VR+ G + +S G A+ +A++G+ +AV N Sbjct: 116 NRPVYRPAGGGQQVIARNDMVRVTYQVGGVNLSIMGKAMRNAALGEPVAVLN 167 >gi|332284015|ref|YP_004415926.1| flagella basal body P-ring formation protein [Pusillimonas sp. T7-7] gi|330427968|gb|AEC19302.1| flagella basal body P-ring formation protein [Pusillimonas sp. T7-7] Length = 236 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI---RGNYAHSIKDVVGLVTRRVLLPD 79 S+ G+ V + I GEV++ L +M +I N VG + + + Sbjct: 109 SIQGYYYVANRNIEVGEVVS---LDDMAAREGDILRLANNIIFDPSQAVGYIASQRIRAG 165 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I S L P I RG VR + G AL + + G I V+ +G ++SG Sbjct: 166 GPIKSSALRDPDSIQRGQMVRTEARGAGFVATGEGQALQNGAPGAQIQVR-ASSGQVISG 224 Query: 140 SVVDTGTVRVVV 151 VV+ TVR+V+ Sbjct: 225 VVVNAHTVRIVM 236 >gi|332296515|ref|YP_004438438.1| flagella basal body P-ring formation protein FlgA [Thermodesulfobium narugense DSM 14796] gi|332179618|gb|AEE15307.1| flagella basal body P-ring formation protein FlgA [Thermodesulfobium narugense DSM 14796] Length = 225 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-----G 134 VI L ++ + I G +V ++ GN T S +ALS SIGD I V+ I G Sbjct: 154 QVIRLGLISKRIDIRLGQRVIVVGKVGNATFSLPAVALSSGSIGDDIKVRCITNNKVFIG 213 Query: 135 VMVSGSVVDTG 145 ++S S V TG Sbjct: 214 KIISSSEVQTG 224 >gi|330502728|ref|YP_004379597.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina NK-01] gi|328917014|gb|AEB57845.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina NK-01] Length = 234 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 42/93 (45%) Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 N+ +G R L D V+ S L VI RG +V I + + G AL+ Sbjct: 142 NFLTDPTQAIGKKLTRQLGGDQVLAPSHLQIAEVIRRGDQVVISARGTTVNVRMPGEALT 201 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 D + G+ I V+N+ + +V VV G V V + Sbjct: 202 DGAPGEQINVRNLRSQRVVRARVVGPGQVEVAM 234 >gi|289666042|ref|ZP_06487623.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670501|ref|ZP_06491576.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 214 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|78047591|ref|YP_363766.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036021|emb|CAJ23712.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 252 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 168 AVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 227 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 228 SVENSSSRRVVQGIVEASGTV 248 >gi|163856431|ref|YP_001630729.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella petrii DSM 12804] gi|163260159|emb|CAP42461.1| flagella basal body P-ring formation protein FlgA [Bordetella petrii] Length = 241 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VG+ R + I + L ++RG +VRI IS+ G AL DA G + Sbjct: 158 IVGMRARYRIAAGQAIKGTALRSARAVTRGQQVRITARGAGFVISSEGEALDDAPPGAPV 217 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151 V+ +G +VSG V + V VV+ Sbjct: 218 QVRT-PSGQVVSGIVRNATLVEVVL 241 >gi|78221653|ref|YP_383400.1| flageller protein FlgA [Geobacter metallireducens GS-15] gi|78192908|gb|ABB30675.1| flagellar protein FlgA [Geobacter metallireducens GS-15] Length = 236 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV- 81 +G VV + G+V+ + + + S + G S +V+G +R +P Sbjct: 108 EALGDTVVVLRALERGDVIGAADVTVQRRDLSTLTGRVYRSADEVIG---KRARMPVRAN 164 Query: 82 IPL--SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 +PL L + ++ G V I++ M ++ G A + + GD++ V+N+ + V Sbjct: 165 MPLRGDQLEKVPLVKSGQLVTILVENQAMRLTATGKARGNGAEGDIVMVQNLGSLKEVPA 224 Query: 140 SVVDTGTVRV 149 V+D GTV+V Sbjct: 225 RVIDAGTVQV 234 >gi|217972592|ref|YP_002357343.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS223] gi|217497727|gb|ACK45920.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS223] Length = 235 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GE+++ S+++ + +++RG + G+ +R + D+ I + + Sbjct: 116 VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPGKLAGVRVKRRVSKDNPI---LSN 172 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + V I + + + TAG AL D + GD I VKN + + V G V Sbjct: 173 NLCFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDRIRVKNSSSNKELDAIVTGIGEVE 232 Query: 149 V 149 V Sbjct: 233 V 233 >gi|167038605|ref|YP_001666183.1| SAF domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116994|ref|YP_004187153.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857439|gb|ABY95847.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319930085|gb|ADV80770.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 181 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 I AG V++E +K + V S ++ NYA S+ +VVG V + + IP+ +L Sbjct: 39 IPAGTVISEDAVKVVDVPASAVKPNYARSLSNVVGKVVKEGRVRGDFIPVEIL 91 >gi|209522282|ref|ZP_03270910.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. H160] gi|209497276|gb|EDZ97503.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. H160] Length = 342 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 96 GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G VR++ +IS+ G A+++AS G + VK + G +VSG V D GTV + Sbjct: 288 GQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVKTAN-GQIVSGIVKDGGTVEI 340 >gi|149193821|ref|ZP_01870919.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter mediatlanticus TB-2] gi|149135774|gb|EDM24252.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter mediatlanticus TB-2] Length = 157 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV---KNIDTGVMVSGS 140 L+ P V+ RG V + + N+TI+T AL D +IGD+I + K I ++V+ + Sbjct: 94 LNTKKAPLVL-RGENVNVTIKSKNITITTTAKALKDGNIGDIINIEMNKRIYKAIVVNKN 152 Query: 141 VVD 143 V+ Sbjct: 153 QVE 155 >gi|329898293|ref|ZP_08272376.1| flagellar protein [gamma proteobacterium IMCC3088] gi|328920858|gb|EGG28301.1| flagellar protein [gamma proteobacterium IMCC3088] Length = 316 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%) Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +V L T R L + S + +G + + + +G ++I+ A IG+V Sbjct: 231 EVKHLETTRDLTSGEYLRKSNTKPTLAVRKGEILTLSIVRGMISITAQVRASEGGKIGEV 290 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 I ++NID+G +V G VVD G V ++ Sbjct: 291 IELENIDSGNLVLGMVVDIGKVELL 315 >gi|262404546|ref|ZP_06081101.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC586] gi|262349578|gb|EEY98716.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC586] Length = 255 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD IG+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIKAGRSGMSITTKGTAMSDGVIGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|295097207|emb|CBK86297.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 232 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 +F L FS+ S G V S + GE++ + + M + ++ Sbjct: 95 KFYLPFSI----------SAQGTFWVASHSLKGGEIVQQGDITPMTGSIDDLPVGLMFEA 144 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 +D+VG R L + + L + + + G V ++++ I + G AL++A++ D Sbjct: 145 RDIVGQRLLRPLSAGKPVLQNQLRQQWRLRAGQTVELVMSGPGFFIRSQGKALNNAAVDD 204 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 + VK G V+G V G V + ++ Sbjct: 205 TLRVKTTG-GRNVTGKVGRDGAVTIFLE 231 >gi|325918872|ref|ZP_08180949.1| flagella basal body P-ring formation protein FlgA [Xanthomonas vesicatoria ATCC 35937] gi|325534909|gb|EGD06828.1| flagella basal body P-ring formation protein FlgA [Xanthomonas vesicatoria ATCC 35937] Length = 214 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKSARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|183220920|ref|YP_001838916.1| flagellar protein FlgAide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911016|ref|YP_001962571.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775692|gb|ABZ93993.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779342|gb|ABZ97640.1| Flagellar protein FlgA; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 313 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 39/84 (46%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 ++ ++ VG LPD I + + I RG +V ++ T GN+ + AL+ + Sbjct: 223 YTDENPVGKTALNGFLPDTAIEKKQVRTLHTIERGQEVELVYTVGNLLLKIKTRALASGN 282 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTG 145 G+ I + N+ + + V + G Sbjct: 283 RGEEIPLLNLASQKTIRARVQNEG 306 >gi|325921019|ref|ZP_08182901.1| flagella basal body P-ring formation protein FlgA [Xanthomonas gardneri ATCC 19865] gi|325548501|gb|EGD19473.1| flagella basal body P-ring formation protein FlgA [Xanthomonas gardneri ATCC 19865] Length = 214 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 130 AVGKTARRILPAGSLLSSNDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 189 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 190 SVENSSSRRVVQGIVEASGTV 210 >gi|77748624|ref|NP_642314.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas axonopodis pv. citri str. 306] Length = 214 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%) Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 VG RR+L ++ + L ++ RG V ++ G + + G ALSDA + ++ Sbjct: 131 VGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVS 190 Query: 128 VKNIDTGVMVSGSVVDTGTV 147 V+N + +V G V +GTV Sbjct: 191 VENSSSRRVVQGIVEASGTV 210 >gi|220932493|ref|YP_002509401.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix orenii H 168] gi|219993803|gb|ACL70406.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix orenii H 168] Length = 336 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 +L DH L +P VI G V + N+ +ST+ AL +GD + V N +TG Sbjct: 266 ILTTDH------LEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETG 319 Query: 135 VMVSGSVVDTGTVRVV 150 V+++ VRVV Sbjct: 320 YEFKARVINSRLVRVV 335 >gi|167567746|ref|ZP_02360662.1| flagella basal body P-ring formation protein FlgA [Burkholderia oklahomensis EO147] gi|167574697|ref|ZP_02367571.1| flagella basal body P-ring formation protein FlgA [Burkholderia oklahomensis C6786] Length = 256 Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 +D +G +RR + ++ L P +I RG VR++ G I G+A+ D Sbjct: 160 EDAIGRSSRRAVHAGQILRRRHLQTPELIRRGQTVRVVARVGRAEIVNTGVAMQSGGKDD 219 Query: 125 VIAV--------KNIDTGVMVSGSVVDTG 145 VI V K +D + +G+ G Sbjct: 220 VIRVRVGGRSNHKTVDVRITAAGTAEPVG 248 >gi|315127359|ref|YP_004069362.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas sp. SM9913] gi|315015873|gb|ADT69211.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas sp. SM9913] Length = 213 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + GEV+ S L IR Y ++G ++R + +P+ +L+ Sbjct: 94 VVATTNLARGEVITPSHLSIDMRPAHFIRAQYLEDPTALIGSRSKRNIR--EGMPV-LLN 150 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + ++ +G V I + + T GIAL D ++G+ + V+N TG +++ V +V+ Sbjct: 151 QICMVCKGDSVTIYANIKGLRVKTTGIALEDGTLGEQVRVENKKTGKVLNARVDGVESVQ 210 Query: 149 V 149 V Sbjct: 211 V 211 >gi|329849715|ref|ZP_08264561.1| distal basal body ring component protein [Asticcacaulis biprosthecum C19] gi|328841626|gb|EGF91196.1| distal basal body ring component protein [Asticcacaulis biprosthecum C19] Length = 193 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 14/50 (28%), Positives = 30/50 (60%) Query: 96 GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 G + + + G +T++ G+A DA++GD+I ++N + M+ V+ +G Sbjct: 125 GEAISVTWSSGGLTLTITGVAQKDAAVGDLIQIQNPSSKKMIDAVVIGSG 174 >gi|293604999|ref|ZP_06687395.1| flagella basal body P-ring formation protein FlgA [Achromobacter piechaudii ATCC 43553] gi|292816604|gb|EFF75689.1| flagella basal body P-ring formation protein FlgA [Achromobacter piechaudii ATCC 43553] Length = 238 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV G+ V S +I+AG+ L L ++ + VVG+ + + Sbjct: 111 SVPGYYYVASRMISAGQALTPDDLAPRDGDLVSLPPGAITDPQAVVGMSAAFRINAGQPV 170 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S L + RGA VRI +S+ G AL +A+ G V+ V+ +G +VSG V Sbjct: 171 RSSSLRNAQSVMRGANVRINARGNGFVVSSEGQALDNAAPGAVVQVRTA-SGQVVSGVVR 229 Query: 143 DTGTVRV 149 + G V + Sbjct: 230 NAGLVEI 236 >gi|294664586|ref|ZP_06729927.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605643|gb|EFF48953.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 268 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 184 AVGKAARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 243 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 244 SVENSSSRRVVQGIVEASGTV 264 >gi|153213632|ref|ZP_01948905.1| flagellar protein, putative [Vibrio cholerae 1587] gi|124115831|gb|EAY34651.1| flagellar protein, putative [Vibrio cholerae 1587] Length = 255 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|297580849|ref|ZP_06942774.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534675|gb|EFH73511.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 255 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|15642202|ref|NP_231834.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586266|ref|ZP_01676056.1| flagellar protein, putative [Vibrio cholerae 2740-80] gi|121726549|ref|ZP_01679798.1| flagellar protein, putative [Vibrio cholerae V52] gi|147674697|ref|YP_001217720.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae O395] gi|153817121|ref|ZP_01969788.1| flagellar protein, putative [Vibrio cholerae NCTC 8457] gi|153820832|ref|ZP_01973499.1| flagellar protein, putative [Vibrio cholerae B33] gi|153825364|ref|ZP_01978031.1| flagellar protein, putative [Vibrio cholerae MZO-2] gi|153829335|ref|ZP_01982002.1| putative flagellar protein [Vibrio cholerae 623-39] gi|183179559|ref|ZP_02957770.1| flagellar protein, putative [Vibrio cholerae MZO-3] gi|227082327|ref|YP_002810878.1| flagellar protein, putative [Vibrio cholerae M66-2] gi|229507720|ref|ZP_04397225.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae BX 330286] gi|229512085|ref|ZP_04401564.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae B33] gi|229513847|ref|ZP_04403309.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TMA 21] gi|229519220|ref|ZP_04408663.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC9] gi|229528792|ref|ZP_04418182.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae 12129(1)] gi|229607224|ref|YP_002877872.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MJ-1236] gi|254225797|ref|ZP_04919402.1| flagellar protein, putative [Vibrio cholerae V51] gi|254286488|ref|ZP_04961445.1| flagellar protein, putative [Vibrio cholerae AM-19226] gi|254849332|ref|ZP_05238682.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MO10] gi|298500419|ref|ZP_07010224.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MAK 757] gi|9656759|gb|AAF95348.1| flagellar protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549532|gb|EAX59558.1| flagellar protein, putative [Vibrio cholerae 2740-80] gi|121631002|gb|EAX63381.1| flagellar protein, putative [Vibrio cholerae V52] gi|125621703|gb|EAZ50032.1| flagellar protein, putative [Vibrio cholerae V51] gi|126512389|gb|EAZ74983.1| flagellar protein, putative [Vibrio cholerae NCTC 8457] gi|126521624|gb|EAZ78847.1| flagellar protein, putative [Vibrio cholerae B33] gi|146316580|gb|ABQ21119.1| putative flagellar protein [Vibrio cholerae O395] gi|148875176|gb|EDL73311.1| putative flagellar protein [Vibrio cholerae 623-39] gi|149741048|gb|EDM55117.1| flagellar protein, putative [Vibrio cholerae MZO-2] gi|150423437|gb|EDN15381.1| flagellar protein, putative [Vibrio cholerae AM-19226] gi|183012970|gb|EDT88270.1| flagellar protein, putative [Vibrio cholerae MZO-3] gi|227010215|gb|ACP06427.1| flagellar protein, putative [Vibrio cholerae M66-2] gi|227014099|gb|ACP10309.1| flagellar protein, putative [Vibrio cholerae O395] gi|229332566|gb|EEN98052.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae 12129(1)] gi|229343909|gb|EEO08884.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC9] gi|229349028|gb|EEO13985.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TMA 21] gi|229352050|gb|EEO16991.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae B33] gi|229355225|gb|EEO20146.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae BX 330286] gi|229369879|gb|ACQ60302.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae MJ-1236] gi|254845037|gb|EET23451.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MO10] gi|297541112|gb|EFH77166.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MAK 757] Length = 255 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|229522152|ref|ZP_04411569.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TM 11079-80] gi|229524198|ref|ZP_04413603.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae bv. albensis VL426] gi|229337779|gb|EEO02796.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae bv. albensis VL426] gi|229341077|gb|EEO06082.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TM 11079-80] Length = 255 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|294625269|ref|ZP_06703908.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600443|gb|EFF44541.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 268 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA + + Sbjct: 184 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERV 243 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 244 SVENSSSRRVVQGIVEASGTV 264 >gi|85712248|ref|ZP_01043299.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina baltica OS145] gi|85693875|gb|EAQ31822.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina baltica OS145] Length = 233 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G ++ S L +++V S +R N + ++G T+R + I ++ Sbjct: 120 MQPGHLIAASDLTQVEVDVSQVRANLFEDNQLLIGSRTKRRVAAGKAIEA---RDTCLVC 176 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 G +V I+ + I+ G AL+D G+ +AVKN+ Sbjct: 177 EGEQVTIVAKSKALKITATGEALADGLQGESVAVKNV 213 >gi|258621043|ref|ZP_05716077.1| flagellar protein, putative [Vibrio mimicus VM573] gi|258625271|ref|ZP_05720179.1| flagellar protein, putative [Vibrio mimicus VM603] gi|258582444|gb|EEW07285.1| flagellar protein, putative [Vibrio mimicus VM603] gi|258586431|gb|EEW11146.1| flagellar protein, putative [Vibrio mimicus VM573] Length = 255 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 196 IVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVKNDKSNRIIDAQVSGVGEVTV 253 >gi|167645395|ref|YP_001683058.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp. K31] gi|167347825|gb|ABZ70560.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp. K31] Length = 247 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + AGE++ L ++V S + D++G+ +R L L + P VI Sbjct: 115 LAAGEIVQPEDLVWVKVAASP--SDSPRDADDLIGMTAKRPLRQGATASLRDVSTPQVIK 172 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 G V + G + +S G A+++ ++G+ + V+N Sbjct: 173 AGDIVAVTYEDGGVALSLQGKAMANGAVGESLMVQN 208 >gi|262166287|ref|ZP_06034024.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus VM223] gi|262170819|ref|ZP_06038497.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|261891895|gb|EEY37881.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|262026003|gb|EEY44671.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus VM223] Length = 247 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ R V I + M+I+T G A+SD +G+ I VKN + ++ V G V V Sbjct: 188 IVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVKNDKSNRIIDAQVSGVGEVTV 245 >gi|146329931|ref|YP_001210239.1| BcepGomrgp19 [Burkholderia phage BcepGomr] gi|145321107|gb|ABP63590.1| BcepGomrgp19 [Burkholderia phage BcepGomr] Length = 669 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%) Query: 100 RIILTQGNMTIS--TAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RI GN+ I T G+A+ SIG+V+ +I TGV + GS +GTV Sbjct: 526 RIYRASGNVQIRGRTDGVAIPTGSIGEVLTFNSIPTGVPIGGS---SGTV 572 >gi|295688783|ref|YP_003592476.1| flagella basal body P-ring formation protein FlgA [Caulobacter segnis ATCC 21756] gi|295430686|gb|ADG09858.1| flagella basal body P-ring formation protein FlgA [Caulobacter segnis ATCC 21756] Length = 254 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLLPDHVIPLSVLHRPY 91 + AGE++ L +++ G A + +D V+GL +R L + + Sbjct: 123 MTAGEIVQPEDLVWVKMA-----GAPADAPRDADAVIGLAAKRPLREGAAVSQRDVGAAQ 177 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 V+ G + + + G +++S G A+S AS G+V AV+N Sbjct: 178 VVKTGDLITVTYSDGGISLSLQGKAMSAASTGEVFAVQN 216 >gi|220924577|ref|YP_002499879.1| flagella basal body P-ring formation protein FlgA [Methylobacterium nodulans ORS 2060] gi|219949184|gb|ACL59576.1| flagella basal body P-ring formation protein FlgA [Methylobacterium nodulans ORS 2060] Length = 343 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 40/83 (48%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VG V +R L P + L RP ++ RG V I+ ++++ G A +G V+ Sbjct: 246 LVGQVAQRALAPGQKLRAGDLARPELVQRGETVTILYEGPGVSLALRGQAKEGGPLGAVV 305 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 AV N + ++ +V G V V Sbjct: 306 AVVNPVSKKVLQATVSGPGRVSV 328 >gi|21108208|gb|AAM36850.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 312 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 41/81 (50%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG RR+L ++ + L ++ RG V ++ G + + G ALSDA + + Sbjct: 228 AVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERV 287 Query: 127 AVKNIDTGVMVSGSVVDTGTV 147 +V+N + +V G V +GTV Sbjct: 288 SVENSSSRRVVQGIVEASGTV 308 Searching..................................................done Results from round 2 >gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str. psy62] gi|254040054|gb|ACT56850.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str. psy62] Length = 152 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY Sbjct: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA Sbjct: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK Sbjct: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 >gi|325291938|ref|YP_004277802.1| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium sp. H13-3] gi|325059791|gb|ADY63482.1| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium sp. H13-3] Length = 162 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 1/149 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 VR L + + ++ FA A+VP+ I GE + ++K ++VTN NI YA Sbjct: 15 VRMCLASAFSLGAMAPAFAQAP-TALVPTRTIYPGETITPEQVKPVEVTNPNISAGYASD 73 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+++++ LLP IP++ L P ++ RG V+++ GNMT+ +G +SD S+G Sbjct: 74 ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 +V+ V+NID+GVMVSG+V+ GT++V+ K Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162 >gi|148360444|ref|YP_001251651.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila str. Corby] gi|296106491|ref|YP_003618191.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila 2300/99 Alcoy] gi|148282217|gb|ABQ56305.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila str. Corby] gi|295648392|gb|ADG24239.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila 2300/99 Alcoy] gi|307609702|emb|CBW99212.1| hypothetical protein LPW_09931 [Legionella pneumophila 130b] Length = 233 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 76/150 (50%), Gaps = 4/150 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ ++LY+ ++F SV +V + G ++ S + + ++ ++ Y Sbjct: 87 IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ + Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++GD + VKN+ + ++ V TV+V+ Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVI 232 >gi|54293884|ref|YP_126299.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila str. Lens] gi|53753716|emb|CAH15174.1| hypothetical protein lpl0940 [Legionella pneumophila str. Lens] Length = 233 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 75/150 (50%), Gaps = 4/150 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ ++LY+ ++F SV +V + G ++ S + + ++ ++ Y Sbjct: 87 IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 K+++GLV + + P+ + + ++ +G +V II N+T+S G+A+ + Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGVAMDEG 202 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++GD + VKN+ + ++ V TV+V Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVT 232 >gi|52841143|ref|YP_094942.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296929|ref|YP_123298.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella pneumophila str. Paris] gi|52628254|gb|AAU26995.1| flagella basal body P-ring formation protein FlgA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750714|emb|CAH12121.1| hypothetical protein lpp0970 [Legionella pneumophila str. Paris] Length = 233 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 4/150 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ ++LY+ ++F SV +V + G ++ S + + ++ ++ Y Sbjct: 87 IKCLEENNHWTLYIPVKITIFKSV----LVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ + Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++GD + VKN+ + ++ V TV+V Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVT 232 >gi|315121846|ref|YP_004062335.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495248|gb|ADR51847.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 149 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 103/149 (69%), Positives = 122/149 (81%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R YV L+++ A+ +G AVVPSVVINAGEVL+E +LKE+ VTNSN+RGNYA Sbjct: 1 MRLFQVCLFYVFCLNAVLANGLGRAVVPSVVINAGEVLSELKLKELDVTNSNLRGNYARY 60 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 IKDV GLVTRR LLPD +I LS LHRPYVISRG KVRIIL QGNMTIS AG+ALSDAS+G Sbjct: 61 IKDVKGLVTRRTLLPDRIILLSALHRPYVISRGDKVRIILNQGNMTISAAGVALSDASVG 120 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 D I+VKNIDTGV+VSGS +D GTVR+++K Sbjct: 121 DAISVKNIDTGVIVSGSALDAGTVRIIIK 149 >gi|2275162|gb|AAB81414.1| FlgA [Sinorhizobium meliloti] Length = 168 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 1/149 (0%) Query: 5 RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 R +LF ++ L A AV+P I GE L+ S L+ + VTN ++R Y HS Sbjct: 20 RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVHS 79 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++G Sbjct: 80 IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 139 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 D+I V+N+DTGV+VSG+V+ T+ VV K Sbjct: 140 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 168 >gi|218672800|ref|ZP_03522469.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli GR56] Length = 163 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 95/146 (65%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 ++ + + + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI Sbjct: 18 AAMIAVAGIVMPAGATPGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQ 77 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 V GLV++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G +I Sbjct: 78 VEGLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLI 137 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVVK 152 +N+D+GV+VSG+V+ GTV V K Sbjct: 138 RARNMDSGVIVSGTVLADGTVHVRAK 163 >gi|209547929|ref|YP_002279846.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533685|gb|ACI53620.1| flagella basal body P-ring formation protein FlgA [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 160 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 58/130 (44%), Positives = 91/130 (70%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A +I V GLV++R LLP I Sbjct: 31 AGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLSGDFAKTISQVEGLVSKRTLLPGRTI 90 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ Sbjct: 91 SVSGLREPYTVTRGSSIRLVFSLGAMTISAAGSPLEDGATGQLIRARNMDSGVIVSGTVL 150 Query: 143 DTGTVRVVVK 152 GTV V K Sbjct: 151 ADGTVHVRAK 160 >gi|15964416|ref|NP_384769.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium meliloti 1021] gi|17380481|sp|Q52947|FLGA_RHIME RecName: Full=Flagellar protein flgA; Flags: Precursor gi|15073593|emb|CAC45235.1| Flagellar precursor transmembrane protein [Sinorhizobium meliloti 1021] Length = 168 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 5 RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 R +LF ++ L A AV+P I GE L+ S L+ + VTN ++R Y S Sbjct: 20 RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRS 79 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++G Sbjct: 80 IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 139 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 D+I V+N+DTGV+VSG+V+ T+ VV K Sbjct: 140 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 168 >gi|190890364|ref|YP_001976906.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|190695643|gb|ACE89728.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 160 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 96/146 (65%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 ++ + + + + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI Sbjct: 15 AAMIAVAGIMVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQ 74 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 V GLV++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G +I Sbjct: 75 VEGLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPLEDGATGQLI 134 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVVK 152 +N+D+GV+VSG+V+ GTV V K Sbjct: 135 RARNMDSGVIVSGTVLADGTVHVRAK 160 >gi|307311558|ref|ZP_07591199.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti BL225C] gi|307318913|ref|ZP_07598344.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti AK83] gi|306895327|gb|EFN26082.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti AK83] gi|306899575|gb|EFN30204.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium meliloti BL225C] Length = 157 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 5 RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 R +LF ++ L A AV+P I GE L+ S L+ + VTN ++R Y S Sbjct: 9 RAVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRS 68 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++G Sbjct: 69 IDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVG 128 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 D+I V+N+DTGV+VSG+V+ T+ VV K Sbjct: 129 DLIRVRNVDTGVIVSGTVMADSTIHVVAK 157 >gi|86356313|ref|YP_468205.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli CFN 42] gi|86280415|gb|ABC89478.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 160 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 96/142 (67%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 ++ + L + + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V GL Sbjct: 19 AIAGMVLPADADAGMGYAVVPTTIIYPGDTLSGSQLQEVEVTNPNLAGDYAKSISQVEGL 78 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 V++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G V+ +N Sbjct: 79 VSKRTLLPGRTISVSALREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQVVRARN 138 Query: 131 IDTGVMVSGSVVDTGTVRVVVK 152 +D+GV+VSG+V+ GT+ V K Sbjct: 139 MDSGVIVSGTVLADGTIHVRAK 160 >gi|150395486|ref|YP_001325953.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium medicae WSM419] gi|150027001|gb|ABR59118.1| SAF domain protein [Sinorhizobium medicae WSM419] Length = 169 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGH-AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 VR +L ++ L A AV+P I GE L+ S L+ + VTN ++R Y Sbjct: 20 VRAVLLAAVASCMLPPASALAEKPTAVIPKQTIYPGETLDASMLEVVDVTNPDLRDGYVR 79 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S+ +V G+VT+R LLP VI S L Y + RG+ VRI+ + G +TI+ AG L D +I Sbjct: 80 SLDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRIVFSNGGLTITAAGSPLQDGAI 139 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 G++I V+NIDTGV+VSG+V+ T+ VV K Sbjct: 140 GELIRVRNIDTGVIVSGTVMADSTIHVVAK 169 >gi|159184363|ref|NP_353578.2| flagellar basal body P-ring biosynthesis protein FlgA [Agrobacterium tumefaciens str. C58] gi|3913663|sp|Q44339|FLGA_AGRT5 RecName: Full=Flagellar protein flgA; Flags: Precursor gi|1086562|gb|AAB68969.1| orfA; No significant homologies in the database; Method: conceptual translation supplied by author [Agrobacterium tumefaciens] gi|2459715|gb|AAB71791.1| FlgA [Agrobacterium tumefaciens] gi|159139677|gb|AAK86363.2| flagellar protein FLGA precursor [Agrobacterium tumefaciens str. C58] Length = 162 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 1/149 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 VR L S + L + + A+VP I GE ++ ++K ++VTN NI YA Sbjct: 15 VRMCLA-SAFSLGALAPALAQAPMALVPVRTIYPGEAISPEQVKSVEVTNPNISAGYASD 73 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +V G+++++ LLP IP++ L P ++ RG V+++ GNMT+ +G +SD S+G Sbjct: 74 ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 +V+ V+NID+GVMVSG+V+ GT++V+ K Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162 >gi|227820859|ref|YP_002824829.1| flagellar basal body P-ring biosynthesis protein FlgA [Sinorhizobium fredii NGR234] gi|227339858|gb|ACP24076.1| SAF domain protein [Sinorhizobium fredii NGR234] Length = 169 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 56/126 (44%), Positives = 81/126 (64%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AV+P +I GE + S L+ + VTN ++ Y S+++V G VT+R LLP VI S Sbjct: 44 TAVIPKQIIYPGETIEASMLEVVDVTNPDLADGYIGSLEEVEGKVTKRTLLPGRVILASA 103 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L Y + RG+ VR+I G +TI+ AG L DA++G++I +NID+GV+VSG+V+ GT Sbjct: 104 LRDRYAVERGSTVRLIFNNGGLTITAAGSPLEDAAVGELIRARNIDSGVIVSGTVMADGT 163 Query: 147 VRVVVK 152 V VV K Sbjct: 164 VHVVAK 169 >gi|222084866|ref|YP_002543395.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722314|gb|ACM25470.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 166 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 60/150 (40%), Positives = 101/150 (67%), Gaps = 3/150 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 V F FS +D + +G AVVP+ VI G+++ +L+E+ VTN N+ G+YA Sbjct: 20 SVMFAPAFSAGATGVD---GTGMGTAVVPTEVIYPGDIIGSGQLEEVDVTNPNLSGDYAR 76 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +I+DV G V++R LLP I +S L +P+ ++RG+ R++++ G+MTI+ AG L D ++ Sbjct: 77 TIRDVTGRVSKRTLLPGRTISISALRQPFAVTRGSNARLVMSMGSMTITAAGTPLDDGAV 136 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 GD + +N+D+G++V+G+V++ GT+RVV K Sbjct: 137 GDSVRARNLDSGIIVNGTVLENGTIRVVSK 166 >gi|241203107|ref|YP_002974203.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856997|gb|ACS54664.1| flagella basal body P-ring formation protein FlgA [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 160 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 58/130 (44%), Positives = 91/130 (70%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V++R LLP I Sbjct: 31 AGMGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTI 90 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +S L Y ++RG+ +R++L+ G +TIS AG L D + G V+ +N+D+GV+VSG+V+ Sbjct: 91 SVSGLREAYTVTRGSSIRLVLSFGALTISAAGTPLEDGTTGQVVRARNMDSGVIVSGTVL 150 Query: 143 DTGTVRVVVK 152 GTV V K Sbjct: 151 ADGTVHVRAK 160 >gi|116250483|ref|YP_766321.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium leguminosarum bv. viciae 3841] gi|115255131|emb|CAK06205.1| putative flagellar protein FlgA precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 160 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 60/130 (46%), Positives = 92/130 (70%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V++R LLP I Sbjct: 31 AGMGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMVSKRTLLPGRTI 90 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +S L Y ++RG+ +R++L+ G MTIS AG L D +IG V+ +N+D+GV+VSG+V+ Sbjct: 91 SVSGLREAYTVTRGSSIRLVLSLGAMTISAAGTPLEDGTIGQVVRARNMDSGVIVSGTVL 150 Query: 143 DTGTVRVVVK 152 GTV V K Sbjct: 151 ADGTVHVRAK 160 >gi|77166141|ref|YP_344666.1| flageller protein FlgA [Nitrosococcus oceani ATCC 19707] gi|254435735|ref|ZP_05049242.1| SAF domain family [Nitrosococcus oceani AFC27] gi|76884455|gb|ABA59136.1| flagellar protein FlgA [Nitrosococcus oceani ATCC 19707] gi|207088846|gb|EDZ66118.1| SAF domain family [Nitrosococcus oceani AFC27] Length = 235 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ S+ +V G +V + I++G L+ L+ + S +R Y + VG Sbjct: 98 WTVYL----SVKMAVYGKVLVATHSISSGFPLSLVDLRLERRDLSELRQGYLNEPAQAVG 153 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I +L P +I RG +V ++ T + ++ G AL DA G+ I V+ Sbjct: 154 KRLKRPVGLGAIITPGMLEIPKLIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVR 213 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + +V G+V G V+V + Sbjct: 214 NTSSRRIVEGTVTAAGLVQVQM 235 >gi|330501133|ref|YP_004378002.1| SAF domain-containing protein [Pseudomonas mendocina NK-01] gi|328915419|gb|AEB56250.1| SAF domain-containing protein [Pseudomonas mendocina NK-01] Length = 234 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+ L S+F V V + VI G+ ++ +L+ +V + +S +VVG Sbjct: 96 WSVTALVQASVFLPV----VHAARVIERGQTISAEQLQLQEVNIGKAPRGFYNSFDEVVG 151 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I ++L P +I RG +V I+ +Q ++ S G AL++ GDVI V+ Sbjct: 152 QGAKRRVRAGQLIAPNLLTAPLLIRRGQQVTIVASQDGISASATGEALANGREGDVIRVR 211 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ + ++ VV+ G V Sbjct: 212 NLGSQKVIEAQVVEDGVV 229 >gi|222147572|ref|YP_002548529.1| flagellar protein FLGA precursor [Agrobacterium vitis S4] gi|221734560|gb|ACM35523.1| flagellar protein FLGA precursor [Agrobacterium vitis S4] Length = 159 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 58/126 (46%), Positives = 91/126 (72%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +A+VP+ I GE ++ ++L +QVTN N+ G +A + DVVG+++ + LLP IPL+ Sbjct: 34 YAIVPTDTIYPGEAISSNKLDRVQVTNPNLAGGFASDMADVVGMLSTKTLLPGRTIPLAT 93 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L RPY + RG+++R+I GN+TIS +G + DA+IGDVI V+N+D+G +VSG+V+ GT Sbjct: 94 LKRPYAVIRGSQLRLIFNIGNLTISASGSPMDDANIGDVIRVRNLDSGQIVSGTVMGDGT 153 Query: 147 VRVVVK 152 V+V+ K Sbjct: 154 VQVMAK 159 >gi|327478805|gb|AEA82115.1| SAF domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 267 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++L V S S++ AV +I G+ L L+ + + Y H +++V G Sbjct: 130 WTLEVTSQPSVWLP----AVHAQGIIERGQTLGRDDLRLEPINIGKAQRGYFHRLEEVQG 185 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + +R + + S+L +P + RG V+I+ + + ST G AL+D G+VI V+ Sbjct: 186 MAAKRRIRAGQTLTPSLLAQPLAVRRGQPVKIVASHDGIEASTNGEALADGQPGEVIRVR 245 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ +G ++ VV+ G V Sbjct: 246 NVRSGKVIDAKVVEEGVV 263 >gi|157147106|ref|YP_001454425.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter koseri ATCC BAA-895] gi|157084311|gb|ABV13989.1| hypothetical protein CKO_02883 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V V+ + G+VL+ S + ++ S+ RGNY + +G Sbjct: 122 WDVAVTVKPDVYLPV----VIAKNSLERGQVLSASDVSIKKLNISSTRGNYLTDPDEAIG 177 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L +R + I L+ L P ++ RG +V +I QG + T G A+ G++I VK Sbjct: 178 LTVKRRIRELQPITLTQLESPVLVERGQRVLMIAEQGGVEARTMGEAMKKGRKGEMIKVK 237 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + +VS V D G V++V Sbjct: 238 NESSERVVSAIVADAGVVKMVY 259 >gi|300113144|ref|YP_003759719.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus watsonii C-113] gi|299539081|gb|ADJ27398.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus watsonii C-113] Length = 235 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ S+ +V G +V + I++G LN + ++ + S +R Y + VG Sbjct: 98 WTVYL----SVKMAVYGKVLVATHSISSGFPLNLADMRLERRDLSELRQGYLNEPAQAVG 153 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I +L P +I RG +V ++ + ++ G AL DA G+ I V+ Sbjct: 154 KRLKRPVGLGAIITPGMLETPKLIRRGQQVILMAKVPGLRVNMKGQALEDAGAGEHIRVR 213 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + +V G+V G V+V + Sbjct: 214 NTSSQRIVEGTVTAAGLVQVQM 235 >gi|163758016|ref|ZP_02165104.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea phototrophica DFL-43] gi|162284305|gb|EDQ34588.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea phototrophica DFL-43] Length = 160 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 53/127 (41%), Positives = 77/127 (60%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G AVVP I GE L+ ++E+ VTN N+RG Y + V+G VT R LLP IP Sbjct: 34 GTAVVPERTIYPGEELSAELVREVTVTNPNLRGGYVTTTTGVLGKVTTRTLLPGRTIPAG 93 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 VL + + RG V ++ + +TI+ AG L + ++GD I V+NI++GV VSG+V+ G Sbjct: 94 VLRDAWAVERGTTVELVFSGKGLTITAAGTPLQNGAVGDFIRVRNIESGVTVSGTVMADG 153 Query: 146 TVRVVVK 152 T++V K Sbjct: 154 TIQVAPK 160 >gi|292490649|ref|YP_003526088.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus halophilus Nc4] gi|291579244|gb|ADE13701.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus halophilus Nc4] Length = 221 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ S+ +V G VV + + G L+ + + + +R Y V G Sbjct: 84 WTVYL----SVKVAVYGKVVVATHPLVPGSPLSLADIHLERRNLEQLRQGYLRDPAQVAG 139 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R L VI VL P ++ RG +V +I + + G AL DA G+ I V+ Sbjct: 140 KRLKRPLGLGAVITPEVLEIPKLVRRGQQVILIAKVPGLQVHMKGQALEDAGAGEHIRVR 199 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + +V G+V G V+V + Sbjct: 200 NNSSQRIVEGTVTADGIVQVQM 221 >gi|291085839|ref|ZP_06354200.2| putative flagellar protein [Citrobacter youngae ATCC 29220] gi|291070006|gb|EFE08115.1| putative flagellar protein [Citrobacter youngae ATCC 29220] Length = 260 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 63/134 (47%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ V V+P +I V+ L+ + SN R ++ + +GL ++R L Sbjct: 125 VAVRPDVSIPVVMPKSLIARDTVITADDLQLKKFNISNQREGLMTNMDEAIGLTSKRALQ 184 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P I S L P ++ R V I+ +T S G+AL + G+VI ++N + ++ Sbjct: 185 PGKPITRSELVLPVLVKRDQPVMIVSHMAGITASMPGVALKNGRKGEVIKIRNSSSQRII 244 Query: 138 SGSVVDTGTVRVVV 151 SG V DTG V + Sbjct: 245 SGVVDDTGVVTTLA 258 >gi|254497119|ref|ZP_05109939.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella drancourtii LLAP12] gi|254353657|gb|EET12372.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella drancourtii LLAP12] Length = 246 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C +SLYV ++ +V + + GE ++ + + ++ ++ Y Sbjct: 100 IKCQEQDNHWSLYVPIRVTILKTV----YIARRALMKGEHISGHDMYQAEIDVHKLKNGY 155 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 I ++VG V ++ + + + P V+ +G KV I+ N+T+S GIA++D Sbjct: 156 FEDIDELVGRVCKQNIAINSPFNPHNIELPKVVRKGEKVAIVTNNNNLTVSMDGIAINDG 215 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++G+ I VKN+ + ++ V V VV Sbjct: 216 AMGETIKVKNLVSKRIIEAQVAGKKRVTVV 245 >gi|182680547|ref|YP_001834693.1| flagellar basal body P-ring biosynthesis protein-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636430|gb|ACB97204.1| Flagellar basal body P-ring biosynthesis protein-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 166 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 6/155 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAV----VPSVVINAGEVLNESRLKEMQV--TNS 54 + +RFL LS S V VP+ I G+ + E+ + E + ++ Sbjct: 9 ISSLRFLPLGVAACLSTLSAVHPVEASDALVLPVPTTTIYPGDTIKEAWIIEREFAANST 68 Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 RGN +VG RR LLP IP++ L P + GAKVRI+ + +TI+ G Sbjct: 69 YARGNVLTERAALVGKAARRTLLPGVPIPINALSEPKAVLNGAKVRIVFMESGLTITAFG 128 Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 AL S+GD ++V+N+D+G+ VSG V G++RV Sbjct: 129 SALQSGSVGDNVSVRNLDSGLTVSGIVQADGSIRV 163 >gi|319405402|emb|CBI79021.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp. AR 15-3] Length = 152 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 2/136 (1%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTR 73 L + +A I +VP I AG+ +++ L E S+ Y +K ++ V + Sbjct: 16 CLLTAAYADRISF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAASLYVMDMKQILHKVAK 74 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 R L I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+ Sbjct: 75 RTLTAGRPISLSSLGDPVLVERGQATKLIFQAHNLQITALGVVLQSGSSGDVIRVRNSDS 134 Query: 134 GVMVSGSVVDTGTVRV 149 G +V+G+V+ G VRV Sbjct: 135 GRVVTGTVLQNGDVRV 150 >gi|289208108|ref|YP_003460174.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio sp. K90mix] gi|288943739|gb|ADC71438.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio sp. K90mix] Length = 244 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + +S+YV +A V +V S + + L+ ++ S G+Y S + Sbjct: 104 PVSWSIYVPVTVERYAEV----LVASRTLRRQHTILPGDLRTKRIQTSRHAGSYFESKNE 159 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VGL TRR + ++ + + V+SRG +V I+ G++ I G AL + +GD I Sbjct: 160 LVGLQTRRNIRSGQILGQQHVTQREVVSRGQRVTILAENGSVVIRMQGEALENGILGDRI 219 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 VKN +G +V G V+++G VRV Sbjct: 220 RVKNSSSGRVVEGEVLESGHVRVA 243 >gi|238762363|ref|ZP_04623334.1| Flagella basal body P-ring formation protein FlgA [Yersinia kristensenii ATCC 33638] gi|238699348|gb|EEP92094.1| Flagella basal body P-ring formation protein FlgA [Yersinia kristensenii ATCC 33638] Length = 249 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V V + G+++ ++ + S +G Y + ++VG Sbjct: 108 WEVSVTVKPDIYLPVW----VAKSTLERGKLVAPDDIELKKKNISTAQGGYITNPDEIVG 163 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L +R + V+ S L +P +++RG +V +I Q + G AL + G++I VK Sbjct: 164 LTVKRRIRGLQVVTPSQLEQPVLVTRGQQVLMIAEQEGIEARMLGEALKNGRKGELIKVK 223 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N+ + V+ V D VR++ Sbjct: 224 NLSSKRTVTAIVDDIARVRML 244 >gi|318604248|emb|CBY25746.1| flagellar basal-body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica Y11] Length = 234 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V V + G+++ ++ + S +G Y ++VG Sbjct: 93 WEVAVTVKPDIYLPVW----VAKNTLERGKLVAPDDIELKKKNISTAQGGYITDPDEIVG 148 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ S L +P +++RG +V +I Q + G AL + G++I VK Sbjct: 149 FTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVK 208 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI + V+ V D VR++ Sbjct: 209 NISSKRTVTAMVDDVAKVRML 229 >gi|319898638|ref|YP_004158731.1| flagella basal body P-ring formation protein FlgA [Bartonella clarridgeiae 73] gi|319402602|emb|CBI76147.1| Flagella basal body P-ring formation protein FlgA [Bartonella clarridgeiae 73] Length = 152 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLL 77 + +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L Sbjct: 20 TAYADRIGF-LVPDKSIYAGQRISDIGLSERHFFIKSDAASLYVTDMKQILHKVAKRTLT 78 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V Sbjct: 79 AGRPIALSSLGDPVLVERGQATKLIFQTHNLKITALGVVLQSGSSGDVIRVRNSDSGRVV 138 Query: 138 SGSVVDTGTVRV 149 +G+V+ G VRV Sbjct: 139 TGTVLQNGDVRV 150 >gi|238752870|ref|ZP_04614335.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei ATCC 43380] gi|238708909|gb|EEQ01162.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei ATCC 43380] Length = 215 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V V + G+V+ S ++ + S +G+Y + ++VG Sbjct: 74 WEVAVTVKPDIYLPVW----VAKNTLERGKVVAPSDIELKKKNISAAQGSYITNPDEIVG 129 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + ++ + L +P +++RG V +I Q + G AL + G++I VK Sbjct: 130 FTVKRRIRNLQIVTSAQLEQPVLVTRGQHVVMIAEQDGIEARMLGEALKNGRKGELIKVK 189 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N+ + +S V D G VR++ Sbjct: 190 NLSSKRTISAIVEDIGKVRML 210 >gi|108809059|ref|YP_652975.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Antiqua] gi|108810744|ref|YP_646511.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Nepal516] gi|167398491|ref|ZP_02304015.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|21960413|gb|AAM87006.1|AE013948_14 putative flagellar protein [Yersinia pestis KIM 10] gi|45437658|gb|AAS63208.1| putative flagellar protein [Yersinia pestis biovar Microtus str. 91001] gi|108774392|gb|ABG16911.1| flagella basal body P-ring formation protein [Yersinia pestis Nepal516] gi|108780972|gb|ABG15030.1| putative flagella basal body P-ring formation protein [Yersinia pestis Antiqua] gi|167050995|gb|EDR62403.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 305 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 166 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 225 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 226 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 285 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 286 VVTATVDGSGRVRML 300 >gi|145597813|ref|YP_001161889.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Pestoides F] gi|145209509|gb|ABP38916.1| flagella basal body P-ring formation protein [Yersinia pestis Pestoides F] Length = 305 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 166 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 225 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 226 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 285 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 286 VVTATVDGSGRVRML 300 >gi|146281765|ref|YP_001171918.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas stutzeri A1501] gi|145569970|gb|ABP79076.1| flagella basal body P-ring formation protein FlgA [Pseudomonas stutzeri A1501] Length = 250 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S++V + L+ VI V + + L+E+ + + SN+ Y + +V+G Sbjct: 113 WSVFVPAQVRLYRQVI----VANRSLLRDSRLSEADVSLAERDVSNLTQGYLTRMDEVLG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + PD VI + + V+ +G +V I G + + G A++D + G I VK Sbjct: 169 NKLTRPVQPDQVIAPNQMELAEVVRKGDQVVITARSGAINVRMPGEAMADGAPGKQIPVK 228 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N +G +V V+ G V V + Sbjct: 229 NQRSGRVVKARVIGPGHVEVAM 250 >gi|192358836|ref|YP_001982407.1| putative flagella basal body P-ring formation protein FlgA [Cellvibrio japonicus Ueda107] gi|190685001|gb|ACE82679.1| putative flagella basal body P-ring formation protein FlgA [Cellvibrio japonicus Ueda107] Length = 256 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++L++ + S+F S+ V + GE ++ S ++ + S +R +Y K+++G Sbjct: 120 WTLHIPAQVSVFRSIP----VAMRDLARGEQISASDIQWETINISLLRQSYLLETKEIIG 175 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L +R + + L P VI RG V + + G + +S +G AL+D +G I V+ Sbjct: 176 LEVKRNIGLGSPFLSASLDAPKVIYRGETVDLESSVGGINVSASGTALADGRLGQKIRVR 235 Query: 130 NIDTGVMVSGSVVDTGTV 147 N + +V+G+VV +G V Sbjct: 236 NNQSDRVVTGTVVASGKV 253 >gi|332162905|ref|YP_004299482.1| flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667135|gb|ADZ43779.1| Flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863355|emb|CBX73478.1| hypothetical protein YEW_ES20730 [Yersinia enterocolitica W22703] Length = 234 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V V + G+++ ++ + S +G Y ++VG Sbjct: 93 WEVAVTVKPDIYLPVW----VAKNTLERGKLVVPDDIELKKKNISTAQGGYITDPDEIVG 148 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ S L +P +++RG +V +I Q + G AL + G++I VK Sbjct: 149 FTVKRRIRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVK 208 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI + V+ V D VR++ Sbjct: 209 NISSKRTVTAMVDDVAKVRML 229 >gi|319406977|emb|CBI80614.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp. 1-1C] Length = 152 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLL 77 + +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L Sbjct: 20 AAYADRIGF-LVPDKSIYAGQRISDIGLSEKHFFIKSDAVSLYVTDMKQILHKVAKRTLT 78 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V Sbjct: 79 AGRPISLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQSGSSGDVIRVRNSDSGRVV 138 Query: 138 SGSVVDTGTVRV 149 +G+V+ G VRV Sbjct: 139 TGTVLQNGDVRV 150 >gi|126668330|ref|ZP_01739289.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp. ELB17] gi|126627247|gb|EAZ97885.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp. ELB17] Length = 263 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S + G A+V S + GE L + V + R + ++G+ RR + Sbjct: 131 SATVDIHGPALVASRPLARGERLRADMVSLQTVVVNASRRGTIAEAQSIIGMEVRRPINS 190 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 +I +L P + RG V I + G+ T+S+ G AL++A+IG+ + V+N+ + + Sbjct: 191 GSLITPDLLAAPDAVERGDHVMITASSGSFTVSSRGKALANAAIGEQVLVENLQSSRTIK 250 Query: 139 GSVVDTGTVRVVV 151 G V G V++ + Sbjct: 251 GRVTAPGQVQIPM 263 >gi|254785365|ref|YP_003072794.1| flagella basal body P-ring formation protein FlgA [Teredinibacter turnerae T7901] gi|237683904|gb|ACR11168.1| flagella basal body P-ring formation protein FlgA [Teredinibacter turnerae T7901] Length = 228 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV F V V+ + I G + + ++ S++ G Y VVG Sbjct: 90 WTIYVPVQVETFEEV----VIAAGAIGRGAQITAGDVVTQRMNTSHLTGGYLRDPARVVG 145 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L RR+L P +I L+ + P V+ +G V + + + T AL++ +G+ I V+ Sbjct: 146 LEARRMLRPGEIIKLNQVKAPDVVKKGQTVVLEARSSALRVVTEATALTNGGVGEQIKVR 205 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + +V V GTVRV Sbjct: 206 NNRSQRIVDAQVTGPGTVRVA 226 >gi|163750576|ref|ZP_02157814.1| flagellar basal body P-ring biosynthesis protein [Shewanella benthica KT99] gi|161329731|gb|EDQ00720.1| flagellar basal body P-ring biosynthesis protein [Shewanella benthica KT99] Length = 234 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + G+++ + + V + +RG ++ Sbjct: 100 WQIFISVRVDILYPV--------VVARATLGPGDLITKGDIVIKYVEQTLLRGRQFSNLD 151 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +VVG +R + P+ I + L + +G V II N I T G AL D ++GD Sbjct: 152 EVVGTRAKRRIAPNQPIFSNNL---CFVCKGDSVSIIARTENFQIKTVGEALQDGNLGDR 208 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + V+ V+D G V V + Sbjct: 209 IRIKNTYSNKRVNARVIDVGKVEVRM 234 >gi|146305246|ref|YP_001185711.1| SAF domain-containing protein [Pseudomonas mendocina ymp] gi|145573447|gb|ABP82979.1| SAF domain protein [Pseudomonas mendocina ymp] Length = 281 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 66/131 (50%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + + ASV AV + VI G+ + +++ +V + S+ +VVG +R + Sbjct: 146 VALVQASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSSRGFYSSLDEVVGQGAKRRI 205 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 +I S+L P ++ RG +V I+ Q ++ S G AL + G+VI V+N+ + + Sbjct: 206 RAGALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKV 265 Query: 137 VSGSVVDTGTV 147 + VV+ G V Sbjct: 266 IEAQVVEEGVV 276 >gi|121997325|ref|YP_001002112.1| SAF domain-containing protein [Halorhodospira halophila SL1] gi|121588730|gb|ABM61310.1| SAF domain [Halorhodospira halophila SL1] Length = 262 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV +L + VV + + G+ ++ L+ IRG + ++G Sbjct: 124 WTVYVRMETTLKTEM----VVATRNLRRGQRVSAGDLRTATRDARRIRGEFYRDPAPLIG 179 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN-MTISTAGIALSDASIGDVIAV 128 RR L I + + P ++ R +V I G + IS+ G AL G+ I V Sbjct: 180 QAVRRSLREGAAITGNHVQPPRLVERNDRVTITAGNGGAIQISSRGRALEHGQEGERIRV 239 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 +N+D+G + VV G VRV Sbjct: 240 ENLDSGREIQARVVGEGQVRV 260 >gi|153950687|ref|YP_001399630.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 31758] gi|152962182|gb|ABS49643.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 31758] Length = 272 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 133 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 192 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 193 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 252 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 253 VVTATVDGSGRVRML 267 >gi|150260253|ref|ZP_01916981.1| lateral flagellar P-ring addition protein [Yersinia pestis CA88-4125] gi|162419782|ref|YP_001604851.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Angola] gi|165925092|ref|ZP_02220924.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165939099|ref|ZP_02227651.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|166008979|ref|ZP_02229877.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166211927|ref|ZP_02237962.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|167418801|ref|ZP_02310554.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425137|ref|ZP_02316890.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466345|ref|ZP_02331049.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis FV-1] gi|229837404|ref|ZP_04457567.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Pestoides A] gi|229840617|ref|ZP_04460776.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842832|ref|ZP_04462984.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. India 195] gi|229900941|ref|ZP_04516065.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Nepal516] gi|294502784|ref|YP_003566846.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Z176003] gi|149289661|gb|EDM39738.1| lateral flagellar P-ring addition protein [Yersinia pestis CA88-4125] gi|162352597|gb|ABX86545.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Angola] gi|165913055|gb|EDR31680.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|165923292|gb|EDR40443.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992318|gb|EDR44619.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206673|gb|EDR51153.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|166962795|gb|EDR58816.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055900|gb|EDR65681.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682280|gb|EEO78372.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Nepal516] gi|229690099|gb|EEO82156.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. India 195] gi|229696983|gb|EEO87030.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705527|gb|EEO91537.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis Pestoides A] gi|262360816|gb|ACY57537.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis D106004] gi|262364761|gb|ACY61318.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis D182038] gi|294353243|gb|ADE63584.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Z176003] gi|320016715|gb|ADW00287.1| Flagellar basal-body P-ring formation proteinflgA [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 282 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 143 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 202 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 203 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 262 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 263 VVTATVDGSGRVRML 277 >gi|212634342|ref|YP_002310867.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella piezotolerans WP3] gi|212555826|gb|ACJ28280.1| Flagellar basal-body P-ring formation protein FlgA [Shewanella piezotolerans WP3] Length = 237 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + G++L+ S ++ V + +RG + Sbjct: 103 WQIFLSVRVDILYPV--------VVAKSTLGPGDLLSSSDVEIDYVEQTTLRGQQFDQVD 154 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 VVG +R + P I + L ++ +G V I N I T G AL D ++GD Sbjct: 155 QVVGARLKRRVAPQQPIFNNHL---CIVCKGDTVSIFARSENFEIKTVGEALHDGNLGDK 211 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + ++ V G V V + Sbjct: 212 IRIKNTHSQKTLNAKVTAVGQVEVRM 237 >gi|170022967|ref|YP_001719472.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis YPIII] gi|186896775|ref|YP_001873887.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis PB1/+] gi|51590923|emb|CAH22579.1| Putative flagella basal body P-ring formation protein [Yersinia pseudotuberculosis IP 32953] gi|169749501|gb|ACA67019.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis YPIII] gi|186699801|gb|ACC90430.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis PB1/+] Length = 272 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 133 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 192 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 193 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 252 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 253 VVTATVDGSGRVRML 267 >gi|288940403|ref|YP_003442643.1| flagella basal body P-ring formation protein FlgA [Allochromatium vinosum DSM 180] gi|288895775|gb|ADC61611.1| flagella basal body P-ring formation protein FlgA [Allochromatium vinosum DSM 180] Length = 245 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 4/145 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + +SL+V + V VV I+ +V+ ++ + S + Y D Sbjct: 105 PVSWSLFVPARIERHLPV----VVLERPISRQQVIGPDDIRIERQAVSTLTNGYFTEASD 160 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VVGL +RR L+P V+ + + + ++ RG +V + + + + G AL + G+ I Sbjct: 161 VVGLASRRRLMPGQVLTSAHVTQRRIVERGQEVTLFSARPGLVVRMKGTALENGVEGERI 220 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151 V+N + +V G V +G VRV + Sbjct: 221 RVRNTSSKRIVEGYVEPSGAVRVAL 245 >gi|23092309|gb|AAN08634.1| FlgA [Aeromonas hydrophila] Length = 339 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LY+ S+ V S + G++L+E L + IRG+Y ++G Sbjct: 205 WDLYLPVRVSIQKP----YVTVSAPVAKGDILSEGMLTLAYQDQTLIRGDYLSDPTPLIG 260 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + ++R L P I L+ + V+ +G +V + +M I T AL D S GD+I + Sbjct: 261 VRSKRELKPGQPIRLTQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 317 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI +G V G V G V V Sbjct: 318 NIRSGKTVQGKVSAVGAVVVT 338 >gi|261341498|ref|ZP_05969356.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316] gi|288316294|gb|EFC55232.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316] Length = 261 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + + V ++ V ++ + G V+ S + + SN+R Y DVVG Sbjct: 120 WDIAVTVKPDIYLQV----LMAKNTLERGHVMTASDITRRKFNISNLRSGYITRPDDVVG 175 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L +R + + LS L P ++ RG +V +I Q + T GIA G++I VK Sbjct: 176 LTLKRRIRELQPLSLSQLDSPVMVERGQRVLMIADQDGVEARTMGIASKKGRKGEMIKVK 235 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + V+ V+D G VR Sbjct: 236 NESSEREVTAMVIDMGVVRT 255 >gi|311694437|gb|ADP97310.1| flagella basal body P-ring formation protein FlgA [marine bacterium HP15] Length = 222 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 63/135 (46%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + S+ G A+V + + GE + E L + V ++ R K +G+ RR + Sbjct: 88 FVTASVSIHGPALVAARPLTRGERITEGLLAKQSVEINSSRRGVITDSKQAIGMEVRRAV 147 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ +L P + RG V I G ++ + G AL+ AS+G+ + V+N+ + Sbjct: 148 NAGSLVTPDMLSAPNAVERGDHVIITAKTGGFSVRSRGKALASASVGEQVLVENLRSSRT 207 Query: 137 VSGSVVDTGTVRVVV 151 + SVV G V + + Sbjct: 208 IRASVVAPGHVEIPM 222 >gi|170725949|ref|YP_001759975.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella woodyi ATCC 51908] gi|169811296|gb|ACA85880.1| flagella basal body P-ring formation protein FlgA [Shewanella woodyi ATCC 51908] Length = 235 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + G++L+ + V +N+RG IK Sbjct: 101 WQIFLSVRVDILYPV--------VVARETLGPGDLLSNDDVIIEYVDRTNLRGQQFDDIK 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 VVG +R + P+ I S L + +G V I N+ I T G AL D ++GD Sbjct: 153 QVVGTRVKRRIPPNQPIFSSNL---CFVCKGDTVSIYARSANVVIKTVGEALRDGNLGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + + +V G V V + Sbjct: 210 IRIKNTHSNKSLHATVTGVGEVEVRM 235 >gi|157961165|ref|YP_001501199.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella pealeana ATCC 700345] gi|157846165|gb|ABV86664.1| SAF domain protein [Shewanella pealeana ATCC 700345] Length = 257 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + G++L ++ + SN+RG I Sbjct: 123 WQIFLSVRVDILYPI--------VVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEIS 174 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 VVG +R + P I + L ++ +G V I N I T G AL D ++GD Sbjct: 175 QVVGARLKRRVAPGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDK 231 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + + V G V V + Sbjct: 232 IRIKNSHSHKKLDARVTGVGQVEVRM 257 >gi|13472577|ref|NP_104144.1| flagellar basal body P-ring biosynthesis protein FlgA [Mesorhizobium loti MAFF303099] gi|14023323|dbj|BAB49930.1| flagellar protein; FlgA [Mesorhizobium loti MAFF303099] Length = 174 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++P+ VI GE + + LK++ + + + A +++ G + +R LLP IP + Sbjct: 49 VLIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAA 108 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + +++ +GA V++ G +TI+ + L S GD+I V+N D+G ++SG+V+ GT Sbjct: 109 IREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGT 168 Query: 147 VRVVV 151 ++V Sbjct: 169 IQVSA 173 >gi|323139655|ref|ZP_08074697.1| flagella basal body P-ring formation protein FlgA [Methylocystis sp. ATCC 49242] gi|322395087|gb|EFX97646.1| flagella basal body P-ring formation protein FlgA [Methylocystis sp. ATCC 49242] Length = 159 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGN-YA 61 VR FF + ++L + A V VP V I G+ + + L+E N Sbjct: 9 VRSFTFFVVASMTLTLVAARAQESQVPVPRVTIYPGDQITDQVLEEKNYRLPNGADALVF 68 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +VG V RR LLP IP + P+V+ GA+VRI+ ++G M I+T G+A + Sbjct: 69 LSRTGLVGKVARRTLLPGQPIPTIAVDNPHVVKVGAQVRIVFSEGGMQITTYGVAQQSGA 128 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +GDVI V+N ++G+ +SG V G++ V Sbjct: 129 VGDVIRVRNQESGLFISGRVQSDGSILV 156 >gi|149374965|ref|ZP_01892738.1| flagellar basal body P-ring biosynthesis protein [Marinobacter algicola DG893] gi|149360854|gb|EDM49305.1| flagellar basal body P-ring biosynthesis protein [Marinobacter algicola DG893] Length = 234 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 66/133 (49%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 + ++ G A+V + + GE L ++ ++ V ++IR +I+ +VG+ RR + Sbjct: 102 PVSVTITGDAMVAARPLGRGERLTKAAIRSDNVVVNSIRRGAITNIEQLVGMEMRRGVNT 161 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 V ++ P I RG V I GN ++++ G AL+ SIG+ + V+N+ + V Sbjct: 162 GTVFTPDLVLAPAAIERGDHVIISARSGNFSVNSRGKALASGSIGEQVLVENLSSSRTVR 221 Query: 139 GSVVDTGTVRVVV 151 V G V + + Sbjct: 222 ARVTAPGHVEIPM 234 >gi|161484755|ref|NP_670755.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis KIM 10] gi|161511337|ref|NP_994331.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|161760560|ref|YP_071832.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 32953] gi|218927908|ref|YP_002345783.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis CO92] gi|270487677|ref|ZP_06204751.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|115346519|emb|CAL19395.1| putative flagella basal body P-ring formation protein [Yersinia pestis CO92] gi|270336181|gb|EFA46958.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] Length = 237 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 63/135 (46%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + ++ + V + G + ++ + + ++G Y +++GL +R Sbjct: 98 VVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRR 157 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + S L +P +++R V ++ Q + GIA + G++I VKN+ +G Sbjct: 158 IRQLQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGR 217 Query: 136 MVSGSVVDTGTVRVV 150 +V+ +V +G VR++ Sbjct: 218 VVTATVDGSGRVRML 232 >gi|258622484|ref|ZP_05717506.1| Flagellar protein flgA precursor [Vibrio mimicus VM573] gi|262173350|ref|ZP_06041027.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|258585184|gb|EEW09911.1| Flagellar protein flgA precursor [Vibrio mimicus VM573] gi|261890708|gb|EEY36695.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] Length = 265 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ + + VV + E + S LK + T + + ++ + + V+GL T R + Sbjct: 133 VTIKSVLTLPVVVAKTTLRRDETIQASDLKIEKRTLTR-QEDFYTNTQQVIGLETTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ ++L ++ +G +V II ++ T +T GIAL G I V+N +G ++ Sbjct: 192 SGQIVSPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVI 251 Query: 138 SGSVVDTGTVRV 149 V D V Sbjct: 252 RAVVTDLNQVHT 263 >gi|119477961|ref|ZP_01618061.1| flagellar basal body P-ring biosynthesis protein [marine gamma proteobacterium HTCC2143] gi|119448874|gb|EAW30116.1| flagellar basal body P-ring biosynthesis protein [marine gamma proteobacterium HTCC2143] Length = 237 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 4/143 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +SLY+ +L+ V V + I G ++ L+ ++ S + G Y S V+ Sbjct: 99 LWSLYIPVDVNLYKPV----VTAIIPIAKGSIVTRESLEMREMNISKLTGTYFVSSDAVI 154 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G+ +R L + + + L +P +I RG V + GN+ + GIAL++ G I++ Sbjct: 155 GMQAKRPLRANAPVIATHLQQPLLIKRGESVVMTARSGNLVVKIPGIALTNGHRGQQISI 214 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 +N + +V G V G V +V+ Sbjct: 215 RNSQSKRIVEGKVSAQGQVMIVM 237 >gi|157376222|ref|YP_001474822.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sediminis HAW-EB3] gi|157318596|gb|ABV37694.1| SAF domain protein [Shewanella sediminis HAW-EB3] Length = 259 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V V+ VV + ++++ + V +++RG I+ Sbjct: 125 WQIFLSVRV--------DVLYPVVVSRETLGPDDLISSGDVAIQYVEQTSLRGQQFDKIE 176 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 DVVG +R + P+ I ++ L + +G V I N I T G AL D ++GD Sbjct: 177 DVVGTRVKRRIPPNQPIFINNL---CFVCKGDTVSIFARSKNFEIKTVGEALRDGNLGDR 233 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + + V G V V + Sbjct: 234 IRIKNSYSNKSLDAKVTGVGEVEVRM 259 >gi|1272364|gb|AAA97472.1| LfgA [Vibrio parahaemolyticus] Length = 235 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ ++LK T S ++ K +GL T R L Sbjct: 103 VTIKSSVTLPVVVAATTVGRSEVVTANQLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 161 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 162 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 221 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 222 RAVVTGRNQVHT 233 >gi|145298485|ref|YP_001141326.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas salmonicida subsp. salmonicida A449] gi|142851257|gb|ABO89578.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas salmonicida subsp. salmonicida A449] Length = 339 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LY+ S+ V + + G++L+ES L + IRG+Y ++G Sbjct: 205 WDLYLPVRVSIQKP----YVTVATPVAKGDILSESVLTLAYQDQTQIRGDYLSDQAPLIG 260 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + ++R L P I LS + V+ +G +V + +M I T AL D S GD+I++ Sbjct: 261 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMISLV 317 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 NI +G V G V G+V V Sbjct: 318 NIRSGKTVQGKVSAVGSVVV 337 >gi|327480014|gb|AEA83324.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas stutzeri DSM 4166] Length = 215 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S++V + L+ VI V + + VL+++ + + S + Y + + +G Sbjct: 78 WSVFVPAQVRLYREVI----VANRSLLRDTVLSQADVSLAERDVSALNQGYLTRMDEALG 133 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + PD VI + L V+ +G +V I G++++ G A++D + G I VK Sbjct: 134 NKLTRPVQPDQVITPNQLEMAKVVRKGDQVVITAKTGSISVRMPGEAMADGAPGKQIPVK 193 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N +G + V G V V + Sbjct: 194 NQRSGRTIKARVTGPGRVEVAM 215 >gi|330830309|ref|YP_004393261.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas veronii B565] gi|328805445|gb|AEB50644.1| Flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas veronii B565] Length = 227 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +Y+ S+ V + I G++L+ES+L + IRG+Y +VG Sbjct: 93 WDVYLPVRVSIQKP----YVTVANPIAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVG 148 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + ++R L P I LS + V+ +G +V + N I T AL D S G++I + Sbjct: 149 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLV 205 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI +G V G V G V V Sbjct: 206 NIRSGKTVEGKVSAVGAVSVT 226 >gi|121602252|ref|YP_989399.1| flagellar basal body P-ring biosynthesis protein FlgA [Bartonella bacilliformis KC583] gi|120614429|gb|ABM45030.1| flagella basal body P-ring formation protein FlgA [Bartonella bacilliformis KC583] Length = 152 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIK 65 +FFSL +L+ + +A + +VP I G+ +++ L E + S Y +K Sbjct: 10 NVFFSLCLLT--AAYADRVSF-LVPERSIYVGQRVSDVGLSEKNFIIKSEAASLYVIDMK 66 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 V+ V R L I L+ L P ++ RG +++I N+ I+ G+ L S GDV Sbjct: 67 QVLNKVATRPLRAGRPIALTALGDPVLVERGQTIKLIFQSDNLQITAIGVVLQSGSSGDV 126 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149 + V+N D+G +V G+V+ G+VRV Sbjct: 127 VRVRNADSGRIVMGTVLQNGSVRV 150 >gi|258625238|ref|ZP_05720150.1| Flagellar protein flgA precursor [Vibrio mimicus VM603] gi|258582485|gb|EEW07322.1| Flagellar protein flgA precursor [Vibrio mimicus VM603] Length = 265 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ + + VV + E + ES LK + T + + ++ + + V+GL T R + Sbjct: 133 VTIKSVLTLPVVVAKTTLRRDETIQESNLKIEKRTLTR-QEDFYTNTQQVIGLETTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ ++L ++ +G +V II ++ T +T GIAL G I V+N +G ++ Sbjct: 192 SGQIVNPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASGKVI 251 Query: 138 SGSVVDTGTVRV 149 V D V Sbjct: 252 RAVVTDLNQVHT 263 >gi|260365768|ref|ZP_05778264.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus K5030] gi|260880690|ref|ZP_05893045.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AN-5034] gi|260897704|ref|ZP_05906200.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus Peru-466] gi|308086270|gb|EFO35965.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus Peru-466] gi|308092470|gb|EFO42165.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AN-5034] gi|308115034|gb|EFO52574.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus K5030] Length = 265 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ + LK T S ++ + K +GL T R L Sbjct: 133 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTRRLR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 192 AGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGRNQVHT 263 >gi|294140178|ref|YP_003556156.1| flagellar basal-body P-ring formation protein FlgA [Shewanella violacea DSS12] gi|293326647|dbj|BAJ01378.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella violacea DSS12] Length = 234 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + G+++ + + V + +RG +++ Sbjct: 100 WQIFISVRVDILYPV--------VVARQTLGPGDLIAKGDIVIKYVEQTLLRGQQFNNLA 151 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +VVG +R + I + L + +G V I N I T G AL D ++GD Sbjct: 152 EVVGTRVKRRTPANQPIFSNNL---CFVCKGDSVSIFARTDNFEIKTVGEALQDGNLGDR 208 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I +KN + V V+D G V V + Sbjct: 209 IRIKNTYSHKTVDARVIDVGKVEVRM 234 >gi|306846277|ref|ZP_07478838.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO1] gi|306273272|gb|EFM55141.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO1] Length = 160 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 1/153 (0%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGN 59 + R L + + A+ VVPS + G++++++ L E Q N+ Sbjct: 8 LQTTRLALAGGFLLAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y S+ VG V R+ LLP I +S L P +++RG V ++ T G +TI+ G L Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGVPVPLVFTAGTLTITAMGTPLES 127 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 + GD I V+N+D+G++VSG+V+ G ++V ++ Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160 >gi|170741837|ref|YP_001770492.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] gi|168196111|gb|ACA18058.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] Length = 176 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+++ E+ L+E + R + +VG V RR LLP +P++ + Sbjct: 52 VPAVTIYPGDMIKETMLREQSFPPTFRARAAVIDAPLAIVGRVARRTLLPGEPVPVNAVD 111 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++SRG +I + + I+T G L + +G+VI V+N DTG +V G V G +R Sbjct: 112 DPRLVSRGTPTTMIFEENGLIITTLGTPLQNGGLGEVIRVRNTDTGRIVVGVVQGDGRIR 171 Query: 149 V 149 + Sbjct: 172 I 172 >gi|90577340|ref|ZP_01233151.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] gi|90440426|gb|EAS65606.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] Length = 247 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 +++ + +V +I+ E++ L + N + V+GL R + Sbjct: 115 ATVYVQLTLPVMVARTLIHRDELITRGMLDSQMLQL-KAPKNIITDAEQVIGLHAIRRIR 173 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I ++L +P++I++G +V I+ +G ST GIAL + + I V+N T ++ Sbjct: 174 QGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGIALEHGKMHEQIRVENTATQKVI 233 Query: 138 SGSVVDTGTVRVV 150 V G V V Sbjct: 234 HARVFAQGKVETV 246 >gi|330447899|ref|ZP_08311547.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492090|dbj|GAA06044.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 312 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 +++ + +V IN E++ L + + S VG T R + Sbjct: 180 ATIYVEITLPVLVAKTQINRNEMITSDMLSHQSIRLKS-PKAIVTSTDQTVGSYTSRRVR 238 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I ++L +P++I++G +V I+ +G ST GIAL + + I +KN ++ ++ Sbjct: 239 QGQLITENLLKKPFLINKGDEVLIVAKRGEFEASTKGIALEHGKLNEQIKIKNKNSHKVI 298 Query: 138 SGSVVDTGTVRVV 150 SG + G V + Sbjct: 299 SGIIFAQGKVETI 311 >gi|254500840|ref|ZP_05112991.1| flagella basal body P-ring formation protein FlgA [Labrenzia alexandrii DFL-11] gi|222436911|gb|EEE43590.1| flagella basal body P-ring formation protein FlgA [Labrenzia alexandrii DFL-11] Length = 152 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 2/148 (1%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYA 61 ++ + F + + S FA+ I V I AG + L E + + A Sbjct: 4 ALKLVAFCLAMLTAAPSAFAASIELP-VARQTIPAGSEIGHRDLVERKFPSRTATQFAVA 62 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 +VG VTRR LLP IP++ + +P ++ RG R++ + + I AL + Sbjct: 63 SHRSQLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGG 122 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G + V+N+D+G++VSG V GT+RV Sbjct: 123 AGSFVRVRNVDSGLVVSGRVQQDGTIRV 150 >gi|170722898|ref|YP_001750586.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida W619] gi|169760901|gb|ACA74217.1| flagella basal body P-ring formation protein FlgA [Pseudomonas putida W619] Length = 250 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + ++ E + + + + + VG Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRQNIVAEGDVALRERDVGTLTQGFLTDLDQAVG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + VI +G V II G++ + G ALS G+ I V+ Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVIRKGDHVVIIARSGSLAVRMPGEALSKGGQGEQIRVR 228 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 229 NLNSQRVVKARVTAPGQVEVAM 250 >gi|23008124|ref|ZP_00049700.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magnetotacticum MS-1] Length = 158 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 8/153 (5%) Query: 5 RFLLFFSLYVLSLDSLFASVIG-------HAVVPSVVINAGEVLNESRLKEMQVTNS-NI 56 R LF L + L + A + VP+V I G+ + E+ L+ + Sbjct: 3 RTPLFRGLLIACLAAGPAHAVEGMAGGELMLPVPTVTIYPGDTIKETMLRMQAYPATYRA 62 Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116 R + + G RR+LLP +P++ + P ++SRG ++I + + I+ G Sbjct: 63 RTAVIDASAAIAGRTARRMLLPGEPVPVNAVDDPRLVSRGTPTQMIFEENGLVITAIGAP 122 Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 L + +G+ I V+N DT +V G+V+ G +R+ Sbjct: 123 LQNGGLGETIRVRNTDTNRIVLGTVMADGRIRI 155 >gi|260466618|ref|ZP_05812806.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium opportunistum WSM2075] gi|259029624|gb|EEW30912.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium opportunistum WSM2075] Length = 182 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHV 81 +V ++P+ VI GE + + LK++ + A +++ G V +R LLP Sbjct: 52 AVGEVVLIPNRVIYPGETIELTALKQVTLIPGKHKPEAMATVAEELQGKVAKRTLLPGRY 111 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 IP + + +++ +GA V++ G +TIS + L S GD+I V+N D+G ++SG+V Sbjct: 112 IPSTAIRDAWLVEQGAAVQVFFISGGLTISATAVTLQPGSAGDLIKVRNSDSGKILSGTV 171 Query: 142 VDTGTVRVVV 151 + GT++V Sbjct: 172 MADGTIQVSA 181 >gi|217976226|ref|YP_002360373.1| flagella basal body P-ring formation protein FlgA [Methylocella silvestris BL2] gi|217501602|gb|ACK49011.1| flagella basal body P-ring formation protein FlgA [Methylocella silvestris BL2] Length = 148 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDV 67 F ++ + A+ VP++ I G+ + + L + ++ +RGN + + Sbjct: 4 FVAICLFGRIPAHAAESHALPVPAITIYPGDPIKDEWLVDRDFGATSPLRGNVVTNRSAI 63 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G + RR LLP IP +V+ ++ G KVRI+ Q + I+T G AL D ++GDVI+ Sbjct: 64 IGKIARRTLLPGAPIPANVVAERKIVGNGTKVRIVFEQPGIEIATYGAALQDGALGDVIS 123 Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149 ++NI+TG+ V+G V G+VRV Sbjct: 124 LRNIETGLTVTGVVQADGSVRV 145 >gi|153011523|ref|YP_001372737.1| flagellar basal body P-ring biosynthesis protein FlgA [Ochrobactrum anthropi ATCC 49188] gi|151563411|gb|ABS16908.1| FlgA, flagellar basal-body P-ring formation protein [Ochrobactrum anthropi ATCC 49188] Length = 160 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S G V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSPDQAAGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L ++GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAVGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|167623355|ref|YP_001673649.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella halifaxensis HAW-EB4] gi|167353377|gb|ABZ75990.1| SAF domain protein [Shewanella halifaxensis HAW-EB4] Length = 257 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 S+ ++ VV + G++L+ ++ + + +RG+ I +VVG +R + Sbjct: 126 FVSVRVDILYPVVVAKSTMGPGDLLSRGDIELEYIEQTTLRGHQFEEISEVVGARLKRRV 185 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 P I + L ++ +G V I N I T G AL DA++GD + +KN + Sbjct: 186 APGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDANVGDKVRIKNSHSHKN 242 Query: 137 VSGSVVDTGTVRVVV 151 + V G V V + Sbjct: 243 LDARVTGVGQVEVRM 257 >gi|239834441|ref|ZP_04682769.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum intermedium LMG 3301] gi|239822504|gb|EEQ94073.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum intermedium LMG 3301] Length = 163 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ G V R+ LLP I +S L Sbjct: 39 VVPSATVYPGQIVSDTALLEKQFFINAPAASQYVLSLDQAAGKVARKTLLPGKPILVSAL 98 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 99 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLADGRI 158 Query: 148 RVVVK 152 +V ++ Sbjct: 159 QVGMQ 163 >gi|331671800|ref|ZP_08372596.1| SAF domain protein [Escherichia coli TA280] gi|331070789|gb|EGI42148.1| SAF domain protein [Escherichia coli TA280] Length = 252 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ V+ L + ++ S R N Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSVVARDTPLTANDVELKPYNVSAQRRNV 159 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 160 LMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 219 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250 >gi|326794324|ref|YP_004312144.1| flagella basal body P-ring formation protein FlgA [Marinomonas mediterranea MMB-1] gi|326545088|gb|ADZ90308.1| flagella basal body P-ring formation protein FlgA [Marinomonas mediterranea MMB-1] Length = 231 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 63/134 (47%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 S + S++ + SV I+ G V+ + +V + IRG+ + GLV R Sbjct: 96 SFVPVSQSILIDGIKTSVPISRGSVITPTNTTTGKVDITTIRGHLYTAKTPPYGLVASRN 155 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + I + +P ++ +GA+V I G +++ G AL D + G I VKN +G Sbjct: 156 IRINTFITDKITKQPILVKKGARVLITARSGRISVKMNGTALEDGAKGQQIRVKNASSGR 215 Query: 136 MVSGSVVDTGTVRV 149 +V G VV V V Sbjct: 216 IVYGKVVSDSEVLV 229 >gi|311992321|gb|ADQ26734.1| chaperone for P-ring biosynthesis protein [Aeromonas hydrophila] Length = 284 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LY+ S+ V S + G++L+E L + + IRG+Y ++G Sbjct: 150 WDLYLPVRVSIQKP----YVTVSTPVAKGDILSEGVLTQAYQDQTLIRGDYLSDTTALIG 205 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + ++R L P I LS + V+ +G +V + +M I T AL D S GD+I + Sbjct: 206 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 262 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI +G V G V G+V V Sbjct: 263 NIRSGKTVQGKVNAVGSVVVT 283 >gi|118589980|ref|ZP_01547384.1| flagellar basal body P-ring biosynthesis protein A [Stappia aggregata IAM 12614] gi|118437477|gb|EAV44114.1| flagellar basal body P-ring biosynthesis protein A [Stappia aggregata IAM 12614] Length = 151 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-H 62 +R L + V S + A+ VP I AG ++ L E + Sbjct: 3 IRSLFLALVLVFSTAAARAAGGIDLPVPRQTIQAGTEISHQDLIERSFPTRTAQQFAVST 62 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + +VG+V RR LLP +P+S + +P ++ RG R++ + + I AL + Sbjct: 63 NRGQLVGMVARRTLLPGQPVPISSVEKPVLVRRGEPARLVFREQGLMIIMQVEALQNGGA 122 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G+ + V+N+D+G++VSG V + GT+RV Sbjct: 123 GNFVRVRNVDSGLVVSGRVQEDGTIRV 149 >gi|117619788|ref|YP_857349.1| flagella basal body P-ring formation protein FlgA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561195|gb|ABK38143.1| flagella basal body P-ring formation protein FlgA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 285 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LY+ S+ V S + G++L+E L + + +RG+Y ++G Sbjct: 151 WDLYLPVRVSIQKP----YVTVSTPVAKGDILSEGVLTQAYQDQTLMRGDYLSDTTALIG 206 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + ++R L P I LS + V+ +G +V + +M I T AL D S GD+I + Sbjct: 207 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 263 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 NI +G V G V G+V V Sbjct: 264 NIRSGKTVQGKVNAVGSVVVT 284 >gi|254720609|ref|ZP_05182420.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|265985649|ref|ZP_06098384.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|306838571|ref|ZP_07471408.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF 2653] gi|264664241|gb|EEZ34502.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp. 83/13] gi|306406357|gb|EFM62599.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF 2653] Length = 160 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGN 59 + R L L + A+ VVPS + G++++++ L E Q N+ Sbjct: 8 LQTTRLALAGGLLFAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 Y S+ VG V R+ LLP I +S L P +I+RG ++ T G +TI+ G L Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLITRGVPAPLVFTAGTLTITAMGTPLES 127 Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 + GD I V+N+D+G++VSG+V+ G ++V ++ Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160 >gi|148546700|ref|YP_001266802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida F1] gi|148510758|gb|ABQ77618.1| SAF domain protein [Pseudomonas putida F1] Length = 250 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + + E + + + + + VG Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + V+ +G +V II G++++ G ALS + + I V+ Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 228 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 229 NLNSKRVVKARVTGPGQVEVSM 250 >gi|319781680|ref|YP_004141156.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167568|gb|ADV11106.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 175 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++PS VI GE +N + LK++ + A +++ G V +R LLP IP + Sbjct: 50 VLIPSRVIYPGETINLAALKQVTLVVGKHKPEAVATRAEELDGKVAKRTLLPGRYIPSAA 109 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + +++ +GA V+I G +TIS + L + GD++ V+NID+G ++SG+V+ GT Sbjct: 110 IREAWLVEQGASVQIFFIAGGLTISATAVTLQPGAAGDLVKVRNIDSGKILSGTVMADGT 169 Query: 147 VRVVV 151 ++V Sbjct: 170 IQVSA 174 >gi|328543155|ref|YP_004303264.1| flagellar protein FlgA [polymorphum gilvum SL003B-26A1] gi|326412901|gb|ADZ69964.1| flagellar protein FlgA [Polymorphum gilvum SL003B-26A1] Length = 322 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 57/117 (48%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 I G +L L +++ + S ++VGL R L P + + RP + Sbjct: 191 QPIGRGSILKPEDLTVIRLPRQRVPSRAVTSPDEIVGLAARTTLRPGQPLSRTDFERPLI 250 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++RG KV ++ M ++ G A+S + GD I V N+ + +++G+VV G +RV Sbjct: 251 VARGEKVTLLYEMSGMKLTARGQAMSAGAEGDEIDVMNLQSRRIITGTVVARGQIRV 307 >gi|170682474|ref|YP_001742369.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli SMS-3-5] gi|170520192|gb|ACB18370.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli SMS-3-5] Length = 245 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N+ + ++S V ++G V V Sbjct: 213 RKGEMVKVRNVSSQRVISARVAESGVVTTVS 243 >gi|28900118|ref|NP_799773.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus RIMD 2210633] gi|28808401|dbj|BAC61606.1| LfgA [Vibrio parahaemolyticus RIMD 2210633] Length = 235 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ + LK T S ++ + K +GL T R L Sbjct: 103 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTRRLR 161 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 162 AGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 221 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 222 RAVVTGRNQVHT 233 >gi|146307875|ref|YP_001188340.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina ymp] gi|145576076|gb|ABP85608.1| SAF domain protein [Pseudomonas mendocina ymp] Length = 252 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ V V + + V+ S L ++ + Y +G Sbjct: 115 WTVFVPAEVRLYRQV----AVLTRPLKRLSVVKASDLSMVERDVGQLAQGYLTDPTQAIG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L D +I + L VI RG +V I + G + + G AL+D + G I V+ Sbjct: 171 KKLTRQLNSDQIITPAHLQVAEVIRRGDQVVISASGGTVNVRMPGEALTDGAPGQQINVR 230 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ VV G V V + Sbjct: 231 NLRSQRVIRARVVGPGQVEVAM 252 >gi|319409186|emb|CBI82830.1| Flagella basal body P-ring formation protein FlgA [Bartonella schoenbuchensis R1] Length = 152 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRR 74 SL ++A + +VP+ + AG+ +++ L E S YA + ++ V +R Sbjct: 17 SLTVVYADRVNF-IVPNKSVYAGQRVSDVGLSEKSFFIKSEAASLYATQMNQLLNKVAKR 75 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L I L+ L P ++ RG ++I N+ I+ G+ L S GD+I V+N D+G Sbjct: 76 TLTAGRPISLASLGDPVLVERGQTTKLIFQMNNLQITALGVVLQSGSSGDLIRVRNADSG 135 Query: 135 VMVSGSVVDTGTVRV 149 +V G+V+ G VRV Sbjct: 136 RIVMGTVLQNGDVRV 150 >gi|313497755|gb|ADR59121.1| FlgA [Pseudomonas putida BIRD-1] Length = 240 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + + E + + + + + VG Sbjct: 103 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 158 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + V+ +G +V II G++++ G ALS + + I V+ Sbjct: 159 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 218 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 219 NLNSKRVVKARVTGPGQVEVSM 240 >gi|156976137|ref|YP_001447043.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio harveyi ATCC BAA-1116] gi|156527731|gb|ABU72816.1| hypothetical protein VIBHAR_04908 [Vibrio harveyi ATCC BAA-1116] Length = 265 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ ++V +V + I E ++ S LK T S + ++ +GL T R + Sbjct: 133 VTIKSAVTLPVLVATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I + L P +I +G +V II ++ + ST G+AL G I V+NI +G ++ Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENISSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGLNQVHT 263 >gi|152985501|ref|YP_001347163.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PA7] gi|150960659|gb|ABR82684.1| hypothetical protein PSPA7_1780 [Pseudomonas aeruginosa PA7] Length = 232 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL+++ + ++ + Y VVG Sbjct: 95 WTIFMPAQVKLFRQV----VVAVQPLKREHVLDDADIALVERDVGLLTQGYLTDPARVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ + L + + +G +V I+ + + G AL+D + G I V+ Sbjct: 151 QKLRRPVINDQVLAPAFLEQAEAVRKGDQVVILARTATINVKMPGEALADGAPGQQIRVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 211 NLRSQRVIKARVLEPGTVEVNM 232 >gi|167034950|ref|YP_001670181.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida GB-1] gi|166861438|gb|ABY99845.1| flagella basal body P-ring formation protein FlgA [Pseudomonas putida GB-1] Length = 250 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + + E + + + + + VG Sbjct: 113 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + V+ +G +V II G++++ G ALS + + I V+ Sbjct: 169 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 228 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 229 NLNSKRVVKARVTGPGQVEVSM 250 >gi|15598546|ref|NP_252040.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PAO1] gi|218890454|ref|YP_002439318.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa LESB58] gi|254236312|ref|ZP_04929635.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719] gi|254242037|ref|ZP_04935359.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192] gi|9949483|gb|AAG06738.1|AE004757_7 hypothetical protein PA3350 [Pseudomonas aeruginosa PAO1] gi|126168243|gb|EAZ53754.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719] gi|126195415|gb|EAZ59478.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192] gi|218770677|emb|CAW26442.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa LESB58] Length = 232 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL ++ + ++ + Y VVG Sbjct: 95 WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+ Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232 >gi|49082058|gb|AAT50429.1| PA3350 [synthetic construct] Length = 233 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL ++ + ++ + Y VVG Sbjct: 95 WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+ Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232 >gi|312115248|ref|YP_004012844.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium vannielii ATCC 17100] gi|311220377|gb|ADP71745.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium vannielii ATCC 17100] Length = 155 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSN 55 M + + + V + L + VP + G+V+ E L Q++ + Sbjct: 1 MGSIMKSVMITAAVAAPFFLATPSLAEEGGRIVPVPKRALYPGDVITEEMLTSKQLSENE 60 Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115 + VVG +RR LLP IP + P V+ +G V ++ + I+ + Sbjct: 61 NASAFITEASGVVGKTSRRTLLPGLPIPKVAIREPVVVRQGKAVSLVYESDTVRITGLAM 120 Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 AL S+G+ I+ +N D+GV++ G V+ G+VRV Sbjct: 121 ALQSGSVGETISARNPDSGVVIHGVVMADGSVRV 154 >gi|107102882|ref|ZP_01366800.1| hypothetical protein PaerPA_01003950 [Pseudomonas aeruginosa PACS2] Length = 232 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL ++ + ++ + Y VVG Sbjct: 95 WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+ Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232 >gi|28869130|ref|NP_791749.1| flagellar protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967591|ref|ZP_03395739.1| flagellar protein [Pseudomonas syringae pv. tomato T1] gi|301385704|ref|ZP_07234122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato Max13] gi|302062727|ref|ZP_07254268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato K40] gi|302134843|ref|ZP_07260833.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852370|gb|AAO55444.1| flagellar protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927892|gb|EEB61439.1| flagellar protein [Pseudomonas syringae pv. tomato T1] gi|331019680|gb|EGH99736.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 248 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF +V V + ++ E + + S++ + S+ VG Sbjct: 111 WTVFVPAQVQLFRNV----VTVMRPLKRDAIVTEEDIAMRERDVSSLGQGFLASLDQAVG 166 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 167 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 227 NLNSQRVIKANVTGPGQVEVAM 248 >gi|306841048|ref|ZP_07473772.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO2] gi|306288937|gb|EFM60237.1| flagella basal body P-ring formation protein FlgA [Brucella sp. BO2] Length = 160 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|269960112|ref|ZP_06174488.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3] gi|269835083|gb|EEZ89166.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3] Length = 265 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ ++V +V + I+ + L+ S LK T S + ++ +GL T R + Sbjct: 133 VTIKSAVTLPVLVATSTIDRNDTLSASNLKSETRTISR-QDDFYTKANQAIGLETTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I + L P +I +G +V II ++G + ST G+AL G I V+N +G ++ Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKGGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGLNQVHT 263 >gi|88799014|ref|ZP_01114595.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp. MED297] gi|88778241|gb|EAR09435.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp. MED297] Length = 268 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + Y+ +F V V+ + ++ + +L+ + ++R Y + Sbjct: 126 PAWQAYLPIAVQIFKPV----VIAARPLDRNNNVAVGQLRLQRRDIGDLRQGYFLEAAKI 181 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 G RR + VI ++ P +I+RG V +I +G +T++T G AL D ++G+ I Sbjct: 182 EGYALRRTVKAGQVITPYMVEAPSLIARGDWVTVISGRGALTVTTTGEALKDGALGEQIP 241 Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + V V+ G V Sbjct: 242 VRNLSSDETVRAWVIRKGVVST 263 >gi|94267695|ref|ZP_01290964.1| Flageller protein FlgA [delta proteobacterium MLMS-1] gi|93451897|gb|EAT02628.1| Flageller protein FlgA [delta proteobacterium MLMS-1] Length = 242 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 66/138 (47%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 + +G VV + IN GE++ L + SN+ GN+ ++ VG R Sbjct: 105 AEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDGNFVSDPREAVGKQLR 164 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 + P V+ S L +P ++ RG +VRII QG + +S G + G+++ V+N+ + Sbjct: 165 TTIQPGAVLHQSRLEKPPLVRRGDRVRIIAHQGRVRVSAPGEVRDLGAEGELVRVRNLMS 224 Query: 134 GVMVSGSVVDTGTVRVVV 151 + V+D TV ++ Sbjct: 225 RQEIQARVIDGSTVETIL 242 >gi|218703521|ref|YP_002411040.1| lateral flagellar P-ring addition FlgA-like protein [Escherichia coli UMN026] gi|293403351|ref|ZP_06647442.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298378963|ref|ZP_06988844.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900365|ref|ZP_07118540.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] gi|218430618|emb|CAR11484.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli UMN026] gi|291429204|gb|EFF02224.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298280076|gb|EFI21580.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356121|gb|EFJ71991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] Length = 245 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R N Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|116051365|ref|YP_789802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa UCBPP-PA14] gi|296388142|ref|ZP_06877617.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas aeruginosa PAb1] gi|313108700|ref|ZP_07794696.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa 39016] gi|115586586|gb|ABJ12601.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310881198|gb|EFQ39792.1| putative flagella basal body P-ring formation protein [Pseudomonas aeruginosa 39016] Length = 232 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL ++ + ++ + Y VVG Sbjct: 95 WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+ Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 211 NLRSQRVIKARVIEPGTVEVNM 232 >gi|269965640|ref|ZP_06179753.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] gi|269829708|gb|EEZ83944.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] Length = 265 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +S+ +V + + EV+ +K T S + ++ + VGL T R L Sbjct: 133 VTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSRRLR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N +G ++ Sbjct: 192 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGLNQVHT 263 >gi|218528667|ref|YP_002419483.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] gi|218520970|gb|ACK81555.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] Length = 164 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+ + ES L+ + R + + G V RR+LLP +P++ + Sbjct: 41 VPTVTIYPGDTIKESMLRMQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAVD 100 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++SRGA ++I + + I+ G L + +G+ I V+N DT ++ G+V+ G +R Sbjct: 101 DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRIR 160 Query: 149 V 149 + Sbjct: 161 I 161 >gi|23499917|ref|NP_699357.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis 1330] gi|62317104|ref|YP_222957.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 1 str. 9-941] gi|83269096|ref|YP_418387.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis biovar Abortus 2308] gi|161620237|ref|YP_001594123.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella canis ATCC 23365] gi|189022369|ref|YP_001932110.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus S19] gi|225686013|ref|YP_002733985.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis ATCC 23457] gi|254691411|ref|ZP_05154665.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|254695291|ref|ZP_05157119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|254698166|ref|ZP_05159994.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|254702577|ref|ZP_05164405.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|254706291|ref|ZP_05168119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|254711415|ref|ZP_05173226.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|254712014|ref|ZP_05173825.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|254715083|ref|ZP_05176894.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|254731834|ref|ZP_05190412.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|256029955|ref|ZP_05443569.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|256059607|ref|ZP_05449805.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|256111942|ref|ZP_05452893.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|256256597|ref|ZP_05462133.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|256262864|ref|ZP_05465396.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9] gi|260544342|ref|ZP_05820163.1| flagellar protein FlgA [Brucella abortus NCTC 8038] gi|260568515|ref|ZP_05838984.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40] gi|260757025|ref|ZP_05869373.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|260759603|ref|ZP_05871951.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|260762611|ref|ZP_05874945.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|260882835|ref|ZP_05894449.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|261215660|ref|ZP_05929941.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|261216793|ref|ZP_05931074.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|261313735|ref|ZP_05952932.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|261319023|ref|ZP_05958220.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|261319660|ref|ZP_05958857.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|261323576|ref|ZP_05962773.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|261753157|ref|ZP_05996866.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|265986974|ref|ZP_06099531.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|265993389|ref|ZP_06105946.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|297249953|ref|ZP_06933654.1| flagella basal body P-ring formation protein FlgA [Brucella abortus bv. 5 str. B3196] gi|23463494|gb|AAN33362.1| flagellar basal-body P-ring formation protein FlgA, putative [Brucella suis 1330] gi|62197297|gb|AAX75596.1| FlgA, flagellar basal-body P-ring formation protein [Brucella abortus bv. 1 str. 9-941] gi|82939370|emb|CAJ12318.1| Flageller protein FlgA [Brucella melitensis biovar Abortus 2308] gi|161337048|gb|ABX63352.1| FlgA, flagellar basal-body P-ring formation protein [Brucella canis ATCC 23365] gi|189020943|gb|ACD73664.1| Flageller protein FlgA [Brucella abortus S19] gi|225642118|gb|ACO02031.1| flagella basal body P-ring formation protein FlgA [Brucella melitensis ATCC 23457] gi|260097613|gb|EEW81487.1| flagellar protein FlgA [Brucella abortus NCTC 8038] gi|260155180|gb|EEW90261.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40] gi|260669921|gb|EEX56861.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 4 str. 292] gi|260673034|gb|EEX59855.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 2 str. 86/8/59] gi|260677133|gb|EEX63954.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 6 str. 870] gi|260872363|gb|EEX79432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 9 str. C68] gi|260917267|gb|EEX84128.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella abortus bv. 3 str. Tulya] gi|260921882|gb|EEX88450.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M13/05/1] gi|261292350|gb|EEX95846.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M644/93/1] gi|261298246|gb|EEY01743.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis B2/94] gi|261299556|gb|EEY03053.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella neotomae 5K33] gi|261302761|gb|EEY06258.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M163/99/10] gi|261742910|gb|EEY30836.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis bv. 3 str. 686] gi|262764259|gb|EEZ10291.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 3 str. Ether] gi|263092699|gb|EEZ16908.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9] gi|264659171|gb|EEZ29432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella pinnipedialis M292/94/1] gi|297173822|gb|EFH33186.1| flagella basal body P-ring formation protein FlgA [Brucella abortus bv. 5 str. B3196] Length = 160 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|70731829|ref|YP_261571.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas fluorescens Pf-5] gi|68346128|gb|AAY93734.1| flagellar basal-body P-ring formation protein FlgA, putative [Pseudomonas fluorescens Pf-5] Length = 253 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V+ A + ++ + + S Y S+ +G Sbjct: 116 WTVFVPAQVKLFREVVTTA----RPLKRAGIIEPEDVVLRERDISQNNQGYLTSVDQAIG 171 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D ++ L+ L + V+ +G +V I G + + G ALS+ + + I VK Sbjct: 172 QKLVRPMVADQLVTLAHLEQAEVVRKGDQVVISARSGTLNVRMPGEALSNGGMSEQIRVK 231 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ + G V V + Sbjct: 232 NLNSQRVIKARITAPGQVEVAM 253 >gi|256014943|ref|YP_003104952.1| flagellar basal body P-ring biosynthesis protein [Brucella microti CCM 4915] gi|255997603|gb|ACU49290.1| flagellar basal body P-ring biosynthesis protein [Brucella microti CCM 4915] Length = 160 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|163850064|ref|YP_001638107.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium extorquens PA1] gi|240137198|ref|YP_002961667.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens AM1] gi|254559210|ref|YP_003066305.1| flagella basal body p ring formation protein FlgA [Methylobacterium extorquens DM4] gi|163661669|gb|ABY29036.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium extorquens PA1] gi|240007164|gb|ACS38390.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens AM1] gi|254266488|emb|CAX22252.1| Flagella basal body p ring formation protein FlgA [Methylobacterium extorquens DM4] Length = 164 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+ + ES L+ + R + + G V RR+LLP +P++ + Sbjct: 41 VPTVTIYPGDTIKESMLRMQAYPATYRARTAVIDASAAIAGRVARRMLLPGEPVPVNAVD 100 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++SRGA ++I + + I+ G L + +G+ I V+N DT ++ G+V+ G +R Sbjct: 101 DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRIR 160 Query: 149 V 149 + Sbjct: 161 I 161 >gi|254227979|ref|ZP_04921409.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|262396039|ref|YP_003287892.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] gi|151939475|gb|EDN58303.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|262339633|gb|ACY53427.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] Length = 265 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +S+ +V + + EV+ +K T S + ++ +GL T R L Sbjct: 133 VTIKSSLTLPVLVATTTVGRNEVVTAKHVKLETRTISR-QDDFYTRPGQAIGLETSRRLR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 192 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIEVENLSSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGLNQVHT 263 >gi|163803165|ref|ZP_02197048.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] gi|159173065|gb|EDP57898.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] Length = 228 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ ++V +V + I EV++ S LK T S + ++ + V+GL T R + Sbjct: 96 VTIKSAVTLPVLVATSTIGRNEVISASNLKTETRTISR-QNDFFTQMNQVIGLETTRRIR 154 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 I + L P +I +G +V II ++ + ST G+AL G I V+N +G ++ Sbjct: 155 AGQTIAPTNLSSPPLIEKGNEVLIIASKEGFSASTKGVALEQGKKGQQIEVENTRSGKVI 214 Query: 138 SGSVVDTGTV 147 V V Sbjct: 215 RAIVTGVNQV 224 >gi|283784081|ref|YP_003363946.1| lateral flagellar P-ring addition protein [Citrobacter rodentium ICC168] gi|282947535|emb|CBG87087.1| lateral flagellar P-ring addition protein [Citrobacter rodentium ICC168] Length = 256 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 59/130 (45%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ V V+P +I V+ + + S R + + +G+ ++R L Sbjct: 120 VAVRPDVYVPVVMPKSLIARDTVITADDVLLKRYNVSGQRSGLLMDLNEAIGMTSKRPLQ 179 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P + + L P ++ R V I+ G +T + G+AL + G+VI ++N + ++ Sbjct: 180 PGKPLNRAQLVAPVLVKRDQPVMIVSRLGGITAAMPGVALKNGRKGEVIKIRNAASQRII 239 Query: 138 SGSVVDTGTV 147 SG V D G V Sbjct: 240 SGVVDDAGVV 249 >gi|325274808|ref|ZP_08140835.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas sp. TJI-51] gi|324100053|gb|EGB97872.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas sp. TJI-51] Length = 240 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + V+ E + + + + + VG Sbjct: 103 WTVFVPATVRLFRDV----VVVTRPLKRDNVVGEGDVALRERDVGTLGQGFLSELDQAVG 158 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + V+ +G +V I+ G++++ G ALS + + I V+ Sbjct: 159 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIVARSGSLSVRMPGEALSKGGLSEQIRVR 218 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 219 NLNSKRVVKARVTGPGQVEVSM 240 >gi|289679038|ref|ZP_06499928.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae FF5] gi|302185595|ref|ZP_07262268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae 642] gi|330899392|gb|EGH30811.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943194|gb|EGH45603.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. pisi str. 1704B] gi|330953710|gb|EGH53970.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae Cit 7] Length = 222 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P ++ +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVITPVALEQPQMVHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ SV G V V + Sbjct: 201 NLNSQRVIKASVTGPGQVEVAM 222 >gi|148558735|ref|YP_001257214.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ovis ATCC 25840] gi|148370020|gb|ABQ62892.1| putative flagellar basal-body P-ring formation protein FlgA [Brucella ovis ATCC 25840] Length = 160 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ L P I +S L Sbjct: 36 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLFPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|328470097|gb|EGF41008.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 10329] Length = 181 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ + LK T S ++ K +GL T R L Sbjct: 49 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 107 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 108 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 167 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 168 RAVVTGRNQVHT 179 >gi|308126103|ref|ZP_05907780.2| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ4037] gi|308109249|gb|EFO46789.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ4037] Length = 181 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ + LK T S ++ K +GL T R L Sbjct: 49 VTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 107 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 108 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSGRVI 167 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 168 RAVVTGRNQVHT 179 >gi|153831669|ref|ZP_01984336.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] gi|148872179|gb|EDL70996.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] Length = 265 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ ++V ++ + I E ++ S LK T S + ++ +GL T R + Sbjct: 133 VTIKSAVTLPVLIATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I + L P +I +G +V II ++ + ST G+AL G I V+N +G ++ Sbjct: 192 AGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENTSSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 252 RAVVTGLNQVHT 263 >gi|89072320|ref|ZP_01158899.1| LfgA [Photobacterium sp. SKA34] gi|89051852|gb|EAR57304.1| LfgA [Photobacterium sp. SKA34] Length = 270 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 1/133 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 +++ + +V +I+ E++ L ++ + ++ V+GL T R + Sbjct: 138 ATVYVQLTLPVMVARTLIHRDEIITRDMLDSKKLQL-KAPKSIITNVDQVIGLHTNRRIR 196 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I ++L +P++I++G +V I+ +G ST G+AL + + I V+N ++ Sbjct: 197 QGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGVALDHGKMKEQIKVENTANQKVI 256 Query: 138 SGSVVDTGTVRVV 150 V G V + Sbjct: 257 HARVFAQGKVETI 269 >gi|307823527|ref|ZP_07653756.1| flagella basal body P-ring formation protein FlgA [Methylobacter tundripaludum SV96] gi|307735512|gb|EFO06360.1| flagella basal body P-ring formation protein FlgA [Methylobacter tundripaludum SV96] Length = 232 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S++ + + V VV S I GE++ L + S +R ++ ++ V Sbjct: 95 WSIFTSVIIKTYQMV----VVLSQPIRRGEIITRQHLAIEKREVSKLREDFVIQMEQVEN 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L ++ L + P +I RG KV I T+ + +I G+A+ D + G +I+VK Sbjct: 151 KQVTRQLDAGTILSLRNIAEPKLIKRGDKVVISTTKSDFSIKMNGVAMMDGTKGQLISVK 210 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N ++G +++ +V++ G V V Sbjct: 211 NQNSGRIINATVIEPGLVSV 230 >gi|330875965|gb|EGH10114.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 248 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF +V V + +++E + + S++ + S+ VG Sbjct: 111 WTVFVPAQVRLFRNV----VTVMRPLKRDAIVSEEDVALRERDVSSLGQGFLASLDQAVG 166 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 167 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 227 NLNSQRVIKANVTGPGQVEVAM 248 >gi|225628626|ref|ZP_03786660.1| flagella basal body P-ring formation protein FlgA [Brucella ceti str. Cudo] gi|237816666|ref|ZP_04595658.1| flagella basal body P-ring formation protein FlgA [Brucella abortus str. 2308 A] gi|225616472|gb|EEH13520.1| flagella basal body P-ring formation protein FlgA [Brucella ceti str. Cudo] gi|237787479|gb|EEP61695.1| flagella basal body P-ring formation protein FlgA [Brucella abortus str. 2308 A] gi|326410336|gb|ADZ67400.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis M28] gi|326553628|gb|ADZ88267.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis M5-90] Length = 165 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 41 VVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 100 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 101 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 160 Query: 148 RVVVK 152 +V ++ Sbjct: 161 QVGMQ 165 >gi|66046716|ref|YP_236557.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. syringae B728a] gi|63257423|gb|AAY38519.1| Flageller protein FlgA [Pseudomonas syringae pv. syringae B728a] Length = 252 Score = 119 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 115 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 171 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ SV G V V + Sbjct: 231 NLNSQRVIKASVTGPGQVEVAM 252 >gi|87119683|ref|ZP_01075580.1| flagellar protein, putative [Marinomonas sp. MED121] gi|86165159|gb|EAQ66427.1| flagellar protein, putative [Marinomonas sp. MED121] Length = 242 Score = 119 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 60/134 (44%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 S + ++ AV I + +NES +V + +RG + GL+ +R Sbjct: 107 SFLPVSQKILVSAVKAITPIRRKQTINESNTVIAKVDLTQVRGQIYSPNQAPYGLIAKRN 166 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + + I + P ++ RG + I G + + GIA D ++G I VKNI +G Sbjct: 167 ININTFITKQLTELPIIVKRGQNILISAQSGQINVRMNGIAAEDGTLGQQIKVKNISSGR 226 Query: 136 MVSGSVVDTGTVRV 149 V G VV G +RV Sbjct: 227 FVYGKVVSEGEIRV 240 >gi|110632655|ref|YP_672863.1| flagellar protein FlgA [Mesorhizobium sp. BNC1] gi|110283639|gb|ABG61698.1| flagellar protein FlgA [Chelativorans sp. BNC1] Length = 157 Score = 119 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDH 80 A VVP+ VI GE ++ L+EM + + A + D+ G V RR LLP Sbjct: 26 AHAQEVVVVPTRVIYPGETVSAEALQEMMLRQPPRGAASIARTPGDLEGKVARRTLLPGR 85 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 +IPLS + PY++ +G+ V + T G +TIS + L + GD I V+N+D+G + +G Sbjct: 86 LIPLSYVREPYLVEQGSTVTAVFTDGPLTISVLAVPLQPGAAGDFIKVRNVDSGAVFTGI 145 Query: 141 VVDTGTVRV 149 V+ GTV+V Sbjct: 146 VMQDGTVKV 154 >gi|88811797|ref|ZP_01127051.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231] gi|88791188|gb|EAR22301.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231] Length = 244 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV + V ++ + + G L+ ++ + +++ G + ++G Sbjct: 107 WRLYVPVRITQHVEV----LIAARPLPRGIALSADAIRHGRRDPTDLSGAWYTEPSQLLG 162 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L TRR + V+ +L +I RG ++ + T G+MT++ G AL D GD++ V+ Sbjct: 163 LETRRAIRAGEVLSPQLLSSARLIRRGQELVLFATSGSMTVTVKGKALEDGVEGDIVRVR 222 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + +V G VV T V+V + Sbjct: 223 NLSSNRVVEGRVVGTDKVQVSL 244 >gi|330972404|gb|EGH72470.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 222 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ SV G V V + Sbjct: 201 NLNSQRVIKASVTGPGQVEVAM 222 >gi|91224203|ref|ZP_01259466.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] gi|91191114|gb|EAS77380.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] Length = 236 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +S+ +V + + EV+ +K T S + ++ + VGL T R L Sbjct: 104 VTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSRRLR 162 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N +G ++ Sbjct: 163 AGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSGKVI 222 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 223 RAVVTGLNQVHT 234 >gi|26991083|ref|NP_746508.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas putida KT2440] gi|24986118|gb|AAN69972.1|AE016635_8 flagella basal body P-ring formation protein FlgA [Pseudomonas putida KT2440] Length = 225 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + + E + + + + + VG Sbjct: 88 WTVFVPATVRLFRDV----VVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLTELDQAVG 143 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ L + V+ +G +V II G++++ G ALS + + I V+ Sbjct: 144 MKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVR 203 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 204 NLNSKRVVKARVTGPGQVEVSM 225 >gi|260564304|ref|ZP_05834789.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|265989512|ref|ZP_06102069.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] gi|260151947|gb|EEW87040.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|263000181|gb|EEZ12871.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] Length = 157 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 33 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 92 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 93 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 152 Query: 148 RVVVK 152 +V ++ Sbjct: 153 QVGMQ 157 >gi|163744350|ref|ZP_02151710.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45] gi|161381168|gb|EDQ05577.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45] Length = 219 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 60/129 (46%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 FA V VP + +++ E L M++ I ++V+G RRVL P Sbjct: 89 FALVTMPVPVPVTRLLPDDIIMEDDLAIMRLPVGRIGAYVITDAEEVIGKQVRRVLTPGR 148 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 I + P VI+RG +V I + G + +S+ G AL DA G I + N+ + V+G Sbjct: 149 PIQTQSIIHPLVINRGERVDIYFSDGLLALSSPGRALDDAHEGQEIRIVNLVSNKTVTGI 208 Query: 141 VVDTGTVRV 149 GTV + Sbjct: 209 ATGEGTVEI 217 >gi|163844347|ref|YP_001622002.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella suis ATCC 23445] gi|163675070|gb|ABY39180.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 160 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VVPSATVYPGQIVSDTVLLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|254491860|ref|ZP_05105039.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxidans DMS010] gi|224463338|gb|EEF79608.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxydans DMS010] Length = 232 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + V VV + + A E L+++ + + +R Y S V+G Sbjct: 95 WTVYVPVKVKVLQPV----VVAARSLVANETLSKADITLEMMDIGELRQGYIQSTDKVIG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + L +P L + VI RG ++ ++ + G+M + G A+ DAS+G+ + VK Sbjct: 151 QQLKYPLSMGMALPPRGLKQEKVIRRGEQIILVASAGSMEVRMNGTAMGDASVGEKVKVK 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + +V G V G V+V + Sbjct: 211 NSSSKRVVEGIVHAPGVVKVTM 232 >gi|188579868|ref|YP_001923313.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium populi BJ001] gi|179343366|gb|ACB78778.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium populi BJ001] Length = 162 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+ + +S L+ + R + + G RR+LLP +P++ + Sbjct: 39 VPTVTIYPGDTIKDSMLRMQAYPATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAVD 98 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++SRGA ++I + + I+ G L + +G+ I V+N DT +V G+V G +R Sbjct: 99 DPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIVLGTVTADGRIR 158 Query: 149 V 149 + Sbjct: 159 I 159 >gi|94263286|ref|ZP_01287102.1| Flageller protein FlgA [delta proteobacterium MLMS-1] gi|93456369|gb|EAT06493.1| Flageller protein FlgA [delta proteobacterium MLMS-1] Length = 242 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 64/138 (46%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 + +G VV + IN GE++ L + SN+ N+ ++ VG R Sbjct: 105 AEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDSNFVSDPREAVGKQLR 164 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 + P V+ S L P ++ RG +VRII QG + +S G + G+++ V+N+ + Sbjct: 165 TTIQPGAVLHQSRLENPPLVRRGDRVRIIAHQGRVRVSAPGEVRDIGAEGELVRVRNLMS 224 Query: 134 GVMVSGSVVDTGTVRVVV 151 + V+D TV ++ Sbjct: 225 RQEIQARVIDGSTVETIL 242 >gi|289627754|ref|ZP_06460708.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647434|ref|ZP_06478777.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. 2250] gi|330866413|gb|EGH01122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 222 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222 >gi|153837099|ref|ZP_01989766.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ3810] gi|149749687|gb|EDM60432.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AQ3810] Length = 179 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +SV VV + + EV+ + LK T S ++ K +GL T R L Sbjct: 47 VTIKSSVTLPVVVATTTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTRRLR 105 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G ++ Sbjct: 106 AGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVI 165 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 166 RAVVTGRNQVHT 177 >gi|127512273|ref|YP_001093470.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella loihica PV-4] gi|126637568|gb|ABO23211.1| SAF domain protein [Shewanella loihica PV-4] Length = 235 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 3/134 (2%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 S+ V+ VV + + G+++ +++ V S +RG V G +R + Sbjct: 105 ISVRVEVLFPVVVANQTLGPGDLIESDQIRLDYVEQSQLRGQQFDDPVAVTGTRVKRRIP 164 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + S L + +G V I N I T G AL D ++GD I V+N + V Sbjct: 165 ANQPLFASNL---CFVCKGDIVAIYARADNFVIKTNGEALKDGNLGDKIQVRNSRSNKTV 221 Query: 138 SGSVVDTGTVRVVV 151 V G V V + Sbjct: 222 DAHVTGIGEVEVRM 235 >gi|298487866|ref|ZP_07005906.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157591|gb|EFH98671.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 252 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 115 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLASLDQAVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 171 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 231 NLNSQRVIKANVTGPGQVEVAM 252 >gi|257484959|ref|ZP_05639000.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011033|gb|EGH91089.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 222 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVIIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222 >gi|323975934|gb|EGB71028.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TW10509] Length = 252 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 63/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 159 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + + +GL ++ L P + L P +I R V I+ +T S G+AL + Sbjct: 160 LMDLNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNG 219 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 220 RKGEMVKVRNASSQRVISAIVAESGVVTTVS 250 >gi|331006029|ref|ZP_08329371.1| Flagellar basal-body P-ring formation protein flgA [gamma proteobacterium IMCC1989] gi|330420158|gb|EGG94482.1| Flagellar basal-body P-ring formation protein flgA [gamma proteobacterium IMCC1989] Length = 241 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y L S+ SV +V + + G ++ ++ + +R Y V+G Sbjct: 104 WAIYTKHLVSIKKSV----LVINKNLPKGHIVTDTDINYSTKNIRTLRNGYISDKSFVLG 159 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + I L +I +G KV I G++T+ T+G AL + G+ I VK Sbjct: 160 SQLKRPVREGQPIYSHQLEPIELIKKGDKVNISAKVGSLTVVTSGTALDNGRKGEQIDVK 219 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ ++ +V V++ Sbjct: 220 NLRSSRIIRTKIIGASSVEVIL 241 >gi|229592136|ref|YP_002874255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas fluorescens SBW25] gi|229364002|emb|CAY51553.1| putative flagella basal body P-ring formation protein [Pseudomonas fluorescens SBW25] Length = 236 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF V VV + + ++ + + S I Y S+ VG Sbjct: 99 WTVFVPAQVKLFRDV----VVVARPMKRTGIIGFEDVVLRERDISMISQGYLTSLDQAVG 154 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L L + VI +G +V I + G + + G ALS+ + + I VK Sbjct: 155 QKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGGLNVKMPGEALSNGGMSEQIRVK 214 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ V G V V + Sbjct: 215 NLNSNRVIKARVTAPGQVEVAL 236 >gi|256043074|ref|ZP_05446018.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. Rev.1] Length = 159 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 35 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 94 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 95 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 154 Query: 148 RVVVK 152 +V ++ Sbjct: 155 QVGMQ 159 >gi|330892071|gb|EGH24732.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. mori str. 301020] gi|330986458|gb|EGH84561.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 222 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V V + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNV----VTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222 >gi|256158117|ref|ZP_05456035.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] gi|256252929|ref|ZP_05458465.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|261220020|ref|ZP_05934301.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|265996634|ref|ZP_06109191.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] gi|260918604|gb|EEX85257.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti B1/94] gi|262550931|gb|EEZ07092.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella ceti M490/95/1] Length = 160 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V+P + G++++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 36 VMPLATVYPGQIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 95 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 96 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 155 Query: 148 RVVVK 152 +V ++ Sbjct: 156 QVGMQ 160 >gi|293408363|ref|ZP_06652202.1| conserved hypothetical protein [Escherichia coli B354] gi|291471541|gb|EFF14024.1| conserved hypothetical protein [Escherichia coli B354] Length = 245 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 63/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNISAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQNAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVEESGVVTTVS 243 >gi|77460475|ref|YP_349982.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas fluorescens Pf0-1] gi|77384478|gb|ABA75991.1| putative flagella basal body P-ring formation protein [Pseudomonas fluorescens Pf0-1] Length = 232 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF + V + + ++ + + S I + S+ + +G Sbjct: 95 WTVFVPAQVRLFREI----VTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + D VI L L + V+ +G +V I G + + G AL++ + + I VK Sbjct: 151 QKLTRPTVADQVITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVK 210 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ VV G V V + Sbjct: 211 NLNSQRVIKAQVVAPGQVEVAM 232 >gi|104782850|ref|YP_609348.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas entomophila L48] gi|95111837|emb|CAK16561.1| flagella basal body P-ring formation protein FlgA [Pseudomonas entomophila L48] Length = 249 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L V VV + + V+++ + + + Y ++ VG Sbjct: 112 WTVFVPTQVRLLREV----VVMTRPLKRESVIDQGDVALRERDVGTLTQGYLTQLEQAVG 167 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + D V+ + + VI +G +V I+ G++++ G AL + I V+ Sbjct: 168 MKLVRPTVLDQVLTQQHMEQADVIRKGDQVVIVARSGSLSVRMPGEALDKGGMEAQIRVR 227 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ +V V G V V + Sbjct: 228 NLNSKRVVKARVTGPGQVEVAM 249 >gi|71735190|ref|YP_275572.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555743|gb|AAZ34954.1| flagellar basal-body P-ring formation protein FlgA, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 252 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V+ + ++ E + + S++ + S+ VG Sbjct: 115 WTVFVPAQVLLYRNVVTVI----RPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 171 QTVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 230 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 231 NLNSQRVIKANVTGPGQVEVAM 252 >gi|320325083|gb|EFW81152.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. B076] gi|320329342|gb|EFW85335.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. race 4] gi|330880507|gb|EGH14656.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. glycinea str. race 4] Length = 222 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ +V+ + ++ E + + S++ + S+ VG Sbjct: 85 WTVFVPAQVLLYRNVVTVI----RPLKRDAIVTEQDVALRERDVSSLGQGFLASLDQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G++ + G A+SD + I VK Sbjct: 141 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGFNEQIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 201 NLNSQRVIKANVTGPGQVEVAM 222 >gi|312962594|ref|ZP_07777084.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas fluorescens WH6] gi|311283174|gb|EFQ61765.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas fluorescens WH6] Length = 254 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ V VV + + ++ + + S I Y S+ +G Sbjct: 117 WTVFVPAQVKLYRDV----VVVARPLKRTSIIGFEDVVLRERDISQINQGYLTSLDQALG 172 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L L + VI +G +V I + G + + G ALS+ + + I VK Sbjct: 173 QKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGTLNVKMPGEALSNGGMSEQIRVK 232 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ V G V V + Sbjct: 233 NLNSNRVIKARVTAPGQVEVAL 254 >gi|83312593|ref|YP_422857.1| flagellar basal body P-ring biosynthesis protein FlgA [Magnetospirillum magneticum AMB-1] gi|82947434|dbj|BAE52298.1| Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magneticum AMB-1] Length = 324 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 + VRF + S+Y + + A +G G+V+ E ++ + V +R + Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGDVIREDDIQWVDVREEVVRRDII 225 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + + +VG R L + + + +P V+++ + V I+L MT++ G A+ D S Sbjct: 226 SNARMLVGQEPRYQLRAGVPVRTNEVQKPVVVAKNSSVTIMLRSKFMTLTAQGRAIEDGS 285 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +GDVI V N+ + V + G V V+ Sbjct: 286 VGDVIRVTNVQSKQTVDAKIEGPGQVSVM 314 >gi|328545504|ref|YP_004305613.1| flagellar basal body P-ring biosynthesis protein-like protein [polymorphum gilvum SL003B-26A1] gi|326415245|gb|ADZ72308.1| Flagellar basal body P-ring biosynthesis protein-like protein [Polymorphum gilvum SL003B-26A1] Length = 154 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%) Query: 8 LFFSLYVLSLDSLFASVIGHAV-----VPSVVINAGEVLNESRLKEMQVTNSNIRG-NYA 61 L +++ + + A A VP V I+ G+ + L E + + R Sbjct: 5 LLICVFIAGMAASAALSGARAAGIDLPVPRVTIHPGDEIGADLLIERRFPANTTRQFAIV 64 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D+VG+V RR LLP +PL + ++ RG R++ +G + I T AL Sbjct: 65 TSPRDLVGMVARRTLLPGQPVPLGAVAPVMLVKRGEPARLVFKEGGLFIMTQVEALQSGG 124 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147 G V+ V+N+D+GV+V+G+V G++ Sbjct: 125 AGAVVRVRNVDSGVIVTGTVQADGSI 150 >gi|237799198|ref|ZP_04587659.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806217|ref|ZP_04592921.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022053|gb|EGI02110.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027330|gb|EGI07385.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 252 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF +V V + ++ E + + S++ + S+ VG Sbjct: 115 WTVFVPAQVQLFRNV----VTVMRPLKRDAIVTEQDVAMRERDVSSLGQGFLASLDQAVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L +P +I +G +V II G + + G A+SD + I VK Sbjct: 171 QKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGFNEQIRVK 230 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ SV G V V + Sbjct: 231 NLNSQRVIKASVTGPGQVEVAM 252 >gi|325295400|ref|YP_004281914.1| flagella basal body P-ring formation protein FlgA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065848|gb|ADY73855.1| flagella basal body P-ring formation protein FlgA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 321 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A + I G+++ S +K +V + R + S+ +V+G + +R + VI ++ L Sbjct: 198 ATIAVKDIPKGKLITYSDVKIEKVPSKKARKSAI-SLNEVIGKIAKRDIKKGEVIKITDL 256 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 YV+ R V+II N+ I GIAL + +IGD+I +KNI TG ++ V+ G V Sbjct: 257 SPNYVVWRNKPVKIIYDIHNIHIELLGIALENGAIGDIIRIKNISTGKVLICKVIGNGIV 316 Query: 148 RVVVK 152 + V K Sbjct: 317 KFVYK 321 >gi|260774932|ref|ZP_05883833.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] gi|260609187|gb|EEX35345.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] Length = 248 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV + + G V ++ G++++ + V R +I V+G Sbjct: 114 WKLYVP----VRLTRSGPQVTLVGPLSRGQIISRQDVTINMVDLQRFRRQGFSNIDAVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T++ L VI + + V+ R V I + MTI+T G AL+D S G+ I VK Sbjct: 170 AKTKKNLRAGEVIESNDI---CVVCRNETVTIKAVKSGMTITTKGTALTDGSHGEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V V V+ Sbjct: 227 NTKSNRIIEGRVTGISEVTVI 247 >gi|110677664|ref|YP_680671.1| flagellar basal body P-ring biosynthesis protein FlgA [Roseobacter denitrificans OCh 114] gi|109453780|gb|ABG29985.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter denitrificans OCh 114] Length = 140 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 9/146 (6%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R L L L L +LFA V VVP+ I A + S + + N N Sbjct: 2 IRLALISWLMCLPL-ALFAEV----VVPAKTIRANATITASDITLKPIQNENA----YTL 52 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + DVVG R L I + P ++SR V + + I T G AL +G Sbjct: 53 MADVVGQEARTTLYAGRPILFDDIGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVG 112 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 D + + N+D+ + G V G+VRV Sbjct: 113 DRVRIMNLDSRATLFGQVQADGSVRV 138 >gi|83858807|ref|ZP_00952329.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii HTCC2633] gi|83853630|gb|EAP91482.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii HTCC2633] Length = 315 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 55/136 (40%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 S A + V + I G+ + + + +++ + +RG + +VG+ RR Sbjct: 169 PLTVSGRAQRVADVPVLNRTIARGDTITAADVDWVRLPENQVRGEIILAETGLVGMTARR 228 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L D + + P V+ RG V ++ G +T+S AL + G I N+ + Sbjct: 229 ALTADRPVRSYDVEPPVVVERGELVSLVYQVGPLTLSAQARALENGGEGQFIRFVNLQSN 288 Query: 135 VMVSGSVVDTGTVRVV 150 V V G V+ Sbjct: 289 RTVEAWVEGPGRASVL 304 >gi|330811241|ref|YP_004355703.1| flagella basal body P-ring formation protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379349|gb|AEA70699.1| Putative flagella basal body P-ring formation protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 254 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF + V + + ++ + + S I + S+ +G Sbjct: 117 WTVFVPAQVRLFREI----VTTTRPLKRAGIVEPQDVMLRERDISQITQGFLTSVDQAIG 172 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D V+ L L + V+ +G +V I G++ + G ALS+ + + I VK Sbjct: 173 QKLVRPMVADQVVTLVHLEQAEVVRKGDQVVITARTGSLAVRMPGEALSNGGMREQIRVK 232 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ V+ G V V + Sbjct: 233 NLNSQRVIKAQVMAPGQVEVAM 254 >gi|306813308|ref|ZP_07447501.1| flagella basal body P-ring formation protein FlgA [Escherichia coli NC101] gi|305854071|gb|EFM54510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli NC101] Length = 245 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 60/151 (39%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|300936121|ref|ZP_07151060.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] gi|300458699|gb|EFK22192.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] Length = 252 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQHREV 159 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L P ++ R V I+ ++ S G+AL + Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGISASMPGVALKNG 219 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 220 RKGEMVKVRNASSQRVISARVAESGVVTTVS 250 >gi|83647408|ref|YP_435843.1| flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] gi|83635451|gb|ABC31418.1| Flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] Length = 236 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%) Query: 10 FSLYVLSLDSLFAS-VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + +YV + V + VP L L+ ++ ++R + + +DVV Sbjct: 99 WQIYVPVQMERYRQIVTIKSAVP-----RDYALAPEDLETKELNIIDLRYGFYTNAEDVV 153 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G++TRR + ++L P +I++G V I + ++ G+A++D G I V Sbjct: 154 GMITRRPVNAGSAPYPNMLEAPKLINKGDMVVIEAATHHFSVKMPGVAMADGRRGQQIMV 213 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 KN + MV V+ +G VR Sbjct: 214 KNSSSNRMVRAEVIGSGHVRT 234 >gi|17989430|ref|NP_542063.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella melitensis bv. 1 str. 16M] gi|17985307|gb|AAL54327.1| flagella basal body p ring formation protein flga [Brucella melitensis bv. 1 str. 16M] Length = 137 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVPS + G +++++ L E Q N+ Y S+ VG V R+ LLP I +S L Sbjct: 13 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 72 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G + Sbjct: 73 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 132 Query: 148 RVVVK 152 +V ++ Sbjct: 133 QVGMQ 137 >gi|330502728|ref|YP_004379597.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina NK-01] gi|328917014|gb|AEB57845.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas mendocina NK-01] Length = 234 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + L+ V VV + + V+ S L M+ + N+ +G Sbjct: 97 WTVFVPAEIRLYRPV----VVLTRPLKRMSVVKASDLSMMERDVGPLGQNFLTDPTQAIG 152 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L D V+ S L VI RG +V I + + G AL+D + G+ I V+ Sbjct: 153 KKLTRQLGGDQVLAPSHLQIAEVIRRGDQVVISARGTTVNVRMPGEALTDGAPGEQINVR 212 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + +V VV G V V + Sbjct: 213 NLRSQRVVRARVVGPGQVEVAM 234 >gi|261856134|ref|YP_003263417.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus neapolitanus c2] gi|261836603|gb|ACX96370.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus neapolitanus c2] Length = 255 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + + +A+ + + G ++ L V + Y S + +G Sbjct: 119 WRIYVPARI----QTMVNAISLARPLAPGTRISAEDLTTTPVNANQQVNAYLTSPDEAIG 174 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + ++ L VI RG V +I GN+++ST G+A +DA +G I VK Sbjct: 175 QIVTRPMQAGQILTQQDLGIAKVIHRGDHVTVIAGTGNVSVSTEGVAQADAGVGQRIMVK 234 Query: 130 NIDTGVMVSGSVVDTGTV 147 N +G +V G V D TV Sbjct: 235 NSRSGQLVEGFVRDANTV 252 >gi|331645414|ref|ZP_08346518.1| SAF domain protein [Escherichia coli M605] gi|331045576|gb|EGI17702.1| SAF domain protein [Escherichia coli M605] Length = 252 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 59/151 (39%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 159 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L ++ R V I+ +T S G+AL + Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISAVLVERDQPVMIVYQSAGITASMPGVALKNG 219 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250 >gi|163733144|ref|ZP_02140588.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter litoralis Och 149] gi|161393679|gb|EDQ18004.1| flagella basal body P-ring formation protein FlgA, putative [Roseobacter litoralis Och 149] Length = 140 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 9/146 (6%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +RF L S V S +FA V VVP+ I A ++ S + + N N Sbjct: 2 IRFALI-SWLVCSPFFVFAEV----VVPAKTIRANATISASDITLKPIKNENA----YSL 52 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + DVVG R L I + P ++SR V + + I T G AL +G Sbjct: 53 MADVVGQEARTTLYAGRPILFDDVGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVG 112 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 D + + N+D+ + G V G++RV Sbjct: 113 DRVRIMNLDSRATLFGQVQADGSIRV 138 >gi|301646809|ref|ZP_07246661.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|331640709|ref|ZP_08341856.1| SAF domain protein [Escherichia coli H736] gi|301075002|gb|EFK89808.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|331040083|gb|EGI12291.1| SAF domain protein [Escherichia coli H736] Length = 252 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 61/151 (40%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREV 159 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 160 LMELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 219 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250 >gi|254230144|ref|ZP_04923539.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] gi|151937337|gb|EDN56200.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio sp. Ex25] Length = 262 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ +I V + + GE+++ S + + R + + VVG Sbjct: 128 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 183 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I MTI+T G AL D + GD + VK Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 240 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V + V Sbjct: 241 NDKSQRIIEGIVTGIAEITV 260 >gi|323191534|gb|EFZ76795.1| lateral flagellar P-ring addition protein [Escherichia coli RN587/1] Length = 245 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L E+ ++ S R Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTENDVELKPYNVSAQRREV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|224370759|ref|YP_002604923.1| FlgA [Desulfobacterium autotrophicum HRM2] gi|223693476|gb|ACN16759.1| FlgA [Desulfobacterium autotrophicum HRM2] Length = 310 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 62/129 (48%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + + V + ++ GE+L L ++ S I NY + +VG+ ++ L + Sbjct: 180 YVDLYDRVVCATRNLSRGEILAPKDLCLKRINVSKIPDNYLTRLDSLVGMRLKQSLASNG 239 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 +++ +I+RG V ++ +GNM I G+A + +GD I V N+ T +VSG Sbjct: 240 FFRENMVEDSPLINRGDNVVLVARKGNMRIVATGVADQEGRLGDQIQVNNLTTNRVVSGR 299 Query: 141 VVDTGTVRV 149 + TV V Sbjct: 300 ISGPKTVDV 308 >gi|23015789|ref|ZP_00055556.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magnetotacticum MS-1] Length = 324 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 + VRF + S+Y + + A +G GEV+ E+ ++ ++V +R + Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGEVIAEADIQWVEVREEVVRRDIV 225 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + + ++G R L + + + +P + + + V I+L MT++ G A+ D S Sbjct: 226 SNPRMLIGQEPRYQLRAGVPVRTNEVQKPLAVGKNSSVTIVLRSKFMTLTAQGRAMEDGS 285 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +GDVI V N+ + V + G V V+ Sbjct: 286 VGDVIRVTNVQSKQTVDARIEGPGQVSVMS 315 >gi|59889777|emb|CAH19132.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli] gi|284920041|emb|CBG33097.1| lateral flagellar P-ring addition protein (FlgA-like) [Escherichia coli 042] Length = 245 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 62/150 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGLSSKHALQPGKPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTV 242 >gi|327254550|gb|EGE66166.1| lateral flagellar P-ring addition protein [Escherichia coli STEC_7v] Length = 236 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 63/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 84 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 143 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + + +GL ++ L P + L P +I R V I+ +T S G+AL + Sbjct: 144 LMDLNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNG 203 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 204 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 234 >gi|256020224|ref|ZP_05434089.1| flagella basal body P-ring formation protein FlgA [Shigella sp. D9] gi|260853462|ref|YP_003227353.1| putative lateral flagellar P-ring addition protein [Escherichia coli O26:H11 str. 11368] gi|260866409|ref|YP_003232811.1| putative lateral flagellar P-ring addition protein [Escherichia coli O111:H- str. 11128] gi|307313523|ref|ZP_07593144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|331666542|ref|ZP_08367416.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] gi|332281386|ref|ZP_08393799.1| lateral flagellar P-ring addition protein [Shigella sp. D9] gi|257752111|dbj|BAI23613.1| predicted lateral flagellar P-ring addition protein [Escherichia coli O26:H11 str. 11368] gi|257762765|dbj|BAI34260.1| predicted lateral flagellar P-ring addition protein [Escherichia coli O111:H- str. 11128] gi|306906691|gb|EFN37202.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|315059538|gb|ADT73865.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli W] gi|323158107|gb|EFZ44206.1| lateral flagellar P-ring addition protein [Escherichia coli EPECa14] gi|323178498|gb|EFZ64076.1| lateral flagellar P-ring addition protein [Escherichia coli 1180] gi|323379903|gb|ADX52171.1| flagella basal body P-ring formation protein FlgA [Escherichia coli KO11] gi|331065766|gb|EGI37650.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] gi|332103738|gb|EGJ07084.1| lateral flagellar P-ring addition protein [Shigella sp. D9] Length = 245 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 63/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|323495383|ref|ZP_08100460.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] gi|323310306|gb|EGA63493.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] Length = 248 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + + G VV + ++ G++++ + V R SI V+G Sbjct: 114 WRVYVP----VRLTRTGPQVVLTSALSRGQLISGQDVTISMVDLQRFRRQGFSSIDAVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L ++ + V+ R V I + MTI+T G+AL+D S G+ I VK Sbjct: 170 AKAKKNLRAGEILEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V V V+ Sbjct: 227 NSKSNRIIEGRVTGISEVTVI 247 >gi|307136854|ref|ZP_07496210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H736] gi|315616831|gb|EFU97448.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 3431] Length = 245 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 61/151 (40%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|319403962|emb|CBI77550.1| Flagellar protein flgA (fragment) [Bartonella rochalimae ATCC BAA-1498] Length = 109 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 53/99 (53%) Query: 51 VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110 S+ Y +K ++ V +R L IPLS L P ++ RG ++I N+ I Sbjct: 9 FIKSDAASLYVTDMKQILHKVAKRTLTAGRPIPLSSLGDPVLVERGQATKLIFQTHNLQI 68 Query: 111 STAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G+ L S GDVI V+N D+G +V+G+V+ G VRV Sbjct: 69 TALGVVLQSGSSGDVIRVRNSDSGRVVTGTVLQNGDVRV 107 >gi|14581460|gb|AAK31635.1| FlgA [Pseudomonas aeruginosa] Length = 188 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++++ + LF V VV + VL ++ + ++ + Y VVG Sbjct: 51 WTIFMPAQVKLFRQV----VVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 106 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+ Sbjct: 107 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 166 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + ++ V++ GTV V + Sbjct: 167 NLRSQRIIKARVIEPGTVEVNM 188 >gi|163784419|ref|ZP_02179303.1| flagella basal body P-ring formation protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880310|gb|EDP73930.1| flagella basal body P-ring formation protein [Hydrogenivirga sp. 128-5-R1-1] Length = 317 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 AVV I G +++ +K +V N Y +I ++G R + I L Sbjct: 189 TTKAVVAKRYIPKGSIISYDDVKIDKVKAKN-DERYFTNINKLIGKKLRFAVKKGQPITL 247 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 L + Y + R V ++ + I G AL + +GD+I V+N +G ++ V+ Sbjct: 248 KYLEKEYYVFRNTNVEVLYEKNGFRIRLLGRALENGELGDLIRVRNTSSGKVILCKVIGK 307 Query: 145 GTVRVVV 151 V+ + Sbjct: 308 NKVKFIS 314 >gi|117919766|ref|YP_868958.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. ANA-3] gi|117612098|gb|ABK47552.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. ANA-3] Length = 235 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV S + GE+++ ++++ + +++RG Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELISPTQVEIRYIDQNSLRGMQFSDTS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + + I + L + + V I + N + T G AL D +IGD Sbjct: 153 QLSGVRVKRRVAKNFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235 >gi|330961187|gb|EGH61447.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 192 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++++V + LF +V+ + ++ E + + S++ + S+ VG Sbjct: 55 WTVFVPAQVQLFRNVVTVV----RPLKRDAIVTEEDVAMRERDVSSLGQGFLASLDQAVG 110 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R ++ D VI L +P +I +G +V II G + + G A+SD + I VK Sbjct: 111 QKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGFNEQIRVK 170 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+++ ++ +V G V V + Sbjct: 171 NLNSQRVIKANVTGPGQVEVAM 192 >gi|153001478|ref|YP_001367159.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS185] gi|151366096|gb|ABS09096.1| SAF domain protein [Shewanella baltica OS185] Length = 235 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V L + VV + + GE+++ S+++ + +++RG Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + D+ I + L + + V I + + + TAG AL D + GD Sbjct: 153 KLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235 >gi|220934388|ref|YP_002513287.1| Flagellar basal body P-ring biosynthesis protein-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995698|gb|ACL72300.1| Flagellar basal body P-ring biosynthesis protein-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 262 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + +SLYV + +V G VV + G L L+ + + G Y + ++ Sbjct: 122 PVTWSLYVP----VHVAVHGEVVVLGHPLPRGMQLEAQHLRLERHDVGALPGGYLNDLEL 177 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +V RR L V+ ++ P ++ RG +V ++ + + G AL+D S G+ + Sbjct: 178 ARDMVLRRALPAGTVLTPQMVEPPRLVRRGQRVTLLAEGSAVNVRVEGEALADGSRGERV 237 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151 V+N+ + +V G V+ G V V + Sbjct: 238 QVRNLSSRRVVEGVVLSHGVVGVRM 262 >gi|120598226|ref|YP_962800.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. W3-18-1] gi|146293696|ref|YP_001184120.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella putrefaciens CN-32] gi|120558319|gb|ABM24246.1| SAF domain [Shewanella sp. W3-18-1] gi|145565386|gb|ABP76321.1| SAF domain [Shewanella putrefaciens CN-32] gi|319427095|gb|ADV55169.1| flagella basal body P-ring formation protein FlgA [Shewanella putrefaciens 200] Length = 235 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + ++ G+ +N S+++ + +++RG Sbjct: 101 WQIFISVRVDILFPV--------VVTTEILAPGDRINASQIEVRYIEQNSLRGQQFDDPS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G +R + + I + L + + + I + + + TAG AL D +IG+ Sbjct: 153 QLEGTRVKRRIAKESPIFANNL---CFVCKNDAISIYVRSPSFMLKTAGEALQDGNIGEQ 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V+ G V V + Sbjct: 210 IRVKNSSSNKQLDAIVIGIGEVEVRM 235 >gi|24374764|ref|NP_718807.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella oneidensis MR-1] gi|24349430|gb|AAN56251.1|AE015762_8 flagellar basal-body P-ring formation protein FlgA, putative [Shewanella oneidensis MR-1] Length = 235 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV + + GE+++ ++++ V +++RG I Sbjct: 101 WQIFISVRVDILFPV--------VVATEPLAPGELISPTQVEIRYVDQNSLRGMQFSDIN 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + ++ I + L + + V I + N + T G AL D +IGD Sbjct: 153 QLSGVRVKRRVAKNNPIFANNL---CFVCKNDAVSIYVRSSNFVLKTVGEALQDGNIGDQ 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + +V G V V + Sbjct: 210 IRVKNSSSNKELDATVTAIGEVEVRM 235 >gi|27381983|ref|NP_773512.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium japonicum USDA 110] gi|27355153|dbj|BAC52137.1| flgA [Bradyrhizobium japonicum USDA 110] Length = 175 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKD 66 L L VL + A+ VP+V I AGE++ + + E + + + + Sbjct: 29 LAAVLLVLVSARVAAAEEKRLPVPAVSIRAGELIRDDMITERAFAPNLLGVAQFIEGRQI 88 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VG + RR LLP IP + + P+ ++RGA V++++ ++I T G A+ + G +I Sbjct: 89 LVGRMARRALLPGQPIPTNSVEDPWTVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALI 148 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 V+N DTGV++ G V GTV+VV Sbjct: 149 PVRNTDTGVIIRGVVQPDGTVKVV 172 >gi|262394945|ref|YP_003286799.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] gi|262338539|gb|ACY52334.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. Ex25] Length = 248 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ +I V + + GE+++ S + + R + + VVG Sbjct: 114 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I MTI+T G AL D + GD + VK Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V + V Sbjct: 227 NDKSQRIIEGIVTGIAEITV 246 >gi|121534937|ref|ZP_01666756.1| SAF domain [Thermosinus carboxydivorans Nor1] gi|121306536|gb|EAX47459.1| SAF domain [Thermosinus carboxydivorans Nor1] Length = 245 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 62/122 (50%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I A E+L L+ + + Y + V+GL RR L P VI SVL Sbjct: 119 LVAARPIAAWEILTADSLQRERRDVGKLASGYITDEQKVLGLAARRSLTPGAVITDSVLA 178 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +P +I RG + II G + + AG AL D + G VI V+NI + ++S V+D + Sbjct: 179 KPVLIRRGQLIAIIARSGGIEVVAAGQALQDGAEGQVIRVQNIQSKKILSAQVLDNASAL 238 Query: 149 VV 150 V+ Sbjct: 239 VL 240 >gi|304409984|ref|ZP_07391603.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|307302303|ref|ZP_07582061.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] gi|304351393|gb|EFM15792.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|306914341|gb|EFN44762.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] Length = 235 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V L + VV + + GE+++ S+++ + +++RG Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + D+ I + L + + V I + + + TAG AL D + GD Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235 >gi|307945667|ref|ZP_07661003.1| flagella basal body P-ring formation protein FlgA [Roseibium sp. TrichSKD4] gi|307771540|gb|EFO30765.1| flagella basal body P-ring formation protein FlgA [Roseibium sp. TrichSKD4] Length = 326 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 57/115 (49%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + +G+VL + ++ + + N K + GL R L + + + +P + Sbjct: 195 QPLRSGQVLRLEDMTTTRLPRTKVPANAVTDPKQIAGLAARTGLRANMPLVRNDFAKPVL 254 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ISRG KV I G M ++T G A+ D ++GD I +KN+D+G +V V G V Sbjct: 255 ISRGEKVSITYMVGGMKLTTRGRAMDDGALGDPIDIKNLDSGRIVPAMVRSRGQV 309 >gi|126175152|ref|YP_001051301.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS155] gi|125998357|gb|ABN62432.1| SAF domain [Shewanella baltica OS155] Length = 235 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V L + VV + + GE+++ S+++ + +++RG Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + D+ I + L + + V I + + + TAG AL D + GD Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235 >gi|297182935|gb|ADI19084.1| flagellar basal body p-ring biosynthesis protein [uncultured delta proteobacterium HF0070_15B21] Length = 357 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 62/123 (50%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V+ I A V+ E+ + +++ + Y +D++G V R + P+ VI + Sbjct: 234 DVVIAKDTIKADHVIGEADILKVRRNVDRMPSKYVTDAQDILGKVASRAINPNEVIRETT 293 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + V+ G ++ I+ N+ ++ G++L ++GD I V+N+ + ++V +V D Sbjct: 294 VAAQPVVKSGDRLMIVFETQNLRLTAPGMSLQKGALGDRIQVRNLQSKILVYATVRDKNH 353 Query: 147 VRV 149 V+V Sbjct: 354 VQV 356 >gi|323171059|gb|EFZ56708.1| lateral flagellar P-ring addition protein [Escherichia coli LT-68] Length = 245 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 62/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 HKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|156973578|ref|YP_001444485.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio harveyi ATCC BAA-1116] gi|156525172|gb|ABU70258.1| hypothetical protein VIBHAR_01281 [Vibrio harveyi ATCC BAA-1116] Length = 248 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + + V+G Sbjct: 114 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I +G MTI+T G AL D S GD + VK Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V + + Sbjct: 227 NDKSQRIIEGIVTGIAEITIT 247 >gi|54307266|ref|YP_128286.1| hypothetical protein PBPRA0029 [Photobacterium profundum SS9] gi|46911686|emb|CAG18484.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 253 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 4/143 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 ++ + +++ + VV + +N + + L + + +R Y S + Sbjct: 113 PTYWKARAKAEVAIYRQL----VVAKMTLNRHQEITPLMLSMKRSNVAYLRHGYFTSKQA 168 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 + GL +RR ++ +I ++ +P ++ R V I G M + G+AL GD I Sbjct: 169 LTGLTSRRKIVAGKIISPRMVEQPKLVQRNDGVLIEAKFGKMNATMKGVALESGVKGDSI 228 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N+ + + +V VR Sbjct: 229 RVRNLSSQKEIYAIIVGPQKVRT 251 >gi|308050378|ref|YP_003913944.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] gi|307632568|gb|ADN76870.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] Length = 234 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 7/142 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV V VV + +NA +L L+ + +RG +VG Sbjct: 100 WSLYVPVQTRFEYPV----VVATTTLNADAILEPQHLRVEYRDANTLRGKTVSDPSQLVG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + + + ++ G V I G + I T+G A ++GD I V+ Sbjct: 156 ARLVRRIGNGQPVSSNNI---CLVCSGDLVTIYARTGGIEIKTSGEARGSGALGDTIRVQ 212 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N + ++ VV G V V + Sbjct: 213 NSRSQRIIDARVVGIGEVEVRM 234 >gi|145297451|ref|YP_001140292.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA [Aeromonas salmonicida subsp. salmonicida A449] gi|142850223|gb|ABO88544.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA [Aeromonas salmonicida subsp. salmonicida A449] Length = 226 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + L +L V V + I G+ + L E + S ++ + S + + Sbjct: 87 PAWQLRARVEVTLMLPVW----VTAQEIQKGQAIRAGDLVEKSLDISRLQRGFVPSSESL 142 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 VG + R L +I L + + + G V I + +T G AL++ +IGD I Sbjct: 143 VGSKSTRNLRMGQLIGELDLQKAWAVREGEGVLIRAGLDGFSATTRGKALANGAIGDGIK 202 Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149 V+NI +G + V+D G V Sbjct: 203 VRNISSGKEIQAWVIDKGEVET 224 >gi|160876209|ref|YP_001555525.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS195] gi|160861731|gb|ABX50265.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS195] gi|315268399|gb|ADT95252.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS678] Length = 235 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V L + VV + + GE+++ S+++ + +++RG Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + D+ I + L + + V I + + + TAG AL D + GD Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235 >gi|91792658|ref|YP_562309.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella denitrificans OS217] gi|91714660|gb|ABE54586.1| Flageller protein FlgA [Shewanella denitrificans OS217] Length = 235 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 7/143 (4%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + +Y+ + V VV V++ G ++ L V ++RG + I+ ++ Sbjct: 100 LWQVYISVRVEILYPV----VVADNVLSPGALITRDSLNIAFVDQYSLRGQFFTEIEQII 155 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G +R + D I L + +G V I N+ I T+G AL+D + GD I V Sbjct: 156 GSRVKRRVAKDAPILSGNL---CFVCKGDPVSIFARTENIVIKTSGEALNDGNEGDTIRV 212 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 KN + + V G V V + Sbjct: 213 KNSISNRELDAQVTGIGEVEVKM 235 >gi|152995098|ref|YP_001339933.1| flagellar basal body P-ring biosynthesis protein-like protein [Marinomonas sp. MWYL1] gi|150836022|gb|ABR69998.1| Flagellar basal body P-ring biosynthesis protein-like protein [Marinomonas sp. MWYL1] Length = 230 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + S++ A+ IN G+ +++S +V S++RG+ GL+ R L Sbjct: 97 VPVTQSIMIPAIKTITPINRGQAISKSNTDVGEVDISSLRGHVYTKKNPPYGLIASRNLR 156 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + I + ++P ++ +G V I + G + + G+AL + G I VKN + ++ Sbjct: 157 INTFITDDLTNQPTLVKKGDSVLITASSGTIIVRMNGVALENGIKGQQIRVKNTSSERII 216 Query: 138 SGSVVDTGTVRV 149 VV V V Sbjct: 217 YAKVVTDSEVLV 228 >gi|296283229|ref|ZP_06861227.1| flagellar basal body P-ring biosynthesis protein FlgA [Citromicrobium bathyomarinum JL354] Length = 156 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 5/136 (3%) Query: 19 SLFASVIGHAVVP---SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 +L A G VV + I G++L+E +VT + RG+ A + G+ RR Sbjct: 22 ALHAQSTGDGVVADVLTRPIQRGDLLSERDFAPEEVTAAQARGSLA--AQQAAGMEARRT 79 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L + S L P ++ RG V+I + +G +TI+ G AL+DA++G+ + V + T Sbjct: 80 LRAGMPVRASDLAEPRLVKRGETVKISVREGALTITAMGRALADAALGEQVRVFSEATNQ 139 Query: 136 MVSGSVVDTGTVRVVV 151 + G V GTVRV+ Sbjct: 140 TLQGVVEGAGTVRVLA 155 >gi|217972592|ref|YP_002357343.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella baltica OS223] gi|217497727|gb|ACK45920.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS223] Length = 235 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V L + VV + + GE+++ S+++ + +++RG Sbjct: 101 WQIYISVRVDILFPV--------VVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPG 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + D+ I + L + + V I + + + TAG AL D + GD Sbjct: 153 KLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235 >gi|253702431|ref|YP_003023620.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M21] gi|251777281|gb|ACT19862.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M21] Length = 246 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 59/132 (44%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + VV + + GEVL+ S L + S RG Y D VGL + L Sbjct: 113 VQVEVEALADMVVAARTLERGEVLSASDLAVAKRDLSLARGGYLKEPDDAVGLRVKTTLR 172 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + L + V+ G V I+ + ++ +G A + GDVI V+N+ + + Sbjct: 173 ANTPVRKDNLEKVPVVKSGQMVTILAENDVVRVTASGRAKGAGAPGDVITVQNLSSQKDI 232 Query: 138 SGSVVDTGTVRV 149 + VVD TV+V Sbjct: 233 AARVVDAATVKV 244 >gi|149908763|ref|ZP_01897424.1| flagellar basal body P-ring biosynthesis protein [Moritella sp. PE36] gi|149808305|gb|EDM68244.1| flagellar basal body P-ring biosynthesis protein [Moritella sp. PE36] Length = 269 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 54/120 (45%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 IN ++L + ++ + S + S + +V +R + +I S L + Sbjct: 149 AKTDINPNQILKKQNIQLQRGVISRHTQRFITSSQQLVNQRAKRRIRSGKIILPSQLQQR 208 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++ R +V I G+ +S G AL + +GD I +KN+ +G + ++ +G V + Sbjct: 209 LLVERNDEVIIRAGSGSFVVSMKGKALQNGQLGDKIYIKNLSSGKKIQAKIIASGVVETL 268 >gi|315127359|ref|YP_004069362.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas sp. SM9913] gi|315015873|gb|ADT69211.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas sp. SM9913] Length = 213 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++ YV + A V VV + + GEV+ S L IR Y ++G Sbjct: 79 WAQYVHVRITESAPV----VVATTNLARGEVITPSHLSIDMRPAHFIRAQYLEDPTALIG 134 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++R + + L+ + ++ +G V I + + T GIAL D ++G+ + V+ Sbjct: 135 SRSKRNIREGMPVLLNQI---CMVCKGDSVTIYANIKGLRVKTTGIALEDGTLGEQVRVE 191 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N TG +++ V +V+V Sbjct: 192 NKKTGKVLNARVDGVESVQV 211 >gi|119775456|ref|YP_928196.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella amazonensis SB2B] gi|119767956|gb|ABM00527.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella amazonensis SB2B] Length = 235 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S+ A V+ VV + G++L+ ++ V + +RG ++ + G +R + Sbjct: 106 SVRAEVLFPVVVAKRPLGNGDLLDAESIEVRYVDKTLLRGQQFSHLQPLYGSRVKRRIPQ 165 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 D I L + +G V I + I T G AL+D + GD I +KNI++ ++ Sbjct: 166 DAPIFADNL---CFVCKGDAVTIYAKSASFEIKTQGEALADGNEGDRIRIKNINSDRVLE 222 Query: 139 GSVVDTGTVRVVV 151 +V+ G V V + Sbjct: 223 ATVIGVGEVEVKM 235 >gi|74101654|gb|AAZ99744.1| FlgAL [Aeromonas hydrophila] Length = 270 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + L +L V V + I G+ + L E + S ++ + S + + Sbjct: 131 PAWQLRARVEVTLMLPVW----VTAQEIQKGQTIRTGDLVEKSLDISRLQRGFVPSSESL 186 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 VG + R L +I L + + I G V I + +T G AL++ +IGD I Sbjct: 187 VGSKSNRNLRMGQLIGELDLQKAWAIREGEGVLIRAGLDGFSATTRGKALANGAIGDGIK 246 Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149 V+NI +G + V++ G V Sbjct: 247 VRNISSGKEIQAWVIEKGEVET 268 >gi|153834451|ref|ZP_01987118.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] gi|148869147|gb|EDL68179.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi HY01] Length = 243 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + + V+G Sbjct: 109 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 164 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I +G MTI+T G AL D S GD + VK Sbjct: 165 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 221 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V + + Sbjct: 222 NDKSQRIIEGIVTGIAEITIT 242 >gi|296447437|ref|ZP_06889362.1| flagella basal body P-ring formation protein FlgA [Methylosinus trichosporium OB3b] gi|296255057|gb|EFH02159.1| flagella basal body P-ring formation protein FlgA [Methylosinus trichosporium OB3b] Length = 149 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 2/147 (1%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 +R L F + + A + P VVI GE + + L E N G Sbjct: 1 MRRALAFVIAAFVACPVVAGAQERMLPTPRVVIYPGEAIRDDMLAERAF-NGGAAGVVVE 59 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + ++G V RR LLPD IP+ + P +++ A+V+I+ +TI G AL + Sbjct: 60 TRSALIGKVARRTLLPDRPIPVMAVDSPRIVAVNAQVKIVFEVTGLTIVAYGAALQAGGV 119 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 GD I V+N D+G++V+G V G++RV Sbjct: 120 GDFIRVRNQDSGLVVTGRVQPDGSIRV 146 >gi|170021364|ref|YP_001726318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ATCC 8739] gi|188492061|ref|ZP_02999331.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] gi|169756292|gb|ACA78991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ATCC 8739] gi|188487260|gb|EDU62363.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] Length = 245 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 62/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +G ++ L P I L P ++ R V I+ ++ S G+AL + Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGISASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|300817274|ref|ZP_07097492.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] gi|300530250|gb|EFK51312.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] Length = 245 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 63/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +GL ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQWVISAMVAESGVVTTVS 243 >gi|260431747|ref|ZP_05785718.1| flagella basal body P-ring formation protein FlgA [Silicibacter lacuscaerulensis ITI-1157] gi|260415575|gb|EEX08834.1| flagella basal body P-ring formation protein FlgA [Silicibacter lacuscaerulensis ITI-1157] Length = 138 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 6/138 (4%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 L V L LFA + VVP+ I A EV+ LK +VG Sbjct: 6 LMVCLLCPLFAQA--NVVVPTRTIRAKEVITAEDLKIQPGDV----AGAVEDPDLLVGQE 59 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 R L P I S + P V+ R V ++ + +TI G AL ++G+ I N+ Sbjct: 60 ARIALYPGRPIRASDVRAPAVVDRNDLVTLVFVKNGLTIEVEGRALGRGAVGERIRAMNL 119 Query: 132 DTGVMVSGSVVDTGTVRV 149 + V+G V G + V Sbjct: 120 SSRSAVTGKVGPDGQIEV 137 >gi|269965430|ref|ZP_06179549.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] gi|269829909|gb|EEZ84139.1| flagellar basal body P-ring biosynthesis protein [Vibrio alginolyticus 40B] Length = 266 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ +I V + + GE+++ S + + R + S VVG Sbjct: 128 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 183 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I MTI+T G AL D S GD + VK Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 240 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ V D + V Sbjct: 241 NDKSQRIIEXIVTDIAEITV 260 >gi|269961593|ref|ZP_06175955.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833634|gb|EEZ87731.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 248 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + ++ V+G Sbjct: 114 WKVYVPVRISASVPMI----VSTRQLGRGEIISASDVTTSMIELQRFRKDGFSNMDQVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I + MTI+T G AL D S GD + VK Sbjct: 170 SKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGSAGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V + + Sbjct: 227 NDKSQRIIEGIVTGIAEITIT 247 >gi|91225867|ref|ZP_01260836.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] gi|91189517|gb|EAS75793.1| flagellar basal body P-ring biosynthesis protein A [Vibrio alginolyticus 12G01] Length = 248 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ +I V + + GE+++ S + + R + S VVG Sbjct: 114 WKVYVPVRISVSVPMI----VATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I MTI+T G AL D S GD + VK Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V D + V Sbjct: 227 NDKSQRIIEGIVTDIAEITV 246 >gi|114706772|ref|ZP_01439672.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina pelagi HTCC2506] gi|114537720|gb|EAU40844.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina pelagi HTCC2506] Length = 153 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAH 62 ++ L SL + A+ + VP VVI G+ + + L + + G + Sbjct: 6 LKTALALSLGLSGATGSLAAELDMP-VPGVVIYPGQDIVAAGLSTRTFIVKDEKVGLFVV 64 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +D+ G V RR LLP I + L P + G V +I + + I+ G+AL Sbjct: 65 DREDLYGHVARRTLLPGKAIRRADLTTPDAVKAGTNVTLIYAEEGLVITGLGMALESGQE 124 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G+ I V+N D+G+ +SG + GT+ V Sbjct: 125 GETIRVRNTDSGITISGRISPDGTIAV 151 >gi|89092130|ref|ZP_01165085.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum sp. MED92] gi|89083865|gb|EAR63082.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum sp. MED92] Length = 231 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + L++ + + V + VL L + + +R Y S ++ Sbjct: 93 PLWQLFIAAEIKQY----QFVVTAKNSLPRRTVLQAKDLVLEERDTTTLRSAYFLSTSEI 148 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G ++R + VI S++ P +++G V I +G++ I TA AL + IG I Sbjct: 149 IGWSSKRSISTGAVITASMVKAPIAVTKGNAVIIEAKRGSVKIRTAATALENGEIGQQIK 208 Query: 128 VKNIDTGVMVSGSVVDTGTVR 148 V+N +G +V VV G VR Sbjct: 209 VRNDRSGNIVKAVVVAPGLVR 229 >gi|90021861|ref|YP_527688.1| flagellar basal body P-ring biosynthesis protein-like protein [Saccharophagus degradans 2-40] gi|89951461|gb|ABD81476.1| Flageller protein FlgA [Saccharophagus degradans 2-40] Length = 243 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+YV +++ + VV S + G ++E+ L + + + + ++G Sbjct: 106 WSIYVPVDIEVYSEI----VVASRTLRRGATISEADLNVQVINIARYGSGHVQDAQRIIG 161 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + I LS + V+S+G V I + + ++ G AL + +G I V+ Sbjct: 162 QELTRSVNAGEAIKLSHVRPAQVVSKGDTVVIEVRGNMIAVAVNGEALENGHVGKQIRVR 221 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +V G V G V + Sbjct: 222 NNQSKRVVDGVVSGPGRVSI 241 >gi|323181543|gb|EFZ66963.1| lateral flagellar P-ring addition protein [Escherichia coli 1357] Length = 245 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 62/151 (41%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + F + ++ V+ V+ ++ L + ++ S R + Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDV 152 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + D +G ++ L P I L P ++ R V I+ +T S G+AL + Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G+++ V+N + ++S V ++G V V Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243 >gi|319790433|ref|YP_004152066.1| flagella basal body P-ring formation protein FlgA [Thermovibrio ammonificans HB-1] gi|317114935|gb|ADU97425.1| flagella basal body P-ring formation protein FlgA [Thermovibrio ammonificans HB-1] Length = 321 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + VV +V+I G + + +K V S N HS+K+VVG + R +L Sbjct: 188 IPVRIDRLEKVVVAAVLIPKGTKITPTMVKLASVP-SRKAYNAFHSVKEVVGSIARTDIL 246 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I ++L +++ R V+++ G + I G+AL + G +I VKNI TG ++ Sbjct: 247 SGKIIRPTMLKPNFLVKRNMPVKVVYNSGPIHIELLGVALDNGVKGHIIRVKNISTGKVL 306 Query: 138 SGSVVDTGTVRVVVK 152 VV G V + + Sbjct: 307 RCRVVGEGLVEFLSE 321 >gi|113969600|ref|YP_733393.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. MR-4] gi|113884284|gb|ABI38336.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. MR-4] Length = 235 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV S + GE++N S+++ V +++RG Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTN 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + I + L + + V I + N + T G AL D +IGD Sbjct: 153 QISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235 >gi|254473303|ref|ZP_05086700.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp. JE062] gi|211957419|gb|EEA92622.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp. JE062] Length = 124 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +P+++I G+ + E L+E ++ + + ++DVVGL RR L P IP + + Sbjct: 1 MPAMMIYPGDKIEEGMLREHGFFKKSVAQLSIVNRMQDVVGLEARRTLFPGKPIPKNAVQ 60 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 P V+ RG+ V ++ + + I A +IG I +N DTG+ V G V + G+ Sbjct: 61 DPVVVKRGSSVLLVFKEEGLEIRAIVEAQESGAIGANIRARNPDTGLSVLGKVQEDGS 118 >gi|114046832|ref|YP_737382.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella sp. MR-7] gi|113888274|gb|ABI42325.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella sp. MR-7] Length = 235 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + +F S+ V L + VV S + GE++N S+++ V +++RG Sbjct: 101 WQIFMSVRVDILFPV--------VVASETLAPGELINPSQVEIRYVDQNSLRGMQFSDTN 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 + G+ +R + I + L + + V I + N + T G AL D +IGD Sbjct: 153 QISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGNIGDQ 209 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151 I VKN + + V G V V + Sbjct: 210 IRVKNSSSNKELDAIVTAIGEVEVRM 235 >gi|95929875|ref|ZP_01312616.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684] gi|95134171|gb|EAT15829.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684] Length = 243 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V VV + G +++ + + + S IR +K+VVG + R + + Sbjct: 117 VKADVVVAQQSLKRGTIISAEDVSLVHLDVSRIREPIF-DLKNVVGKLVARNVRAGQPVE 175 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + P ++ +G+ V+++ + M ++ GIAL D S G+VI V+N + +V VV Sbjct: 176 FKSVETPPLVHKGSFVKLVARRSGMMLTAIGIALEDGSKGEVIRVQNNRSKKVVMAQVVG 235 Query: 144 TGTVRV 149 V V Sbjct: 236 PDLVEV 241 >gi|315125980|ref|YP_004067983.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas sp. SM9913] gi|315014494|gb|ADT67832.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas sp. SM9913] Length = 253 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 59/132 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 S SV + V +N G+VLN+ L+ V R I +VG +R + Sbjct: 119 RASAKVSVWINLVAAKHTLNRGKVLNKQDLEYKSVDLGKHRHQGETGIDQLVGFTVKREI 178 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 VI L + Y+I++ + + +T + + IAL D +G+VI VKN+ + + Sbjct: 179 DKGTVISNRYLEKQYLINKNEHISLQITTATFSANVKAIALEDGQLGEVINVKNLSSKKV 238 Query: 137 VSGSVVDTGTVR 148 V G V+ G Sbjct: 239 VQGRVIAQGVAE 250 >gi|304310781|ref|YP_003810379.1| Flageller protein FlgA [gamma proteobacterium HdN1] gi|301796514|emb|CBL44722.1| Flageller protein FlgA [gamma proteobacterium HdN1] Length = 227 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 71/140 (50%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S + + + +AV+ + I+ G++++ ++ + + + I D G Sbjct: 90 WSFMMAATLRTY----QNAVIAKIPISRGQIIDTQAVELRETEITPSASGFYTRISDTKG 145 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L+ +R + + V+ ++L P VI RG V I +I TAG+AL+ +IG+++ VK Sbjct: 146 LLAKRSIAANQVLTHTMLKNPDVIQRGQAVIIEAGNTQFSIRTAGVALASGAIGEIVRVK 205 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G V G+++ T+ + Sbjct: 206 NSTSGRTVEGTIISDNTINI 225 >gi|241763673|ref|ZP_04761723.1| flagella basal body P-ring formation protein FlgA [Acidovorax delafieldii 2AN] gi|241367148|gb|EER61514.1| flagella basal body P-ring formation protein FlgA [Acidovorax delafieldii 2AN] Length = 200 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV +S+++ F G A V + + +G L + E +V + Sbjct: 55 LRCVEGATAWSVFLPVTIKAF----GPAWVLNNNVASGVALTAADATEAEVDWAAEAAPV 110 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + VG V R L+ + S++ P V GA+VR++ ++++G ALS+ Sbjct: 111 LANPDQWVGQVASRQLMAGQAVRQSMVRAPAVFRAGAQVRVVTQGPGYMVTSSGQALSNG 170 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + G I ++ +D G +SG V + GTV V + Sbjct: 171 ATGQTIRIR-MDNGRTISGIVNEDGTVAVTL 200 >gi|163794153|ref|ZP_02188126.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199] gi|159180767|gb|EDP65286.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199] Length = 324 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 59/114 (51%) Query: 37 AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 GEV++E+ ++ ++V + N ++D++G RR + I L+ + +VI +G Sbjct: 203 PGEVISENDIQWLRVESRRASMNSVTRLEDLLGRTPRRPIAAGQPIRLTDVRPNFVIDKG 262 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 V I+L G MT++ A ++GD+I V+N + M+ V GTV + Sbjct: 263 DMVTIVLNSGTMTLTARAEATQKGAVGDIIKVRNNHSRRMLEARVTGAGTVSIT 316 >gi|187478181|ref|YP_786205.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella avium 197N] gi|115422767|emb|CAJ49295.1| flagella basal body P-ring formation protein [Bordetella avium 197N] Length = 249 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 5/139 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + +V G V S I AG+ + L + N+ + +VG Sbjct: 113 WTVYVQAS----LNVPGIYYVASRQIPAGQAITSEDLDSREGDLMNLPPGAMTDARSIVG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + I S L ISRG VRII +S+ G AL D + G I V+ Sbjct: 169 MQARHRINIGQPIRGSALRDAASISRGQNVRIIARGNGFVVSSEGQALEDGAPGATIQVR 228 Query: 130 NIDTGVMVSGSVVDTGTVR 148 +G +VSG + G V Sbjct: 229 -TQSGQVVSGVLQPGGQVE 246 >gi|302037629|ref|YP_003797951.1| putative flagella basal body P-ring formation protein FlgA [Candidatus Nitrospira defluvii] gi|300605693|emb|CBK42026.1| putative Flagella basal body P-ring formation protein FlgA [Candidatus Nitrospira defluvii] Length = 265 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 63/133 (47%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + I VVP I E + + ++ +++ + S +V+G R L Sbjct: 132 ATADVAAIVEVVVPVRSIKVDEEIAADDVTTERIVLYDLKQPFVTSPAEVIGKAAIRPLP 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P + I + + RP+ + +G +V I QG ++I T G+ S +G I V N+D+G + Sbjct: 192 PQNAIRTTSVRRPFAVHKGDRVTIEARQGGLSIQTVGVTKSHGELGQTITVSNVDSGKEL 251 Query: 138 SGSVVDTGTVRVV 150 +VV G VRV Sbjct: 252 RATVVAPGVVRVT 264 >gi|158422257|ref|YP_001523549.1| flagellar basal-body P-ring formation protein [Azorhizobium caulinodans ORS 571] gi|158329146|dbj|BAF86631.1| flagellar basal-body P-ring formation protein [Azorhizobium caulinodans ORS 571] Length = 190 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+V I G+ +++S L + + S + R A S + ++G V RR L IP++ Sbjct: 67 VPAVAIYPGDTISDSMLVDRAYSVSPSDRVAVATSRQALIGKVARRGLQAGTPIPVNAYA 126 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P V+SRG ++L +G +TIS +A+ D S+G ++ +KN+D+G++++G+V G+VR Sbjct: 127 DPQVVSRGHLAPVVLQEGGLTISGFAMAMEDGSVGKIVRLKNLDSGLIIAGTVQSDGSVR 186 Query: 149 V 149 V Sbjct: 187 V 187 >gi|120554102|ref|YP_958453.1| SAF domain-containing protein [Marinobacter aquaeolei VT8] gi|120323951|gb|ABM18266.1| SAF domain [Marinobacter aquaeolei VT8] Length = 235 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + V G A++ + + GE L + V + R + V G Sbjct: 98 WRMYVTTSV----EVHGPALIAARPLARGERLTPDLVTVNSVQINASRRGVLTRKESVSG 153 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ RR + V+ +L P I RG V I G+ ++S+ G AL+ A +G+ + V+ Sbjct: 154 MMMRRPVNAGTVMTPDLLEAPNAIERGDHVIITARSGSFSVSSRGKALASAGVGEQVLVE 213 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 N+ + V V G V + + Sbjct: 214 NLRSSRTVKARAVGPGRVEIPM 235 >gi|99082799|ref|YP_614953.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria sp. TM1040] gi|99039079|gb|ABF65691.1| Flagella basal body P-ring formation protein flgA precursor [Ruegeria sp. TM1040] Length = 138 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + +VP I A EV+ L V + S +++G R L I Sbjct: 15 SALADILVPVRTIRAKEVITADDLVFKNVESP----GALSSPNEIIGQEARIALYASRPI 70 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + P ++ R V++I G + I+T G +L + G++I V N+ + V+G + Sbjct: 71 HAGDIGPPALVDRNDLVKLIFRHGGLEITTEGRSLGRGAKGELIRVMNLSSRTTVTGRIR 130 Query: 143 DTGTVRV 149 G + V Sbjct: 131 ADGNIEV 137 >gi|297183132|gb|ADI19275.1| flagellar basal body p-ring biosynthesis protein [uncultured delta proteobacterium HF0200_39L23] Length = 227 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 61/123 (49%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ I ++ E+ + +++ + Y +D++G + R + P+ VI + Sbjct: 104 DVLIAKDTIKEDHIIREADILKVRRNVDRMPSAYVTDEEDILGKIASRAINPNEVIQETN 163 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + VI G ++ I+ N+ ++ GI+L ++GD I V+N+ + ++V ++ D Sbjct: 164 VSAVPVIKSGDRLMIVFETQNLRLTAPGISLQKGALGDRIRVRNLQSKILVYATIEDRNH 223 Query: 147 VRV 149 V+V Sbjct: 224 VQV 226 >gi|260772269|ref|ZP_05881185.1| flagellar basal-body P-ring formation protein FlgA [Vibrio metschnikovii CIP 69.14] gi|260611408|gb|EEX36611.1| flagellar basal-body P-ring formation protein FlgA [Vibrio metschnikovii CIP 69.14] Length = 255 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%) Query: 20 LFASVIGHAVVPSVV----INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 ++ V VP V ++ G+ + ++ + V R S V+G T+R Sbjct: 123 IYVPVRLTMTVPMVTALNALSRGQTITQNDITLSMVDLLRFRRQGFSSQDMVIGAKTKRN 182 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L VI + + V+ R V I M I+T G ALSD ++G+ I VKN + Sbjct: 183 LQLGDVINRNDI---CVVCRNESVLIRAISNGMNITTRGTALSDGNLGEQIKVKNDRSNR 239 Query: 136 MVSGSVVDTGTVRV 149 ++ V G V V Sbjct: 240 IIDAQVSGMGEVTV 253 >gi|261253620|ref|ZP_05946193.1| flagellar basal-body P-ring formation protein FlgA [Vibrio orientalis CIP 102891] gi|260937011|gb|EEX93000.1| flagellar basal-body P-ring formation protein FlgA [Vibrio orientalis CIP 102891] Length = 248 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV G V + I+ G++++E + V R SI V+G Sbjct: 114 WRVYVPVRLI----RTGPQVTLTSPISRGQLISEYDVTISMVDLQRFRRQGFTSIDAVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L VI + V+ R V I + MTI+T G+AL+D S G+ I VK Sbjct: 170 AKAKKNLRAGEVIEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V V V+ Sbjct: 227 NSKSNRIIEGRVSGISEVTVI 247 >gi|209964691|ref|YP_002297606.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodospirillum centenum SW] gi|209958157|gb|ACI98793.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] Length = 326 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 65/137 (47%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 V A + + + + +GEV+ + + ++V + + ++++VGL R Sbjct: 175 VRQTIGARAQDMVEVPILNRRLGSGEVIGDQDIAWIKVPRERVSADVVTDLENLVGLAAR 234 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 R L + + + P V++RGA V ++L MT++ G AL+D +G+ + + N + Sbjct: 235 RTLAANQPVRGRDVRTPVVVARGALVTLLLQTPAMTLTAQGKALADGGLGESVRIVNTTS 294 Query: 134 GVMVSGSVVDTGTVRVV 150 +V +V V V+ Sbjct: 295 NRVVDATVAGPDLVTVL 311 >gi|332533181|ref|ZP_08409050.1| flagellar basal-body P-ring formation protein FlgA [Pseudoalteromonas haloplanktis ANT/505] gi|332037463|gb|EGI73917.1| flagellar basal-body P-ring formation protein FlgA [Pseudoalteromonas haloplanktis ANT/505] Length = 235 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV + + GEV+ +S L +R Y ++G ++R + + L Sbjct: 112 MAPVVVATANLTRGEVITKSHLSIEMKPTHFVRIQYLDDPTMLIGSRSKRNIRSGMPVLL 171 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + + ++ +G V I + I T GIAL D ++G+ I +KN +G +++ V Sbjct: 172 NQI---CMVCKGDSVNIYANLRGLRIKTTGIALEDGTLGEQIQIKNKKSGKVLNARVDGV 228 Query: 145 GTVRV 149 +V+V Sbjct: 229 ESVQV 233 >gi|254508440|ref|ZP_05120560.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 16] gi|219548650|gb|EED25655.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus 16] Length = 248 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + + G V + ++ G+++ + + V R ++ V+G Sbjct: 114 WRVYVP----VRLTRTGPQVTLTTPLSRGQIIASTDVTISMVDLQRYRRQGFSTLDAVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T++ L VI + + V+ R V I + M I+T G+AL+D S G+ I VK Sbjct: 170 AKTKKNLRSGEVIEENDI---CVVCRNETVTIKAVKSGMVITTKGVALTDGSHGEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V V VV Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247 >gi|28897546|ref|NP_797151.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus RIMD 2210633] gi|308094616|ref|ZP_05890645.2| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AN-5034] gi|308125762|ref|ZP_05777207.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus K5030] gi|308126465|ref|ZP_05910342.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus AQ4037] gi|5361002|gb|AAD42909.1|U12817_3 polar flagellar FlgA homolog [Vibrio parahaemolyticus] gi|28805758|dbj|BAC59035.1| polar flagellar FlgA [Vibrio parahaemolyticus RIMD 2210633] gi|308090165|gb|EFO39860.1| flagella basal body P-ring formation protein FlgA [Vibrio parahaemolyticus AN-5034] gi|308106761|gb|EFO44301.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus AQ4037] gi|308115098|gb|EFO52638.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus K5030] Length = 248 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + S + VVG Sbjct: 114 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V D + V Sbjct: 227 NDKSQRIIEGIVTDIAEITVT 247 >gi|262273533|ref|ZP_06051347.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] gi|262222511|gb|EEY73822.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] Length = 224 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 52/119 (43%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + G+ + + + V + +R + + ++G RR + P ++ ++ RP Sbjct: 105 KSPLKRGQAIQLTDVATKAVNIAYVRHGFFTDTEPLIGKQVRRNISPGRILTPKLIDRPV 164 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + R +V I + M GIAL + S GD+I VKN + + V GTV + Sbjct: 165 WVKRDQEVIIEARRDTMIARMKGIALENGSEGDIIRVKNSTSEKEIRARVSSPGTVSTI 223 >gi|209963566|ref|YP_002296481.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] gi|209957032|gb|ACI97668.1| flagella basal body P-ring formation protein FlgA, putative [Rhodospirillum centenum SW] Length = 215 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 55/120 (45%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A VP+ + GE++ L + V + + D++G RR L+P ++ + Sbjct: 92 AAVPNRRLTPGEIIQPGDLASLPVRADQVSARAVVAPTDLIGKQVRRALVPGRLVQSGSV 151 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P V+ R V + G + ++ G AL +GDV+ V N+D+ ++G V G V Sbjct: 152 GEPVVVERSKPVTLEFRSGALLLTARGRALESGGVGDVVRVINLDSNRTITGVVSGPGVV 211 >gi|118588712|ref|ZP_01546120.1| Flageller protein FlgA [Stappia aggregata IAM 12614] gi|118438698|gb|EAV45331.1| Flageller protein FlgA [Stappia aggregata IAM 12614] Length = 331 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 60/128 (46%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A+ + +V + G+++ E L ++ + + ++D+VG R L + Sbjct: 189 ATEMVDVLVLVQPVRRGDIVREEDLNIIREARTKVPAGALTEVEDIVGKQARTTLRANAP 248 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + + RP +I RG K+ + M +++ A+ + GDVI V N+ + +V ++ Sbjct: 249 LSRNDVQRPILIERGEKITVTYVMPGMKLTSRAQAMDSGAKGDVIDVMNLQSRRIVPATI 308 Query: 142 VDTGTVRV 149 G VRV Sbjct: 309 TSRGQVRV 316 >gi|77359715|ref|YP_339290.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas haloplanktis TAC125] gi|76874626|emb|CAI85847.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas haloplanktis TAC125] Length = 235 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++ YV + A V VV +V + GEV+ + L + IR Y + ++G Sbjct: 101 WAQYVHVRVTETAPV----VVANVNLARGEVITAAHLSIEMRSTHFIRVQYLDNPALLIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++R + + LS + ++ +G V I + + T GIAL D S+G+ + VK Sbjct: 157 SRSKRNIRSGMPLLLSQI---CMVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVK 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N TG +++ V +V+V Sbjct: 214 NKKTGKVLNARVDGVESVQV 233 >gi|119503639|ref|ZP_01625722.1| flagellar protein [marine gamma proteobacterium HTCC2080] gi|119460701|gb|EAW41793.1| flagellar protein [marine gamma proteobacterium HTCC2080] Length = 234 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 8/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 ++LYV V + VVP + + G+++ + + + + G I + Sbjct: 98 WTLYV------RGEVAANQVVPVLTAALRRGDLIGNNDIILKKRRITQENGGIVTEIDGL 151 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G+ RR L P + + + L P ++ RG V I+ + +S G AL+ + GD + Sbjct: 152 IGMEARRNLDPGNPLRFNDLVAPILVERGQTVNIVSGGSGLRVSMQGKALAKGAAGDRVL 211 Query: 128 VKNIDTGVMVSGSVVDTGTV 147 V N+ +G V G + G+V Sbjct: 212 VANLTSGTRVEGIIATDGSV 231 >gi|153839087|ref|ZP_01991754.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AQ3810] gi|149747425|gb|EDM58385.1| flagellar basal body P-ring biosynthesis protein [Vibrio parahaemolyticus AQ3810] Length = 248 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + S + VVG Sbjct: 114 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V D + + Sbjct: 227 NDKSQRIIEGIVTDIAEITIT 247 >gi|262276423|ref|ZP_06054232.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] gi|262220231|gb|EEY71547.1| flagellar basal-body P-ring formation protein FlgA [Grimontia hollisae CIP 101886] Length = 232 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L V VV ++ G + + L V RG ++G Sbjct: 98 WQVYVPVQIRLLTPV----VVAKRPLDRGVTIAKEDLIIQLVDARFQRGQTYTDNATLLG 153 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +RV+ I + + ++ R +V I + I G ALSD ++G+ I V+ Sbjct: 154 SRVKRVVGIGEPISGNDI---CMVCRNDEVIITAAGNGLNIIAKGTALSDGALGEQIKVR 210 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +V G++ G V V Sbjct: 211 NTKSNRIVDGTITAVGQVIV 230 >gi|27363711|ref|NP_759239.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus CMCP6] gi|27359827|gb|AAO08766.1| Flagellar basal-body P-ring formation protein flgA [Vibrio vulnificus CMCP6] Length = 248 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ S+ V + ++ GE+++ S + + R I VVG Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +RVL P V+ + V+ R KV I T+ MTI+T G +L D + G+ + VK Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V V V Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246 >gi|37679141|ref|NP_933750.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus YJ016] gi|320157115|ref|YP_004189494.1| flagellar basal-body P-ring formation protein FlgA [Vibrio vulnificus MO6-24/O] gi|37197883|dbj|BAC93721.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio vulnificus YJ016] gi|319932427|gb|ADV87291.1| flagellar basal-body P-ring formation protein FlgA [Vibrio vulnificus MO6-24/O] Length = 248 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ S+ V + ++ GE+++ S + + R I VVG Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +RVL P V+ + V+ R KV I T+ MTI+T G +L D + G+ + VK Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V V V Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246 >gi|90422611|ref|YP_530981.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisB18] gi|90104625|gb|ABD86662.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18] Length = 161 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 3/134 (2%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRV 75 S A VP+ VI G+++ + + + N+ G + VVG + RR Sbjct: 26 ASALAEEPARFPVPATVIYPGDLIKDEMIIDRSF-APNLPGVAAFVGDRPAVVGRIARRT 84 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 LLP +IP++ L ++SRG+ V++++ G+++I T G +L S G +I ++N+DTGV Sbjct: 85 LLPGQLIPINALEEQKLVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGSMIQLRNLDTGV 144 Query: 136 MVSGSVVDTGTVRV 149 + G V G+VR+ Sbjct: 145 TIRGIVQPDGSVRI 158 >gi|296135677|ref|YP_003642919.1| flagella basal body P-ring formation protein FlgA [Thiomonas intermedia K12] gi|295795799|gb|ADG30589.1| flagella basal body P-ring formation protein FlgA [Thiomonas intermedia K12] Length = 242 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +SLY+ VV + + AG VL + L ++ + + + +V Sbjct: 103 VWSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTTVERDAARLPPGAVTDAQALV 158 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + + S+L P ++ G V +I + + G A++D +G + V Sbjct: 159 GQVLRYSVAAGQPLVQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLV 218 Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152 +N+ +G +VSG V G V V ++ Sbjct: 219 RNVQSGRVVSGIVDTQGQVVVPLQ 242 >gi|238927616|ref|ZP_04659376.1| SAF domain protein [Selenomonas flueggei ATCC 43531] gi|238884541|gb|EEQ48179.1| SAF domain protein [Selenomonas flueggei ATCC 43531] Length = 254 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 6/153 (3%) Query: 5 RFLLFFSLYVLSLDSLFAS------VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58 F + ++YV + AS V +V I E + + + + + Sbjct: 102 EFPVLCAVYVDGVLQRRASCYYQVTVYDRVLVAMTDIRMDEAITPANAHIEESSVDTLPE 161 Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 + G V R + VI +L P V+S G+ V ++ G +TI G+AL Sbjct: 162 TTVTDFSRLAGRVAGRYIRKGMVIAPPLLAMPRVVSAGSPVELVAESGGITIRAEGVALE 221 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 IG VI V+N +G ++ G V+D TV+++ Sbjct: 222 AGRIGYVIRVRNASSGKLMRGRVIDEKTVQIIA 254 >gi|39998141|ref|NP_954092.1| flagella basal body P-ring formation protein flgA [Geobacter sulfurreducens PCA] gi|39985087|gb|AAR36442.1| flagella basal body P-ring formation protein flgA, putative [Geobacter sulfurreducens PCA] gi|298507078|gb|ADI85801.1| flagellar basal body P-ring formation protein FlgA [Geobacter sulfurreducens KN400] Length = 248 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 62/132 (46%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ + AVV + + G+++ + + S++ G SI +VVG + + Sbjct: 115 VTVDVEALADAVVAAHPLARGDIITSDDVTVQKRDISSVNGRVYRSIDEVVGKRVKNAVR 174 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + + + + ++ G V II + ++ G A + + GD+I V+N+ + + Sbjct: 175 ANTPLSGASIEKVPLVKSGQLVTIIAESPALRLTATGKARGNGAEGDIIKVQNMGSLKEI 234 Query: 138 SGSVVDTGTVRV 149 V+D GTV+V Sbjct: 235 PARVIDVGTVQV 246 >gi|294339847|emb|CAZ88210.1| putative Flagella basal body P-ring formation protein flgA [Thiomonas sp. 3As] Length = 244 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +SLY+ VV + + AG VL + L ++ + + + +V Sbjct: 105 VWSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTMVERDATRLPPGAVTDAQALV 160 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V R + + S+L P ++ G V +I + + G A++D +G + V Sbjct: 161 GQVLRYSVAAGQPLAQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLV 220 Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152 +N+ +G +VSG V G V V ++ Sbjct: 221 RNVQSGRVVSGIVDAQGQVVVPLQ 244 >gi|119469944|ref|ZP_01612749.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Alteromonadales bacterium TW-7] gi|119446654|gb|EAW27927.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Alteromonadales bacterium TW-7] Length = 235 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV + I GEV+ + + +R Y K ++G ++R + I L Sbjct: 112 MAPVVVTTDNIARGEVITSAHITVEMKPTHFVRVQYQDDPKALIGSRSKRNIREGMPILL 171 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + + ++ +G + I + + I T G+AL D ++G+ I V+N TG +++ V Sbjct: 172 NQI---CMVCKGDAINIYASTKGLQIKTTGVALEDGTLGEQILVENKKTGKVLNARVDGV 228 Query: 145 GTVRV 149 +V+V Sbjct: 229 ESVQV 233 >gi|114570498|ref|YP_757178.1| flagellar basal body P-ring biosynthesis protein FlgA [Maricaulis maris MCS10] gi|114340960|gb|ABI66240.1| flagellar protein FlgA [Maricaulis maris MCS10] Length = 314 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 57/135 (42%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 + A V + + +G+ + S + + + +R + + ++G+ TRR Sbjct: 172 PVRVTGRAYATVELPVLARPVASGQEITASDITWISHRSDRLRPDAILDPEALIGMETRR 231 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L P+ + L RP ++ RG V ++ + ++ A+ DA+ G+V N+ + Sbjct: 232 ALRPNEPLRGYDLQRPLMVERGDLVVLMFEVPGIQLTVRARAMEDAADGEVARFINLQSN 291 Query: 135 VMVSGSVVDTGTVRV 149 V V G RV Sbjct: 292 RTVEALVDGPGRARV 306 >gi|294853177|ref|ZP_06793849.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294818832|gb|EFG35832.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 163 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 52/87 (59%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L Sbjct: 3 SLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVA 62 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149 GD I V+N+D+G++VSG+V+ G ++V Sbjct: 63 GDFIKVRNVDSGIIVSGTVLANGRIQV 89 >gi|288574698|ref|ZP_06393055.1| flagella basal body P-ring formation protein FlgA [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570439|gb|EFC91996.1| flagella basal body P-ring formation protein FlgA [Dethiosulfovibrio peptidovorans DSM 11002] Length = 304 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AVV + G + + L + R Y KD+VG+ R + + + Sbjct: 181 PAVVADSYLRKGVYIKNTDLAIAAIEVRRNRK-YYDDPKDLVGMTVERDMAKGDPFTVRI 239 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 P +I G +R++ G++ +ST+G A+ ++GD I V+N T +V G V GT Sbjct: 240 TEEPELIRTGDLIRLLYRSGSLLVSTSGRAMDRGALGDRIKVRNDRTRKIVFGIVTGPGT 299 Query: 147 VRV 149 V V Sbjct: 300 VEV 302 >gi|297580849|ref|ZP_06942774.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534675|gb|EFH73511.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 255 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + ++V+G Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254 >gi|255609741|ref|XP_002539089.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] gi|223508772|gb|EEF23295.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] Length = 163 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R +S+YV + V G+AVV + I G+ + + L+ + + Sbjct: 22 RAPSSWSIYVPVMI----RVSGNAVVATHPIARGQAITQDDLELQTRDLTQYPNGTFSNP 77 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + ++G + V+ L VI +G +V ++ +S+ G A+ +A+ G Sbjct: 78 EQIIGRTATLNIPAGEVLRPEQLKAALVIRQGQQVTLVAQGAGFKVSSEGTAMGNAATGQ 137 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V+AVK +G ++ G G V V Sbjct: 138 VVAVK-TRSGQIIKGIAKGDGVVEV 161 >gi|259417444|ref|ZP_05741363.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp. TrichCH4B] gi|259346350|gb|EEW58164.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp. TrichCH4B] Length = 138 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + +VP I A E++ L V S +++G R L I Sbjct: 15 SALADILVPVRTIRAKEIIAAEDLVFKNVEAP----GALSSPNEIIGQEARVALYASRPI 70 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + P ++ R V++I G + IST G +L + G++I V N+ + V+G + Sbjct: 71 HAGDIGPPALVDRNDLVKLIFRHGGLEISTEGRSLGRGAEGELIRVMNLSSRTTVTGRIR 130 Query: 143 DTGTVRV 149 G + V Sbjct: 131 ADGNIEV 137 >gi|304438316|ref|ZP_07398257.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368682|gb|EFM22366.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 254 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 6/153 (3%) Query: 5 RFLLFFSLYVLSLDSLFAS------VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58 F ++YV + A+ V H +V I E + + + + Sbjct: 102 EFPAAITVYVDGVLQRRAACYYQVTVYDHVLVAMTDIRMDEAITPANAHVEESAVDTLPE 161 Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 + G V R + VI ++L P V++ G+ V ++ G +TI G+AL Sbjct: 162 TTVTDFDRLAGRVAGRYIRKGTVITPTLLAMPRVLTAGSPVTLVAENGGITIRAEGVALE 221 Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 IG VI V+N +G ++ G VVD TV+++ Sbjct: 222 AGRIGYVIRVRNARSGKIMRGRVVDEKTVQIIA 254 >gi|157959906|ref|YP_001499940.1| SAF domain-containing protein [Shewanella pealeana ATCC 700345] gi|157844906|gb|ABV85405.1| SAF domain protein [Shewanella pealeana ATCC 700345] Length = 254 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + + A V V + ++ GE ++ + ++ +V N + +VG Sbjct: 117 WSLYVRATVEVRAKVP----VANRLLRRGEHISLADIEWQEVNLDASDRNLVGQLDQIVG 172 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L I L P ++ G +V I + G AL G I V+ Sbjct: 173 RQVVRKLRRHQAIKSQQLDDPQWVNIGDRVIIEARSNGFYANMPGEALEGGGQGQAIRVR 232 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ +G ++S + G V Sbjct: 233 NLSSGKVISAYPIAKGRV 250 >gi|90418391|ref|ZP_01226303.1| putative flagellar basal body P-ring formation protein [Aurantimonas manganoxydans SI85-9A1] gi|90338063|gb|EAS51714.1| putative flagellar basal body P-ring formation protein [Aurantimonas manganoxydans SI85-9A1] Length = 165 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP+ VI G+ + L + + G YA +VG V RR LLP I LS L Sbjct: 43 VPTTVIYPGQSVTGPGLHHKAFYVKDDKIGLYAVDDSALVGRVARRTLLPGKAIRLSDLK 102 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++ GA V ++ ++ + I+ G AL A G+ + V+N D+G++VSG V G++R Sbjct: 103 EPDLVRAGAAVTLVYSEAGLVITGQGTALRSAGAGETVRVRNADSGIIVSGIVSADGSIR 162 Query: 149 V 149 + Sbjct: 163 I 163 >gi|222053733|ref|YP_002536095.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. FRC-32] gi|221563022|gb|ACM18994.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. FRC-32] Length = 226 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 61/134 (45%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + VV + GEV++ + + + S ++G + + +VVG R Sbjct: 91 VPVKVEVEAMAEMVVAVRPLERGEVIDAADVAVQKRGLSRLQGRFVRDVDEVVGKRVRTA 150 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + ++ I L R +I G V I+ ++ I+ AG A + + GD + V+N+ + Sbjct: 151 IRGNNPIRPDFLERVPLIKSGQLVTIVAENESLRITAAGKARNSGAEGDTVMVRNLASQK 210 Query: 136 MVSGSVVDTGTVRV 149 + V+D TV+V Sbjct: 211 ELPARVIDAETVKV 224 >gi|15642202|ref|NP_231834.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586266|ref|ZP_01676056.1| flagellar protein, putative [Vibrio cholerae 2740-80] gi|121726549|ref|ZP_01679798.1| flagellar protein, putative [Vibrio cholerae V52] gi|147674697|ref|YP_001217720.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae O395] gi|153817121|ref|ZP_01969788.1| flagellar protein, putative [Vibrio cholerae NCTC 8457] gi|153820832|ref|ZP_01973499.1| flagellar protein, putative [Vibrio cholerae B33] gi|153825364|ref|ZP_01978031.1| flagellar protein, putative [Vibrio cholerae MZO-2] gi|153829335|ref|ZP_01982002.1| putative flagellar protein [Vibrio cholerae 623-39] gi|183179559|ref|ZP_02957770.1| flagellar protein, putative [Vibrio cholerae MZO-3] gi|227082327|ref|YP_002810878.1| flagellar protein, putative [Vibrio cholerae M66-2] gi|229507720|ref|ZP_04397225.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae BX 330286] gi|229512085|ref|ZP_04401564.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae B33] gi|229513847|ref|ZP_04403309.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TMA 21] gi|229519220|ref|ZP_04408663.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC9] gi|229528792|ref|ZP_04418182.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae 12129(1)] gi|229607224|ref|YP_002877872.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MJ-1236] gi|254225797|ref|ZP_04919402.1| flagellar protein, putative [Vibrio cholerae V51] gi|254286488|ref|ZP_04961445.1| flagellar protein, putative [Vibrio cholerae AM-19226] gi|254849332|ref|ZP_05238682.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MO10] gi|298500419|ref|ZP_07010224.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MAK 757] gi|9656759|gb|AAF95348.1| flagellar protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549532|gb|EAX59558.1| flagellar protein, putative [Vibrio cholerae 2740-80] gi|121631002|gb|EAX63381.1| flagellar protein, putative [Vibrio cholerae V52] gi|125621703|gb|EAZ50032.1| flagellar protein, putative [Vibrio cholerae V51] gi|126512389|gb|EAZ74983.1| flagellar protein, putative [Vibrio cholerae NCTC 8457] gi|126521624|gb|EAZ78847.1| flagellar protein, putative [Vibrio cholerae B33] gi|146316580|gb|ABQ21119.1| putative flagellar protein [Vibrio cholerae O395] gi|148875176|gb|EDL73311.1| putative flagellar protein [Vibrio cholerae 623-39] gi|149741048|gb|EDM55117.1| flagellar protein, putative [Vibrio cholerae MZO-2] gi|150423437|gb|EDN15381.1| flagellar protein, putative [Vibrio cholerae AM-19226] gi|183012970|gb|EDT88270.1| flagellar protein, putative [Vibrio cholerae MZO-3] gi|227010215|gb|ACP06427.1| flagellar protein, putative [Vibrio cholerae M66-2] gi|227014099|gb|ACP10309.1| flagellar protein, putative [Vibrio cholerae O395] gi|229332566|gb|EEN98052.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae 12129(1)] gi|229343909|gb|EEO08884.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC9] gi|229349028|gb|EEO13985.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TMA 21] gi|229352050|gb|EEO16991.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae B33] gi|229355225|gb|EEO20146.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae BX 330286] gi|229369879|gb|ACQ60302.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae MJ-1236] gi|254845037|gb|EET23451.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MO10] gi|297541112|gb|EFH77166.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio cholerae MAK 757] Length = 255 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + ++V+G Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254 >gi|229522152|ref|ZP_04411569.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TM 11079-80] gi|229524198|ref|ZP_04413603.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae bv. albensis VL426] gi|229337779|gb|EEO02796.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae bv. albensis VL426] gi|229341077|gb|EEO06082.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae TM 11079-80] Length = 255 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + ++V+G Sbjct: 121 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254 >gi|308095530|ref|ZP_05906616.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus Peru-466] gi|308086102|gb|EFO35797.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus Peru-466] Length = 216 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + S + VVG Sbjct: 82 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 137 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK Sbjct: 138 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 194 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V D + V Sbjct: 195 NDKSQRIIEGIVTDIAEITVT 215 >gi|126176160|ref|YP_001052309.1| SAF domain-containing protein [Shewanella baltica OS155] gi|125999365|gb|ABN63440.1| SAF domain [Shewanella baltica OS155] Length = 245 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + +L A + V + + E++ L+ + + + K ++G Sbjct: 108 WSLYVRAKVALSAYIP----VANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + I S L+ P ++S G +V I GIA+ +GD I V+ Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVR 223 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +++ + G V Sbjct: 224 NSSSGRIITAYPIAKGRVET 243 >gi|153213632|ref|ZP_01948905.1| flagellar protein, putative [Vibrio cholerae 1587] gi|124115831|gb|EAY34651.1| flagellar protein, putative [Vibrio cholerae 1587] Length = 255 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + ++V+G Sbjct: 121 WRIYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254 >gi|212637781|ref|YP_002314306.1| flageller protein FlgA [Shewanella piezotolerans WP3] gi|212559265|gb|ACJ31719.1| Flageller protein FlgA [Shewanella piezotolerans WP3] Length = 248 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 4/138 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LYV + V V + ++ GE ++ + ++ QV S + ++ ++G Sbjct: 111 WNLYVRASV----QVSARLPVANRILKRGEHISAADIEWQQVKLSVSDRDLVTELEQIIG 166 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L VI L +P ++ G KV I + +G AL G I V+ Sbjct: 167 QQVVRKLRRHRVIKAQQLGKPQWVNIGDKVIIEARSNGFYANMSGEALEAGGEGKAIRVR 226 Query: 130 NIDTGVMVSGSVVDTGTV 147 N+ +G ++S + G V Sbjct: 227 NLSSGKIISAYPIAKGRV 244 >gi|88858149|ref|ZP_01132791.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas tunicata D2] gi|88819766|gb|EAR29579.1| putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring [Pseudoalteromonas tunicata D2] Length = 235 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 +D +++L + + L + V+ I G+++ + +R Sbjct: 96 LDEIKWLQYVQVRTTELAEI--------VITQNPIAKGQLITAQDIVTEMRPTHLVRNQN 147 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 IK ++G R + + I L+ + +I +G KV I Q N+ I T G AL + Sbjct: 148 IDDIKMLIGSRATRSIRAGNPINLNQI---CMICKGDKVTIYAKQPNLVIKTNGEALENG 204 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +G+ I+V+N +G + V++T V V Sbjct: 205 LLGENISVQNSKSGKKIQAQVMNTNDVIV 233 >gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria pomeroyi DSS-3] gi|56676836|gb|AAV93502.1| flagellar basal-body P-ring formation protein FlgA [Ruegeria pomeroyi DSS-3] Length = 138 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 4/130 (3%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L + +VP+ I A E++ L +V+G R L Sbjct: 12 LAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEVP----GSFTDPAEVIGQEARVALYAG 67 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I + + P ++ R V + G + I+T G AL + GDVI V N+ + VSG Sbjct: 68 RPIRYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSG 127 Query: 140 SVVDTGTVRV 149 + G++ V Sbjct: 128 QIRPNGSIEV 137 >gi|54308091|ref|YP_129111.1| flagellar basal body P-ring biosynthesis protein FlgA [Photobacterium profundum SS9] gi|46912517|emb|CAG19309.1| putative FlgA [Photobacterium profundum SS9] Length = 235 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L VV + + G VLN S L V + RG +++G Sbjct: 101 WQVYVPVRVQLLLP----RVVAATPLARGLVLNASHLSVKLVESRFQRGIVFEQPAEIIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R V I G + I T G ALSD ++G+ I V+ Sbjct: 157 SKVKRTVNIGEAVQGNDI---CLVCRNDAVMIKAGNGGLNIITNGTALSDGALGEQIRVQ 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V G V V Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233 >gi|163802609|ref|ZP_02196501.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4] gi|159173692|gb|EDP58511.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4] Length = 216 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + + + VVG Sbjct: 82 WKVYVPVRISASVPMI----VSTRQLGRGEIISTSDVTTSMIELQRFRKDGFTTYEQVVG 137 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I +G MTI+T G AL D + GD + VK Sbjct: 138 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGATGDQVRVK 194 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V + + + Sbjct: 195 NDKSQRIIEGIVTNIAEITIT 215 >gi|90410999|ref|ZP_01219013.1| flagellar basal body P-ring biosynthesis protein [Photobacterium profundum 3TCK] gi|90328212|gb|EAS44523.1| flagellar basal body P-ring biosynthesis protein [Photobacterium profundum 3TCK] Length = 235 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L VV + + G VLN S L V + RG +++G Sbjct: 101 WQVYVPVRIQLLLP----RVVAATPLARGLVLNASHLSVKLVESRFQRGIVFEHPTEIIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R V I G + + T G ALSD ++G+ I V+ Sbjct: 157 SKVKRTIKMGEAVQGNDI---CLVCRNDAVIIKAGNGGLNVITNGTALSDGALGEQIRVQ 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V G V V Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233 >gi|325982376|ref|YP_004294778.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp. AL212] gi|325531895|gb|ADZ26616.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp. AL212] Length = 249 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + + V+ + + + I G+++ + + + +VG Sbjct: 113 WTIYVQAEIN----VMSNVLHTARPIATGQIITNEDIAPQNTNLTQLPEGILTDASLIVG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V L + +L PYVI RG V +++ I + G AL+DA+ G VI V+ Sbjct: 169 KVAATNLPAGQPLRPQMLRAPYVILRGQTVSLVVQGRGFNIQSEGQALADAADGQVIQVR 228 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +VSG V + Sbjct: 229 N-KSGRIVSGLARPNSIVEI 247 >gi|308050028|ref|YP_003913594.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] gi|307632218|gb|ADN76520.1| flagella basal body P-ring formation protein FlgA [Ferrimonas balearica DSM 9799] Length = 252 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + Y+ + S A + V + G + S L + ++ + +VG Sbjct: 115 WRYYIRARVSAVAELP----VARHRLGRGHTIQASDLTLAKRELGVTSQDWVFARDALVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR + D I S + P +S G +V I G + G+AL S G + V+ Sbjct: 171 QSVRRAIRADKPIRHSQVTAPNWVSLGQEVLIEAAGGGFSAVMKGVALDAGSEGQPVRVR 230 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ +G +++ V G V+ Sbjct: 231 NLSSGQVITAYPVAPGKVQT 250 >gi|218708798|ref|YP_002416419.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio splendidus LGP32] gi|218321817|emb|CAV17785.1| Flagellar basal body P-ring biosynthesis protein FlgA [Vibrio splendidus LGP32] Length = 248 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ + V + + GE++ + + ++ + R + + V+G Sbjct: 114 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK Sbjct: 170 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V V V Sbjct: 227 NDKSQRIIEGIVTSMSEVTV 246 >gi|260767919|ref|ZP_05876853.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260615949|gb|EEX41134.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] Length = 233 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ AS+ VV + G L S L T + + ++ I + GL R L Sbjct: 101 VTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDFFTRIDEASGLEVNRRLR 159 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ +++ +P ++ +G +V II + + ST G+AL D GD I V+N + +V Sbjct: 160 AGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRGDQIEVQNSASQSVV 219 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 220 HAVVTGLNQVHT 231 >gi|323498426|ref|ZP_08103422.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio sinaloensis DSM 21326] gi|323316499|gb|EGA69514.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio sinaloensis DSM 21326] Length = 248 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + + G V ++ G++++ + V R +I V+G Sbjct: 114 WRVYVP----VRLTRTGPQVTLIAPLSRGQIISARDVTISMVDLQRYRRQGFSTIDAVIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T++ L +I + + V+ R V I + M I+T G+A++D S G+ I VK Sbjct: 170 AKTKKNLRSGEIIEENDI---CVVCRNETVTIKAVKSGMVITTKGVAMTDGSHGEQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V V VV Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247 >gi|21113068|gb|AAM41243.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573877|gb|AAY49287.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 281 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I +GE ++ + + + + I G VG RR+L Sbjct: 147 FVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVLADPATAVGKTARRIL 206 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L P ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 207 PAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 266 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 267 VQGIVEASGTVVV 279 >gi|288962679|ref|YP_003452973.1| FlgA protein [Azospirillum sp. B510] gi|288914945|dbj|BAI76429.1| FlgA protein [Azospirillum sp. B510] Length = 246 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 59/128 (46%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V VP I GEV+ + L +++ + S + +VG RR + + Sbjct: 108 AEVEVTMPVPVRRIRPGEVIEAADLTTIRLPLERAGAGFITSAEALVGQSPRRQISAGRM 167 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + + P V+ R V ++ G + ++ G AL + +GD + V NI + +V+G+V Sbjct: 168 VQVGSVGAPIVVQRNRPVTLVYEDGALMLAARGRALQEGGVGDTVRVMNIASSTIVTGTV 227 Query: 142 VDTGTVRV 149 TV V Sbjct: 228 TGAETVSV 235 >gi|91204382|emb|CAJ70882.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 339 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + IN ++L + ++ +++ G S++ ++G + P + +++ Sbjct: 216 VVANRKINRNDILTTKDICIKRIETTSMPGFTTIDSVEPLLGKRVLYTIPPGKPLTQNMV 275 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P VI +G V+I++ GN++I T G+A D G I V N+DT + G V D TV Sbjct: 276 DDPAVIKKGELVKILVKIGNLSILTKGVAKEDGYKGRAIKVMNLDTKKELYGEVQDDCTV 335 Query: 148 RVVV 151 ++++ Sbjct: 336 KIIL 339 >gi|218778845|ref|YP_002430163.1| flagella basal body P-ring formation protein FlgA [Desulfatibacillum alkenivorans AK-01] gi|218760229|gb|ACL02695.1| Flagella basal body P-ring formation protein FlgA [Desulfatibacillum alkenivorans AK-01] Length = 324 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 53/124 (42%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 VV + ++ +VL + S + K+V G+ R+ + + Sbjct: 199 APVVVATRKLDRMDVLTAGDVTVEMRNLSRLPDGVVTDPKEVRGMRLRQDMDAGEHMLSR 258 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 +L +P ++ RG V I+ G ++I+ G+A +GD I V+N + +++ V Sbjct: 259 MLEKPPLVERGEDVTIMAENGVLSITAIGLAKESGGLGDAIEVENKMSEKIITCRVTGPA 318 Query: 146 TVRV 149 V V Sbjct: 319 QVEV 322 >gi|304412512|ref|ZP_07394118.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|307307171|ref|ZP_07586909.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] gi|304349154|gb|EFM13566.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica OS183] gi|306910410|gb|EFN40841.1| flagella basal body P-ring formation protein FlgA [Shewanella baltica BA175] Length = 245 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + +L A + V + + E++ L+ + + + K ++G Sbjct: 108 WSLYVRAKVALSAYIP----VANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + I S L+ P ++S G +V I GIA+ GD I V+ Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKQGDAIRVR 223 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +++ + G V Sbjct: 224 NSSSGRIITAYPIAKGRVET 243 >gi|114777906|ref|ZP_01452820.1| flagellar protein [Mariprofundus ferrooxydans PV-1] gi|114551693|gb|EAU54245.1| flagellar protein [Mariprofundus ferrooxydans PV-1] Length = 234 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 60/127 (47%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + A+V I+A +L + + + G + + +VG+ T R L VI Sbjct: 103 MATAIVMRQNISARSLLTRDMMTNRRTDIAGHHGAWWQNSSTLVGMRTTRPLAAGDVILS 162 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S + +P ++ RG V I+L G + I G A+ A G+ I V+N+ + M+ V T Sbjct: 163 SYVKQPPLVKRGDLVSILLDVGGLHIRAEGKAMRSAGKGESIPVRNMRSHEMIQAVVEQT 222 Query: 145 GTVRVVV 151 G VRV + Sbjct: 223 GLVRVSL 229 >gi|330826751|ref|YP_004390054.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans K601] gi|329312123|gb|AEB86538.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans K601] Length = 248 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 5/151 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ +++++ F G A V + + +GEVL+E+ E +V + Sbjct: 103 LRCMDGPTRWNVFLPITVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + + VGL+ R L + +++ P + G+ VR+++ ++++G A+S Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + G + V+ + G +V+G V++ GTV + Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVEAAL 248 >gi|149912835|ref|ZP_01901369.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. AzwK-3b] gi|149813241|gb|EDM73067.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. AzwK-3b] Length = 139 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 4/136 (2%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 L L V +V + I E++ + A+ + V+G R Sbjct: 7 LILLLAAGPVSADMIVAARTIRPQEIITLGDVGFQAGEI----AGIANRLDQVIGQEARV 62 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L I L+ + P V+ R V +I + I+T G AL A +G++I V N+ + Sbjct: 63 ALYAGRPIRLTDIGEPAVVDRNQMVSLIFESHGLRIATEGRALDRAGVGEMIRVMNMSSR 122 Query: 135 VMVSGSVVDTGTVRVV 150 VSG V+ G +RV+ Sbjct: 123 ATVSGEVLPDGRIRVM 138 >gi|21108208|gb|AAM36850.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 312 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 57/133 (42%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I AGE ++ + + + + I G VG RR+L Sbjct: 178 FVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 237 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + G ALSDA + ++V+N + + Sbjct: 238 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVSVENSSSRRV 297 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 298 VQGIVEASGTVVV 310 >gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus denitrificans BC] gi|317119096|gb|ADV01585.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus denitrificans BC] Length = 248 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 5/151 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ +++++ F G A V + + +GEVL+E+ E +V + Sbjct: 103 LRCMDGPTRWNVFLPISVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + + VGL+ R L + +++ P + G+ VR+++ ++++G A+S Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + G + V+ + G +V+G V++ GTV + Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVEAAL 248 >gi|270262405|ref|ZP_06190676.1| SAF domain-containing protein [Serratia odorifera 4Rx13] gi|270043089|gb|EFA16182.1| SAF domain-containing protein [Serratia odorifera 4Rx13] Length = 217 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VIG+ +V + I+AG L + +K + + +G V+ R + P + Sbjct: 90 QVIGNYLVSARNISAGSRLTAADVKLKSGRLDTLAPRTLTNADKAIGAVSLRNISPGQPL 149 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G V++ IS AG A+++A+ D + V+ + +G +VSG Sbjct: 150 TFAMLRRAWVIKAGQPVQVTAQGTGFNISGAGKAMNNAAAEDSVRVR-MASGQIVSGIAD 208 Query: 143 DTGTVRVVV 151 D GT+R+ + Sbjct: 209 DDGTIRIAL 217 >gi|269103194|ref|ZP_06155891.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163092|gb|EEZ41588.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium damselae subsp. damselae CIP 102761] Length = 231 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L VV SV + G VL+++ L + + RG S + + G Sbjct: 97 WQVYVPVRVQLLLP----RVVASVPLGRGMVLSQNNLTVALIESRFQRGAIYQSPQALFG 152 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R KV I Q + I T G ALSD ++G+ I VK Sbjct: 153 AKVKRNVKIGEAVQANDI---CMVCRNDKVVISAGQPGLKIITQGTALSDGTLGEQIRVK 209 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++S V G V V Sbjct: 210 NNRSNKIISAQVSAVGEVDV 229 >gi|225850284|ref|YP_002730518.1| putative flagellar protein FlgA [Persephonella marina EX-H1] gi|225645553|gb|ACO03739.1| putative flagellar protein FlgA [Persephonella marina EX-H1] Length = 312 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 S+ + + I GE++ E ++ ++ T+ N+R + IKD+VG + + Sbjct: 176 RISVKYRKLRRVIAAKRYIKKGEIITEEDIRFIK-TDKNVRKPF-TDIKDIVGSTAKIDI 233 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + VI ++ Y + R V++I ++ ++ I G+AL + +GD+I VKNI +G + Sbjct: 234 SENDVITERMVIPDYKVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKV 293 Query: 137 VSGSVVDTGTV 147 + V+ TV Sbjct: 294 LICKVIGKDTV 304 >gi|285018214|ref|YP_003375925.1| flagellar basal body p-ring biosynthesis protein [Xanthomonas albilineans GPE PC73] gi|283473432|emb|CBA15937.1| probable flagellar basal body p-ring biosynthesis protein [Xanthomonas albilineans] Length = 255 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 60/134 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + + +V + + AGE + + + + + I G VG + RR L Sbjct: 121 FVPVKVRRMQQVLVLARGLTAGETIGAADIVPEKRDAARIVGAVMTDPAVAVGKLVRRTL 180 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ L L P ++ RG V ++ +G + + AG A+SDA + + V+N+ + + Sbjct: 181 PAGTLLSLGDLVSPRLVRRGDNVALVARKGGLEVRMAGRAMSDAGENERVTVENLSSRRI 240 Query: 137 VSGSVVDTGTVRVV 150 V G+V G V V Sbjct: 241 VQGTVSQNGDVLVT 254 >gi|114320051|ref|YP_741734.1| flageller protein FlgA [Alkalilimnicola ehrlichii MLHE-1] gi|114226445|gb|ABI56244.1| flagellar protein FlgA [Alkalilimnicola ehrlichii MLHE-1] Length = 238 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + V +V + + GE L + + +++ Y + ++G Sbjct: 101 WTVYVSARVDTQVEV----LVAARPLRRGERLRADSVTTERRQLASLHRPYETEAEHLIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 RR L +I + L P ++ RG V + G + ++ G AL +GD++ V+ Sbjct: 157 KELRRSLRRGDLIAGNALAAPQLVQRGRSVTLRAGGGRVQVTGQGKALESGVLGDIVRVE 216 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 +G +V G V V V Sbjct: 217 AGSSGRVVEGRVAGESLVEV 236 >gi|148976388|ref|ZP_01813094.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales bacterium SWAT-3] gi|145964211|gb|EDK29467.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales bacterium SWAT-3] Length = 234 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ + V + + GE++ + + ++ + R + + V+G Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRALARGEIIGQYDVTTAMISLNKFRRQGFTAPEQVIG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V + V V Sbjct: 213 NDKSQRIIEGIVTNMSEVTV 232 >gi|86146161|ref|ZP_01064487.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. MED222] gi|85836108|gb|EAQ54240.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. MED222] Length = 234 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ + V + + GE++ + + ++ + R + + V+G Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V V V Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232 >gi|315179622|gb|ADT86536.1| Flagellar basal body P-ring biosynthesis protein [Vibrio furnissii NCTC 11218] Length = 233 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ AS+ VV + G L S L T + + ++ I + GL R L Sbjct: 101 VTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDFFTRIDEASGLEVNRRLR 159 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ +++ +P ++ +G +V II + + ST G+AL D G+ I V+N + +V Sbjct: 160 AGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDGGRGEQIEVQNSASQSVV 219 Query: 138 SGSVVDTGTVRV 149 V V Sbjct: 220 HAVVTGLNQVHT 231 >gi|146278640|ref|YP_001168799.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides ATCC 17025] gi|145556881|gb|ABP71494.1| SAF domain [Rhodobacter sphaeroides ATCC 17025] Length = 139 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 4/137 (2%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 +VL L L + VV + I A EVL L T +GL Sbjct: 3 WVLLLLCLASPAPADTVVATRTIRALEVLGPGDLALRPETLP----GTLTEPAQAIGLEA 58 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 R L + + + P +++R V + + G + I G AL+ +GDVI V N+ Sbjct: 59 RVTLYAGRPVGIGDVGPPGIVNRNQIVPLAYSLGALEIRAEGRALARGGVGDVIRVMNLS 118 Query: 133 TGVMVSGSVVDTGTVRV 149 + VSG + D G+V V Sbjct: 119 SRSTVSGRIADDGSVHV 135 >gi|91794999|ref|YP_564650.1| flageller protein FlgA [Shewanella denitrificans OS217] gi|91717001|gb|ABE56927.1| Flageller protein FlgA [Shewanella denitrificans OS217] Length = 222 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV ++ + V V + + E ++ + L +T + D+VG Sbjct: 85 WSLYVRAIVT----VTARLPVVNRTLMRSETVSATDLNWRTLTLKPADKDILSREVDIVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L + +I S L P ++ G V I G+A+ G+ I VK Sbjct: 141 QQVVRKLRKNSIIKASYLDAPVLVKLGEPVIIEANSQGFHAKMTGVAMDSGKQGEPIRVK 200 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +++ + G V+ Sbjct: 201 NSRSGKVITAYPISKGRVQT 220 >gi|330445342|ref|ZP_08308994.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489533|dbj|GAA03491.1| flagella basal body P-ring formation protein FlgA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 235 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV L VV +V + G VL +L + + RG+ ++++G Sbjct: 101 WQLYVPVNVQLTLP----KVVAAVALGRGMVLTPDKLSVQMIESRFQRGSSFDDPREIIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + ++ + ++ R V I G + I T G ALSD +IGD I V+ Sbjct: 157 SKVKRSVKAGEMVQARDI---CLVCRNDSVIIRAGTGGLNIVTKGKALSDGAIGDEIRVQ 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + M+ + G V V Sbjct: 214 NTKSRRMIDAIITAVGEVTV 233 >gi|84388085|ref|ZP_00990981.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus 12B01] gi|84377152|gb|EAP94022.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus 12B01] Length = 234 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S+ + V + + GE++ + + ++ + R + + V+G Sbjct: 100 WRVYVPVRLSMSVPL----VTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTAPQQVIG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V V V Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232 >gi|120597301|ref|YP_961875.1| SAF domain-containing protein [Shewanella sp. W3-18-1] gi|146294554|ref|YP_001184978.1| SAF domain-containing protein [Shewanella putrefaciens CN-32] gi|120557394|gb|ABM23321.1| SAF domain [Shewanella sp. W3-18-1] gi|145566244|gb|ABP77179.1| SAF domain [Shewanella putrefaciens CN-32] Length = 245 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + L A + V S + EV+ L+ + + + K ++ Sbjct: 108 WSLYVRAKVDLSAYIP----VTSKTLERDEVVTAENLQWKMLPLTASDQDIITDEKHILD 163 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + I + L P+++S G +V I + G+A+ GD I V+ Sbjct: 164 QAVARKIRKNKPIRTNNLSAPWLVSIGEEVIIEAASATFYANMLGVAMDAGKQGDAIRVR 223 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G +++ V G V+ Sbjct: 224 NTSSGKIITAYPVAKGRVQT 243 >gi|302392938|ref|YP_003828758.1| flagella basal body P-ring formation protein FlgA [Acetohalobium arabaticum DSM 5501] gi|302205015|gb|ADL13693.1| flagella basal body P-ring formation protein FlgA [Acetohalobium arabaticum DSM 5501] Length = 328 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 58/129 (44%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +V I + L E++ K + + + + R + ++ Sbjct: 200 TAYQRVLVAQESIKRRQSLAENQFKWEKRPLVKLHSQPFTDVDSIQNYRLERSINTGQIL 259 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +++ P ++ R +V+II G + +STAG+AL + G+ I V+NI + + V+ Sbjct: 260 TRNLIEIPPLVKRRDRVKIIAVVGRVRVSTAGVALESGTEGEHIKVRNIKSNREIMAKVI 319 Query: 143 DTGTVRVVV 151 TV+V++ Sbjct: 320 GKKTVKVIL 328 >gi|146341905|ref|YP_001206953.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium sp. ORS278] gi|146194711|emb|CAL78736.1| putative flagellar protein FlgA [Bradyrhizobium sp. ORS278] Length = 351 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 58/122 (47%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 AVV + I+ EV+ L+ + + G S + VG+ RR + + + L Sbjct: 197 AVVLTRNIDRNEVIRAGDLQTERRPKVELGGAEPASRELAVGMQMRRPVRAGQALKATDL 256 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P ++ R V +I + ++T G AL + GDV++V N+ + ++G V+ G V Sbjct: 257 AKPDLVQRDQTVTLIYQTAGIYLTTRGKALESGTEGDVVSVLNLQSKRTITGRVIGRGQV 316 Query: 148 RV 149 + Sbjct: 317 SI 318 >gi|197120122|ref|YP_002140549.1| flagellar basal body P-ring formation protein FlgA [Geobacter bemidjiensis Bem] gi|197089482|gb|ACH40753.1| flagellar basal body P-ring formation protein FlgA [Geobacter bemidjiensis Bem] Length = 246 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 57/132 (43%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + VV + + GEVL S L + S RG Y + GL + + Sbjct: 113 VQVEVEALADMVVAARTLERGEVLLASDLSVAKRDLSLARGGYLKEPDEAAGLRVKATMR 172 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + L + V+ G V I+ + ++ +G A + GDVI V+N+ + + Sbjct: 173 ANTPVRKDNLEKVPVVKSGQMVTILAENDVVKVTASGRAKGAGAPGDVITVQNLSSQKEI 232 Query: 138 SGSVVDTGTVRV 149 + VVD TV+V Sbjct: 233 AARVVDAATVKV 244 >gi|90579902|ref|ZP_01235710.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] gi|90438787|gb|EAS63970.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum S14] Length = 235 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV L VV SV + G V+ +L V + RGN +++G Sbjct: 101 WQLYVPVNVQLTLP----KVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I + ++ R V I G + I T G ALSD +IG+ I V+ Sbjct: 157 SKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQ 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + M+ + G V V Sbjct: 214 NKTSRRMIDAIITAVGEVTV 233 >gi|328473460|gb|EGF44308.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio parahaemolyticus 10329] Length = 198 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV S +I V + + GE+++ S + + R + S + VVG Sbjct: 64 WKVYVPVRVSSSVPMI----VATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 119 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK Sbjct: 120 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 176 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ G V D + + Sbjct: 177 NDKSQRIIEGIVTDIAEITIT 197 >gi|254512113|ref|ZP_05124180.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae bacterium KLH11] gi|221535824|gb|EEE38812.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae bacterium KLH11] Length = 137 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 L L + + + VVP+ I A EV++ S L+ V S + ++G R Sbjct: 6 LMLALMPLTAMAEIVVPNRTIRAKEVISASDLEIRAVE----AQGAVRSAEALIGQEARI 61 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L P I S + P ++ R V ++ + ++I+T G AL + G+ I V N+ + Sbjct: 62 ALYPGRPIRPSDIGPPAIVDRNDLVMLVFDRVALSITTEGRALGRGAAGERIRVMNLSSR 121 Query: 135 VMVSGSVVDTGTVRV 149 V+G + G + V Sbjct: 122 TTVTGVIRPDGQIEV 136 >gi|260767775|ref|ZP_05876710.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260617284|gb|EEX42468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|315179393|gb|ADT86307.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio furnissii NCTC 11218] Length = 218 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV +L + V I G+++ + + V R S VVG Sbjct: 84 WKVYVPVRLTLTVPM----VTALTPITRGQIITANDVTISMVDLLRFRRQGFSSQDLVVG 139 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T++ L VI + + V+ R V I M+I+T G ALSD ++GD I VK Sbjct: 140 AKTKKNLKLGDVIEQNDV---CVVCRNESVMIRAISAGMSITTKGTALSDGTLGDQIKVK 196 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V G V V Sbjct: 197 NDKSNRIIDGKVSGIGEVTV 216 >gi|149188060|ref|ZP_01866355.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] gi|148838048|gb|EDL54990.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] Length = 248 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV S+ + V + ++ G +++ + V + R VVG Sbjct: 114 WRLYVPVRMSISLPL----VTATRPLSRGNIVSSDDVTMSMVDKNRFRRQGFTEFDQVVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + V+ R KV I +G MTIST G AL+D + GD + VK Sbjct: 170 AKLKKNMNMGDVIERNDV---CVVCRNEKVVIRAVKGEMTISTKGTALTDGANGDQVRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + ++ G V + V Sbjct: 227 NDKSQRIIEGIVTGVAEITV 246 >gi|83955139|ref|ZP_00963795.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1] gi|83840468|gb|EAP79641.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1] Length = 227 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 62/137 (45%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 V A V VP+ I E++ + +++ + + +VG R Sbjct: 90 VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYDQLVGQQVR 149 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 R+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N+ + Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209 Query: 134 GVMVSGSVVDTGTVRVV 150 +S + G V VV Sbjct: 210 NKALSTIAMAAGVVEVV 226 >gi|154253002|ref|YP_001413826.1| flagellar basal body P-ring biosynthesis protein FlgA [Parvibaculum lavamentivorans DS-1] gi|154156952|gb|ABS64169.1| SAF domain protein [Parvibaculum lavamentivorans DS-1] Length = 326 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 64/146 (43%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 VR +L L + A + V + G+++ + +++ + + N S Sbjct: 163 VRAPAHDALSPLRRVTGRAYPVLDVPVLVRDMQPGDIVRHQDIDWVRMPANRVSQNMIAS 222 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 I +VG+ R + LS + P V+ + A+V + G +T++ G AL ++G Sbjct: 223 IDHLVGMSPRHPARAGEPLRLSDMQPPLVVEKNAQVDMTFVSGALTLTARGRALQSGAVG 282 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 D++ V NI + V G V +R+ Sbjct: 283 DIVNVLNIRSNRTVQGIVTGPNLIRI 308 >gi|254464729|ref|ZP_05078140.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium Y4I] gi|206685637|gb|EDZ46119.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium Y4I] Length = 140 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 4/128 (3%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 ++P I A E++N L DV G+ R L Sbjct: 16 PPAWADYLIPLRTIRAKEIVNPEDLALKNGEI----LGALSDPADVTGMEARVSLYAGRP 71 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +I R V +I QG +TI+ G AL + G+ + V N+ + V+G + Sbjct: 72 LRPGDIGPPAIIERNDLVTLIFRQGVLTIAAEGRALGRGAAGEAVRVMNLSSRTTVTGRI 131 Query: 142 VDTGTVRV 149 + G+V V Sbjct: 132 KEDGSVEV 139 >gi|288958676|ref|YP_003449017.1| FlgA protein [Azospirillum sp. B510] gi|288910984|dbj|BAI72473.1| FlgA protein [Azospirillum sp. B510] Length = 259 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 6/143 (4%) Query: 14 VLSLDSLFASVIGHAV------VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 V++ + V G A V S I G+V+ + V + A + + Sbjct: 110 VVTGSQVRLPVSGRAFGVVQIPVLSRRIIPGDVIGPGDIDWQDVRADQTTSDTAATDAQL 169 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 +G+ +R + + + L L P +I +GA V I LT +MT++T G AL D G+VI Sbjct: 170 IGMTPKRGVSTNQPVRLRDLQSPRMIDKGAMVTITLTTPSMTLTTQGKALQDGGKGEVIR 229 Query: 128 VKNIDTGVMVSGSVVDTGTVRVV 150 V N + +V +V V V Sbjct: 230 VVNTQSNRIVEATVAGPNVVAVA 252 >gi|308273545|emb|CBX30147.1| hypothetical protein N47_D29560 [uncultured Desulfobacterium sp.] Length = 251 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 56/129 (43%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + V V S +N G+V+ + + S + + + +G + + + + Sbjct: 121 WVDVFDSVVCASHNLNRGDVITAGDIHLERKNISRLNSDTLKDVDQAIGFMAKHDIKDND 180 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 + +L + ++++G V I+ G++ I+ G L +GD I V+N + V Sbjct: 181 CLKEWMLKKTPLVNKGDMVTILAEHGSIRITAPGRILEKGYMGDYIKVQNTMSKKSVYAK 240 Query: 141 VVDTGTVRV 149 +V+ TV V Sbjct: 241 IVNDSTVVV 249 >gi|152990360|ref|YP_001356082.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2] gi|151422221|dbj|BAF69725.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2] Length = 238 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + + VV I G ++ + L ++ G +++++G V R + + I Sbjct: 115 LANVVVAVHDIPRGSLIQKKDLAVQKMVTH---GKNYPDLQEIIGSVARVNIYKNRKITR 171 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 ++ Y + + VRII +G + I G+AL + GD+I VKNI T ++ V+ Sbjct: 172 YMIEPNYAVKKRQNVRIIYAKGPIRIELLGLALQNGKRGDIIKVKNISTNKVLECKVLSD 231 Query: 145 GTVRVVV 151 G V+ + Sbjct: 232 GVVQFLY 238 >gi|300024605|ref|YP_003757216.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium denitrificans ATCC 51888] gi|299526426|gb|ADJ24895.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium denitrificans ATCC 51888] Length = 153 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 3/149 (2%) Query: 4 VRFLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 ++ L +L+VL L ++ + VP+ VI G+++ L + QV S+ Sbjct: 2 MKSLALGTLFVLGLAGAASADDALRTVFVPNNVIYPGDMITADALVQRQVRVSSGNMAVF 61 Query: 62 -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + KD++G + RR LL + +P S + + +G ++I +++I GIA Sbjct: 62 GENPKDLIGKMARRTLLRNEYVPRSAVREQDAVLQGKPYKVIYNSESLSIVGEGIAQKAG 121 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++GD+I+V+N TGVM V T+ V Sbjct: 122 AVGDIISVRNTATGVMFKARVQADQTLAV 150 >gi|83944161|ref|ZP_00956617.1| Flageller protein FlgA [Sulfitobacter sp. EE-36] gi|83845028|gb|EAP82909.1| Flageller protein FlgA [Sulfitobacter sp. EE-36] Length = 227 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 63/137 (45%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 V A V VP+ I E++ + +++ + + + +VG R Sbjct: 90 VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYEQLVGQQVR 149 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 R+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N+ + Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209 Query: 134 GVMVSGSVVDTGTVRVV 150 +S + G V VV Sbjct: 210 NKALSTIAMAAGVVEVV 226 >gi|78485818|ref|YP_391743.1| flageller protein FlgA [Thiomicrospira crunogena XCL-2] gi|78364104|gb|ABB42069.1| Flageller basal body P-ring formation protein FlgA [Thiomicrospira crunogena XCL-2] Length = 245 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV +L V VV + I V+++ +K++ V + + +G Sbjct: 109 WKVYVTALVEGDVPV----VVTTKAILKQAVIHKEDVKQILVPYQKSKTGALIDVDSAIG 164 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + +R L P+ ++ + L PY++ V II GN+ + + G AL D + V+ Sbjct: 165 MRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVPVE 224 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ + ++ G V+ TV V Sbjct: 225 NLSSKKIIKGIVIAPNTVLV 244 >gi|108807169|ref|YP_651085.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Antiqua] gi|108812487|ref|YP_648254.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Nepal516] gi|145598614|ref|YP_001162690.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Pestoides F] gi|108776135|gb|ABG18654.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|108779082|gb|ABG13140.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Antiqua] gi|145210310|gb|ABP39717.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides F] Length = 251 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 124 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 183 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 184 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 242 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 243 DDGTIRIML 251 >gi|89075488|ref|ZP_01161899.1| flagellar basal body P-ring biosynthesis protein [Photobacterium sp. SKA34] gi|89048760|gb|EAR54331.1| flagellar basal body P-ring biosynthesis protein [Photobacterium sp. SKA34] Length = 235 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV L VV SV + G V+ +L V + RGN +++G Sbjct: 101 WQLYVPVNVQLTLP----KVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I + ++ R V I G + I T G ALSD +IG+ I V+ Sbjct: 157 SKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQ 213 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + M+ + G V V Sbjct: 214 NRTSRRMIDAIITAVGEVTV 233 >gi|320354343|ref|YP_004195682.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus propionicus DSM 2032] gi|320122845|gb|ADW18391.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus propionicus DSM 2032] Length = 278 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 +N G+V+N+S + MQ + Y S + ++G+ R + V+ + + P ++ Sbjct: 163 LNKGDVINDSNIAVMQQDIGGLNHPY-TSKEQLIGMQVARTVNAGTVLEQAHIAAPPIVK 221 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G V+I +G + +ST+G+A +D +G++I VKNI + ++ V G V V Sbjct: 222 DGEMVKIFARKGALQLSTSGLAKTDGRLGEIIQVKNIGSNKLIHCRVDGPGMVSV 276 >gi|260779351|ref|ZP_05888243.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] gi|260605515|gb|EEX31810.1| flagellar basal-body P-ring formation protein FlgA [Vibrio coralliilyticus ATCC BAA-450] Length = 265 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +++ + VV IN + ++ LK + T N ++ + V G+V R + Sbjct: 133 VAIKSALTLNVVVTKTGINRDQAISPMNLKLEKRTL-NREQDFFTQLSQVSGMVASRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ L ++++G +V I ++ T ST G+AL + G+ I V+N +G ++ Sbjct: 192 SGQILDPRKLESTPLVAKGNQVVITASKNGFTASTKGVALEQGTRGEQIDVQNSSSGKVI 251 Query: 138 SGSVVDTGTVRV 149 V V+ Sbjct: 252 KAVVTGLNQVQT 263 >gi|186895110|ref|YP_001872222.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis PB1/+] gi|186698136|gb|ACC88765.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis PB1/+] Length = 259 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 132 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 191 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 192 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 250 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 251 DDGTIRIML 259 >gi|312884838|ref|ZP_07744530.1| flagellar basal-body P-ring formation protein FlgA [Vibrio caribbenthicus ATCC BAA-2122] gi|309367490|gb|EFP95050.1| flagellar basal-body P-ring formation protein FlgA [Vibrio caribbenthicus ATCC BAA-2122] Length = 265 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 ++ +S+ VV IN + L + + T + + + + DV+ T R + Sbjct: 133 VTVKSSLTLDVVVAKTGINRDQALTPDSVHLVPRTLT-HQQEFYTHVSDVLEKTTTRRIR 191 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 H+I L+ P ++ G +V I ++ + +T GIAL + G+ I V+N+ +G + Sbjct: 192 SGHIITPKTLNAPAMVEVGNQVIISASKDRFSATTKGIALEKGNKGEQITVQNVSSGKTI 251 Query: 138 SGSVVDTGTVRV 149 +V+ V+ Sbjct: 252 QATVIGHNKVQT 263 >gi|94500235|ref|ZP_01306768.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp. RED65] gi|94427534|gb|EAT12511.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp. RED65] Length = 248 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++L V ++ A V VV + + L L +++R Y ++V+G Sbjct: 111 WALNVPVELNIKAPV----VVLNQPVPKDIELQARHLDLEIHNLADLRSGYFLKKENVIG 166 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++R L V+ ++ ++ +G +V I ++G M++ G AL+D G I VK Sbjct: 167 KQSKRGLAGQTVLNGRLVLPALLVKKGDRVIISASKGPMSVKMPGEALNDGREGRQIRVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ + ++ +V ++G V V Sbjct: 227 NLRSERIIRATVEESGVVSV 246 >gi|258621043|ref|ZP_05716077.1| flagellar protein, putative [Vibrio mimicus VM573] gi|258625271|ref|ZP_05720179.1| flagellar protein, putative [Vibrio mimicus VM603] gi|258582444|gb|EEW07285.1| flagellar protein, putative [Vibrio mimicus VM603] gi|258586431|gb|EEW11146.1| flagellar protein, putative [Vibrio mimicus VM573] Length = 255 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + + V+G Sbjct: 121 WRIYVPVRLTITIPLIT----AAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI S + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 177 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 234 NDKSNRIIDAQVSGVGEVTVA 254 >gi|22126394|ref|NP_669817.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis KIM 10] gi|45441413|ref|NP_992952.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|162419453|ref|YP_001606469.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis Angola] gi|165926043|ref|ZP_02221875.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165938691|ref|ZP_02227246.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|166010841|ref|ZP_02231739.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166210809|ref|ZP_02236844.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401018|ref|ZP_02306521.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420243|ref|ZP_02311996.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425844|ref|ZP_02317597.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469716|ref|ZP_02334420.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis FV-1] gi|270486649|ref|ZP_06203723.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|294504034|ref|YP_003568096.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis Z176003] gi|21959381|gb|AAM86068.1|AE013854_4 putative flagella basal body P-ring formation protein [Yersinia pestis KIM 10] gi|45436274|gb|AAS61829.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Microtus str. 91001] gi|162352268|gb|ABX86216.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Angola] gi|165913305|gb|EDR31927.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. IP275] gi|165922247|gb|EDR39424.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. F1991016] gi|165990185|gb|EDR42486.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. E1979001] gi|166207989|gb|EDR52469.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. B42003004] gi|166961938|gb|EDR57959.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049407|gb|EDR60815.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055243|gb|EDR65040.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262361780|gb|ACY58501.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis D106004] gi|262366084|gb|ACY62641.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis D182038] gi|270335153|gb|EFA45930.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis KIM D27] gi|294354493|gb|ADE64834.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis Z176003] Length = 254 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 127 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 186 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 187 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 245 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 246 DDGTIRIML 254 >gi|157373211|ref|YP_001471811.1| SAF domain-containing protein [Shewanella sediminis HAW-EB3] gi|157315585|gb|ABV34683.1| SAF domain [Shewanella sediminis HAW-EB3] Length = 248 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 4/142 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +SL+V + V V + + GE + ++ + + D++ Sbjct: 110 AWSLFVRAKV----KVTARLPVANRAMKRGEFIGAQDIEWHPIVLGASDRDLLTKTDDII 165 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G R L I L L+ P ++ G +V I + AG AL G+ I V Sbjct: 166 GRQVNRKLRRHRAIQLHHLNAPQWVNIGDRVIIEARSQGFYANMAGEALESGGEGEAIRV 225 Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150 KN+ +G +++ G V V Sbjct: 226 KNLSSGKVITAFPTAKGRVTTV 247 >gi|297570290|ref|YP_003691634.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio alkaliphilus AHT2] gi|296926205|gb|ADH87015.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio alkaliphilus AHT2] Length = 247 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 61/129 (47%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +G V+ + IN GEV++ L + + G+ + V G+ R L ++ Sbjct: 119 QRMGQVVMTARRINRGEVISRDDLVVHRRDIGMLDGSIINDPALVAGMQLRTTLQAGAIV 178 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L +P ++ RG +V I + G + ++ G + GD++ V+N+ + + VV Sbjct: 179 YQNLLEKPPLVRRGDRVTIRASTGRVLVNAPGEVREIGAEGDLVRVRNLMSRREIMARVV 238 Query: 143 DTGTVRVVV 151 ++G V + Sbjct: 239 NSGLVETEL 247 >gi|59712487|ref|YP_205263.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio fischeri ES114] gi|59480588|gb|AAW86375.1| flagellar P-ring chaperone FlgA [Vibrio fischeri ES114] Length = 255 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L + V ++ G ++ S L V + + ++ D+VG Sbjct: 121 WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 176 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R V I +G ++I T G AL D ++GD + VK Sbjct: 177 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 233 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +V+G V G + + Sbjct: 234 NDKSNRIVNGIVTSVGEISI 253 >gi|77747859|ref|NP_637319.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761201|ref|YP_243307.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. 8004] gi|188991646|ref|YP_001903656.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. campestris str. B100] gi|167733406|emb|CAP51607.1| Flagella basal body P-ring formation protein flgA precursor [Xanthomonas campestris pv. campestris] Length = 214 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I +GE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVLADPATAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L P ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|170748106|ref|YP_001754366.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium radiotolerans JCM 2831] gi|170654628|gb|ACB23683.1| FlgA, flagellar basal-body P-ring formation protein [Methylobacterium radiotolerans JCM 2831] Length = 142 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VP I AG+V+ + L+E R A + VG + RR LLP IP L Sbjct: 19 VPVATIYAGDVIKPTMLREQAFPEGYRPRLPVADTAARAVGRIARRTLLPGETIPSIALE 78 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +++RGA I+ + +TIST G AL++A++ + + V+N TG +V G V G VR Sbjct: 79 EAKLVTRGAPAVIVFEEHGVTISTVGTALANAAVNEAVNVRNAATGRVVQGIVQPDGRVR 138 Query: 149 V 149 Sbjct: 139 T 139 >gi|126738577|ref|ZP_01754282.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. SK209-2-6] gi|126720376|gb|EBA17082.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. SK209-2-6] Length = 138 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 4/138 (2%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 L + S + +VP I A E++ + L +V VVG+ Sbjct: 4 LLAFLIAVTAQSALADILVPLRTIRAKEIIQATDLTFKKVNLP----GALSDANVVVGME 59 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 R L P + + P ++ R V + QG +TI T G +L S G++I V N+ Sbjct: 60 ARVALYPGRPMRAGDIGPPAIVDRNDLVTLAYRQGGLTIITEGRSLGRGSEGEIIKVMNL 119 Query: 132 DTGVMVSGSVVDTGTVRV 149 + V+G + G+V V Sbjct: 120 ASRSTVTGRINADGSVEV 137 >gi|262166287|ref|ZP_06034024.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus VM223] gi|262170819|ref|ZP_06038497.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|261891895|gb|EEY37881.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus MB-451] gi|262026003|gb|EEY44671.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus VM223] Length = 247 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + + V+G Sbjct: 113 WRIYVPVRLTITIPLIT----AAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 168 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI S + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 169 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 225 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 226 NDKSNRIIDAQVSGVGEVTVA 246 >gi|264676566|ref|YP_003276472.1| flagellar protein FlgA [Comamonas testosteroni CNB-2] gi|299531290|ref|ZP_07044700.1| SAF domain-containing protein [Comamonas testosteroni S44] gi|262207078|gb|ACY31176.1| flagellar protein FlgA [Comamonas testosteroni CNB-2] gi|298720697|gb|EFI61644.1| SAF domain-containing protein [Comamonas testosteroni S44] Length = 252 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 73/149 (48%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV+ + +++++ + G A V I AG+ L+ +V + Sbjct: 108 LRCVQGSVPWNVFLPITVRAY----GPAWVAQGNIPAGKTLSAEDAAPAEVDWAEDSAPV 163 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + +D +G+V R L + +++ P + + G+ V++++ G +++ +G A++ A Sbjct: 164 FANAQDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMTAA 223 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G + V+ +D G +V+G+V +G V V Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251 >gi|51596007|ref|YP_070198.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 32953] gi|51589289|emb|CAH20910.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 32953] Length = 232 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 105 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 224 DDGTIRIML 232 >gi|78047591|ref|YP_363766.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036021|emb|CAJ23712.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 252 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RRVL Sbjct: 118 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRVL 177 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 178 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 237 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 238 VQGIVEASGTVVV 250 >gi|149366255|ref|ZP_01888290.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CA88-4125] gi|218928918|ref|YP_002346793.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis CO92] gi|229896238|ref|ZP_04511408.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides A] gi|229897173|ref|ZP_04512329.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897899|ref|ZP_04513050.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. India 195] gi|229902869|ref|ZP_04517986.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|115347529|emb|CAL20438.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CO92] gi|149292668|gb|EDM42742.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis CA88-4125] gi|229680316|gb|EEO76415.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Nepal516] gi|229688940|gb|EEO81005.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. India 195] gi|229693510|gb|EEO83559.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701161|gb|EEO89190.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis Pestoides A] gi|320015471|gb|ADV99042.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 232 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 105 QVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 224 DDGTIRIML 232 >gi|254516984|ref|ZP_05129042.1| SAF domain protein [gamma proteobacterium NOR5-3] gi|219674489|gb|EED30857.1| SAF domain protein [gamma proteobacterium NOR5-3] Length = 252 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LY+ + S + V + G +L L+ + ++ + + G Sbjct: 116 WTLYLRAEVSASLELP----VLVNALPRGTILAPGDLEMVTRRITSQANDIIVDPQMAAG 171 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + +R L + + P ++SRG V +I + + G A+ + GD + V Sbjct: 172 MELKRPLAAGSTLRHGHVDLPELVSRGQMVTLIAGGAGVEVRMQGKAMGSGAEGDRLLVT 231 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ +G V G V+ G++R+ Sbjct: 232 NLASGRRVEGLVLSDGSIRI 251 >gi|255021350|ref|ZP_05293398.1| Flagellar basal-body P-ring formation protein flgA [Acidithiobacillus caldus ATCC 51756] gi|254969213|gb|EET26727.1| Flagellar basal-body P-ring formation protein flgA [Acidithiobacillus caldus ATCC 51756] Length = 226 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV VV + + AG VL L M +++ G S+ + G Sbjct: 89 WTVYVPVRIVQ----SQKIVVAAHSLTAGTVLTAGDLALMPGNAASLAGTPLSSLSEATG 144 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + I S+L P + G V ++ + I+T A+ + G I V+ Sbjct: 145 RTLRFGTVAGQPITQSMLAAPIWVHGGNNVTLVAEGDGVRITTLAQAIENGHPGQSILVR 204 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ +G +V G+V TVRV Sbjct: 205 NLQSGRVVRGTVTAVATVRV 224 >gi|24459271|gb|AAL86624.1| FlgA [Vibrio fischeri ES114] Length = 248 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L + V ++ G ++ S L V + + ++ D+VG Sbjct: 114 WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R V I +G ++I T G AL D ++GD + VK Sbjct: 170 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +V+G V G + + Sbjct: 227 NDKSNRIVNGIVTSVGEISI 246 >gi|221069326|ref|ZP_03545431.1| flagella basal body P-ring formation protein FlgA [Comamonas testosteroni KF-1] gi|220714349|gb|EED69717.1| flagella basal body P-ring formation protein FlgA [Comamonas testosteroni KF-1] Length = 252 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 74/149 (49%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV+ + +++++ + + G A V I AG+ L+ +V + Sbjct: 108 LRCVQGSVPWNVFLPIIVRAY----GPAWVAQGNIPAGKTLSAEDAVPAEVDWAEDSAAV 163 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + +D +G+V R L + +++ P + + G+ V++++ G +++ +G A++ A Sbjct: 164 FANAEDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMAAA 223 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G + V+ +D G +V+G+V +G V V Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251 >gi|51246534|ref|YP_066418.1| flagellar protein (FlgA) [Desulfotalea psychrophila LSv54] gi|50877571|emb|CAG37411.1| related to flagellar protein (FlgA) [Desulfotalea psychrophila LSv54] Length = 315 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 I +V + L+ + ++ SNI S + G RR + D VI Sbjct: 189 AIAPVLVAREALRRDTELSPNNFSIIRRDISNISDPLF-SARQAEGQRLRRRIRKDDVIR 247 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 S L V+ RG +V+I L GN+ + T G+A +D + D I V+NI++ ++ VV Sbjct: 248 ASSLEHVPVVHRGDRVKIHLLSGNLQVVTLGVARADGGVHDFIRVQNINSKKIIYCQVVA 307 Query: 144 TGTVRV 149 G V+V Sbjct: 308 PGIVKV 313 >gi|121596113|ref|YP_988009.1| SAF domain-containing protein [Acidovorax sp. JS42] gi|222112268|ref|YP_002554532.1| flagella basal body p-ring formation protein flga [Acidovorax ebreus TPSY] gi|120608193|gb|ABM43933.1| SAF domain protein [Acidovorax sp. JS42] gi|221731712|gb|ACM34532.1| flagella basal body P-ring formation protein FlgA [Acidovorax ebreus TPSY] Length = 250 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 5/148 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV +++++ F G A V + + G VL+E E +V + Sbjct: 105 LRCVDGPTRWNVFLPITVKAF----GPAWVLAGNVGTGAVLSEQDAIEAEVDWAAEPAAI 160 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + KD VG R L + +++ P + G+ VR+++ ++++G A+S Sbjct: 161 VANPKDWVGQTATRPLSAGQALRQNMVRAPDLFKAGSAVRVVVQGPGYAVTSSGQAMSAG 220 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + G + V+ + G ++ G+V++ GT+ Sbjct: 221 AQGQSVRVR-MANGRIIGGTVLEDGTIE 247 >gi|262404546|ref|ZP_06081101.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC586] gi|262349578|gb|EEY98716.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC586] Length = 255 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + ++ + + ++ G++++ + V R + V+G ++ + Sbjct: 125 VPVRLTITIPLLTAANPLSRGQMISIQDVTISMVDLLRFRRQGFSTPDTVIGAKIKKNVR 184 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 VI S + ++ R V I + M+I+T G A+SD IG+ I VKN + ++ Sbjct: 185 VGDVIEQSDV---CIVCRNESVVIKAGRSGMSITTKGTAMSDGVIGEQIKVKNDKSNRII 241 Query: 138 SGSVVDTGTVRVV 150 V G V V Sbjct: 242 DAQVSGVGEVTVA 254 >gi|254504988|ref|ZP_05117139.1| SAF domain family [Labrenzia alexandrii DFL-11] gi|222441059|gb|EEE47738.1| SAF domain family [Labrenzia alexandrii DFL-11] Length = 326 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 55/132 (41%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 + A + +V + G+++ + L +++ + ++VG R Sbjct: 177 PLTVTGTAVEMIDVLVLGQPLKRGDIVQDGDLTTIRLPRLKVNTAALEDGTNIVGKAARV 236 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 L P + P ++ RG KV + G M +++ AL++ + GDVI V N+ + Sbjct: 237 NLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTNGAKGDVIDVMNLQSR 296 Query: 135 VMVSGSVVDTGT 146 +V +V G Sbjct: 297 RVVPATVTSRGQ 308 >gi|170024651|ref|YP_001721156.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis YPIII] gi|169751185|gb|ACA68703.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis YPIII] Length = 269 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 142 QVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 201 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 202 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 260 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 261 DDGTIRIML 269 >gi|322421661|ref|YP_004200884.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M18] gi|320128048|gb|ADW15608.1| flagella basal body P-ring formation protein FlgA [Geobacter sp. M18] Length = 238 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + VV + + GEVL+ S L ++ + ++G Y I + GL + L Sbjct: 105 VLVEVEALAEMVVAARTLERGEVLSASDLAVVKRDLAQVQGRYFKEIGEAAGLRVKSTLK 164 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + L + ++ G V I+ + I+ G A + GD+I V+N+ + + Sbjct: 165 ANSPVRKDNLEKVPIVKSGQVVTIVAENDVVRITATGRAKVAGAQGDLITVQNLSSQKEI 224 Query: 138 SGSVVDTGTVRV 149 + VVD TV+V Sbjct: 225 AARVVDAATVKV 236 >gi|209884525|ref|YP_002288382.1| flageller protein FlgA [Oligotropha carboxidovorans OM5] gi|209872721|gb|ACI92517.1| flageller protein FlgA [Oligotropha carboxidovorans OM5] Length = 351 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 1/131 (0%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 FA A V I E++ S L + + + G+ ++ +G+ TRR + Sbjct: 195 FAVETVQAAVLMRPIGRNEIIKASDLNVERRPKAEVGGDAI-PLEQAIGMQTRRAMRIGD 253 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 + S L + +++R + ++ + +++ G AL + GD ++V N+ + V G Sbjct: 254 ALRSSDLAKADLVTRDQTISLVYETPGLYLTSRGKALEAGTKGDTVSVLNLQSKRTVQGI 313 Query: 141 VVDTGTVRVVV 151 VV G V ++ Sbjct: 314 VVGPGQVAIIA 324 >gi|85712248|ref|ZP_01043299.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina baltica OS145] gi|85693875|gb|EAQ31822.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina baltica OS145] Length = 233 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 + + YV + +V + + G ++ S L +++V S +R N Sbjct: 94 QSQPAWRTYVPVRIYRYKTVWA----AATPMQPGHLIAASDLTQVEVDVSQVRANLFEDN 149 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + ++G T+R + I ++ G +V I+ + I+ G AL+D G+ Sbjct: 150 QLLIGSRTKRRVAAGKAIEARDT---CLVCEGEQVTIVAKSKALKITATGEALADGLQGE 206 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 +AVKN+ + + V V V Sbjct: 207 SVAVKNVRSNKSLEAIVTGLNEVTV 231 >gi|254477189|ref|ZP_05090575.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp. R11] gi|214031432|gb|EEB72267.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp. R11] Length = 138 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +VP I A E++ L +V+G R L + Sbjct: 15 PAWAEILVPVRTIRAKEIVTAEDLALKSADV----LGALSDPSEVIGKEARVALYAGRPV 70 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + P ++ R V I T+G +TI G +L + G+ I V N+ + V+G + Sbjct: 71 RAGDVGPPAIVERNDLVTIRFTRGGLTIMAEGRSLGRGADGEAIRVMNLSSRTTVTGRIA 130 Query: 143 DTGTVRV 149 GTV V Sbjct: 131 SDGTVEV 137 >gi|323492342|ref|ZP_08097495.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] gi|323313389|gb|EGA66500.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio brasiliensis LMG 20546] Length = 216 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 1/130 (0%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 S+ +++ + +V IN + + + Q T N ++ V + R + Sbjct: 84 VSIKSTLTLNVLVAKSPINRDDSITRDLVTIEQRTL-NREQDFYTQFDQVRYKLATRRIR 142 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 +I L P ++++G +V I +G + +T G+AL + G I V+NI +G +V Sbjct: 143 SGQIIDGRKLQTPALVAKGNQVIISAGKGGFSATTKGVALEQGAHGQQIEVRNISSGKVV 202 Query: 138 SGSVVDTGTV 147 V V Sbjct: 203 KAVVTGLNQV 212 >gi|117926378|ref|YP_866995.1| flagellar basal body P-ring biosynthesis protein-like protein [Magnetococcus sp. MC-1] gi|117610134|gb|ABK45589.1| Flagellar basal body P-ring biosynthesis protein-like protein [Magnetococcus sp. MC-1] Length = 236 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 52/121 (42%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V + +++ + + S Y ++++VG R + + + S Sbjct: 111 TVAVLKRQLKRDDIVALGDIDWQTIQISREGFRYVSDVREIVGKAASRPVRANIALQASW 170 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 P + RG +VR++L G + I+T G+A D +G+ I V+N+ + V+ G Sbjct: 171 FEEPVAVERGDRVRVLLKDGALVINTVGVAGKDGRVGEAILVRNLSSNKSFLARVMAPGQ 230 Query: 147 V 147 V Sbjct: 231 V 231 >gi|316932822|ref|YP_004107804.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris DX-1] gi|315600536|gb|ADU43071.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris DX-1] Length = 343 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + + EV+ S + + S + + A S +G+ R+ L ++ + L Sbjct: 208 ATVLTRPVQRNEVIKTSDIATERRPKSEVASDAA-SRDGAIGMQARQPLRSGQILRNADL 266 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P +++R V +I + ++ G AL + GDV+ V N+ + ++G+V+ G V Sbjct: 267 AKPDLVTRDQSVTLIYRTAGIYLTARGKALETGAEGDVVNVLNLQSKRTIAGTVIGRGQV 326 Query: 148 RVVV 151 + Sbjct: 327 SITA 330 >gi|115523180|ref|YP_780091.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisA53] gi|115517127|gb|ABJ05111.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53] Length = 161 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLLPD 79 A VP I G+++ + + + N+ G + VVG RR LLP Sbjct: 30 AEEPVRFPVPVTTIYPGDLIKDEMI-IDRAFAPNMPGVAAFVGDRLTVVGRTARRTLLPG 88 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 +IP + + +++RG+ V++++ G ++I T G +L G I ++N+DTGV + G Sbjct: 89 RLIPNNAVEDQKIVNRGSVVKVVIEDGALSIVTYGSSLQSGGPGAFIQLRNLDTGVTIRG 148 Query: 140 SVVDTGTVRV 149 V G+VR+ Sbjct: 149 IVQPDGSVRI 158 >gi|153947896|ref|YP_001401294.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudotuberculosis IP 31758] gi|152959391|gb|ABS46852.1| flagella basal body P-ring formation protein FlgA [Yersinia pseudotuberculosis IP 31758] Length = 232 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + AGE ++ ++ Q + G V++R + + Sbjct: 105 QVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQRQINAGQPL 164 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +++ G V ++ +++ G A+++ + + I V+ + +G +VSG+V Sbjct: 165 TRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVA 223 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 224 DDGTIRIML 232 >gi|326319093|ref|YP_004236765.1| flagella basal body P-ring formation protein FlgA [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375929|gb|ADX48198.1| flagella basal body P-ring formation protein FlgA [Acidovorax avenae subsp. avenae ATCC 19860] Length = 259 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV +++++ + G A V + + +G VL E+ + +V + Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + ++ VG V R L+ + ++ P GA VR++ ++++AG A++ Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGAPVRVVAQGRGYSVTSAGQAVTAG 229 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 SIG+ + V+ +D G +++G V + GTV V Sbjct: 230 SIGETVRVR-MDNGRVIAGIVSNDGTVEV 257 >gi|90423016|ref|YP_531386.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisB18] gi|90105030|gb|ABD87067.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18] Length = 370 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A V + + EVL S + + + I G+ A S D VG+ RR L + L Sbjct: 217 DAAVLARGVERNEVLKSSDVVVERRPKAEIGGDAA-SRDDAVGMQARRQLRAGQALRLVD 275 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L +P ++SR V +I + ++ G AL + GDV+ V N+ + V+G+V+ G Sbjct: 276 LSKPDLVSRDQAVTLIYQSTGLYLTVRGKALESGTEGDVVNVINLQSKRTVAGTVIGRGQ 335 Query: 147 VRV 149 V V Sbjct: 336 VAV 338 >gi|294625269|ref|ZP_06703908.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600443|gb|EFF44541.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 268 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 134 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 193 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 194 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 253 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 254 VQGIVEASGTVVV 266 >gi|56460258|ref|YP_155539.1| flagellar basal body P-ring biosynthesis protein FlgA [Idiomarina loihiensis L2TR] gi|56179268|gb|AAV81990.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina loihiensis L2TR] Length = 240 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + YV + +V V + + G++++ES L +V + +R N + +VG Sbjct: 106 WRTYVPVRIYRYKNV----VTAASPMAPGQMISESDLVFSEVDLNRVRSNVFTDMTALVG 161 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + I S ++ G V I+ + I+ AG AL+D G+ + V+ Sbjct: 162 ARIKKRIAAGQAISASDT---CLVCEGQSVTIVAQDKTLRITAAGRALADGLKGESVVVE 218 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + + V V V Sbjct: 219 NARSNKSIQAVVTGLNEVTV 238 >gi|126730133|ref|ZP_01745945.1| flagellar basal-body P-ring formation protein FlgA [Sagittula stellata E-37] gi|126709513|gb|EBA08567.1| flagellar basal-body P-ring formation protein FlgA [Sagittula stellata E-37] Length = 138 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + I ++++ ++ Q T S S+ DV+G +R V+ P + Sbjct: 15 AQAETVVATQTIRPQQIISPDAVRMDQATIS----GAYVSLDDVIGQESRYVIYPGRPLM 70 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + + P ++ R V +I G + I G AL + G+ I V N D+ ++ G++ Sbjct: 71 IGAVGEPALVDRNQIVELIYAHGGLRILAEGRALDRGAEGERIRVMNSDSRTVLFGTIQP 130 Query: 144 TGTVRV 149 G+V V Sbjct: 131 DGSVLV 136 >gi|84624083|ref|YP_451455.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368023|dbj|BAE69181.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 214 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|292489137|ref|YP_003532024.1| flagella basal body P-ring formation protein FlgA [Erwinia amylovora CFBP1430] gi|292900256|ref|YP_003539625.1| flagella basal body P-ring formation protein [Erwinia amylovora ATCC 49946] gi|291200104|emb|CBJ47230.1| flagella basal body P-ring formation protein [Erwinia amylovora ATCC 49946] gi|291554571|emb|CBA22188.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia amylovora CFBP1430] gi|312173295|emb|CBX81550.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia amylovora ATCC BAA-2158] Length = 234 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + AG V+ ++ + + I +VG T R L I + L + Sbjct: 112 VAKKNLPAGSVIRADDIETHAGSLDHQPAGILFDINQIVGQTTTRALNAGSPIVQNQLRQ 171 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +++ G V I+ I + G AL++AS+ D + V+ + TG +SG V G V + Sbjct: 172 QWLLHAGQMVDIVTHGEGFRIRSQGKALANASVDDTLKVQ-MRTGRTISGKVAHDGQVEI 230 Query: 150 VVK 152 +++ Sbjct: 231 LLQ 233 >gi|206889894|ref|YP_002249847.1| flagella basal body P-ring formation protein FlgA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741832|gb|ACI20889.1| flagella basal body P-ring formation protein FlgA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 231 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 60/129 (46%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ + + + GEV+ E ++ E++ S + ++G V +R L +I Sbjct: 103 EVLTRVYITQIPLKRGEVITEEKIMEIKQPLSRLPVGAITDKNLLIGKVVKRSLTRGLII 162 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L+ + +G+KV +I+ G + I T G+ SDA +G V+ TG + G +V Sbjct: 163 KEDYLYSGMPVKKGSKVDVIINTGQVMIMTEGVLKSDAVVGGNARVQCFQTGKEIVGKLV 222 Query: 143 DTGTVRVVV 151 VRV + Sbjct: 223 GKDKVRVSL 231 >gi|294664586|ref|ZP_06729927.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605643|gb|EFF48953.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 268 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 134 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKAARRIL 193 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 194 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 253 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 254 VQGIVEASGTVVV 266 >gi|317492432|ref|ZP_07950861.1| flagella basal body P-ring formation protein FlgA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919771|gb|EFV41101.1| flagella basal body P-ring formation protein FlgA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 226 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 5/151 (3%) Query: 5 RFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 R+ L D + V G V S ++ G+ ++ + MQ + Sbjct: 77 RWGTLSVLVQCPQDKRYLQVEVQVTGGYPVASAPLSRGQHISAADFNIMQGRLDRLPTGS 136 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 I + V R L + S++ R ++I G V+I+ +++ G AL++A Sbjct: 137 IMEISQLDNAVLTRDLAAGQSVTSSMMRRTWIIKAGQSVQILAQGDGFNVTSEGKALNNA 196 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +I D + V+ + +G ++SG + GT+ +++ Sbjct: 197 AIADNVRVR-LASGQIISGKATEQGTIELLM 226 >gi|120613055|ref|YP_972733.1| SAF domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591519|gb|ABM34959.1| SAF domain protein [Acidovorax citrulli AAC00-1] Length = 259 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV +++++ + G A V + + +G VL E+ + +V + Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + ++ VG V R L+ + ++ P G+ VR++ ++++AG A++ Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGSPVRVVAQGRGYSVTSAGQAVTAG 229 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 SIG+ + V+ +D G +++G V + GTV V Sbjct: 230 SIGETVRVR-MDNGRIIAGIVSNDGTVEV 257 >gi|170737034|ref|YP_001778294.1| flagella basal body P-ring formation protein FlgA [Burkholderia cenocepacia MC0-3] gi|169819222|gb|ACA93804.1| flagella basal body P-ring formation protein FlgA [Burkholderia cenocepacia MC0-3] Length = 252 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 1/129 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + A + +V + + +G LNE+ K+ V + + + VG + RR + Sbjct: 119 VKAHIDAPVLVATTALRSGHTLNEADFKQ-DVRDFALTPDALTDPALAVGRMLRRTVKAG 177 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 VI +L+ I RG V+I G + +S G A+ + ++ +VI VKN TG ++ Sbjct: 178 QVIQARLLNGAETIRRGQAVQIEANTGPIRVSVPGTAMQNGAVDEVIRVKNASTGKVIFA 237 Query: 140 SVVDTGTVR 148 V TV Sbjct: 238 RVTGADTVE 246 >gi|319787126|ref|YP_004146601.1| flagella basal body P-ring formation protein FlgA [Pseudoxanthomonas suwonensis 11-1] gi|317465638|gb|ADV27370.1| flagella basal body P-ring formation protein FlgA [Pseudoxanthomonas suwonensis 11-1] Length = 206 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 4/141 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + LYV V VV + + AGE L L Q S + G +G Sbjct: 69 WRLYVPVRQRRSQQV----VVLARGVAAGETLTADALATAQRDASRLAGATLSDPAQALG 124 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V RR L+ V+ L P ++ RG +V ++ +G + + AG AL DA + + ++V+ Sbjct: 125 QVARRTLVAGSVLGAGDLASPRIVRRGDQVALVSRRGGVEVRVAGRALGDAGVDERVSVE 184 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N+ + ++ G V G V V Sbjct: 185 NLSSRRILQGRVAPGGDVLVA 205 >gi|78221653|ref|YP_383400.1| flageller protein FlgA [Geobacter metallireducens GS-15] gi|78192908|gb|ABB30675.1| flagellar protein FlgA [Geobacter metallireducens GS-15] Length = 236 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 59/132 (44%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + +G VV + G+V+ + + + S + G S +V+G R + Sbjct: 103 VPVEVEALGDTVVVLRALERGDVIGAADVTVQRRDLSTLTGRVYRSADEVIGKRARMPVR 162 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 + + L + ++ G V I++ M ++ G A + + GD++ V+N+ + V Sbjct: 163 ANMPLRGDQLEKVPLVKSGQLVTILVENQAMRLTATGKARGNGAEGDIVMVQNLGSLKEV 222 Query: 138 SGSVVDTGTVRV 149 V+D GTV+V Sbjct: 223 PARVIDAGTVQV 234 >gi|148256793|ref|YP_001241378.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium sp. BTAi1] gi|146408966|gb|ABQ37472.1| putative flagellar protein FlgA [Bradyrhizobium sp. BTAi1] Length = 355 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 55/117 (47%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 ++ E++ S L+ + + + G S + VG+ RR + + + L +P + Sbjct: 205 RNVDRNEMIRSSDLQIERRPRAELAGGEPASRELAVGMQMRRAVRAGQALKTTDLAKPDL 264 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + R V +I + ++T G AL + GDV++V N+ + V+G V G V V Sbjct: 265 VQRDQTVTLIYQTAGIYLTTRGKALEAGTDGDVVSVLNLQSKRTVTGRVTGRGQVSV 321 >gi|149911708|ref|ZP_01900316.1| flagella basal body P ring formation protein FlgA [Moritella sp. PE36] gi|149805238|gb|EDM65255.1| flagella basal body P ring formation protein FlgA [Moritella sp. PE36] Length = 233 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + L+V V VV + ++ G +L ++ K + +R Y + V Sbjct: 99 WQLHVPVKIIRLVPV----VVSNRPLSKGSLLTKNNTKIEYMNRVLLRSGYISDLTFVNR 154 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R L +I + ++ +G V + + GN+T+ T G+AL++ +G+ I V+ Sbjct: 155 ARLKRQLSSGQMISTRDI---CLVCKGENVTLTSSVGNLTVKTDGMALANGILGEKIKVR 211 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +VSG V G +++ Sbjct: 212 NSKSKRIVSGIVQAAGIIQI 231 >gi|197334457|ref|YP_002156706.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri MJ11] gi|197315947|gb|ACH65394.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri MJ11] Length = 211 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV L + V ++ G ++ S L V + + ++ D+VG Sbjct: 77 WKVYVPVKTELMMPL----VTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 132 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + + + + ++ R V I +G ++I T G AL D ++GD + VK Sbjct: 133 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 189 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +V+G V G + + Sbjct: 190 NDKSNRIVNGIVTSVGEISI 209 >gi|149203124|ref|ZP_01880095.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] gi|149143670|gb|EDM31706.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] Length = 138 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 SL + L + ++ + I E+L + L Q + + +++D++ Sbjct: 1 MRSLAFMLGIFLSGPALADVILATRTIRPQEILGPADLLLQQGESHS-----DVALEDLI 55 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G R L P + + P V+ R V +I +G + I T G +L A IGD + V Sbjct: 56 GQEARVALYPGRPVRQGDVGPPTVVERNQVVPLIYLRGGLEIMTEGRSLDRAGIGDHVRV 115 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 N+ + VSG V G + V Sbjct: 116 MNLASRATVSGRVTANGQILV 136 >gi|261211328|ref|ZP_05925616.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC341] gi|260839283|gb|EEX65909.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp. RC341] Length = 218 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + + V+G Sbjct: 84 WRVYVPVRLTITIPLIT----AANPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPESVIG 139 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 140 AKIKKNIRIGDVI---DQKDVCIVCRNESVVIRAGKSGMSITTKGTAMSDGILGEQIKVK 196 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 197 NDKSNRIIDAQVSGVGEVTVA 217 >gi|58582190|ref|YP_201206.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576751|ref|YP_001913680.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576942|ref|YP_001913871.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426784|gb|AAW75821.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188521203|gb|ACD59148.1| flagella basal body P-ring formation protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521394|gb|ACD59339.1| flagella basal body P-ring formation protein FlgA [Xanthomonas oryzae pv. oryzae PXO99A] Length = 214 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|166712067|ref|ZP_02243274.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 214 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|255264087|ref|ZP_05343429.1| flagella basal body P-ring formation protein FlgA [Thalassiobium sp. R2A62] gi|255106422|gb|EET49096.1| flagella basal body P-ring formation protein FlgA [Thalassiobium sp. R2A62] Length = 137 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 +++SL L A V V+ S I ++ S + A VVG+ Sbjct: 3 WLISLLFLAAPVSAETVLASRTIRPQTIIAPSDIVLHSANTEWA----ADHPDLVVGMEA 58 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 + L I + + P + R + I + G +T+ T +LS GD I V N+ Sbjct: 59 KVALYAGRPIRVEDVGPPATVERNQIILITFSNGGLTMKTEARSLSRGGPGDRIRVMNLA 118 Query: 133 TGVMVSGSVVDTGTVRV 149 + +S ++ GTV V Sbjct: 119 SRATISARILTDGTVSV 135 >gi|160896083|ref|YP_001561665.1| SAF domain-containing protein [Delftia acidovorans SPH-1] gi|160361667|gb|ABX33280.1| SAF domain [Delftia acidovorans SPH-1] Length = 254 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C++ + +++++ + G A V + +G L+ + +V + Sbjct: 110 LRCLQGAVAWNVFLPITVKAW----GPAWVLQNGVPSGRPLSADDAVQAEVDWAEESAAV 165 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + +D VGLV R L + ++L P + + GA+VR+++ G +++++G A+S A Sbjct: 166 YANQQDWVGLVASRPLAAGQALRQNMLRTPALFAVGAEVRVLVNGGGFSVTSSGKAMSAA 225 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G + V+ +D G ++SG V G V V Sbjct: 226 GEGQTVRVR-MDNGRLISGVVNPEGVVLV 253 >gi|224825773|ref|ZP_03698877.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] gi|224601997|gb|EEG08176.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] Length = 240 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 ++ ++ A + +V + ++AG+VL ++ Q + HS + VGL +R Sbjct: 107 TVYTVRAELDARQLVATRDLDAGKVLGADDVEWAQRPVYELEEG-LHSPAEAVGLSSRSA 165 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L + +L ++ RG V I+ ++ + ++ G +L DVI V+N+ +G Sbjct: 166 LRRGQPLRRKLLEAVVLVRRGDAVEIVASKEAIVVTAPGESLESGRRNDVIRVRNVGSGK 225 Query: 136 MVSGSVVDTGTV 147 ++ V + G V Sbjct: 226 ILRARVTEAGRV 237 >gi|71280005|ref|YP_268215.1| putative flagellar basal-body P-ring formation protein FlgA [Colwellia psychrerythraea 34H] gi|71145745|gb|AAZ26218.1| putative flagellar basal-body P-ring formation protein FlgA [Colwellia psychrerythraea 34H] Length = 230 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 11/146 (7%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 + +++ ++ S V + ++ I+ G+ L+ES ++ + + IRGN Sbjct: 92 ESIKWKIYLSAKV--------EITKAVLIAKNTISKGDKLDESNVELAFIAINKIRGNKL 143 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 V G ++ + I + +I +G V II++ N +I T G+ALS + Sbjct: 144 TDTNIVFGAKAKKRIAKGRAISKRSI---CLICKGDVVTIIVSSDNFSIKTQGVALSSGN 200 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTV 147 I + I VKN + +++ V V Sbjct: 201 INEQIRVKNTRSKKVITPRVKGINQV 226 >gi|325921019|ref|ZP_08182901.1| flagella basal body P-ring formation protein FlgA [Xanthomonas gardneri ATCC 19865] gi|325548501|gb|EGD19473.1| flagella basal body P-ring formation protein FlgA [Xanthomonas gardneri ATCC 19865] Length = 214 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSSNDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|260574400|ref|ZP_05842404.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp. SW2] gi|259023296|gb|EEW26588.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp. SW2] Length = 139 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 5/136 (3%) Query: 15 LSLDSLFAS-VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 L+L LF + ++V + I A VL E+ + + +GL R Sbjct: 4 LALILLFPTLAQADSLVATRTIRAQTVLAETDMTLVAADIP----GALTDTGAALGLEAR 59 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133 L I L P ++ R V + G +TI T G A++ +GDVIAV N+D+ Sbjct: 60 TTLYAGRPIRPGDLGAPAIVERNQVVSLAYHAGPLTILTEGRAMARGGVGDVIAVMNLDS 119 Query: 134 GVMVSGSVVDTGTVRV 149 VSG + G V+V Sbjct: 120 RTTVSGRIDAEGMVQV 135 >gi|209695768|ref|YP_002263698.1| flagellar basal body P-ring biosynthesis protein FlgA [Aliivibrio salmonicida LFI1238] gi|208009721|emb|CAQ80025.1| polar flagellar basal-body P-ring formation protein FlgA [Aliivibrio salmonicida LFI1238] Length = 248 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + A ++ V + ++ G L+ + L V + R + D++G Sbjct: 114 WKIYVP----VKAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGYINTNDLIG 169 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + V+ + + ++ R V I +G ++I T G AL DA++GD + V+ Sbjct: 170 SRIKRSVRAGDVVEKNDI---CMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQ 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + +++G V G + + Sbjct: 227 NNKSKRIINGVVTAVGEISI 246 >gi|238788311|ref|ZP_04632105.1| Flagella basal body P-ring formation protein flgA [Yersinia frederiksenii ATCC 33641] gi|238723557|gb|EEQ15203.1| Flagella basal body P-ring formation protein flgA [Yersinia frederiksenii ATCC 33641] Length = 226 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + +G + ++ Q + G V+ R + + Sbjct: 99 QVSGHYAVAARRLPSGAKITPEDIEMKQGRLDTLPPGALLEPHFAQGAVSLRQINAGQPL 158 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G V+++ +++ G A+++ ++ D + V+ + +G +VSG+V Sbjct: 159 TRNMLRRLWVIKAGQDVQVLAQGEGFNVNSNGKAMNNGAVQDNVRVR-MASGQIVSGTVA 217 Query: 143 DTGTVRVVV 151 + GT+R+++ Sbjct: 218 EDGTIRIML 226 >gi|325927870|ref|ZP_08189094.1| flagella basal body P-ring formation protein FlgA [Xanthomonas perforans 91-118] gi|325541710|gb|EGD13228.1| flagella basal body P-ring formation protein FlgA [Xanthomonas perforans 91-118] Length = 214 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RRVL Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRVL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|289666042|ref|ZP_06487623.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670501|ref|ZP_06491576.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 214 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|163738059|ref|ZP_02145475.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107] gi|161388675|gb|EDQ13028.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107] Length = 138 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +VP I A E++ L Q V+G R L + Sbjct: 15 PAWADILVPVRTIRAKEIVTAEDLVLKQAEV----LGAISDPSLVIGQEARVALYAGRPM 70 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + P ++ R V I +G +TI G +L + G+ I V N+ + +SG + Sbjct: 71 RPGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130 Query: 143 DTGTVRV 149 GTV V Sbjct: 131 ADGTVEV 137 >gi|121607565|ref|YP_995372.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552205|gb|ABM56354.1| SAF domain [Verminephrobacter eiseniae EF01-2] Length = 281 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 5/147 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + CV + +++++ + F G A V + + G +L E +V + Sbjct: 136 LRCVAGVSAWNVFLPIAIAAF----GPAWVLTRNVAPGALLTAEDATEAEVDWAAEPAPV 191 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + G V R L V+ +++ P++ GA+V++ + + AG ALS Sbjct: 192 LANPALWQGQVAARPLRAGQVLRQTMVRAPWLFPAGAQVKVQVLGPGYAVVAAGQALSAG 251 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + G ++ V+ +D G +VSG V GT+ Sbjct: 252 ATGQMVRVR-MDNGRIVSGMVNAAGTI 277 >gi|293395579|ref|ZP_06639862.1| flagella basal body P-ring formation protein FlgA [Serratia odorifera DSM 4582] gi|291421898|gb|EFE95144.1| flagella basal body P-ring formation protein FlgA [Serratia odorifera DSM 4582] Length = 217 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+G +V + I+AG +L + + + + +G V+ R L P + Sbjct: 90 QVVGRYLVSARSISAGSILTAADVTLKTGRLDTLPPRMLVDSRRALGAVSLRNLGPGQPL 149 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 LS+L R +VI G V++ +IS AG A+++A+ D + V+ + +G +VSG Sbjct: 150 TLSMLRRAWVIKAGQPVQVTAQGEGFSISGAGKAMNNAAADDRVRVR-MSSGQIVSGIAG 208 Query: 143 DTGTVRVVV 151 D G +RV + Sbjct: 209 DDGAIRVTL 217 >gi|283478798|emb|CAY74714.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia pyrifoliae DSM 12163] Length = 223 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G ++ + ++ GEV++ S ++ + D G + R + Sbjct: 93 VQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAITAG 152 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V+G Sbjct: 153 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVTG 211 Query: 140 SVVDTGTVRVVV 151 + G + + + Sbjct: 212 KIDADGNILISL 223 >gi|259908816|ref|YP_002649172.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring [Erwinia pyrifoliae Ep1/96] gi|224964438|emb|CAX55947.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring [Erwinia pyrifoliae Ep1/96] Length = 222 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G ++ + ++ GEV++ S ++ + D G + R + Sbjct: 92 VQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAITAG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V+G Sbjct: 152 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210 Query: 140 SVVDTGTVRVVV 151 + G + + + Sbjct: 211 KIDADGNILISL 222 >gi|325918872|ref|ZP_08180949.1| flagella basal body P-ring formation protein FlgA [Xanthomonas vesicatoria ATCC 35937] gi|325534909|gb|EGD06828.1| flagella basal body P-ring formation protein FlgA [Xanthomonas vesicatoria ATCC 35937] Length = 214 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 59/133 (44%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I+AGE ++ + + + + I G VG RRVL Sbjct: 80 FVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKSARRVL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + +G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|255747098|ref|ZP_05421043.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera CIRS 101] gi|262161358|ref|ZP_06030468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae INDRE 91/1] gi|262167771|ref|ZP_06035473.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC27] gi|262191695|ref|ZP_06049871.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae CT 5369-93] gi|255735500|gb|EET90900.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera CIRS 101] gi|262023836|gb|EEY42535.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae RC27] gi|262028669|gb|EEY47323.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae INDRE 91/1] gi|262032434|gb|EEY50996.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae CT 5369-93] gi|327484722|gb|AEA79129.1| Flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae LMA3894-4] Length = 201 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV ++ +I + ++ G++++ + V R + ++V+G Sbjct: 67 WRVYVPVRLTITIPLIT----AATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 122 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK Sbjct: 123 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 179 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + ++ V G V V Sbjct: 180 NDKSNRIIDAQVSGVGEVTVA 200 >gi|33573139|emb|CAE36786.1| flagella basal body P-ring formation protein [Bordetella parapertussis] Length = 291 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y + S V G V + I G+ + + L + ++G Sbjct: 155 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 210 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + I + L +SRG VRI +S+ G AL +A + V+ Sbjct: 211 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPSATVQVR 270 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V G V + + Sbjct: 271 -TASGQVVSGIVQAAGLVEIQL 291 >gi|77748624|ref|NP_642314.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas axonopodis pv. citri str. 306] Length = 214 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 57/133 (42%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V I AGE ++ + + + + I G VG RR+L Sbjct: 80 FVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRIL 139 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L ++ RG V ++ G + + G ALSDA + ++V+N + + Sbjct: 140 PAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAGENERVSVENSSSRRV 199 Query: 137 VSGSVVDTGTVRV 149 V G V +GTV V Sbjct: 200 VQGIVEASGTVVV 212 >gi|34496454|ref|NP_900669.1| flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] gi|34102307|gb|AAQ58673.1| probable flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] Length = 221 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SL + + VV + + AGE ++ ++ + ++N + GN VG Sbjct: 85 WSLRIPVRINEK----RLGVVLNRAMMAGETISGGDVRLVDISNPALAGNVLTDASQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V R + ++ PY++ +V++ + G AL +A+ GD I+V+ Sbjct: 141 QVLRSGAPAGAWVRNFMVRAPYLVRSNQRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR 200 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 + TG +V G V G+V VV Sbjct: 201 -LSTGRVVLGVVQADGSVAVV 220 >gi|149191168|ref|ZP_01869426.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii AK1] gi|148835006|gb|EDL51985.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii AK1] Length = 235 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+ S SL AV + G+ L+ S + + + + +VVG Sbjct: 100 WSISATSSASL----TIWAVTADKALRKGQRLSPSDIAIKPIKLYTDKKVFFK-PSEVVG 154 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + ++ S L+ Y + +G V ++ + + T G AL +GD ++V+ Sbjct: 155 SKLKRSVKKGELLTTSRLYLDYDVEKGQAVDVVYQSETIRLETLGTALESGLVGDTVSVQ 214 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N +G ++ G V VRV Sbjct: 215 NQQSGKLLRGVVTKKNQVRV 234 >gi|148266115|ref|YP_001232821.1| SAF domain-containing protein [Geobacter uraniireducens Rf4] gi|146399615|gb|ABQ28248.1| SAF domain protein [Geobacter uraniireducens Rf4] Length = 238 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 59/132 (44%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + VV + GEV+ + + + ++G + ++ VG R + Sbjct: 105 VKVEVEALADVVVAVRPLERGEVIGNGDIAVQKRDLAKMQGKTCRTAEEAVGKRVRTAIR 164 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 ++ I L + ++ G V I++ + I+ AG A + + GD + V+N+ + V Sbjct: 165 GNNPIRADYLEKISLVKSGQLVTIVVENDALRITAAGRARNSGAEGDTVMVQNLASQKEV 224 Query: 138 SGSVVDTGTVRV 149 + VVD TV+V Sbjct: 225 AARVVDATTVKV 236 >gi|115523555|ref|YP_780466.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisA53] gi|115517502|gb|ABJ05486.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53] Length = 352 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + EV+ S + + + + G+ V+G+ RR L + + L +P + Sbjct: 208 RGLERNEVVKASDVVLERRPKAEVGGDVL-GRDGVIGMQARRSLRAGQPLRGADLGKPDL 266 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 + R V + + ++ G A+ + + GDV+ V N+ + VSG V+ G V + Sbjct: 267 VQRDQGVTLTYETTGIYLTVRGKAMENGAEGDVVNVVNLQSKRTVSGIVIGRGQVSISA 325 >gi|163742545|ref|ZP_02149931.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter gallaeciensis 2.10] gi|161384130|gb|EDQ08513.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter gallaeciensis 2.10] Length = 138 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +VP I A E++ L Q V+G R L + Sbjct: 15 PAWADILVPVRTIRAKEIVTAEDLVLKQAEV----LGAISDPSLVIGQEARVALYAGRPM 70 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + P ++ R V I +G +TI G +L + G+ I V N+ + +SG + Sbjct: 71 RHGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130 Query: 143 DTGTVRV 149 GTV V Sbjct: 131 ADGTVEV 137 >gi|172061976|ref|YP_001809628.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia ambifaria MC40-6] gi|171994493|gb|ACB65412.1| flagella basal body P-ring formation protein FlgA [Burkholderia ambifaria MC40-6] Length = 418 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + VG Sbjct: 282 WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 337 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G I V+ Sbjct: 338 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 397 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 398 -MAAGQIVTAIVKDAGTVEI 416 >gi|163782719|ref|ZP_02177715.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1] gi|159881840|gb|EDP75348.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1] Length = 211 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 58/119 (48%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + GE + ++ ++ S ++++ V R + V+ S L Sbjct: 90 IVAQEDLLKGERVYPWQVAYEEMFMGRCPRQDIESTEELINYVALRTVKRGEVLVKSYLK 149 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + ++ RG +V +I GN+ IS +G AL GDVI V++ +TG ++ G V+ G+V Sbjct: 150 KEPLVRRGQEVSVIYRSGNLEISFSGKALDTGFYGDVIRVRSFNTGKVLRGRVISEGSV 208 >gi|84502380|ref|ZP_01000516.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola batsensis HTCC2597] gi|84389192|gb|EAQ01989.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola batsensis HTCC2597] Length = 222 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 55/129 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A VP + GE + E L +++ + I D+VG+ +R+L Sbjct: 93 AIATLDVPVPVARMLPGERIGEEDLGAVKLPLARIGAFTVTDPADLVGMQVKRLLTQGRP 152 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + +P +I RG ++ I G + +S G AL A G I + N+ + ++G Sbjct: 153 VMTQSVIKPLIIDRGDRISIRYDDGLLALSAPGKALDAAHKGQEIRIVNLASNTSLTGVA 212 Query: 142 VDTGTVRVV 150 V G V V Sbjct: 213 VGRGIVEVT 221 >gi|77918759|ref|YP_356574.1| flagellar basal body P-ring biosynthesis protein [Pelobacter carbinolicus DSM 2380] gi|77544842|gb|ABA88404.1| flagellar basal body P-ring biosynthesis protein [Pelobacter carbinolicus DSM 2380] Length = 240 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G +L L + + + +R + +VG RR + + L P +I Sbjct: 125 LPRGTILQAEDLSMVTMDLAGLRAPCL-DAQQMVGKKLRRPVRMGAPFTQTGLETPPLIK 183 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 RG V I + G +T++T G+A + I VKNI + + V V V + Sbjct: 184 RGDMVTITASVGALTVTTRGLAQESGIADETIRVKNIRSKKEIFCRVTAPSAVEVEL 240 >gi|34497155|ref|NP_901370.1| flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] gi|34103012|gb|AAQ59375.1| probable flagella basal body P-ring formation protein flgA [Chromobacterium violaceum ATCC 12472] Length = 236 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + AG L + + + + GL +R L D + L P + Sbjct: 121 LPAGVALAPQDVAWARRPVGD-PADLFGQASPPQGLASRTPLRQDQPLRRRQLQPPQWVK 179 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RG V I+ Q + +++AG AL++ G+VI V+N + +++ V G V Sbjct: 180 RGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEV 232 >gi|238782788|ref|ZP_04626817.1| Flagellar basal body P-ring biosynthesis protein [Yersinia bercovieri ATCC 43970] gi|238716211|gb|EEQ08194.1| Flagellar basal body P-ring biosynthesis protein [Yersinia bercovieri ATCC 43970] Length = 236 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 PS + G + L+ + + + + + ++GL T R + + + L +P Sbjct: 115 PSHPLKPGVTIQPEDLESRTGSLARLPEGVVFNKEHIIGLTTTRSINRGQPVLQNQLRQP 174 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 VI G +V +I T I + G AL +A++G + + TG +++G+V G V + Sbjct: 175 RVIMTGQEVEMIATGPGFRIRSRGKALDNAALGGTLRII-TKTGQIMTGTVTAEGKVNID 233 Query: 151 VK 152 +K Sbjct: 234 LK 235 >gi|89068732|ref|ZP_01156118.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516] gi|89045695|gb|EAR51757.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516] Length = 218 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 57/129 (44%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A VP I E++ E+ L +++ + ++ +VG+ RRVL Sbjct: 89 ALATVPVPVPVRRILPDEIIAEADLDVVRLPMGRVGAFAVVDLEALVGMQVRRVLSQGRP 148 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P VI RG V I + G + ++ G A++ A G + V N+ + +V+G Sbjct: 149 VMSQSVIEPLVIERGDAVSIRYSDGALELTAPGRAMAGAHRGQDVRVVNLASNRLVTGIA 208 Query: 142 VDTGTVRVV 150 G V V+ Sbjct: 209 ARDGIVEVL 217 >gi|144897833|emb|CAM74697.1| Distal basal body ring component protein [Magnetospirillum gryphiswaldense MSR-1] Length = 317 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 58/126 (46%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + V + +N G+++ E+ +K +++ R + + ++G R+ + D + Sbjct: 183 VAKVPVLARPLNRGDIITEADIKWVELRADVARRDIIIDVDQIIGQEPRQPVRADAPLRA 242 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L RP ++ R A V + L NM++++ A GDVI + N+ + V V Sbjct: 243 SELRRPVLVERNAMVTVTLKTANMSLTSQAKATEAGGKGDVIRITNLQSKRTVEAVVEGP 302 Query: 145 GTVRVV 150 G V V Sbjct: 303 GLVSVT 308 >gi|310764864|gb|ADP09814.1| Flagella basal body P-ring formation protein FlgA [Erwinia sp. Ejp617] Length = 234 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + AG +L ++ + + I +VG T R L I + L + Sbjct: 112 VAKKNLPAGSILRAEDIESHTGSLDHQPAGILFDINQIVGQTTTRALNVGSPIVQNQLRQ 171 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +++ G V II I + G AL++AS+ D++ V+ TG +SG V G V + Sbjct: 172 QWLLHAGQMVDIITQGDGFRIRSQGKALANASVDDMLKVQ-TRTGRTISGKVAHDGQVEI 230 Query: 150 VVK 152 +++ Sbjct: 231 LLQ 233 >gi|238764388|ref|ZP_04625338.1| Flagella basal body P-ring formation protein flgA [Yersinia kristensenii ATCC 33638] gi|238697414|gb|EEP90181.1| Flagella basal body P-ring formation protein flgA [Yersinia kristensenii ATCC 33638] Length = 233 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + + AG + ++ Q + G V+ R + + Sbjct: 106 QVSGQYAVAARQLTAGAKITPQDIEMKQGRLDTLPPGALLEPSFAQGAVSLRQINAGQPL 165 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +V+ G V+++ ++ +G A+++A++ D + V+ + +G +VSG+V Sbjct: 166 TRNMLRRLWVVKAGQYVQVLAQGDGFNVNGSGKAMNNAAVQDNVRVR-MASGQIVSGTVS 224 Query: 143 DTGTVRVVV 151 D G +++++ Sbjct: 225 DDGIIKIIL 233 >gi|292487935|ref|YP_003530810.1| flagella basal body P-ring formation protein FlgA [Erwinia amylovora CFBP1430] gi|292899154|ref|YP_003538523.1| flagella basal body P-ring formation protein [Erwinia amylovora ATCC 49946] gi|291199002|emb|CBJ46113.1| flagella basal body P-ring formation protein [Erwinia amylovora ATCC 49946] gi|291553357|emb|CBA20402.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia amylovora CFBP1430] Length = 222 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + ++ GE ++ S ++ + + D G + R ++P Sbjct: 92 VQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIMPG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + + ++ +P+ + G V + + TI + G A+++A+ + V+ +++G +V+G Sbjct: 152 QPVTMMMMRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210 Query: 140 SVVDTGTVRVVV 151 + G + + + Sbjct: 211 KIDADGNILISL 222 >gi|312172056|emb|CBX80313.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia amylovora ATCC BAA-2158] Length = 222 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + ++ GE ++ S ++ + + D G + R ++P Sbjct: 92 VQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIMPG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + + ++ +P+ + G V + + TI + G A+++A+ + V+ +++G +V+G Sbjct: 152 QPVTMMMIRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIVTG 210 Query: 140 SVVDTGTVRVVV 151 + G + + + Sbjct: 211 KIDADGNILISL 222 >gi|33592475|ref|NP_880119.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella pertussis Tohama I] gi|33572121|emb|CAE41663.1| flagella basal body P-ring formation protein [Bordetella pertussis Tohama I] gi|332381892|gb|AEE66739.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella pertussis CS] Length = 236 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y + S V G V + I G+ + + L + ++G Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + I + L +SRG VRI +S+ G AL +A G + V+ Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPGATVQVR 215 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V G V + + Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236 >gi|33601537|ref|NP_889097.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella bronchiseptica RB50] gi|33575973|emb|CAE33052.1| flagella basal body P-ring formation protein [Bordetella bronchiseptica RB50] Length = 236 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y + S V G V + I G+ + + L + ++G Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + I + L +SRG VRI +S+ G AL +A G + V+ Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPGATVQVR 215 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V G V + + Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236 >gi|238793994|ref|ZP_04637612.1| Flagella basal body P-ring formation protein flgA [Yersinia intermedia ATCC 29909] gi|238726626|gb|EEQ18162.1| Flagella basal body P-ring formation protein flgA [Yersinia intermedia ATCC 29909] Length = 226 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + GE + S ++ Q + G V+ R + + Sbjct: 99 QVSGHYAVAGRQLAVGEKIAASDIQMKQGRLDTLPPGALLEPHFAQGAVSLRRINAGQPL 158 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G +V+++ +++ G A+++A+I D + V+ + +G +VSG+V Sbjct: 159 TRNMLRRLWVIKAGQEVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVG 217 Query: 143 DTGTVRVVV 151 + GT+R+++ Sbjct: 218 EDGTIRIML 226 >gi|332284015|ref|YP_004415926.1| flagella basal body P-ring formation protein [Pusillimonas sp. T7-7] gi|330427968|gb|AEC19302.1| flagella basal body P-ring formation protein [Pusillimonas sp. T7-7] Length = 236 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S+ G+ V + I GEV++ + + + N VG + + + I Sbjct: 109 SIQGYYYVANRNIEVGEVVSLDDMAAREGDILRLANNIIFDPSQAVGYIASQRIRAGGPI 168 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S L P I RG VR + G AL + + G I V+ +G ++SG VV Sbjct: 169 KSSALRDPDSIQRGQMVRTEARGAGFVATGEGQALQNGAPGAQIQVR-ASSGQVISGVVV 227 Query: 143 DTGTVRVVV 151 + TVR+V+ Sbjct: 228 NAHTVRIVM 236 >gi|238758114|ref|ZP_04619294.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae ATCC 35236] gi|238703652|gb|EEP96189.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae ATCC 35236] Length = 226 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + + AGE ++ ++ Q + G V+ R + + Sbjct: 99 QVSGRYAVATRRLAAGEKISMPDIEMKQGRLDTLPPGALLDTHFAQGAVSLRQINAGQPL 158 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G V+I+ I++ G A+++A++ D + V+ + +G +VSG+V Sbjct: 159 TRNMLRRLWVIKAGQDVQILAQGEGFNINSTGKAMNNAAVQDSVRVR-MASGQIVSGTVA 217 Query: 143 DTGTVRVVV 151 D GT+++++ Sbjct: 218 DNGTIQIML 226 >gi|37525837|ref|NP_929181.1| flagella basal body P-ring formation protein FlgA precursor [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785266|emb|CAE14207.1| Flagella basal body P-ring formation protein FlgA precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 219 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SV G+ +V I+ +VL++ + + + + + ++ + R + Sbjct: 86 FIQVAVSVTGNYLVTRRAISRNDVLSDKDFQVRRGLLERLPHDLVINKNEIKNSIAIRNI 145 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 I ++L RP+V+ G V +I+ I G A+++A+I D + V+ I++G + Sbjct: 146 PAGQAITHNMLRRPWVVRSGQSVAVIIQGNGFQIRNEGKAINNAAISDKVRVR-INSGHV 204 Query: 137 VSGSVVDTGTVRVVV 151 ++G ++ G V++++ Sbjct: 205 ITGQALENGNVKIML 219 >gi|310767286|gb|ADP12236.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring [Erwinia sp. Ejp617] Length = 222 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + ++ GEV++ S ++ + + G + R + Sbjct: 92 VQLQVTGSYLVATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADNATGAIALRAITAG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V+G Sbjct: 152 QPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIVNG 210 Query: 140 SVVDTGTVRVVV 151 + G + + + Sbjct: 211 KIDADGNILISL 222 >gi|88704310|ref|ZP_01102024.1| flagella basal body P-ring formation protein FlgA [Congregibacter litoralis KT71] gi|88701361|gb|EAQ98466.1| flagella basal body P-ring formation protein FlgA [Congregibacter litoralis KT71] Length = 252 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LY+ + S + V + G +L L+ + + + G Sbjct: 116 WTLYLRAEVSASLDLP----VLKKALPRGSILGADDLEIVTRRVTAQVADVILEPAAAEG 171 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + +R L + + P ++SRG V +I G + + G A+ + GD + V Sbjct: 172 MELKRPLPAGSTLRHGHVDLPELVSRGQMVTLIAGGGGVEVRMQGKAMGSGAQGDRLLVT 231 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ +G V G ++ G++R+ Sbjct: 232 NLTSGRRVEGLILPDGSIRI 251 >gi|186477693|ref|YP_001859163.1| flagella basal body P-ring formation protein FlgA [Burkholderia phymatum STM815] gi|184194152|gb|ACC72117.1| flagella basal body P-ring formation protein FlgA [Burkholderia phymatum STM815] Length = 424 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LY+ + S+ A+ V + I GE+L+ S L + + VVG Sbjct: 288 WTLYLQAKVSIHAT----YFVAARSIAPGELLSSSDLVARDGDLTVLPQAVITDASQVVG 343 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V + P + +L +S G V+++ IS G A+++AS G + V+ Sbjct: 344 SVALMRVSPGLPLRRDMLKSAEAVSIGQSVKVVAQGPGFAISAEGSAMNNASPGQPVKVR 403 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++ G V D GTV + + Sbjct: 404 -TANGQIIQGVVKDAGTVEIQL 424 >gi|149189832|ref|ZP_01868112.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] gi|148836318|gb|EDL53275.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii AK1] Length = 240 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V S +N + + ++ T + ++ + ++G R + +I S Sbjct: 117 PVAVASQTLNRDTQITAASVQLETRTLNRA-VHFVADLSQIIGNQVSRRMRTGQIIDASF 175 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + +P ++ +G +V II +G ST GIAL G+ I V+N + ++ V Sbjct: 176 VVKPPLVEKGNEVVIIAAKGKFNASTKGIALETGGAGEQIEVQNSQSKKVIRAVVTGLNQ 235 Query: 147 VRV 149 V Sbjct: 236 VHT 238 >gi|300716214|ref|YP_003741017.1| flagellar biosynthesis, assembly of basal-body periplasmic P ring [Erwinia billingiae Eb661] gi|299062050|emb|CAX59166.1| Flagellar biosynthesis, assembly of basal-body periplasmic P ring [Erwinia billingiae Eb661] Length = 222 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + + G L +K + + S ++V V R ++P Sbjct: 92 VQVQVTGDYLVAARQVIRGGTLTADDVKIQRGRLDTLPARTVMSAEEVTDAVALRDIIPG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + ++ +P+ + G V + G +IS+ G A+++A+ ++ V+ + +G +VSG Sbjct: 152 QPLTQMMVRQPWRVKAGQNVTVTANGGGFSISSEGRAMNNATTAQLVRVR-MSSGQIVSG 210 Query: 140 SVVDTGTVRVVV 151 V G + + + Sbjct: 211 KVGADGIILITL 222 >gi|77464903|ref|YP_354407.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|332559801|ref|ZP_08414123.1| FlgA2 [Rhodobacter sphaeroides WS8N] gi|77389321|gb|ABA80506.1| putative flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|332277513|gb|EGJ22828.1| FlgA2 [Rhodobacter sphaeroides WS8N] Length = 139 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VV + + A +L L + +G R L + Sbjct: 13 PASAETVVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPV 68 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + L P +I R V + G + I G ALS +GD I V N+ + VSG + Sbjct: 69 RAADLGPPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIA 128 Query: 143 DTGTVRV 149 + G V V Sbjct: 129 EDGAVHV 135 >gi|254251187|ref|ZP_04944505.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia dolosa AUO158] gi|124893796|gb|EAY67676.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia dolosa AUO158] Length = 370 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L+ + L + + VG Sbjct: 234 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTTLPVAVITDPAQAVG 289 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 290 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGAGFTISAEGSALANAAPGQSVRVR 349 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 350 -MSAGQIVTAIVKDAGTVEI 368 >gi|221199735|ref|ZP_03572778.1| flageller protein FlgA [Burkholderia multivorans CGD2M] gi|221208660|ref|ZP_03581660.1| flageller protein FlgA [Burkholderia multivorans CGD2] gi|221171471|gb|EEE03918.1| flageller protein FlgA [Burkholderia multivorans CGD2] gi|221179974|gb|EEE12378.1| flageller protein FlgA [Burkholderia multivorans CGD2M] Length = 388 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + ++ A+ V + I GE L+ + L + + +G Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386 >gi|209522282|ref|ZP_03270910.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. H160] gi|209497276|gb|EDZ97503.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. H160] Length = 342 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + S+ A+ + + + GEVL + L + + VG Sbjct: 206 WTIYLQARISVHAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 261 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V+ L + +L ++ G VR++ +IS+ G A+++AS G + VK Sbjct: 262 SVSLVRLAGGMPLRRDMLKSAAAVAFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 321 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G +VSG V D GTV + + Sbjct: 322 -TANGQIVSGIVKDGGTVEIQM 342 >gi|114562336|ref|YP_749849.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella frigidimarina NCIMB 400] gi|114333629|gb|ABI71011.1| flagellar basal-body P-ring formation protein FlgA, putative [Shewanella frigidimarina NCIMB 400] Length = 235 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ S+ V + VV + +++ +++ E L+ M V +++G + I Sbjct: 101 WQMYLSVRVEIQYPV--------VVANQLLSPDQIIGEHHLQVMYVDQYSLKGQFFSDIT 152 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 ++G +R + D + + L + +G V I N+ I T G AL D +I +V Sbjct: 153 TLIGSRVKRRVAKDSPVLSNNL---CFVCKGDTVSIYAKTTNVEIKTLGEALRDGNIDEV 209 Query: 126 IAVKNIDTGVMVSG 139 I VKN +T Sbjct: 210 IRVKNSNTSKQFDA 223 >gi|157371211|ref|YP_001479200.1| SAF domain-containing protein [Serratia proteamaculans 568] gi|157322975|gb|ABV42072.1| SAF domain protein [Serratia proteamaculans 568] Length = 217 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G +V + I+AG L + +K + +G V+ R + P + Sbjct: 90 QVTGKYLVSARGISAGSKLTAADIKLKTGRLDTLPPRTLTEAGKALGAVSLRNISPGQPL 149 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L++L R + + G V++ IS +G A+++A+ D + V+ + +G +V+G V Sbjct: 150 NLAMLRRAWAVKAGQAVQVTAQGDGFNISGSGKAMNNAATEDSVRVR-MASGQIVNGIVG 208 Query: 143 DTGTVRVVV 151 D G +R+ + Sbjct: 209 DDGAIRITL 217 >gi|238755328|ref|ZP_04616671.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri ATCC 29473] gi|238706464|gb|EEP98838.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri ATCC 29473] gi|253317691|gb|ACT22780.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia ruckeri] Length = 219 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G +V + + AGE L E + + + + G + R + + Sbjct: 92 QVSGKYLVATRQLAAGEKLTEKEMTYKEGRLDTLPPGALLDARFAKGTLALRHINAGQPL 151 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +V+ G V+++ +++ G A+++A++ D + V+ + +G +VSG+V Sbjct: 152 TRTMLRRSWVVKAGQAVQVVAEGEGFNVNSEGKAMNNAALQDNVRVR-MVSGQIVSGTVG 210 Query: 143 DTGTVRVVV 151 D G +R+++ Sbjct: 211 DDGVIRIML 219 >gi|259907630|ref|YP_002647986.1| Flagella basal body P-ring formation protein FlgA [Erwinia pyrifoliae Ep1/96] gi|224963252|emb|CAX54736.1| Flagella basal body P-ring formation protein FlgA [Erwinia pyrifoliae Ep1/96] gi|283477472|emb|CAY73388.1| Flagella basal body P-ring formation protein flgA precursor [Erwinia pyrifoliae DSM 12163] Length = 234 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + G V+ ++ + + I +VG T R L I + L + Sbjct: 112 VAKKNLPVGSVIRAEDIESHTGSLDHQPAGILFDINQIVGQTTTRALNVGSPIVQNQLRQ 171 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +++ G V II I + G AL++AS+ D++ V+ TG +SG V G V + Sbjct: 172 QWLLHAGQMVDIITQGDGFRIRSQGKALANASVDDMLKVQ-TRTGRTISGKVAHDGQVEI 230 Query: 150 VVK 152 +++ Sbjct: 231 LLQ 233 >gi|189426329|ref|YP_001953506.1| flagella basal body P-ring formation protein FlgA [Geobacter lovleyi SZ] gi|189422588|gb|ACD96986.1| flagella basal body P-ring formation protein FlgA [Geobacter lovleyi SZ] Length = 243 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 54/121 (44%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V S + AG VL E+ L+ + + G +I D VG R + I + L Sbjct: 121 VTASRQLLAGTVLTEADLQLQKQDLAQAGGLPVKNITDAVGKKLRITVRAGTPIRSNQLV 180 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 V+ G V II + I+ +G A S +G++I V+N+ + + VVD TV Sbjct: 181 SVPVVVSGQLVTIIAENAGVRITVSGRARSAGGVGELIRVQNLVSNKEIPARVVDASTVE 240 Query: 149 V 149 V Sbjct: 241 V 241 >gi|161526190|ref|YP_001581202.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia multivorans ATCC 17616] gi|189349094|ref|YP_001944722.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia multivorans ATCC 17616] gi|160343619|gb|ABX16705.1| flagella basal body P-ring formation protein FlgA [Burkholderia multivorans ATCC 17616] gi|189333116|dbj|BAG42186.1| flagella basal body P-ring formation protein [Burkholderia multivorans ATCC 17616] Length = 388 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + ++ A+ V + I GE L+ + L + + +G Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386 >gi|119947160|ref|YP_944840.1| flagellar basal body P-ring biosynthesis protein-like protein [Psychromonas ingrahamii 37] gi|119865764|gb|ABM05241.1| Flagellar basal body P-ring biosynthesis protein-like protein [Psychromonas ingrahamii 37] Length = 234 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S+ +++ + + +V A + G L + + N +Y ++ + G Sbjct: 98 WSVNIVANINYYMAVATTA----SSLPRGHSLQPEDIVFREQRIRN--NDYYPNVAGLAG 151 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T+R L +I + Y + R ++V II Q + ++ST GIAL +GD+I VK Sbjct: 152 KKTKRKLRAGSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVK 211 Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152 N +G +++ +V+ V V K Sbjct: 212 NKRSGNIITTTVIGKNKVSVESK 234 >gi|221215567|ref|ZP_03588530.1| flageller protein FlgA [Burkholderia multivorans CGD1] gi|221164555|gb|EED97038.1| flageller protein FlgA [Burkholderia multivorans CGD1] Length = 388 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + ++ A+ V + I GE L+ + L + + +G Sbjct: 252 WTVYLQAKVTVHAT----YYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386 >gi|295678062|ref|YP_003606586.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1002] gi|295437905|gb|ADG17075.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1002] Length = 493 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + + + GEVL + L + + + VG Sbjct: 357 WTIYLQARISLHAT----YYLAARAMAPGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 412 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V+ + + +L + G VR++ +IS+ G A+++AS G + VK Sbjct: 413 SVSLVRISGGMPLRRDMLKSASAVVFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 472 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D GTV + + Sbjct: 473 -TANGQIISGIVKDGGTVEIQM 493 >gi|260886212|ref|ZP_05897475.1| putative flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|330839792|ref|YP_004414372.1| flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|260863931|gb|EEX78431.1| putative flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] gi|329747556|gb|AEC00913.1| flagella basal body P-ring formation protein FlgA [Selenomonas sputigena ATCC 35185] Length = 244 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 61/126 (48%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V +V S + + L+E+ ++ + + +RG +V+G V R++ V+ Sbjct: 117 VYDTVLVASRNLFPEQALSEADMRFEEREVTRVRGRCLKDKGEVLGHVVSRMVQEGAVLS 176 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 +L +P V+ GA V I+ + + +G+AL+ +G I V+N + ++ V+D Sbjct: 177 EDLLRQPVVMESGAAVTIVSRYNGIEVRVSGVALTRGRVGQKIRVRNAASRKVMLARVLD 236 Query: 144 TGTVRV 149 TV + Sbjct: 237 ASTVEI 242 >gi|293604999|ref|ZP_06687395.1| flagella basal body P-ring formation protein FlgA [Achromobacter piechaudii ATCC 43553] gi|292816604|gb|EFF75689.1| flagella basal body P-ring formation protein FlgA [Achromobacter piechaudii ATCC 43553] Length = 238 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++ YV + S V G+ V S +I+AG+ L L ++ + VVG Sbjct: 102 WTTYVQATVS----VPGYYYVASRMISAGQALTPDDLAPRDGDLVSLPPGAITDPQAVVG 157 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + S L + RGA VRI +S+ G AL +A+ G V+ V+ Sbjct: 158 MSAAFRINAGQPVRSSSLRNAQSVMRGANVRINARGNGFVVSSEGQALDNAAPGAVVQVR 217 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V + G V + + Sbjct: 218 -TASGQVVSGVVRNAGLVEIQL 238 >gi|218507130|ref|ZP_03505008.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli Brasil 5] Length = 109 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 43/109 (39%), Positives = 72/109 (66%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 ++ + + + + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V Sbjct: 1 MIAVAGIVVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVE 60 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 GLV++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L Sbjct: 61 GLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPL 109 >gi|254524107|ref|ZP_05136162.1| flagellar protein [Stenotrophomonas sp. SKA14] gi|219721698|gb|EED40223.1| flagellar protein [Stenotrophomonas sp. SKA14] Length = 218 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 58/134 (43%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + +V + I GE + + + Q + I G +G + RR L Sbjct: 84 FVPVKVRRNQSVLVLNRGIGTGETITAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ + + Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203 Query: 137 VSGSVVDTGTVRVV 150 V G+V G V V Sbjct: 204 VQGTVDAAGDVIVA 217 >gi|90408053|ref|ZP_01216224.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp. CNPT3] gi|90310810|gb|EAS38924.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp. CNPT3] Length = 230 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S YV + + + ++ + + GE LN + +K +T S +RG K ++G Sbjct: 96 WSTYV----RVRSHRLFRTIISAQALRKGETLNNNNIKVTYLTKSQLRGGSFSQKKILIG 151 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R + +I + + + +V I + + I T+GIAL++A+IG+ + VK Sbjct: 152 SRLKRNMGAQKIIKNRDV---CFVCQKDQVIISAIKAGLVIKTSGIALNNANIGESVRVK 208 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 N + +V G+V V+V Sbjct: 209 NSRSQRIVVGTVSAQKEVQVT 229 >gi|188534174|ref|YP_001907971.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring [Erwinia tasmaniensis Et1/99] gi|188029216|emb|CAO97088.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring [Erwinia tasmaniensis Et1/99] Length = 222 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G VV + I+ GE ++ S ++ Q + + +G VT R + P Sbjct: 92 VQVQVTGSYVVATRQISQGEAISASDVRMEQGRLDTLPARTLMQPGEAIGAVTLRDITPG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L ++ + + + G V + + +IS+ G A+++A+ + V+ +++G +V G Sbjct: 152 QPMTLMMMRQAWRVKAGQTVIVYASGDGFSISSEGKAMNNAAALQSVRVR-MNSGQIVMG 210 Query: 140 SVVDTGTVRVVV 151 V G V + + Sbjct: 211 QVGSDGNVLISL 222 >gi|92114102|ref|YP_574030.1| flageller protein FlgA [Chromohalobacter salexigens DSM 3043] gi|91797192|gb|ABE59331.1| flagellar protein FlgA [Chromohalobacter salexigens DSM 3043] Length = 251 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 1/125 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V + I G+ L+ L + S N +G V + L+ + Sbjct: 128 RFLVAATAIQRGQRLSADMLGWERADVSRRPRNALDDPSQAIGKVVMQRLVKGMALRGDR 187 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L +PY++ RG V +I +++ G AL++ GD I + D G ++ G V G Sbjct: 188 LRQPYLVHRGEAVTLIARGDGFSVTREGEALNNGGKGDAIRARMPD-GQVIRGEVDAQGR 246 Query: 147 VRVVV 151 + V Sbjct: 247 LTVRY 251 >gi|307131613|ref|YP_003883629.1| flagellar basal-body P-ring formation protein flgA [Dickeya dadantii 3937] gi|306529142|gb|ADM99072.1| Flagellar basal-body P-ring formation protein flgA [Dickeya dadantii 3937] Length = 228 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + V G+ VV + I G L ++ ++ + + ++ G V R + Sbjct: 95 FVQVEVQVTGNYVVAAAPIGRGAELTSGDIRTIRGRIDQLPPRALFTPEEAQGAVALRDI 154 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 P + ++ +P+VI G V+I+ ++ + G A+++A+ G + +G + Sbjct: 155 APGQALTQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQSARAR-TASGQV 213 Query: 137 VSGSVVDTGTVRV 149 VSG D G + + Sbjct: 214 VSGIATDDGIILI 226 >gi|302343758|ref|YP_003808287.1| flagella basal body P-ring formation protein FlgA [Desulfarculus baarsii DSM 2075] gi|301640371|gb|ADK85693.1| flagella basal body P-ring formation protein FlgA [Desulfarculus baarsii DSM 2075] Length = 321 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V V S + +++ ++ ++ + + V+G+ TR + + Sbjct: 193 DVYAPVAVASRSLARRQIIGPDDVELARINLAEAPRDVVTEPDQVIGMRTRGAVGMGQPL 252 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + + +I RG V I+ M IST G A G VI + N+ T V+G V Sbjct: 253 DMRWVEPAPLIQRGEIVNILAKAPGMRISTKGRAEETGFRGKVIRLTNLATKRTVNGRVN 312 Query: 143 DTGTVRV 149 G V V Sbjct: 313 APGEVIV 319 >gi|91976160|ref|YP_568819.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris BisB5] gi|91682616|gb|ABE38918.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB5] Length = 366 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + EV+ S + + + + + V+G+ RR L ++ + L Sbjct: 208 VVLTRPVERNEVIKISDVAIERRPKAEVASDAIAR-DAVIGMQARRALRSGQIVRSTDLA 266 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +P +++R V +I + +++ G AL + GDV+ V N+ + VS +VV G V Sbjct: 267 KPDLVTRDQGVTLIYQAAGIYLTSRGKALETGTEGDVVNVLNLQSKRTVSATVVGRGQVM 326 Query: 149 VVV 151 V V Sbjct: 327 VTV 329 >gi|2494515|sp|Q56892|FLGA_YEREN RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|793897|emb|CAA88191.1| flgA [Yersinia enterocolitica] Length = 224 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + AGE + +K Q + G V+ R + + Sbjct: 97 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 156 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG+V Sbjct: 157 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 215 Query: 143 DTGTVRVVV 151 D GTV +++ Sbjct: 216 DDGTVHILL 224 >gi|332161318|ref|YP_004297895.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665548|gb|ADZ42192.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 226 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + AGE + +K Q + G V+ R + + Sbjct: 99 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 158 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG+V Sbjct: 159 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 217 Query: 143 DTGTVRVVV 151 D GTV +++ Sbjct: 218 DDGTVHILL 226 >gi|317406205|gb|EFV86454.1| flagella basal body P-ring formation protein [Achromobacter xylosoxidans C54] Length = 249 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 ++ YV + S V GH V S +I AG+ L + L + + + VV Sbjct: 112 AWTTYVQATVS----VPGHYYVASRMIAAGQALTPADLAPRDGDLVALPPGVITNPQTVV 167 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G+ + + + L + RG+ VRI +S+ G AL +A+ G + V Sbjct: 168 GMTAAYRINAGQPVKGAALRNAQSVVRGSNVRINARGKGFVVSSEGQALDNAAPGATVQV 227 Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151 + +G +VSG V + G V + + Sbjct: 228 R-TASGQVVSGVVRNAGLVEIQL 249 >gi|190574268|ref|YP_001972113.1| flagellar basal body P-ring biosynthesis protein FlgA [Stenotrophomonas maltophilia K279a] gi|190012190|emb|CAQ45813.1| putative flagella basal body P-ring formation protein [Stenotrophomonas maltophilia K279a] Length = 218 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 58/134 (43%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + +V + I GE L + + Q + I G +G + RR L Sbjct: 84 FVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ + + Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203 Query: 137 VSGSVVDTGTVRVV 150 V G+V G V V Sbjct: 204 VQGTVDAAGDVIVA 217 >gi|114765243|ref|ZP_01444375.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca bermudensis HTCC2601] gi|114542378|gb|EAU45406.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. HTCC2601] Length = 220 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 58/121 (47%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP+ + GE+++ + +K + + + + + + G+ RR+L + + Sbjct: 99 VPTRRLMPGEIVSAADIKIVDLPIARVGVFTLTDAEMLEGMQVRRMLAQGRPVMRQSVME 158 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P VI RG KV I+ G + ++ G AL+DA G + + N+ + ++ + G V V Sbjct: 159 PLVIGRGDKVNILYDDGRLVVTAPGRALTDAHRGQDVRIVNLVSNNALTAVAREEGLVEV 218 Query: 150 V 150 + Sbjct: 219 I 219 >gi|183598613|ref|ZP_02960106.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827] gi|188020792|gb|EDU58832.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827] Length = 218 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V G V + I GE + + + + A + G + R + Sbjct: 84 FIQLTVNVTGQYYVATRNIARGEKIEFVDIGTQKGLLHKLPTGAATDKVAIRGSIALRDI 143 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + S++ RP+ + G V + N ++ G A+++A+ G+ V+ + G + Sbjct: 144 NAGQTLTQSMMRRPWAVKAGQNVYVFANGHNFSVKYEGRAINNAATGENTRVR-LINGQV 202 Query: 137 VSGSVVDTGTVRVVVK 152 V+G ++ G+VRV +K Sbjct: 203 VNGEALENGSVRVALK 218 >gi|238799103|ref|ZP_04642559.1| Flagella basal body P-ring formation protein flgA [Yersinia mollaretii ATCC 43969] gi|238717050|gb|EEQ08910.1| Flagella basal body P-ring formation protein flgA [Yersinia mollaretii ATCC 43969] Length = 234 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V S + AG + ++ Q + + G V+ R + + Sbjct: 107 QVSGRYAVASRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPQFAQGSVSLRQINAGQPL 166 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG V Sbjct: 167 TRNMLRRLWIIKSGQDVQVLAQGDGFNVNSNGKAMNNAAIQDSVRVR-MPSGQIVSGVVA 225 Query: 143 DTGTVRVVV 151 D GT+R+++ Sbjct: 226 DDGTIRIML 234 >gi|86750897|ref|YP_487393.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris HaA2] gi|86573925|gb|ABD08482.1| Flageller protein FlgA [Rhodopseudomonas palustris HaA2] Length = 358 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A V + I EV+ S + + + + + +G+ RR L ++ + Sbjct: 205 PATVLTRSIERNEVIKASDVAIERRPKAEAASDIVVR-EVAIGMQARRTLRSGQLVRSAD 263 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L +P +++R V +I + +++ G AL + GDVI V N+ + V+ +V+ G Sbjct: 264 LAKPDLVTRDQGVTLIYQAAGIYLTSRGKALETGTEGDVINVLNLHSKRTVAATVIGRGQ 323 Query: 147 VRV 149 V V Sbjct: 324 VMV 326 >gi|300722686|ref|YP_003711976.1| flagellar basal-body periplasmic P ring assembly protein [Xenorhabdus nematophila ATCC 19061] gi|297629193|emb|CBJ89789.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring [Xenorhabdus nematophila ATCC 19061] Length = 223 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 1/135 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + +VIG +V I+ VL E + + + + + K + + R + Sbjct: 90 FIQAYVNVIGPYLVSKRTIHRSAVLTEKDFQIKTGSLDKLPNDIIRNRKAIQNGIAIRNI 149 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 I +++ RP+ I G V + + + + G A+++A+ D I V+ +++G + Sbjct: 150 PAGQSITRNMIRRPWAIKAGQNVVVTVDGHHFQVRYEGKAINNAASFDNIRVR-LNSGQV 208 Query: 137 VSGSVVDTGTVRVVV 151 ++G + G+V++++ Sbjct: 209 ITGEAQENGSVKMML 223 >gi|77968586|gb|ABB09966.1| Flagellar protein FlgA [Burkholderia sp. 383] Length = 421 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + + V V + I GE L+ + L + + +G Sbjct: 285 WTVYLQAKVT----VQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 340 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 341 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 400 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 401 -MAAGQIVTAIVKDAGTVEI 419 >gi|332305609|ref|YP_004433460.1| flagella basal body P-ring formation protein FlgA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172938|gb|AEE22192.1| flagella basal body P-ring formation protein FlgA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 236 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV S ++ G +LN+S +K + + + +R ++ DV+G +R + P I Sbjct: 113 MQPVVVISNAVSPGTILNQSNIKLVDMNRALLRRTTFSTLDDVLGARIKRRVRPGQPITP 172 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + L + +G + I + M + G+A+ D +IGD I+V N + ++ V T Sbjct: 173 NNL---CFVCKGDTIVINASNPMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAST 229 Query: 145 GTVRV 149 V V Sbjct: 230 SEVVV 234 >gi|161702954|ref|YP_370610.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia sp. 383] Length = 320 Score = 97.6 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + + V V + I GE L+ + L + + +G Sbjct: 184 WTVYLQAKVT----VQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 239 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 240 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 299 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 300 -MAAGQIVTAIVKDAGTVEI 318 >gi|170742324|ref|YP_001770979.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] gi|168196598|gb|ACA18545.1| flagella basal body P-ring formation protein FlgA [Methylobacterium sp. 4-46] Length = 347 Score = 97.6 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 53/125 (42%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + V + + GE + + + + +VG V +R L P + Sbjct: 206 MVEVAVLARPLARGETVGPQDVTLERRPRDAAPPDGVADAASLVGQVAQRALAPGQPLRS 265 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + L RP ++ RG V I+ ++++ G+A +G ++V N + ++ G+VV Sbjct: 266 ADLARPDLVQRGEAVTILYEGPGVSLALGGLAREGGPLGATVSVVNPVSKKVLQGTVVGP 325 Query: 145 GTVRV 149 G V V Sbjct: 326 GRVSV 330 >gi|318605238|emb|CBY26736.1| flagellar basal-body P-ring formation protein FlgA [Yersinia enterocolitica subsp. palearctica Y11] Length = 226 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + AGE + +K Q + G V+ R + + Sbjct: 99 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 158 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +V+G+V Sbjct: 159 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVNGTVA 217 Query: 143 DTGTVRVVV 151 D GTV +++ Sbjct: 218 DDGTVHILL 226 >gi|307731367|ref|YP_003908591.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1003] gi|307585902|gb|ADN59300.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1003] Length = 543 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + + ++AGEVL + L + + + VG Sbjct: 407 WTIYLQARISLHAT----YYLAARAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 462 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +T + P + +L +S G V+++ IS+ G A+++AS G + VK Sbjct: 463 SLTLTRVSPGMPLRRDMLRSASAVSIGQTVKVVAAGDGFAISSEGSAMNNASPGQQVRVK 522 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 523 -TANGQIISGIVKDGSTVEIQL 543 >gi|109899408|ref|YP_662663.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudoalteromonas atlantica T6c] gi|109701689|gb|ABG41609.1| flagella basal body P ring formation protein FlgA [Pseudoalteromonas atlantica T6c] Length = 236 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV S ++ G +LN+S ++ + + + +R ++ DV+G +R + P I Sbjct: 113 MQPVVVISNAVSPGTILNQSNIELINMNRALLRRTTFSNVDDVMGARIKRRVRPGQPITP 172 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + L + +G + I + M + G+A+ D +IGD I+V N + ++ V T Sbjct: 173 NNL---CFVCKGDTIIINASNSMMQVKATGVAMQDGNIGDTISVTNSRSKKQINARVAST 229 Query: 145 GTVRV 149 V V Sbjct: 230 SEVVV 234 >gi|115283110|gb|ABI88627.1| flagellar protein FlgA [Burkholderia ambifaria AMMD] Length = 436 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + VG Sbjct: 300 WTVYLQAKV----AVQATYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 355 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G I V+ Sbjct: 356 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 415 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 416 -MAAGQIVTAIVKDAGTVEI 434 >gi|332140540|ref|YP_004426278.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas macleodii str. 'Deep ecotype'] gi|327550562|gb|AEA97280.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas macleodii str. 'Deep ecotype'] Length = 238 Score = 96.8 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 3/119 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV ++ G VL S L +V +R ++ ++G +R + I ++L Sbjct: 119 VVTQGAVSPGTVLTSSNLTLAKVDVRRLRHTAFTDLEALIGARMKRRVTNGQAIQSNML- 177 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +G ++ I M + TAGIA D +GD I V N + V V V Sbjct: 178 --CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVLNASSRKAVIARVASPEEV 234 >gi|260768766|ref|ZP_05877700.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] gi|260616796|gb|EEX41981.1| flagellar basal-body P-ring formation protein FlgA [Vibrio furnissii CIP 102972] Length = 233 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%) Query: 10 FSLYVLSLDSLFASVIG----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + + + + A+ + A+ + + G L + +VT S+ + + Sbjct: 90 WWVSCPTQWKIKATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYRERE 148 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 V+G RR + H+I + L + YV+ +G V + T+ T A S+ IGD Sbjct: 149 QVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAESNGLIGDT 208 Query: 126 IAVKNIDTGVMVSGSVVDTGTVR 148 I V++ D+G ++S VV G V Sbjct: 209 IWVRSRDSGRLLSVKVVGDGEVE 231 >gi|239995132|ref|ZP_04715656.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas macleodii ATCC 27126] Length = 238 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 3/119 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV I+ G VL S L +V +R ++ ++G +R + I ++L Sbjct: 119 VVTQGAISPGTVLTSSNLSLAKVDVRRLRHTAFTELEALIGARIKRRVTDGQAIQSNML- 177 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +G ++ I M + TAGIA D +GD I V N + V V V Sbjct: 178 --CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVINASSQKAVIARVASPEEV 234 >gi|194365685|ref|YP_002028295.1| flagellar basal body P-ring biosynthesis protein FlgA [Stenotrophomonas maltophilia R551-3] gi|194348489|gb|ACF51612.1| flagella basal body P-ring formation protein FlgA [Stenotrophomonas maltophilia R551-3] Length = 218 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 58/134 (43%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + +V + I GE L + + Q + I G +G + RR L Sbjct: 84 FVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPL 143 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ + + Sbjct: 144 QAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRI 203 Query: 137 VSGSVVDTGTVRVV 150 V G+V G V V Sbjct: 204 VQGTVDAAGDVIVA 217 >gi|123442788|ref|YP_001006765.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089749|emb|CAL12602.1| flagella basal body P-ring formation protein FlgA [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 200 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + AG + ++ Q + G V+ R + + Sbjct: 73 QVSGHYAVAARQLAAGAKMTLQDIEMKQGRLDTLPPGALLEPNFAQGAVSLRPINAGQPL 132 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG+V Sbjct: 133 TRNMLRRLWIIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 191 Query: 143 DTGTVRVVV 151 D GTV +++ Sbjct: 192 DDGTVHILL 200 >gi|261821149|ref|YP_003259255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pectobacterium wasabiae WPP163] gi|261605162|gb|ACX87648.1| flagella basal body P-ring formation protein FlgA [Pectobacterium wasabiae WPP163] Length = 222 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V S IN G L E+ + + + +++ G V R L P VI Sbjct: 95 QVTGNYVTSSRPINRGTTLTENDIGLTKGRLDLLPLRPILTLQGAQGAVLLRDLTPGQVI 154 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S++ R +V+ G V+II TI+ G A+++A+ G + V+ G ++SG Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIISGITN 213 Query: 143 DTGTVRV 149 + G + + Sbjct: 214 EDGIILI 220 >gi|253688976|ref|YP_003018166.1| flagella basal body P-ring formation protein FlgA [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755554|gb|ACT13630.1| flagella basal body P-ring formation protein FlgA [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 222 Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V S IN G L E + + + +++ G V R L P VI Sbjct: 95 QVTGNYVTSSRPINRGTTLTEKDMSLTKGRLDLLPLRPILTLQGAQGAVLLRDLTPGQVI 154 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S++ R +V+ G V+II TI+ G A+++A++G + V+ G ++SG Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAVGQAVRVR-TANGQIISGITN 213 Query: 143 DTGTVRV 149 G + + Sbjct: 214 KDGIILI 220 >gi|162389965|ref|YP_774961.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia ambifaria AMMD] Length = 315 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + VG Sbjct: 179 WTVYLQAKV----AVQATYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 234 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G I V+ Sbjct: 235 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 294 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 295 -MAAGQIVTAIVKDAGTVEI 313 >gi|242238965|ref|YP_002987146.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech703] gi|242131022|gb|ACS85324.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech703] Length = 234 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 1/128 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VI VV + I + + + + + + +G VT R+L I Sbjct: 107 QVIAPYVVAAKTIPTRHQIQADDIAVTRGRIDLLTTAPITTPAEAIGNVTTRMLGAGQAI 166 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L + I G V+++++ +I++ G AL +A++ D + V+ +D+G ++SG Sbjct: 167 SAKMLRSAWAIKMGEPVQVVVSGTGFSINSEGKALENAAVNDKVRVR-MDSGQIISGIAA 225 Query: 143 DTGTVRVV 150 + G VR++ Sbjct: 226 EKGLVRII 233 >gi|253990131|ref|YP_003041487.1| flagella basal body p-ring formation protein flga [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639032|emb|CAR67646.1| flagella basal body p-ring formation protein flga [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781581|emb|CAQ84744.1| flagella basal body p-ring formation protein flga [Photorhabdus asymbiotica] Length = 219 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 68/135 (50%), Gaps = 1/135 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SV G+ +V ++ +VL+E ++ + + + ++ V R + Sbjct: 86 FIQVAVSVTGNYLVTRRALSRNDVLSEKDVQVRSGLLEKLPHDLIFNKNEIKNGVAVRNI 145 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 V+ ++L RP+ + G V +I+ I G A+++A+ D + V+ +++G++ Sbjct: 146 PAGQVLTRTMLRRPWAVRSGQNVVVIVQGDGFQIRNEGKAINNAATSDKVRVR-MNSGLV 204 Query: 137 VSGSVVDTGTVRVVV 151 ++G ++ G+V++++ Sbjct: 205 ITGQALENGSVKIML 219 >gi|167585189|ref|ZP_02377577.1| flagella basal body P-ring formation protein FlgA [Burkholderia ubonensis Bu] Length = 184 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + + V + I GEVL + L + + VG Sbjct: 48 WTVYLQAKVT----VQATYYAAARQIAPGEVLTAADLVARDGDLTLLPLAVITDPSQAVG 103 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 104 STALARVAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 163 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 164 -MAAGQIVTAIVKDAGTVEI 182 >gi|327393467|dbj|BAK10889.1| flagella basal body P-ring formation protein FlgA precursor [Pantoea ananatis AJ13355] Length = 219 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + +I G + + + N+ + + V V R + P Sbjct: 89 VQVQVTGDYLVATKLIARGSTVTKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + S+L +P+ + G V ++ + S G AL++ +I + V+ + G +VSG Sbjct: 149 QPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVVSG 207 Query: 140 SVVDTGTVRVVV 151 V D G + + + Sbjct: 208 RVSDDGKILITL 219 >gi|315180469|gb|ADT87383.1| flagellar basal body P-ring biosynthesis protein flgA [Vibrio furnissii NCTC 11218] Length = 233 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%) Query: 10 FSLYVLSLDSLFASVIG----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + + + + A+ + A+ + + G L + +VT S+ + + Sbjct: 90 WWVSCPTQWKIKATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYRERE 148 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 V+G RR + H+I + L + YV+ +G V + T+ T A ++ IGD Sbjct: 149 QVIGSKLRRPIRASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAENNGLIGDT 208 Query: 126 IAVKNIDTGVMVSGSVVDTGTVR 148 I V++ D+G ++S VV G V Sbjct: 209 IWVRSRDSGRLLSVKVVGDGEVE 231 >gi|254488219|ref|ZP_05101424.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp. GAI101] gi|214045088|gb|EEB85726.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp. GAI101] Length = 123 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 4/125 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VVP+ + A ++ E + V+ + ++DV+G R VL I L Sbjct: 1 MAQVVVPTRTVRADAIITEMDVMIGNVS----AADGFDRLRDVIGQEARVVLYAGRPIML 56 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + P ++ R V + + I+T G AL +GD I V N+ + + G V Sbjct: 57 DQIGPPAIVDRNQIVSLFFEGRGLRIATEGRALERGGVGDNIRVMNLASRATLFGQVQQD 116 Query: 145 GTVRV 149 GT+++ Sbjct: 117 GTIQI 121 >gi|161610400|ref|NP_883779.2| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella parapertussis 12822] Length = 236 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y + S V G V + I G+ + + L + ++G Sbjct: 100 WTVYAQATVS----VPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILG 155 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + I + L +SRG VRI +S+ G AL +A + V+ Sbjct: 156 MRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPSATVQVR 215 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V G V + + Sbjct: 216 -TASGQVVSGIVQAAGLVEIQL 236 >gi|291617016|ref|YP_003519758.1| FlgA [Pantoea ananatis LMG 20103] gi|291152046|gb|ADD76630.1| FlgA [Pantoea ananatis LMG 20103] Length = 219 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + +I G +++ + N+ + + V V R + P Sbjct: 89 VQVQVTGDYLVATKLIARGSTVSKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + S+L +P+ + G V ++ + S G AL++ +I + V+ + G +VSG Sbjct: 149 QPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVVSG 207 Query: 140 SVVDTGTVRVVV 151 V D G + + + Sbjct: 208 RVSDDGKILITL 219 >gi|224826244|ref|ZP_03699346.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] gi|224601345|gb|EEG07526.1| flagella basal body P-ring formation protein FlgA [Lutiella nitroferrum 2002] Length = 228 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SL + + VV + + AGE+L ++ ++T+ + N + + +G Sbjct: 92 WSLRLPVTIAEK----RMGVVATRPLKAGELLAPDDVRLAEMTSPALSRNVLNRLDQAIG 147 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + +L +P VI +V+++ + G A +A+ G+ + V+ Sbjct: 148 QSMRSSVPAGAWLRSFMLQQPDVIRTNQRVKVLAQGDGFVATAEGTARGNAAAGESVRVR 207 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + +G VSG G+V V Sbjct: 208 -MASGREVSGVAQADGSVLV 226 >gi|317050616|ref|YP_004111732.1| flagella basal body P-ring formation protein FlgA [Desulfurispirillum indicum S5] gi|316945700|gb|ADU65176.1| flagella basal body P-ring formation protein FlgA [Desulfurispirillum indicum S5] Length = 249 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV-GLVTRRVLLPDHVIP 83 + A VP I GEVL E + + R D +V+ R L ++ Sbjct: 122 MVEAYVPVRNITRGEVLREGDFRRQLFPATQARNAMDIGETDFASHIVSTRNLQEGQIVR 181 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + L R Y + RG V +I +T+S A +A A +GDV+ +KN +G +++ ++ Sbjct: 182 TTDLRREYAVQRGDIVEVIYRHDRLTLSMAAVATERAYLGDVVRLKNPSSGRILTARLLQ 241 Query: 144 TGTVRVVV 151 ++ Sbjct: 242 GKKAEIIY 249 >gi|296102912|ref|YP_003613058.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057371|gb|ADF62109.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 218 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV +V I G +L+ S + + + I V+ R + P Sbjct: 88 VAVQATGNYVVAAVPIARGSMLHASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVAPG 147 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + + G +V ++ I++ G AL++A++ V+ + +G +VSG Sbjct: 148 QPIQLSMLRQAWRVKAGQQVMVVANGDGFQINSEGKALNNAAVAQNARVR-MSSGQVVSG 206 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 207 TVDSDGNILI 216 >gi|257140552|ref|ZP_05588814.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia thailandensis E264] gi|284159417|ref|YP_440797.3| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia thailandensis E264] gi|83652486|gb|ABC36549.1| FlgA family protein [Burkholderia thailandensis E264] Length = 538 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 402 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 457 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIST G L++A+ G + V+ Sbjct: 458 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 517 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 518 -MAAGQIVTAIVKDAATVEI 536 >gi|126463745|ref|YP_001044859.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides ATCC 17029] gi|126105409|gb|ABN78087.1| SAF domain [Rhodobacter sphaeroides ATCC 17029] Length = 139 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + A +L L + +G R L + + L Sbjct: 19 VVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPVRAADLG 74 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P +I R V + G + I G ALS +GD I V N+ + VSG + + G V Sbjct: 75 PPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGAVH 134 Query: 149 V 149 V Sbjct: 135 V 135 >gi|50120635|ref|YP_049802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pectobacterium atrosepticum SCRI1043] gi|49611161|emb|CAG74607.1| flagella basal body P-ring formation protein [Pectobacterium atrosepticum SCRI1043] Length = 222 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V+ S IN G L E + + + +++ G V R L P VI Sbjct: 95 QVTGNYVISSRPINRGTALTEKDISLTKGRLDLLPLRPILTLQGAQGAVILRDLTPGQVI 154 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S++ R +++ G V+II TI+ G A+++A+ G + V+ G ++SG Sbjct: 155 TTSMIRRAWIVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIISGITN 213 Query: 143 DTGTVRV 149 + G + + Sbjct: 214 EDGIILI 220 >gi|227112517|ref|ZP_03826173.1| flagellar basal body P-ring biosynthesis protein FlgA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 222 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V + +IN G L E ++ + + ++ G V R L P VI Sbjct: 95 QVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDLTPGQVI 154 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S++ R +V+ G V+II TI+ G A+++A+ G + V+ G +VSG Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIVSGITN 213 Query: 143 DTGTVRV 149 + G + + Sbjct: 214 EDGIILI 220 >gi|251789164|ref|YP_003003885.1| flagellar basal body P-ring biosynthesis protein FlgA [Dickeya zeae Ech1591] gi|247537785|gb|ACT06406.1| flagella basal body P-ring formation protein FlgA [Dickeya zeae Ech1591] Length = 222 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + V G VV + ++ G L ++ ++ + + ++ G + R + Sbjct: 89 FIQVEVQVTGSYVVAAAPVSRGSELAAGDIRTVRGRIDQLPPRALFTPEEAQGAIALRDI 148 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 P I ++ +P+VI G V+I+ ++ + G A+++A+ G + +G + Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGEGFSVRSEGKAMNNAASGQPARAR-TASGQV 207 Query: 137 VSGSVVDTGTVRV 149 VSG G + + Sbjct: 208 VSGIASGDGIILI 220 >gi|271500062|ref|YP_003333087.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech586] gi|270343617|gb|ACZ76382.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii Ech586] Length = 222 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + V G+ V + I+ G L ++ ++ + + + +DV G V R + Sbjct: 89 FVQVEVQVTGNYVAAAAPISRGTELASGDIRMVRGRIDQLPPHALFTQEDVQGAVALRDI 148 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 P I ++ +P+VI G V+I+ ++ + G A+++A+ G + +G + Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQQARAR-TASGQV 207 Query: 137 VSGSVVDTGTVRV 149 VSG G + + Sbjct: 208 VSGIASGDGIILI 220 >gi|299131786|ref|ZP_07024981.1| flagella basal body P-ring formation protein FlgA [Afipia sp. 1NLS2] gi|298591923|gb|EFI52123.1| flagella basal body P-ring formation protein FlgA [Afipia sp. 1NLS2] Length = 343 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + +++ S + + S + + S+ +G+ RR + + L Sbjct: 199 AAVLMRPMERNDIIKASDVSIERRPKSEVGSDGV-SLDRAIGMQMRRAMRAGQALRTLDL 257 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +++R + +I + ++ G AL + GD + V N+ + V G VV G V Sbjct: 258 AKADLVTRDQGITLIYEAPGIYLTGRGKALEAGTKGDTVNVLNLQSKRTVQGIVVGPGQV 317 Query: 148 RVVV 151 ++ Sbjct: 318 AIIA 321 >gi|71906387|ref|YP_283974.1| flagellar basal body P-ring biosynthesis protein FlgA [Dechloromonas aromatica RCB] gi|71846008|gb|AAZ45504.1| flagellar protein FlgA [Dechloromonas aromatica RCB] Length = 225 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +S+ V +V G+ V + + AG+++ + M S + Sbjct: 86 PNIWSVLVPVQI----AVTGNYVTTTRPLAAGQLVQPGDIATMSGDLSQLPTGIVTDPTS 141 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 VG R L + L VI +G VR+I +S+ G A+++A+ G V Sbjct: 142 AVGKTLRNSLGAGQPLRSDQLLPTLVIRQGQSVRVISQGAGFAVSSEGKAINNAAEGQVA 201 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+ + +G +SG G+V V Sbjct: 202 QVR-MPSGQTLSGIAKADGSVEV 223 >gi|294679030|ref|YP_003579645.1| flagella basal body P-ring formation protein FlgA [Rhodobacter capsulatus SB 1003] gi|294477850|gb|ADE87238.1| flagella basal body P-ring formation protein FlgA [Rhodobacter capsulatus SB 1003] Length = 141 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 4/121 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + A V+ ES L + VGL TR + P I + L Sbjct: 22 VVAARTLRAQTVITESDLALSEEDVP----GALTDPLSAVGLETRTAIYPQQPISAADLV 77 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P VI R V + G+++I T G AL ++GD I V NI + + + G Sbjct: 78 APAVIERNQMVPLAYRDGSLSILTEGRALDRGAVGDTIRVMNITSKATLFAQLGADGVAY 137 Query: 149 V 149 V Sbjct: 138 V 138 >gi|330860611|emb|CBX70908.1| flagella basal body P-ring formation protein flgA [Yersinia enterocolitica W22703] Length = 161 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V GH V + + AGE + +K Q + G V+ R + + Sbjct: 34 QVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 93 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG+V Sbjct: 94 TRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTVA 152 Query: 143 DTGTVRVVV 151 D GTV +++ Sbjct: 153 DDGTVHILL 161 >gi|238785501|ref|ZP_04629484.1| Flagella basal body P-ring formation protein flgA [Yersinia bercovieri ATCC 43970] gi|238713603|gb|EEQ05632.1| Flagella basal body P-ring formation protein flgA [Yersinia bercovieri ATCC 43970] Length = 234 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G VV + + AG + ++ Q + G V+ R + + Sbjct: 107 QVSGRYVVATRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPHFAQGAVSLRQINAGQPL 166 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R ++I G V+++ +++ G A+++A+I D + V+ + +G +VSG V Sbjct: 167 TRNMLRRLWIIKSGQDVQVLAQGEGFNVNSYGKAMNNAAIQDNLRVR-MASGQIVSGVVG 225 Query: 143 DTGTVRVVV 151 + GT+R+++ Sbjct: 226 EDGTIRIML 234 >gi|254470124|ref|ZP_05083528.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062] gi|211960435|gb|EEA95631.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062] Length = 322 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 51/114 (44%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + ++ G ++ + +++ + S G + D++G+ RR + I + P Sbjct: 191 ARNLDRGAIITANDVRQERKPASRYAGREFLAAADLIGMEVRRNMRSGSTITPRDVSTPV 250 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ RGAKV ++ M IST G A S+ D+I + N + + V+ Sbjct: 251 LVKRGAKVTVLYKIPGMNISTQGKAKSEGGKNDLIEILNPTSKKTILAEVIGKN 304 >gi|187925765|ref|YP_001897407.1| flagella basal body P-ring formation protein FlgA [Burkholderia phytofirmans PsJN] gi|187716959|gb|ACD18183.1| flagella basal body P-ring formation protein FlgA [Burkholderia phytofirmans PsJN] Length = 504 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + + + GEVL + L + + VG Sbjct: 368 WTIYLQARISLHAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 VT + + +L +S G VR++ IS G A+++AS G + VK Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504 >gi|254562215|ref|YP_003069310.1| flageller protein FlgA [Methylobacterium extorquens DM4] gi|254269493|emb|CAX25459.1| Flageller protein FlgA [Methylobacterium extorquens DM4] Length = 348 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V + +N GE + + L + + + + VVG V +R L V Sbjct: 205 AVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +++RG V I+ +++S GIA +G ++V N + ++ V Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324 Query: 142 VDTGTVRV 149 + G V V Sbjct: 325 IAPGRVSV 332 >gi|188582485|ref|YP_001925930.1| flagella basal body P-ring formation protein FlgA [Methylobacterium populi BJ001] gi|179345983|gb|ACB81395.1| flagella basal body P-ring formation protein FlgA [Methylobacterium populi BJ001] Length = 348 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V + +N GE + + L + + + + VVG V +R L V Sbjct: 205 AVETREVAVLTRSLNRGEAVASADLTLERRPRDAVPADVQGAPSLVVGQVAQRPLSAGSV 264 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +++RG V I+ +++S G+A +G ++V N + ++ V Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSMRGVANESGRLGASVSVTNGASKKVLQAVV 324 Query: 142 VDTGTVRV 149 + G V V Sbjct: 325 IGPGRVSV 332 >gi|170694388|ref|ZP_02885542.1| flagella basal body P-ring formation protein FlgA [Burkholderia graminis C4D1M] gi|170140811|gb|EDT08985.1| flagella basal body P-ring formation protein FlgA [Burkholderia graminis C4D1M] Length = 532 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + S ++AGEVL + L + + + +G Sbjct: 396 WTIYLQARVSLHAT----YYLASRAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQALG 451 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 VT + + +L +S G VR++ IS G A+++AS G + VK Sbjct: 452 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISAEGSAMNNASPGQQVRVK 511 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 512 -TANGQVISGIVKDGSTVEIQL 532 >gi|83594176|ref|YP_427928.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodospirillum rubrum ATCC 11170] gi|83577090|gb|ABC23641.1| Flageller protein FlgA [Rhodospirillum rubrum ATCC 11170] Length = 360 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 49/120 (40%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V S + E++ + ++ + + D+VG+ R + + + + R Sbjct: 228 VLSRRVGRDEIIGPRDVSFLRERLDRLPPDAITDAADLVGMAPRVAVRDGQPLRRADVVR 287 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 P ++ +GA V + L + +S G AL + GD + V N + + +V V V Sbjct: 288 PTLLKKGALVTMELRMPGIAVSAQGRALDSGAEGDTVRVINTASNQTILATVSGGNRVIV 347 >gi|320530442|ref|ZP_08031500.1| flagella basal body P-ring formation protein FlgA [Selenomonas artemidis F0399] gi|320137275|gb|EFW29199.1| flagella basal body P-ring formation protein FlgA [Selenomonas artemidis F0399] Length = 254 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 51/126 (40%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V H +V I ++ + + + + G V R + D VI Sbjct: 127 VYDHVLVAMTDIRQETEISPANARIEERAVDTAPAVTLTDFSKLGGRVAGRWIRKDTVIT 186 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + L P VI G V +I + + G A+ IG I V+N+ +G ++ G V+D Sbjct: 187 PNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRVRNVRSGKILRGKVID 246 Query: 144 TGTVRV 149 TV++ Sbjct: 247 GETVQI 252 >gi|148980287|ref|ZP_01815974.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3] gi|145961306|gb|EDK26616.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3] Length = 235 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 54/119 (45%), Gaps = 1/119 (0%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + + G+ L + + + + ++ G +R + ++ S ++ Sbjct: 117 ANKTLKKGQRLTHDDIAIEPIKLYKDQKVFFK-ANEIAGSKIKRSVNKGDLLTTSSMYLD 175 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 Y + +G V ++ ++ + T G+AL IGD ++VKN +G ++ G V++ VR+ Sbjct: 176 YAVEKGHAVDVVFQSKSIRLETLGMALESGLIGDTVSVKNQQSGKLLRGVVIEKNRVRI 234 >gi|227328334|ref|ZP_03832358.1| flagellar basal body P-ring biosynthesis protein FlgA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 222 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V + +IN G L E ++ + + ++ G V R L P VI Sbjct: 95 QVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDLTPGQVI 154 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S++ R +V+ G V+II T++ G A+++A+ G + V+ + G +VSG Sbjct: 155 TASMIRRAWVVKAGQSVQIIAQGEGFTVNGEGKAMNNAAAGQAVRVR-MANGQIVSGITN 213 Query: 143 DTGTVRV 149 + G + + Sbjct: 214 EDGIILI 220 >gi|170703816|ref|ZP_02894518.1| flagella basal body P-ring formation protein FlgA [Burkholderia ambifaria IOP40-10] gi|170131278|gb|EDS99903.1| flagella basal body P-ring formation protein FlgA [Burkholderia ambifaria IOP40-10] Length = 145 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + VG Sbjct: 9 WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 64 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL++A+ G I V+ Sbjct: 65 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 124 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 125 -MAAGQIVTAIVKDAGTVEI 143 >gi|85859197|ref|YP_461399.1| flagellar basal body P-ring biosynthesis protein [Syntrophus aciditrophicus SB] gi|85722288|gb|ABC77231.1| flagellar basal body P-ring biosynthesis protein [Syntrophus aciditrophicus SB] Length = 244 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 56/127 (44%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V + + + ++E + ++ S + + + ++G R + Sbjct: 116 EVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERIIGKRLLRSIKERSTF 175 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 S+L P + +G V++I G ++I+T G+A + ++G + +KNI + ++ V+ Sbjct: 176 TASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVI 235 Query: 143 DTGTVRV 149 V+V Sbjct: 236 GNSVVKV 242 >gi|315497880|ref|YP_004086684.1| flagella basal body p-ring formation protein flga [Asticcacaulis excentricus CB 48] gi|315415892|gb|ADU12533.1| flagella basal body P-ring formation protein FlgA [Asticcacaulis excentricus CB 48] Length = 258 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A + +V + ++AGEV+ + + V G+ + +G R + V Sbjct: 115 AGRTKNVLVFTRSLSAGEVIAAADIAWQPVQAHLAGGSLVSDPEAAIGKTVRLPVRDGGV 174 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + L P VI R V + +T+S G A D ++GD+I V+N + ++ + Sbjct: 175 VRPGDLTAPLVIRRAEMVMVTFEMNGVTLSMTGPAQKDGAVGDLILVQNPASKKLIEAVI 234 Query: 142 VDTGTVRV 149 G+ V Sbjct: 235 TGPGSAAV 242 >gi|261344146|ref|ZP_05971790.1| flagella basal body P-ring formation protein FlgA [Providencia rustigianii DSM 4541] gi|282567739|gb|EFB73274.1| flagella basal body P-ring formation protein FlgA [Providencia rustigianii DSM 4541] Length = 222 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 1/128 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V G V + IN GE + + + + A + G + R + + Sbjct: 95 VTGQYYVATRNINRGETIEFVDIGTKKGLIHQLPSGAATEKIALRGTIALRNITAGQTLT 154 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 S++ RP+ I G V + T N ++ G A+++A IG+ I V+ + G +V+G + Sbjct: 155 NSMVRRPWAIKSGQTVHVFATGNNFSVKYEGRAINNAVIGENIRVR-LINGQVVNGEAQE 213 Query: 144 TGTVRVVV 151 G+V+V + Sbjct: 214 NGSVQVAL 221 >gi|91785638|ref|YP_560844.1| putative flagella basal body P-ring formation protein [Burkholderia xenovorans LB400] gi|91689592|gb|ABE32792.1| putative flagella basal body P-ring formation protein [Burkholderia xenovorans LB400] Length = 502 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + + + GEVL + L + + VG Sbjct: 366 WTIYLQARISLRAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 421 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 VT + + +L +S G VR++ IS G A+++AS G + VK Sbjct: 422 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGQGFAISAEGSAMNNASPGQQVRVK 481 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 482 -TANGQIISGIVKDGSTVEIQL 502 >gi|219681696|ref|YP_002468082.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682251|ref|YP_002468635.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621984|gb|ACL30140.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624539|gb|ACL30694.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087230|gb|ADP67310.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087749|gb|ADP67828.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 226 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ G +V + I G + ES LK + + N KDVV ++ R P Sbjct: 95 TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFFP 154 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 I + +++ +V +I+ N +S+ +LS+ + I VK ++G +++ Sbjct: 155 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 213 Query: 139 GSVVDTGTVRV 149 G + + G V V Sbjct: 214 GIINENGEVIV 224 >gi|15606189|ref|NP_213566.1| flagellar protein FlgA [Aquifex aeolicus VF5] gi|6225340|sp|O67005|FLGA_AQUAE RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|2983376|gb|AAC06962.1| flagellar protein FlgA [Aquifex aeolicus VF5] Length = 223 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V I GE LN S ++E ++ N+ ++ V V + + ++ S Sbjct: 102 RVLVAKRDIYPGERLNFSNVEEREIYLERCPQNF---KENFVNFVALKEIKKGTIVRRSY 158 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L + +++ RG V + GN+ I AL + G+VI V + + ++ G ++ GT Sbjct: 159 LKKEFLVKRGEIVNAVYENGNVVIRFRTKALENGYYGEVIRVLSPFSRKVIRGKIIGEGT 218 Query: 147 VRVV 150 V+++ Sbjct: 219 VKIL 222 >gi|330818589|ref|YP_004362294.1| flagellar basal body P-ring formation protein FlgA [Burkholderia gladioli BSR3] gi|327370982|gb|AEA62338.1| flagellar basal body P-ring formation protein FlgA [Burkholderia gladioli BSR3] Length = 539 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LY+ S S V G V + ++ GEVL + L + + VG Sbjct: 403 WTLYLQSKIS----VQGTYYVAARALSPGEVLTAADLVAHDGDLTQLPLAIITDPGQAVG 458 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + +L ++ G VR++ TIS+ G +++A G + V+ Sbjct: 459 GTSLVRVAAGLPLRQDMLRSAASVTIGQTVRVVAAGKGFTISSEGSVMNNAGPGQQVRVR 518 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D+GTV + Sbjct: 519 -LAAGQIVTAVVKDSGTVEI 537 >gi|27380940|ref|NP_772469.1| flagellar basal body P-ring biosynthesis protein FlgA [Bradyrhizobium japonicum USDA 110] gi|27354106|dbj|BAC51094.1| blr5829 [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 1/122 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V + I+ ++L S + + + + G A S +G+ RR + I ++ + Sbjct: 196 VAVLTRDIDRADLLKSSDVALERRPKAEVTGEAA-SRDRTIGMQLRRPMRAGTPIRVADI 254 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P + R V II + ++T G A+ + GD ++V N+ + ++G V G + Sbjct: 255 VKPDFVQRDQNVTIIYQVPGLYLTTRGKAIESGAEGDTVSVLNLQSKRTLTGVVTGRGQI 314 Query: 148 RV 149 V Sbjct: 315 TV 316 >gi|15616942|ref|NP_240155.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386803|sp|P57418|FLGA_BUCAI RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|25323453|pir||A84969 hypothetical protein flgA [imported] - Buchnera sp. (strain APS) gi|10039007|dbj|BAB13041.1| flagella basal body P-ring formation protein flgA precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 226 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ G +V + I G + ES LK + + N KDVV ++ R P Sbjct: 95 TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFP 154 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 I + +++ +V +I+ N +S+ +LS+ + I VK ++G +++ Sbjct: 155 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 213 Query: 139 GSVVDTGTVRV 149 G + + G V V Sbjct: 214 GIINENGEVIV 224 >gi|238751758|ref|ZP_04613246.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei ATCC 43380] gi|238710029|gb|EEQ02259.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei ATCC 43380] Length = 224 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G+ V + + +G + + Q + G V+ R + + Sbjct: 97 QVSGYYAVAARQLASGAKITPQDIVMKQGRLDTLPPGALLEPNFAQGAVSLRQINAGQPL 156 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G V+++ +++ G A+++A+I D + V+ + +G +VSG++ Sbjct: 157 TRNMLRRQWVIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MASGQIVSGTLA 215 Query: 143 DTGTVRVVV 151 + G +R+++ Sbjct: 216 EDGIIRIIL 224 >gi|206558964|ref|YP_002229724.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia cenocepacia J2315] gi|198035001|emb|CAR50873.1| putative flagellar basal body P-ring formation protein FlgA [Burkholderia cenocepacia J2315] Length = 403 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L+ + L + + +G Sbjct: 267 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 322 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G L++A+ G + V+ Sbjct: 323 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 382 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 383 -MAAGQIVTAIVKDAGTVEI 401 >gi|292669969|ref|ZP_06603395.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas noxia ATCC 43541] gi|292648381|gb|EFF66353.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas noxia ATCC 43541] Length = 255 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 54/128 (42%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V +V I A ++ + + + + + G V R + D VI Sbjct: 127 TVYDRVLVAMTDIRAETEISPANARVEERAVDTVPELTLTDFTRLEGRVAGRYIRRDTVI 186 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L P V+ G V ++ + + G+A+ IG I V+N +G ++ G ++ Sbjct: 187 TPPMLAMPLVVRAGNAVELVHNANGILVRAEGVAIESGRIGYTIRVRNARSGKIMRGRII 246 Query: 143 DTGTVRVV 150 D TV+++ Sbjct: 247 DAQTVQII 254 >gi|163856431|ref|YP_001630729.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella petrii DSM 12804] gi|163260159|emb|CAP42461.1| flagella basal body P-ring formation protein FlgA [Bordetella petrii] Length = 241 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++ YV + S+ G V + +I AG+ + + L + +VG Sbjct: 105 WTQYVQATVSVR----GQYYVAAHMIPAGQTIQANDLDARDGDLVALPHGVVVDPAAIVG 160 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R + I + L ++RG +VRI IS+ G AL DA G + V+ Sbjct: 161 MRARYRIAAGQAIKGTALRSARAVTRGQQVRITARGAGFVISSEGEALDDAPPGAPVQVR 220 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V + V VV+ Sbjct: 221 -TPSGQVVSGIVRNATLVEVVL 241 >gi|212709488|ref|ZP_03317616.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM 30120] gi|212687826|gb|EEB47354.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM 30120] Length = 223 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L +V G V + I GE + + + + + + G + R + Sbjct: 92 LTVNVTGQYYVATRNIQRGETIEFVDIGTKKGLIHQLPSGASTDKMALRGTLALRNITAG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 S++ RP+ I G V + T N ++ G A+++A IG+ I V+ + G +V+G Sbjct: 152 QTFTNSMVRRPWAIKAGQTVYVFATGDNFSVKYEGRAINNAVIGENIRVR-LINGQVVNG 210 Query: 140 SVVDTGTVRVVV 151 + G+V V + Sbjct: 211 EAQENGSVHVAL 222 >gi|311280021|ref|YP_003942252.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae SCF1] gi|308749216|gb|ADO48968.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae SCF1] Length = 219 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G VV + I G L + + + G V+ R L P Sbjct: 89 VVVEATGDYVVAAQAIARGATLQAESVTLKRGRLDQLPPKTMLDPAQAQGAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + LS+L + + + G +V++I + ++++ G AL++A++ V+ + +G +VSG Sbjct: 149 QPVQLSMLRQSWRVKAGQRVQVIASGDGFSVNSQGQALNNAAVAQNARVR-MPSGQIVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 MVNADGNILI 217 >gi|332994168|gb|AEF04223.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas sp. SN2] Length = 240 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + L+ + + + VV S ++ G VL+ S L V +R + + ++G Sbjct: 106 WYLFTSAQVTRTKEI----VVTSGAVSPGTVLSASNLTLASVDIKRLRYSAFTDVDALIG 161 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 +R ++ + ++L + +G ++ I + G M + T+GIA D IGD I V Sbjct: 162 ARMKRRIVDGQAVQSNML---CFVCKGDRITIRASLGGMAVKTSGIAQQDGVIGDTIKVL 218 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N + V V V V Sbjct: 219 NASSQKPVIAEVASAQEVVV 238 >gi|296157460|ref|ZP_06840295.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. Ch1-1] gi|295892232|gb|EFG72015.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. Ch1-1] Length = 504 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + + + GEVL + L + + VG Sbjct: 368 WTIYLQARISLRAT----YYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 VT + + +L +S G VR++ IS G A+++AS G + VK Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504 >gi|323527717|ref|YP_004229870.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1001] gi|323384719|gb|ADX56810.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp. CCGE1001] Length = 527 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + SL A+ + ++ GEVL + L + + VG Sbjct: 391 WTIYLQARVSLHAT----YYLAGRAMSVGEVLTAADLVARDGDLTGLPQAIVTDPAQAVG 446 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 VT + + +L +S G VR++ IS+ G A+++AS G + VK Sbjct: 447 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISSEGSAMNNASPGQQVRVK 506 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G ++SG V D TV + + Sbjct: 507 -TANGQIISGIVKDGATVEIQL 527 >gi|170734378|ref|YP_001766325.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia cenocepacia MC0-3] gi|169817620|gb|ACA92203.1| flagella basal body P-ring formation protein FlgA [Burkholderia cenocepacia MC0-3] Length = 408 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L+ + L + + +G Sbjct: 272 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 327 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G L++A+ G + V+ Sbjct: 328 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 387 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 388 -MAAGQIVTAIVKDAGTVEI 406 >gi|257471390|ref|ZP_05635389.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311086073|gb|ADP66155.1| flagella basal-body P-ring formation protein FlgA precursor [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 229 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++ G +V + I G + ES LK + + N KDVV ++ R P Sbjct: 98 TVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFFP 157 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 I + +++ +V +I+ N +S+ +LS+ + I VK ++G +++ Sbjct: 158 LQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIIN 216 Query: 139 GSVVDTGTVRV 149 G + + G V V Sbjct: 217 GIINENGEVIV 227 >gi|261339372|ref|ZP_05967230.1| flagella basal body P-ring formation protein FlgA [Enterobacter cancerogenus ATCC 35316] gi|288318173|gb|EFC57111.1| flagella basal body P-ring formation protein FlgA [Enterobacter cancerogenus ATCC 35316] Length = 219 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + I G L S + + + I V+ R + P Sbjct: 89 VAVQATGNYVVAAQPIVRGSQLQASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS++ + + + G +V ++ +I + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLSMIRQAWRVKAGQQVMVVANGDGFSIKSEGKALNNAAVAQNARVR-MSSGQVVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVGSDGNILI 217 >gi|134297202|ref|YP_001120937.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia vietnamiensis G4] gi|134140359|gb|ABO56102.1| SAF domain protein [Burkholderia vietnamiensis G4] Length = 443 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + + V V + I GE L + L + + +G Sbjct: 307 WTVYLQAKVT----VQATYYVAARQIAPGEPLTAADLIARNGDLTVLPLAVITDPAQAIG 362 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + +L +S G VR++ TIS G AL++A+ G + V+ Sbjct: 363 ATSLARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGNALANAAPGQSVRVR 422 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 423 -MAAGQIVTAIVKDAGTVEI 441 >gi|171322729|ref|ZP_02911475.1| flagella basal body P-ring formation protein FlgA [Burkholderia ambifaria MEX-5] gi|171091921|gb|EDT37390.1| flagella basal body P-ring formation protein FlgA [Burkholderia ambifaria MEX-5] Length = 188 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + VG Sbjct: 52 WTVYLQAKV----AVQATYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 107 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G AL+ A+ G + V+ Sbjct: 108 ATALARISAGLPLRQDLLKSAASVSAGQTVRVVAAGPGFTISAEGSALATAAPGQSVRVR 167 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 168 -MAAGQIVTAIVKDAGTVEI 186 >gi|291326358|ref|ZP_06124207.2| flagella basal body P-ring formation protein FlgA [Providencia rettgeri DSM 1131] gi|291314705|gb|EFE55158.1| flagella basal body P-ring formation protein FlgA [Providencia rettgeri DSM 1131] Length = 212 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +V G V + IN GE + + + + + + G V R + Sbjct: 78 FIQLTVNVTGQYYVATRNINRGEPIQFVDIGTKKGLLHKLPAGASTDKIALRGAVALRNI 137 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 S+ +P+ I G V + + N ++ G A+++A+ G V+ + G + Sbjct: 138 PAGQTFTKSMTRQPWAIKAGQTVFVFASGDNFSVKYEGRAINNATAGQNTRVR-LLNGQV 196 Query: 137 VSGSVVDTGTVRVVVK 152 V+G ++ G+V+V +K Sbjct: 197 VNGEALENGSVQVALK 212 >gi|163852463|ref|YP_001640506.1| flagella basal body P-ring formation protein FlgA [Methylobacterium extorquens PA1] gi|163664068|gb|ABY31435.1| flagella basal body P-ring formation protein FlgA [Methylobacterium extorquens PA1] Length = 348 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V + +N GE + + L + + + + VVG V +R L V Sbjct: 205 AVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +++RG V I+ +++S GIA +G ++V N + ++ V Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANECGRLGASVSVTNAASKKVLQAVV 324 Query: 142 VDTGTVRV 149 + G V V Sbjct: 325 IAPGRVSV 332 >gi|218531219|ref|YP_002422035.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] gi|218523522|gb|ACK84107.1| flagella basal body P-ring formation protein FlgA [Methylobacterium chloromethanicum CM4] Length = 348 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V + +N GE + + L + + + + VVG V +R L V Sbjct: 205 AVETREVAVLTRSLNRGEAVASADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +++RG V I+ +++S GIA +G ++V N + ++ V Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324 Query: 142 VDTGTVRV 149 + G V V Sbjct: 325 IAPGRVSV 332 >gi|294635606|ref|ZP_06714083.1| flagella basal body P-ring formation protein FlgA [Edwardsiella tarda ATCC 23685] gi|291091058|gb|EFE23619.1| flagella basal body P-ring formation protein FlgA [Edwardsiella tarda ATCC 23685] Length = 227 Score = 93.4 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V +N G+ L+ ++ + Q + + + G R + I Sbjct: 100 QVTGRYPVTVKALNRGQNLSATQFRLTQGRLDTLPPGTILDLTRLEGATVLRNIGAGQPI 159 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +++ R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG Sbjct: 160 AATMVRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 218 Query: 143 DTGTVRVVV 151 GT+ V + Sbjct: 219 GPGTLSVTL 227 >gi|105894146|gb|ABF77311.1| Flagellar protein FlgA [Burkholderia cenocepacia AU 1054] gi|116649133|gb|ABK09774.1| flagellar protein FlgA [Burkholderia cenocepacia HI2424] Length = 405 Score = 93.4 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L+ + L + + +G Sbjct: 269 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 324 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G L++A+ G + V+ Sbjct: 325 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 384 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 385 -MAAGQIVTAIVKDAGTVEI 403 >gi|238919255|ref|YP_002932770.1| flagella basal body P-ring formation protein FlgA, [Edwardsiella ictaluri 93-146] gi|238868824|gb|ACR68535.1| flagella basal body P-ring formation protein FlgA, putative [Edwardsiella ictaluri 93-146] Length = 223 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + G+ L ++L+ + ++ I + G T R + I Sbjct: 96 QVTGSYPVAIHALPRGQNLTAAQLRLTRGRLDSLPPGTILDIARLSGATTLRSIGAGQPI 155 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G +V+I+ +S+ G A+++A++ DV+ V+ +G ++SG Sbjct: 156 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVQVR-TASGQVISGKAS 214 Query: 143 DTGTVRVVV 151 GT+ +V+ Sbjct: 215 GPGTLTLVL 223 >gi|167617580|ref|ZP_02386211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia thailandensis Bt4] Length = 212 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 76 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 131 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIST G L++A+ G + V+ Sbjct: 132 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 191 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 192 -MAAGQIVTAIVKDAATVEI 210 >gi|253998492|ref|YP_003050555.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp. SIP3-4] gi|313200567|ref|YP_004039225.1| flagella basal body p-ring formation protein flga [Methylovorus sp. MP688] gi|253985171|gb|ACT50028.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp. SIP3-4] gi|312439883|gb|ADQ83989.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp. MP688] Length = 242 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 5/143 (3%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +++Y+ + + V+G +V + + G V++ L + + + Sbjct: 103 APAWTIYMQATVN----VVGQYLVAAAPLAQGRVVDSGDLLFESGDLAQLPPGIFTDPEQ 158 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +G + + V+ +L V+ +G V +I +IS G AL++A+ G ++ Sbjct: 159 AIGRIVNISMNAGTVLRQEMLKASPVVQQGQTVTLITRGKGFSISAEGHALNNATDGQLV 218 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 VK + G +VSG + G + V Sbjct: 219 RVK-VANGQVVSGIARNGGKIEV 240 >gi|308186389|ref|YP_003930520.1| Flagella basal body P-ring formation protein flgA precursor [Pantoea vagans C9-1] gi|308056899|gb|ADO09071.1| Flagella basal body P-ring formation protein flgA precursor [Pantoea vagans C9-1] Length = 219 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + ++N G ++ES + + V V R + P Sbjct: 89 VQVQVTGSYLVATRLLNQGSSVSESDFTLQTGRLDTLPARALLNADAVADAVVLRDIQPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I S L +P+ + G V +I + S G AL++A+ + V+ + G +VSG Sbjct: 149 QPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQIVSG 207 Query: 140 SVVDTGTVRVVV 151 V + G + + + Sbjct: 208 KVREDGNILITL 219 >gi|32477361|ref|NP_870355.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula baltica SH 1] gi|32447912|emb|CAD77432.1| similar to LfgA (potential lateral flagellar protein similar to FlgA) [Rhodopirellula baltica SH 1] Length = 477 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 51/123 (41%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + G + + + + G+ + +V+G+ ++ + S Sbjct: 336 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 395 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ RG V + ++ G + ++T AL D + ++I ++ + + VV+ V Sbjct: 396 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 455 Query: 148 RVV 150 +V Sbjct: 456 EIV 458 >gi|313894969|ref|ZP_07828528.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 137 str. F0430] gi|312976422|gb|EFR41878.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp. oral taxon 137 str. F0430] Length = 233 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 52/127 (40%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V +V I ++ + + + + + G V R + D VI Sbjct: 105 TVYDRVLVAMTDIRQEAEISPANARIEERAVDTVPAVTLTDFSKLGGRVAGRWIRKDTVI 164 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + L P VI G V +I + + G A+ IG I V+N+ +G ++ G V+ Sbjct: 165 TPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIGYTIRVRNVRSGKILRGKVI 224 Query: 143 DTGTVRV 149 D TV++ Sbjct: 225 DAETVQI 231 >gi|237810457|ref|YP_002894908.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei MSHR346] gi|237503791|gb|ACQ96109.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei MSHR346] Length = 509 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507 >gi|119899031|ref|YP_934244.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp. BH72] gi|119671444|emb|CAL95357.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp. BH72] Length = 256 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 5/145 (3%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ Y+ + S V+G +V + + AG+++ + L + + N + Sbjct: 116 SPVEWTAYLQARVS----VLGEYLVTAQPLRAGQIIGPADLVRRDGDLATLPDNTLTDVA 171 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 G TR + + +L P + +G V+++ +S+ G+AL++ + GD Sbjct: 172 QASGQYTRFAIAQGSPLRADMLRIPPAVRQGQTVQVVTVGSGFRVSSEGVALNNGAPGDP 231 Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVV 150 + V+ + G +V+G+ G V V Sbjct: 232 VRVR-LGGGQVVTGAARAGGVVEVT 255 >gi|240139800|ref|YP_002964277.1| Flageller protein FlgA [Methylobacterium extorquens AM1] gi|240009774|gb|ACS41000.1| Flageller protein FlgA [Methylobacterium extorquens AM1] Length = 348 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V + +N GE + + L + + + + VVG V +R L V Sbjct: 205 AVETREVAVLTRSLNRGEAVAGADLTVERRPRDGVPNDVQGAPTLVVGQVAQRPLSAGAV 264 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + P +++RG V I+ +++S GIA +G ++V N + ++ V Sbjct: 265 LRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVV 324 Query: 142 VDTGTVRV 149 + G V V Sbjct: 325 IAPGRVSV 332 >gi|327537338|gb|EGF24071.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula baltica WH47] Length = 476 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 51/123 (41%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + G + + + + G+ + +V+G+ ++ + S Sbjct: 335 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 394 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 P ++ RG V + ++ G + ++T AL D + ++I ++ + + VV+ V Sbjct: 395 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 454 Query: 148 RVV 150 +V Sbjct: 455 EIV 457 >gi|304558587|gb|ADM41251.1| Flagellar basal-body P-ring formation protein FlgA [Edwardsiella tarda FL6-60] Length = 224 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V ++ G+ L ++L+ + ++ I + G R + I Sbjct: 97 QVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQPI 156 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG Sbjct: 157 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 215 Query: 143 DTGTVRVVV 151 GT+ +V+ Sbjct: 216 GPGTLTLVL 224 >gi|269138578|ref|YP_003295278.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella tarda EIB202] gi|267984238|gb|ACY84067.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella tarda EIB202] Length = 249 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V ++ G+ L ++L+ + ++ I + G R + I Sbjct: 122 QVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQPI 181 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG Sbjct: 182 AATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKAS 240 Query: 143 DTGTVRVVV 151 GT+ +V+ Sbjct: 241 GPGTLTLVL 249 >gi|126453246|ref|YP_001064560.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 1106a] gi|242316721|ref|ZP_04815737.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 1106b] gi|126226888|gb|ABN90428.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 1106a] gi|242139960|gb|EES26362.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 1106b] Length = 507 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 371 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 426 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 427 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 486 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 487 -MAAGQIVTAIVKDAATVEI 505 >gi|217424999|ref|ZP_03456495.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 576] gi|254196807|ref|ZP_04903231.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei S13] gi|169653550|gb|EDS86243.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei S13] gi|217392019|gb|EEC32045.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 576] Length = 509 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 429 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507 >gi|118581850|ref|YP_903100.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504560|gb|ABL01043.1| SAF domain protein [Pelobacter propionicus DSM 2379] Length = 238 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 58/131 (44%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + + VV IN G V+ + L + + ++G Y +D VG R L P+ Sbjct: 107 VEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPN 166 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L + +I G V II M I+ G + S + GD I V+N+ + + Sbjct: 167 AAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPA 226 Query: 140 SVVDTGTVRVV 150 V+D+ TV +V Sbjct: 227 RVLDSTTVLIV 237 >gi|39936962|ref|NP_949238.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris CGA009] gi|39650819|emb|CAE29342.1| Flageller protein FlgA [Rhodopseudomonas palustris CGA009] Length = 342 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + + EV+ S + + S + + A S +G+ R+ L V+ + L Sbjct: 208 ATVLTRPVQRNEVIKVSDIVIERRPKSEVASD-AASRDAAIGMQARQTLRSGQVLRSADL 266 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P +++R V +I + ++ G AL + GDV+ V N+ + ++G+V+ G V Sbjct: 267 AKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQV 326 Query: 148 RVVV 151 + V Sbjct: 327 AITV 330 >gi|167579483|ref|ZP_02372357.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia thailandensis TXDOH] Length = 209 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 73 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 128 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIST G L++A+ G + V+ Sbjct: 129 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 188 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 189 -MAAGQIVTAIVKDAATVEI 207 >gi|126440298|ref|YP_001057318.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 668] gi|126219791|gb|ABN83297.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 668] Length = 509 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507 >gi|15644289|ref|NP_229341.1| flagellar protein FlgA, putative [Thermotoga maritima MSB8] gi|4982108|gb|AAD36608.1|AE001800_18 flagellar protein FlgA, putative [Thermotoga maritima MSB8] Length = 286 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E ++ + I G + +VVG ++RR L V+ + Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P + +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278 Query: 147 VRVV 150 +R++ Sbjct: 279 LRIL 282 >gi|134283631|ref|ZP_01770330.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] gi|134245040|gb|EBA45135.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] Length = 509 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + V V + I GE L + L + + + VG Sbjct: 373 WTIYLQAK----LVVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507 >gi|192292790|ref|YP_001993395.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodopseudomonas palustris TIE-1] gi|192286539|gb|ACF02920.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas palustris TIE-1] Length = 342 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + + EV+ S + + S + + A S +G+ R+ L V+ + L Sbjct: 208 ATVLTRPVQRNEVIKVSDIVIERRPKSEVASD-AASRDAAIGMQARQTLRSGQVLRGADL 266 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P +++R V +I + ++ G AL + GDV+ V N+ + ++G+V+ G V Sbjct: 267 AKPDLVTRDQGVTLIYRAAGIYLTARGKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQV 326 Query: 148 RVVV 151 + V Sbjct: 327 AITV 330 >gi|295096229|emb|CBK85319.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 224 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV +V I G +L + + + I V+ R + P Sbjct: 94 VAVQATGNYVVAAVPIPRGSLLQPDSVTLKRGRLDQLPPRTMLDINQAQEAVSLRDVAPG 153 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + + G +V ++ +I++ G AL++A++ V+ + +G +VSG Sbjct: 154 QAIQLSMLRQAWRVKAGQQVMVVANGEGFSINSEGKALNNAAVAQNARVR-MSSGQVVSG 212 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 213 TVGPDGNILI 222 >gi|257095363|ref|YP_003169004.1| flagella basal body P-ring formation protein FlgA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047887|gb|ACV37075.1| flagella basal body P-ring formation protein FlgA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 234 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV V G ++ + + AG+++ +S + + G Sbjct: 98 WTVYVPVQV----RVAGTYLLTARQLTAGQIVADSDVLMQGGDLGALPAGVLTDPAQARG 153 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + + +L P+ + +G V+++ T T+S G AL++AS G V V+ Sbjct: 154 KTVRSSVAAGQPLRGDLLIAPWSVQQGQSVKLVSTGTGFTVSNEGKALNNASEGQVAQVR 213 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG G V V Sbjct: 214 -TASGQVVSGVARGLGIVEVTY 234 >gi|326404068|ref|YP_004284150.1| flagellar basal-body ring component protein [Acidiphilium multivorum AIU301] gi|325050930|dbj|BAJ81268.1| flagellar basal-body ring component protein [Acidiphilium multivorum AIU301] Length = 332 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 53/129 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A+ +V + GE++ + +K V + + D +G+ R + Sbjct: 181 AAQAERVIVARRTLEPGEIVTINDVKMSWVARAALPQGTLTQAADALGMQVDRRIAAGTP 240 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + V+ + +++RGA V + + + ++ G+AL+ G VI V N + +V + Sbjct: 241 LSKRVVAQVMMVNRGATVNLAVEMPGLEVTAEGVALAAGPKGAVIPVLNPSSHEVVQAVI 300 Query: 142 VDTGTVRVV 150 V+ Sbjct: 301 DGENHAHVI 309 >gi|221640824|ref|YP_002527086.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter sphaeroides KD131] gi|221161605|gb|ACM02585.1| SAF domain precursor [Rhodobacter sphaeroides KD131] Length = 148 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + A +L L + +G R L + + L Sbjct: 20 VVAARTVRALSILGPEDLALAPQDMP----GALAELSQALGQEARVTLYAGRPVRAADLG 75 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 P +I R V + G + I G ALS +GD I V N+ + VSG + + G Sbjct: 76 PPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEVGR 133 >gi|75675313|ref|YP_317734.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter winogradskyi Nb-255] gi|74420183|gb|ABA04382.1| flagellar protein FlgA [Nitrobacter winogradskyi Nb-255] Length = 380 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + ++ +L S + + + + GN S VVG+ TRR + + L Sbjct: 223 AAVLARDVDRNTLLKSSDIVIERRPRAEV-GNNPASRDHVVGMQTRRQMRAGQALHGIDL 281 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RP ++ R V +I + ++ G A + GDV++V N+ + +SG VV G V Sbjct: 282 TRPDLVQRDQAVTLIYQTAGIYLTVRGKATESGTEGDVVSVLNLQSNRTISGVVVGRGQV 341 Query: 148 RV 149 V Sbjct: 342 SV 343 >gi|304397200|ref|ZP_07379079.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB] gi|304355349|gb|EFM19717.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB] Length = 219 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + +++ G ++ES + + V V R + P Sbjct: 89 VQVQVTGSYLVANRLLSQGSSVSESDFTLQTGRLDTLPARALLNADSVADAVVLRDIQPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I S L +P+ + G V +I + S G AL++A+ + V+ + G +VSG Sbjct: 149 QPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQVVSG 207 Query: 140 SVVDTGTVRVVV 151 V + G + + + Sbjct: 208 KVREDGNILITL 219 >gi|84514783|ref|ZP_01002146.1| flagellar basal-body P-ring formation protein FlgA [Loktanella vestfoldensis SKA53] gi|84510942|gb|EAQ07396.1| flagellar basal-body P-ring formation protein FlgA [Loktanella vestfoldensis SKA53] Length = 237 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + AV + +G+ + L+ + ++ Y I+DVVG V + L P + Sbjct: 108 VTQAVFLRRPLRSGDRIQLDDLEIRPIDPLSVNNVYIT-IEDVVGRVLSQSLTPRVPVSP 166 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 L R + I+ V + + G + I + GIAL IGD I ++N+ +G V G + Sbjct: 167 RHLQRDWAINADDIVTLQIVNGGIEIESPGIALEPGQIGDNIRLRNLSSGSEVIGRISQE 226 Query: 145 GTVRVVVK 152 V+V+ K Sbjct: 227 RKVQVISK 234 >gi|332531614|ref|ZP_08407511.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624] gi|332038977|gb|EGI75406.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624] Length = 288 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 M CV+ +S+ + V+G A V + AG+ + + L+ +V + Sbjct: 144 MRCVQGATRWSVTLPVQV----QVMGSAWVLRANVPAGQAVTDQDLERREVDLAEDNSPV 199 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + G VT R L + ++ V + GA+VR+++ IS G ALS Sbjct: 200 LAT-DAWEGQVTSRGLRAGQTLRQNMFRAAKVFTSGAQVRVLVQGSGFQISAPGRALSVG 258 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +G + V+ ++ G +++ +VVD TVRV Sbjct: 259 VVGQLAQVR-MENGRVMNATVVDARTVRV 286 >gi|222447129|pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From Thermotoga Maritima Msb8 Length = 278 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E ++ + I G + +VVG ++RR L V+ + Sbjct: 144 NVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 203 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P + +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 204 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 263 Query: 147 VRVV 150 +R++ Sbjct: 264 LRIL 267 >gi|298529925|ref|ZP_07017327.1| flagella basal body P-ring formation protein FlgA [Desulfonatronospira thiodismutans ASO3-1] gi|298509299|gb|EFI33203.1| flagella basal body P-ring formation protein FlgA [Desulfonatronospira thiodismutans ASO3-1] Length = 327 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 2/128 (1%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 +F V +N G+V+ ++ + + IR R + Sbjct: 199 VFVDVWVTVACAERPLNRGDVIEPGDVRFEEKNLAYIRREVWDGESGP--WRIRSSIGQG 256 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L ++SRGAKV ++ ++T+ G L D GD I V+N+ + V Sbjct: 257 QPIYKRHLEPVPMVSRGAKVDMVYEGNHLTLVVPGEVLEDGQRGDRIMVRNMQSEKEVRA 316 Query: 140 SVVDTGTV 147 +V +G V Sbjct: 317 TVESSGRV 324 >gi|148270381|ref|YP_001244841.1| SAF domain-containing protein [Thermotoga petrophila RKU-1] gi|147735925|gb|ABQ47265.1| SAF domain [Thermotoga petrophila RKU-1] Length = 280 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E ++ + I G + +VVG ++RR L V+ + Sbjct: 153 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 212 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P + +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 213 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 272 Query: 147 VRVV 150 +R++ Sbjct: 273 LRIL 276 >gi|254295810|ref|ZP_04963267.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] gi|157806317|gb|EDO83487.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] Length = 495 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 359 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 414 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 415 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 474 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 475 -MAAGQIVTAIVKDAATVEI 493 >gi|94987184|ref|YP_595117.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00] gi|94731433|emb|CAJ54796.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00] Length = 327 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 12/126 (9%) Query: 30 VPSV--VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRRVLLPDHVIP 83 VPSV +N G+ +N + + + +R + G +R + I Sbjct: 207 VPSVGKPLNRGDYVNPEDVTWINKNIAFLRDDIWD------GKGGPWQIKRSIGIGQPIY 260 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 S L V+ +G +++ +G++ +S AL + + G I V+N+ + +V +VVD Sbjct: 261 QSDLEPLAVVRKGDIIKLNYNKGSIRLSVNVEALENGTHGSFIQVRNLQSKKIVHATVVD 320 Query: 144 TGTVRV 149 + TV + Sbjct: 321 SNTVEI 326 >gi|89056683|ref|YP_512134.1| flagellar basal body P-ring biosynthesis protein FlgA [Jannaschia sp. CCS1] gi|88866232|gb|ABD57109.1| flagellar basal-body P-ring formation protein FlgA [Jannaschia sp. CCS1] Length = 140 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 6/140 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +L+L S +V V+ + I ++ + + + I +G Sbjct: 3 WVFLILALAS--PAVAQETVIAAGTIRGATMIGPADVAVVDGETP----GALSDIYQAIG 56 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + R L P I L P ++ R V + G + + T G AL A+ G+ + V Sbjct: 57 MEARINLYPGRPIRPGDLRAPAIVERNEIVSLRYNYGGLLVMTEGRALDRAAAGEALRVI 116 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ + V+ + G V V Sbjct: 117 NLASRQTVTATATGPGLVTV 136 >gi|162218050|ref|YP_622284.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia cenocepacia AU 1054] gi|162227931|ref|YP_836667.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia cenocepacia HI2424] Length = 310 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L+ + L + + +G Sbjct: 174 WTVYLQAKV----AVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 229 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ TIS G L++A+ G + V+ Sbjct: 230 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 289 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D GTV + Sbjct: 290 -MAAGQIVTAIVKDAGTVEI 308 >gi|311105931|ref|YP_003978784.1| flagella basal body P-ring formation protein FlgA [Achromobacter xylosoxidans A8] gi|310760620|gb|ADP16069.1| flagella basal body P-ring formation protein FlgA [Achromobacter xylosoxidans A8] Length = 237 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++ YV + S V GH V + +I AG+ L L + + V G Sbjct: 101 WTAYVQATVS----VPGHYYVAARLIAAGQALTPDDLAPRDGDLIALPPGAITDPQAVAG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + S L + RGA VRI +S+ G AL +A+ G + V+ Sbjct: 157 MTAVHRINAGQAVRSSGLRNAQSVLRGANVRINARGKGFVVSSEGQALDNAAPGATVQVR 216 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G +VSG V + V + + Sbjct: 217 -TAGGQVVSGVVRNASLVEIQL 237 >gi|167822313|ref|ZP_02453784.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 9] Length = 218 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 82 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 137 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 138 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 197 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 198 -MAAGQIVTAIVKDAATVEI 216 >gi|167900902|ref|ZP_02488107.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei NCTC 13177] Length = 224 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 88 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 143 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 144 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 203 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 204 -MAAGQIVTAIVKDAATVEI 222 >gi|170288993|ref|YP_001739231.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp. RQ2] gi|170176496|gb|ACB09548.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp. RQ2] Length = 286 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E ++ + I G + +VVG ++RR L V+ + Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P + +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278 Query: 147 VRVV 150 +R++ Sbjct: 279 LRIL 282 >gi|167843903|ref|ZP_02469411.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei B7210] Length = 222 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 86 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 141 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 142 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 201 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 202 -MAAGQIVTAIVKDAATVEI 220 >gi|254261371|ref|ZP_04952425.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 1710a] gi|76579771|gb|ABA49246.1| flagella basal body P-ring formation protein FlgA, putative [Burkholderia pseudomallei 1710b] gi|254220060|gb|EET09444.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei 1710a] Length = 509 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 373 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 429 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507 >gi|83747658|ref|ZP_00944694.1| FlgA [Ralstonia solanacearum UW551] gi|207739741|ref|YP_002258134.1| flagella basal body p-ring formation protein [Ralstonia solanacearum IPO1609] gi|83725710|gb|EAP72852.1| FlgA [Ralstonia solanacearum UW551] gi|206593123|emb|CAQ60029.1| flagella basal body p-ring formation protein [Ralstonia solanacearum IPO1609] Length = 295 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P I G V+++ G +++ G AL+ A++G Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG G V V Sbjct: 270 VAQVR-TANGNVISGIAQSPGVVAV 293 >gi|254292904|ref|YP_003058927.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica ATCC 49814] gi|254041435|gb|ACT58230.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica ATCC 49814] Length = 249 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYVI 93 ++ G+V++ L + + +R ++K +VG +R + +S +H P +I Sbjct: 131 MSRGDVVSAEDLIWIPAPENRLRPTGTPNLKSNIVGKELKRSVRAQTAFRISDVHTPALI 190 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +G V + +G + +S G AL DA+ I V N + + V G RV+ Sbjct: 191 RKGDPVTLTYLKGALRLSVDGKALMDAAQDAPIRVLNNYSKRTIDAIVSGAGEARVL 247 >gi|167736698|ref|ZP_02409472.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 14] Length = 221 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 85 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 140 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 141 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 200 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 201 -MAAGQIVTAIVKDAATVEI 219 >gi|281412687|ref|YP_003346766.1| flagella basal body P-ring formation protein FlgA [Thermotoga naphthophila RKU-10] gi|281373790|gb|ADA67352.1| flagella basal body P-ring formation protein FlgA [Thermotoga naphthophila RKU-10] Length = 286 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 58/124 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E ++ + I G + +VVG ++RR L V+ + Sbjct: 159 NVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADM 218 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + P + +G V + G++ ++T L + +G+ + N+++ V G V Sbjct: 219 VKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPV 278 Query: 147 VRVV 150 +R++ Sbjct: 279 LRIL 282 >gi|146311242|ref|YP_001176316.1| flagellar basal body P-ring biosynthesis protein FlgA [Enterobacter sp. 638] gi|145318118|gb|ABP60265.1| SAF domain [Enterobacter sp. 638] Length = 219 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + I G VL + ++ + + I V+ R L P Sbjct: 89 VNVQATGNYVVAAQPIARGSVLQTTSVELKRGRLDQLPPRTMLDINQAQDSVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + + G +V +I ++++ G AL++A++ V+ + +G +VSG Sbjct: 149 QAIQLSMLRQAWRVKAGQRVMVIANGDGFSVNSEGQALNNAAVAQNARVR-MSSGQVVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVGSDGIILI 217 >gi|290474968|ref|YP_003467852.1| basal-body periplasmic P ring assembly protein [Xenorhabdus bovienii SS-2004] gi|289174285|emb|CBJ81075.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring [Xenorhabdus bovienii SS-2004] Length = 223 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 61/135 (45%), Gaps = 1/135 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 ++ V G ++ + I VL E + + + + K + + R + Sbjct: 90 FIQVYVGVTGSYLMSNRAIQRNTVLTEKDFQVKTGALDKLPNDIIRNRKVIQNGIAIRNI 149 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 I +++ RP+ I G V +I+ + + G A+++A+ D I V+ + +G + Sbjct: 150 PAGQFITRNMIRRPWAIRAGQNVVVIVDGHHFQVRYEGKAINNAASFDNIRVR-LASGQV 208 Query: 137 VSGSVVDTGTVRVVV 151 ++G + G+V++++ Sbjct: 209 ITGETQENGSVKMML 223 >gi|238028853|ref|YP_002913084.1| flagellar basal body P-ring formation protein FlgA [Burkholderia glumae BGR1] gi|237878047|gb|ACR30380.1| Flagellar basal body P-ring formation protein FlgA [Burkholderia glumae BGR1] Length = 510 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LY+ S V G+ V + + G+VL + L + + + VG Sbjct: 374 WTLYLQSKI----EVQGNYYVAAHALAPGDVLTAADLVAHEGDLTMLPLAVITDPAQAVG 429 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + +L ++ G VR++ +IS+ G +++A G + V+ Sbjct: 430 GTSLVRVAAGLPLRQDMLRSASSVTIGQTVRVVAAGQGFSISSEGSVMNNAGPGQQVRVR 489 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV V Sbjct: 490 -LAAGQIVTAVVKDGNTVEV 508 >gi|283784868|ref|YP_003364733.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168] gi|282948322|emb|CBG87905.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168] Length = 219 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + I G L + + + + I + V+ R L P Sbjct: 89 VNVQATGNYVVAAAPITRGSKLTPASIALKRGRLDQLPPRTILDINQIQEAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L++L + + I G +V ++ +++ G AL++A++ V+ + +G +VSG Sbjct: 149 QPVQLNMLRQDWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVR-MLSGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 IVDADGNILI 217 >gi|222100098|ref|YP_002534666.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359] gi|221572488|gb|ACM23300.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359] Length = 287 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 61/124 (49%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV IN G+V+ E + + I G +++ +VVG+V++R L V+ ++ Sbjct: 160 NVVVLKRNINVGDVIKEDFVTVEERDIFEINGEPFYNVSEVVGMVSKRYLRSGTVLTKNM 219 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L P + +G V + G++ +ST L + +G+ + N+++ V G V Sbjct: 220 LEHPPDVVKGQIVPAYVDLGSIKVSTFVEILENGHLGETVKAMNVESRKYVFGRVEKGPV 279 Query: 147 VRVV 150 +R++ Sbjct: 280 LRIL 283 >gi|226944488|ref|YP_002799561.1| flagellar protein FlgA [Azotobacter vinelandii DJ] gi|226719415|gb|ACO78586.1| Flagellar protein FlgA [Azotobacter vinelandii DJ] Length = 231 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 1/125 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 ++G + I GE + L + + N A + +++G+ R + Sbjct: 105 ILGEYAIARRAIEPGETVEADMLAMRRGRLERLPRNAAITTDEILGMQATRAIAEGSTFQ 164 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 S L P +I R A+V + IS AL ++ ++ V+ + G ++ G VV Sbjct: 165 RSALRAPELIERNAQVVLEARGPGFVISRKATALDSGALDSLVRVR-TEAGEILRGRVVG 223 Query: 144 TGTVR 148 ++ Sbjct: 224 RNRLQ 228 >gi|207728342|ref|YP_002256736.1| flagella basal body p-ring formation protein [Ralstonia solanacearum MolK2] gi|206591588|emb|CAQ57200.1| flagella basal body p-ring formation protein [Ralstonia solanacearum MolK2] Length = 295 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P I G V+++ G +++ G AL+ A++G Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG G V V Sbjct: 270 VAQVR-TANGNVISGIAQSPGVVAV 293 >gi|167917159|ref|ZP_02504250.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei BCC215] Length = 232 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 96 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 151 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 152 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 211 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 212 -MAAGQIVTAIVKDAATVEI 230 >gi|300311348|ref|YP_003775440.1| flagellar basal body P-ring formation protein [Herbaspirillum seropedicae SmR1] gi|300074133|gb|ADJ63532.1| flagellar basal body P-ring formation protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + VI ++ +V + G+ ++ S + ++ S + V+G Sbjct: 118 WTIYVRANV----QVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIG 173 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V L + + + V+ +G VR++ IST ALS+A+ G + + Sbjct: 174 RVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQAR 233 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 G +VSG G + + Sbjct: 234 -TAAGQVVSGIAKAGGILEI 252 >gi|89902473|ref|YP_524944.1| flageller protein FlgA [Rhodoferax ferrireducens T118] gi|89347210|gb|ABD71413.1| Flageller protein FlgA [Rhodoferax ferrireducens T118] Length = 246 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 5/148 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ + +++++ + G A V ++AG L + + E +V + R Sbjct: 101 LRCLEGSVKWNVFLPVTIKAY----GQAWVVKGQVSAGAALTQDDVMEAEVDWAEQREAI 156 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + +G V R L + ++ V GA++R+ + I++ G ALS Sbjct: 157 ISNPDQWLGQVANRALTSGQALRQGMIRPAEVFRAGAQIRVQVQGAGFEITSDGQALSAG 216 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +G VK ++ G ++SG V+D+ TVR Sbjct: 217 VVGQPARVK-MNNGHVMSGEVLDSRTVR 243 >gi|218549200|ref|YP_002382991.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia fergusonii ATCC 35469] gi|218356741|emb|CAQ89369.1| Flagella basal body P-ring formation protein flgA precursor [Escherichia fergusonii ATCC 35469] Length = 236 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + I G V+N S + + + + V ++ R + P Sbjct: 106 VNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPG 165 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L++L + + I G +V++I ++ G AL++A++ V+ + +G +VSG Sbjct: 166 QPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSG 224 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 225 IVGADGNILI 234 >gi|258404728|ref|YP_003197470.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium retbaense DSM 5692] gi|257796955|gb|ACV67892.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium retbaense DSM 5692] Length = 326 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 1/121 (0%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V ++ ++ S L+ S + VG R + V+ SVL Sbjct: 205 VTARRNLDRESIVQASDLRRESRQLSRLDDPVY-EASVAVGQRVVRSVRAGEVLDRSVLA 263 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++ RG V + +G + I+ +G+A D + + I V+N TG + G+VV TVR Sbjct: 264 APILVQRGKPVTLEAVRGALVITASGVAQEDGGLQETIRVENRRTGKEIFGTVVSADTVR 323 Query: 149 V 149 V Sbjct: 324 V 324 >gi|307546972|ref|YP_003899451.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas elongata DSM 2581] gi|307218996|emb|CBV44266.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas elongata DSM 2581] Length = 235 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 1/122 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SVIG + + + AGE + L + + +G V R L V+ Sbjct: 108 SVIGAYLETARDVAAGETITRDHLVIRHGNLARLPRQTLREAGQAIGRVAMRPLSEGQVL 167 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L +P ++ RG V + ++ AL+ GD I V+ +D ++ VV Sbjct: 168 RGYQLRKPRLVQRGEAVTLEARGSGFRVTRPAEALAPGGRGDRIRVR-LDNREILHARVV 226 Query: 143 DT 144 Sbjct: 227 GE 228 >gi|159045793|ref|YP_001534587.1| flagellar basal body P-ring biosynthesis protein FlgA [Dinoroseobacter shibae DFL 12] gi|157913553|gb|ABV94986.1| flagellar basal body P-ring biosynthesis protein FlgA [Dinoroseobacter shibae DFL 12] Length = 141 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R+L+ SL VL A +V + I A +L L + Sbjct: 3 RWLIL-SLAVLMGVPAAAE----TLVAARTIRAQAILTAEDLNLTPGSTP----GALSRP 53 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 ++ +GL +R +L I + P ++ R V ++ M I+T G AL A +G+ Sbjct: 54 EEAIGLESRVILYAGRPILADQVGPPALVERNELVSLVYATPFMRIATEGRALGRAGLGE 113 Query: 125 VIAVKNIDTGVMVSGSVVDTGT 146 + V NI + V V G Sbjct: 114 SLRVLNISSKTTVRARVTGPGQ 135 >gi|167892405|ref|ZP_02479807.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 7894] Length = 220 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 84 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 139 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 140 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 199 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 200 -MAAGQIVTAIVKDAATVEI 218 >gi|167813796|ref|ZP_02445476.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 91] Length = 211 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 75 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 130 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 131 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 190 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 191 -MAAGQIVTAIVKDAATVEI 209 >gi|52427983|gb|AAU48576.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei ATCC 23344] Length = 251 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 115 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 170 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 171 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 230 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 231 -MAAGQIVTAIVKDAATVEI 249 >gi|58039416|ref|YP_191380.1| flagellar basal body P-ring biosynthesis protein FlgA [Gluconobacter oxydans 621H] gi|58001830|gb|AAW60724.1| Flagella basal body P ring formation protein FlgA [Gluconobacter oxydans 621H] Length = 330 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 57/124 (45%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AV ++ G+ + + V I + S +D VGL R VL V+ +S Sbjct: 185 RAVTLRHAMHLGQPILPEDVTMTFVRIGLIPDDALQSPEDAVGLEARGVLAAGQVLSVSE 244 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L P ++ RG+ V + ++ ++ +G L GD + V N + ++++G VVD Sbjct: 245 LAHPQLVHRGSPVVATFSGPSLHLTVSGTVLEAGGKGDTVHVYNASSRMVLTGRVVDRTE 304 Query: 147 VRVV 150 V V+ Sbjct: 305 VEVI 308 >gi|291613034|ref|YP_003523191.1| flagella basal body P-ring formation protein FlgA [Sideroxydans lithotrophicus ES-1] gi|291583146|gb|ADE10804.1| flagella basal body P-ring formation protein FlgA [Sideroxydans lithotrophicus ES-1] Length = 238 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 7/140 (5%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +S++V + V +V S + VL+ S + + + +G Sbjct: 103 WSIFVQADI----KVTVDMLVASRPLAQNTVLSASDFRLQNGELG--QPGILIDPQQAIG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + V+ +L PYV+ +G + + +S G AL++ + G + V+ Sbjct: 157 KTLRFPIGAGQVLRQDMLRAPYVVIQGKTTSVRVKDTGFYVSATGQALNNGAEGQNVQVR 216 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + +G +V G+ G+V V Sbjct: 217 -MYSGQVVIGTAAADGSVEV 235 >gi|167567650|ref|ZP_02360566.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia oklahomensis EO147] Length = 225 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I+ GE L+ + L + + + VG Sbjct: 89 WTIYLQAK----LAVQATYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 144 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 145 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 204 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 205 -MAAGQIVTAIVKDAATVEI 223 >gi|322832560|ref|YP_004212587.1| flagella basal body P-ring formation protein FlgA [Rahnella sp. Y9602] gi|321167761|gb|ADW73460.1| flagella basal body P-ring formation protein FlgA [Rahnella sp. Y9602] Length = 260 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 1/129 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G V + + AG L ++ +++ + + V +T R + + Sbjct: 133 QVSGTYWVAAKNVPAGAHLTQTDMQQKTGRLDLLPPKTILDSQQAVNGITLRNISIGQPL 192 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 LS+L RP+++ G +V++ T +S+AG A+++A+ + + ++ + +G +V+G+V Sbjct: 193 TLSMLRRPWMVHAGQEVQVQATGSGFNVSSAGKAMNNAAANESVRIR-MPSGAIVNGTVG 251 Query: 143 DTGTVRVVV 151 G+V V + Sbjct: 252 SDGSVTVTI 260 >gi|260597441|ref|YP_003210012.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter turicensis z3032] gi|260216618|emb|CBA29909.1| Flagella basal body P-ring formation protein flgA [Cronobacter turicensis z3032] Length = 201 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV S + G LNES L+ + + N ++ VT R L P+ Sbjct: 71 VNVQAFGNYVVASQPVARGGTLNESNLRLERGRLDLLPPNAMLNLDQAREAVTLRDLAPN 130 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + LS++ + + + G +V+II +I+ G AL++A++ V+ + +G +VSG Sbjct: 131 QPVMLSMVRQSWRVKAGQQVQIIANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSG 189 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 190 IVGSDGIILI 199 >gi|170747257|ref|YP_001753517.1| flagella basal body P-ring formation protein FlgA [Methylobacterium radiotolerans JCM 2831] gi|170653779|gb|ACB22834.1| flagella basal body P-ring formation protein FlgA [Methylobacterium radiotolerans JCM 2831] Length = 379 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 60/125 (48%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + V + +N GE + E + Q ++ + S+ ++G V + L+ V+ + Sbjct: 234 LREVAVLTRNLNRGEPVKEGDVALEQRPRDSVAPDAQGSVTTILGEVAQNTLMAGTVLRV 293 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + P +++RG V I+ ++++S G++ +G V+ V N+ + ++ +V+ Sbjct: 294 TDTAPPELVARGETVTIVYETPSISLSMRGLSNDSGRMGAVVNVINVASKKILQATVIGP 353 Query: 145 GTVRV 149 G V V Sbjct: 354 GRVSV 358 >gi|291085566|ref|ZP_06353375.2| flagella basal body P-ring formation protein FlgA [Citrobacter youngae ATCC 29220] gi|291071317|gb|EFE09426.1| flagella basal body P-ring formation protein FlgA [Citrobacter youngae ATCC 29220] Length = 267 Score = 90.7 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + + G L + + + + + V V+ R L+P Sbjct: 137 VNVQATGNYVVAAAPVARGSALTPASVTLKRGRLDQLPPRAVLDLNQVQDAVSLRDLVPG 196 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + I G +V +I ++ G AL++A++ V+ + +G +VSG Sbjct: 197 QPIQLSMLRQAWRIKAGQRVLVIANGEGFRVNAEGKALNNAAVAQNARVR-MISGQVVSG 255 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 256 VVDSDGNILI 265 >gi|167574682|ref|ZP_02367556.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia oklahomensis C6786] Length = 229 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I+ GE L+ + L + + + VG Sbjct: 93 WTIYLQAK----LAVQATYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 148 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 149 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 208 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 209 -MAAGQIVTAIVKDAATVEI 227 >gi|67641534|ref|ZP_00440311.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei GB8 horse 4] gi|121598829|ref|YP_994286.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia mallei SAVP1] gi|124385761|ref|YP_001028065.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia mallei NCTC 10229] gi|161579515|ref|YP_104793.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia mallei ATCC 23344] gi|167001531|ref|ZP_02267326.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei PRL-20] gi|121227639|gb|ABM50157.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei SAVP1] gi|238522484|gb|EEP85928.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei GB8 horse 4] gi|243062733|gb|EES44919.1| flagella basal body P-ring formation protein FlgA [Burkholderia mallei PRL-20] Length = 254 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 174 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252 >gi|161723214|ref|YP_106896.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei K96243] Length = 254 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 174 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252 >gi|226199833|ref|ZP_03795384.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei Pakistan 9] gi|225928184|gb|EEH24220.1| flagellar basal body P-ring formation protein FlgA [Burkholderia pseudomallei Pakistan 9] Length = 295 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 159 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 214 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 215 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 274 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 275 -MAAGQIVTAIVKDAATVEI 293 >gi|253996323|ref|YP_003048387.1| flagella basal body P-ring formation protein FlgA [Methylotenera mobilis JLW8] gi|253983002|gb|ACT47860.1| flagella basal body P-ring formation protein FlgA [Methylotenera mobilis JLW8] Length = 265 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 5/142 (3%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +++Y + + V+ +V +V + G V+ L + + + Sbjct: 128 AWTIYAQATVN----VVAQYLVAAVPLAQGRVVTADDLLFQSGDLTQLPAGIFTDLAQAQ 183 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G + + V+ +L V+ +G V + + +S G A++ A+ G V+ V Sbjct: 184 GRIVNISMTAGTVLRQEMLKVSPVVQQGQTVMVTSSGKGFRVSAEGKAMTKANEGQVVQV 243 Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150 K + +G +VSG G V VV Sbjct: 244 K-VASGQVVSGIARQGGQVEVV 264 >gi|300696909|ref|YP_003747570.1| assembly protein for flagellar basal-body periplasmic P ring [Ralstonia solanacearum CFBP2957] gi|299073633|emb|CBJ53153.1| assembly protein for flagellar basal-body periplasmic P ring [Ralstonia solanacearum CFBP2957] Length = 295 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P I G V+++ G +++ G AL+ A++G Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG TG V V Sbjct: 270 VAQVR-TANGNVISGIAQSTGVVAV 293 >gi|52208324|emb|CAH34257.1| putative flagella basal body P-ring formation protein [Burkholderia pseudomallei K96243] Length = 307 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 171 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 226 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 227 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 286 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 287 -MAAGQIVTAIVKDAATVEI 305 >gi|17548562|ref|NP_521902.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia solanacearum GMI1000] gi|17430810|emb|CAD17492.1| putative flagella basal body p-ring formation protein [Ralstonia solanacearum GMI1000] Length = 295 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVILQP 209 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P + G V+++ G +++ G AL+ A++G Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVTSDGRALNQAAVGQ 269 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG G V V Sbjct: 270 VAQVR-TANGNVISGIAQSAGVVAV 293 >gi|157146230|ref|YP_001453549.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter koseri ATCC BAA-895] gi|157083435|gb|ABV13113.1| hypothetical protein CKO_01987 [Citrobacter koseri ATCC BAA-895] Length = 219 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + + G L + + + + I + V+ R L+P Sbjct: 89 VNVQATGNYVVAAAPVARGGALGPANITLKRGRLDQLPPRTVLDINQIQDAVSLRDLVPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + I G +V ++ +++ G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLSMLRQAWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVR-MLSGQVVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDPDGNILI 217 >gi|310816832|ref|YP_003964796.1| flagella basal body P-ring formation protein FlgA [Ketogulonicigenium vulgare Y25] gi|308755567|gb|ADO43496.1| flagella basal body P-ring formation protein FlgA [Ketogulonicigenium vulgare Y25] Length = 138 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 4/129 (3%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 + VV + A ++ L +++GL R + Sbjct: 13 GTAQADYVVAQRNLPANGIITADLLGLRPGEVP----GAITDPSEIIGLEARTPIYAGRP 68 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + S +P ++ R + + T+G +TI G AL A GD+I V N+ + + + Sbjct: 69 LQASQFGQPAIVQRNQVIAMQFTRGALTIMAEGRALERAGPGDLIRVMNLQSRTTIMARI 128 Query: 142 VDTGTVRVV 150 GT V Sbjct: 129 GVEGTAYVT 137 >gi|85706166|ref|ZP_01037261.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] gi|85669330|gb|EAQ24196.1| putative flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] Length = 139 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 9/140 (6%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVG 69 L + + + VV + I A EVL + L G + D++G Sbjct: 5 LTSFLMLIIANPALADMVVATRTIRAQEVLGPADLLLK-------PGEGISDVTLHDLIG 57 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R L P I + P VI R V ++ + I T G +LS A +GD + V Sbjct: 58 QEVRVALYPGRQIRAVDVGPPTVIERNQIVPLVYAHSGLRIETEGRSLSRAGVGDYVRVM 117 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ + VSG V TG + V Sbjct: 118 NLASRATVSGRVTQTGHILV 137 >gi|309779443|ref|ZP_07674204.1| flagella basal body p-ring formation protein [Ralstonia sp. 5_7_47FAA] gi|308921684|gb|EFP67320.1| flagella basal body p-ring formation protein [Ralstonia sp. 5_7_47FAA] Length = 268 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V S ++ G+ L+ L+ S + + Sbjct: 127 RSPHAWAAWVPATI----QITGTYYVASHQLSPGKTLDLGDLEARTGDLSTLPASVVQQP 182 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 DVVG V + + + L P + G V++I G +S+ G AL+ A++G Sbjct: 183 ADVVGHVLLTSVAANQPLRAESLRLPMAVQAGQTVKLIAEGGGFQVSSDGRALNQAAVGQ 242 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G +VSG G V + Sbjct: 243 VAQVR-TANGNVVSGIAQSAGVVAI 266 >gi|237653587|ref|YP_002889901.1| flagella basal body P-ring formation protein FlgA [Thauera sp. MZ1T] gi|237624834|gb|ACR01524.1| flagella basal body P-ring formation protein FlgA [Thauera sp. MZ1T] Length = 242 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 64/142 (45%), Gaps = 5/142 (3%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + ++ Y+ + +V+ ++ + + AG+VL + L + + + + N Sbjct: 102 SPVTWTAYLQARV----AVVADYLIAARPLRAGQVLGPADLGQRRGDLTALPDNLLTDPT 157 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 G TR + + +L P+ + +G V ++ +++ G A+++A+ G+ Sbjct: 158 QASGHHTRIAVAAGSPLRGDMLRVPHAVRQGQTVSVLGVGAGFRVASEGRAMNNAAPGEK 217 Query: 126 IAVKNIDTGVMVSGSVVDTGTV 147 + V+ + G +V+G+ G V Sbjct: 218 VRVR-LADGQVVTGTAQAGGAV 238 >gi|85058007|ref|YP_453709.1| flagellar basal body P-ring formation protein FlgA [Sodalis glossinidius str. 'morsitans'] gi|84778527|dbj|BAE73304.1| flagellar basal body P-ring formation protein FlgA [Sodalis glossinidius str. 'morsitans'] Length = 238 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 1/128 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + S G V + + +G L + + N + + V G +T R + Sbjct: 97 IKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAG 156 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + ++L P+ + +G V ++ + G A+SDA++GD + V+ + +G MVSG Sbjct: 157 QPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVR-LASGQMVSG 215 Query: 140 SVVDTGTV 147 +V + G V Sbjct: 216 AVDNQGVV 223 >gi|300693333|ref|YP_003749306.1| flagella basal body p-ring formation protein [Ralstonia solanacearum PSI07] gi|299075370|emb|CBJ34665.1| flagella basal body p-ring formation protein [Ralstonia solanacearum PSI07] Length = 293 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 152 RSPHAWAAWVPATI----QISGTYYVAARQLPPGKTLDMGDLEARTGDLSILPASVVQQP 207 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P + G V+++ G +++ G AL+ A++G Sbjct: 208 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQ 267 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG G V V Sbjct: 268 VAQVR-TANGNVISGIAQSVGVVAV 291 >gi|167645395|ref|YP_001683058.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp. K31] gi|167347825|gb|ABZ70560.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp. K31] Length = 247 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + + AGE++ L ++V S + D++G+ +R L L + P Sbjct: 112 ARSLAAGEIVQPEDLVWVKVAAS--PSDSPRDADDLIGMTAKRPLRQGATASLRDVSTPQ 169 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 VI G V + G + +S G A+++ ++G+ + V+N + ++ V G+ V Sbjct: 170 VIKAGDIVAVTYEDGGVALSLQGKAMANGAVGESLMVQNTASKKIIETVVTGPGSTAV 227 >gi|312968855|ref|ZP_07783062.1| flagella basal body P-ring formation protein flgA [Escherichia coli 2362-75] gi|312286257|gb|EFR14170.1| flagella basal body P-ring formation protein flgA [Escherichia coli 2362-75] Length = 192 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 62 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 121 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 122 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 180 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 181 VVDADGNILI 190 >gi|167909120|ref|ZP_02496211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 112] Length = 214 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 78 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 133 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 134 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 193 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 194 -MAAGQIVTAIVKDAATVEI 212 >gi|195952533|ref|YP_002120823.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum sp. Y04AAS1] gi|195932145|gb|ACG56845.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum sp. Y04AAS1] Length = 235 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V +I G+++ + +K + N S + V+G + + I S+ Sbjct: 107 PVIVAKKLITRGQIITKDDIKSAVKYIRFVPQNLVVSKRQVIGATALQNIGIGEPIRTSM 166 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM-VSGSVVDTG 145 + +I G VR+I G + I+T A+ + +G + ++ + + G V+D Sbjct: 167 ISMVPIIRYGDIVRVIYDNGYIRITTKAKAMQNGYLGKFVRLQPLGNQKTFIVGKVIDKD 226 Query: 146 TVRV 149 TV + Sbjct: 227 TVLI 230 >gi|237731003|ref|ZP_04561484.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter sp. 30_2] gi|226906542|gb|EEH92460.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter sp. 30_2] Length = 219 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + + G L + + + + + V V+ R L+P Sbjct: 89 VNVQATGNYVVAAASVARGSTLTPASVTLKRGRLDQLPPRAVLDMSQVQDAVSLRDLVPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I LS+L + + I G +V +I ++ G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLSMLRQAWRIKAGQRVLVIANGDGFRVNAEGKALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDSDGNILI 217 >gi|299068728|emb|CBJ39967.1| assembly protein for flagellar basal-body periplasmic P ring [Ralstonia solanacearum CMR15] Length = 295 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V + + G+ L+ L+ S + + Sbjct: 154 RSPHAWAAWVPATI----QISGTYYVAAHQLPPGKTLDMGDLEARTGDLSALPPSVVLQP 209 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 D VG V L P+ + L P + G V+++ G +S+ G AL+ A++G Sbjct: 210 ADAVGRVLLTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVSSDGRALNQAAVGQ 269 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G ++SG G V V Sbjct: 270 VAQVR-TANGNVISGIAQSAGVVAV 293 >gi|331646330|ref|ZP_08347433.1| flagella basal body P-ring formation protein FlgA [Escherichia coli M605] gi|281178181|dbj|BAI54511.1| flagellar basal body P-ring protein FlgA precursor [Escherichia coli SE15] gi|330910886|gb|EGH39396.1| flagellar basal-body P-ring formation protein FlgA [Escherichia coli AA86] gi|331045082|gb|EGI17209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli M605] Length = 219 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|215486281|ref|YP_002328712.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O127:H6 str. E2348/69] gi|218689025|ref|YP_002397237.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli ED1a] gi|215264353|emb|CAS08710.1| assembly protein for flagellar basal-bodyperiplasmic P ring [Escherichia coli O127:H6 str. E2348/69] gi|218426589|emb|CAR07417.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli ED1a] gi|320196446|gb|EFW71069.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia coli WV_060327] Length = 219 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|254460877|ref|ZP_05074293.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium HTCC2083] gi|206677466|gb|EDZ41953.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae bacterium HTCC2083] Length = 141 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 4/143 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 ++ + + L A + + + I GEV++ + + ++ S S Sbjct: 1 MILRAFPIALLLITSAPISAEVAIAARNIRPGEVMSVTDVMVIRGEAS----GAFKSADL 56 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +VG + L VI S + + R V I + +++ST G AL S G I Sbjct: 57 IVGAEAKVALYAGRVILTSQIVPAASVQRNQIVEIRFSSNGLSMSTDGRALGRGSAGQRI 116 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V N+ + + G++ G+VRV Sbjct: 117 RVMNLASKTSIFGTIQSDGSVRV 139 >gi|32490786|ref|NP_871040.1| hypothetical protein WGLp037 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165992|dbj|BAC24183.1| flgA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 225 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 1/121 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 +F V S +I +G +++E +K + NI N S + + G ++ + Sbjct: 94 IFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTKNIPQNIILSNQKISGKISTISIGIG 153 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I S+L P++I +G KV +I TI GI++ + +I D++ VK + +G + G Sbjct: 154 QPITTSMLKSPWIIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKIFQG 212 Query: 140 S 140 Sbjct: 213 V 213 >gi|110641248|ref|YP_668978.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli 536] gi|191172461|ref|ZP_03034002.1| flagella basal body P-ring formation protein FlgA [Escherichia coli F11] gi|300982625|ref|ZP_07176209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 200-1] gi|306814079|ref|ZP_07448252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli NC101] gi|110342840|gb|ABG69077.1| flagella basal body P-ring formation protein FlgA precursor [Escherichia coli 536] gi|190907345|gb|EDV66943.1| flagella basal body P-ring formation protein FlgA [Escherichia coli F11] gi|300307090|gb|EFJ61610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 200-1] gi|305852716|gb|EFM53164.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli NC101] gi|324013346|gb|EGB82565.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 60-1] Length = 219 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|167717655|ref|ZP_02400891.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei DM98] Length = 184 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 48 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARNGDLTLLPLAVITDAQQAVG 103 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 104 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 163 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 164 -MAAGQIVTAIVKDAATVEI 182 >gi|162210065|ref|YP_331875.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia pseudomallei 1710b] Length = 254 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + +V V + I GE L + L + + + VG Sbjct: 118 WTIYLQAK----LAVQATYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + +L +S G VR++ + TIS G L++A+ G + V+ Sbjct: 174 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + G +V+ V D TV + Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252 >gi|91210224|ref|YP_540210.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli UTI89] gi|117623258|ref|YP_852171.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli APEC O1] gi|218557954|ref|YP_002390867.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli S88] gi|237706942|ref|ZP_04537423.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia sp. 3_2_53FAA] gi|91071798|gb|ABE06679.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring [Escherichia coli UTI89] gi|115512382|gb|ABJ00457.1| FlgA [Escherichia coli APEC O1] gi|218364723|emb|CAR02413.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli S88] gi|226898152|gb|EEH84411.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia sp. 3_2_53FAA] gi|294490364|gb|ADE89120.1| flagella basal body P-ring formation protein FlgA [Escherichia coli IHE3034] gi|307627458|gb|ADN71762.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli UM146] gi|315287373|gb|EFU46784.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 110-3] gi|323953242|gb|EGB49108.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H252] gi|323957896|gb|EGB53608.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H263] Length = 219 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|221639445|ref|YP_002525707.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides KD131] gi|221160226|gb|ACM01206.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides KD131] Length = 220 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 8/117 (6%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G V+ L ++ D++G + L P + L ++ Sbjct: 107 RPLARGSVIAAEDLASGPLSTRWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 158 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++RG V + + G + + AL D ++GD++ V+N+ +G ++ +V V Sbjct: 159 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGAILRATVTARNLAEV 215 >gi|157363240|ref|YP_001470007.1| SAF domain-containing protein [Thermotoga lettingae TMO] gi|157313844|gb|ABV32943.1| SAF domain protein [Thermotoga lettingae TMO] Length = 219 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 65/146 (44%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 ++F S S S ++ I +GE++ ++ ++ +GN+ ++ Sbjct: 71 IKFYNNRSFAGYVQASALISQPRKILIARRTIKSGEIIKREDVELVEFDVFGKKGNFTNN 130 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 ++ V G V+R++ I L L + + G + + G++ + L D + G Sbjct: 131 LEVVAGKVSRKMFREGEPIDLFYLVKAPDVRAGQVLLAVFETGSVLATALVRVLHDGNFG 190 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 +++ +N+DTG ++ G + T+ + Sbjct: 191 EIVKARNVDTGFLIQGILRSDYTILI 216 >gi|226939515|ref|YP_002794588.1| flagella basal body P-ring formation protein FlgA [Laribacter hongkongensis HLHK9] gi|226714441|gb|ACO73579.1| probable flagella basal body P-ring formation protein FlgA [Laribacter hongkongensis HLHK9] Length = 224 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + AG V+ ++ N I+DVVG R + + +L P + Sbjct: 107 RPLEAGAVITAEDIRLEPSRNGRAPAGSFTRIEDVVGKSLGRGVGTGVTLRREMLASPLL 166 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + + +V++ ++ G+AL++ S G+VI V+ + G + G V G+++ Sbjct: 167 VRQNERVKVQAIGPAFSVWADGVALTNGSEGEVIGVR-MPGGRTIQGVVAADGSIQ 221 >gi|315296703|gb|EFU55998.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 16-3] Length = 219 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPCTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|220903672|ref|YP_002478984.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867971|gb|ACL48306.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 416 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 12/146 (8%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG---NYAHS 63 + + + SL+ +V + +N G+ L+ + M+V +R + Sbjct: 279 TVLRRVAGTATLSLWLTVPT----AAQSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGG 334 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 +V R + I S L ++ RG V +I ++GN+ I+T AL+D G Sbjct: 335 PWQLV-----RAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPG 389 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149 I V+N+ T V G V + TV + Sbjct: 390 ATIPVRNLQTKKQVFGIVKNGNTVEI 415 >gi|187926958|ref|YP_001893303.1| flagella basal body P-ring formation protein FlgA [Ralstonia pickettii 12J] gi|241665287|ref|YP_002983646.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia pickettii 12D] gi|187728712|gb|ACD29876.1| flagella basal body P-ring formation protein FlgA [Ralstonia pickettii 12J] gi|240867314|gb|ACS64974.1| flagella basal body P-ring formation protein FlgA [Ralstonia pickettii 12D] Length = 291 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 5/145 (3%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R ++ +V + + G V S ++ G+ L+ L+ S + + Sbjct: 150 RSPHAWAAWVPATI----QITGTYYVASHQLSPGKTLDMGDLEARTGDLSMLPPSVVQQP 205 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 DVVG V + + + L P + G V+++ G +++ G AL+ A++G Sbjct: 206 ADVVGRVLVTSVAANQPLRAESLRLPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQ 265 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149 V V+ G +VSG G V + Sbjct: 266 VAQVR-TANGNVVSGIAQSVGVVAI 289 >gi|194445224|ref|YP_002040427.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403887|gb|ACF64109.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 219 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + +++ G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWLVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|30248318|ref|NP_840388.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas europaea ATCC 19718] gi|30138204|emb|CAD84212.1| putative flagella basal body P-ring formation protein [Nitrosomonas europaea ATCC 19718] Length = 230 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LYV VI V + ++ G+ L + + I G A V+G Sbjct: 94 WTLYVPVEI----EVITRVVHAAQPVSMGKQLEAQDIVSKEADLVRIPGEVATDPDQVIG 149 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 V L I L P+VISRG KVR+ T +S G AL+ A+ G+V+ V+ Sbjct: 150 KVATTFLASGQPIRTHQLRAPHVISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVR 209 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N TG ++ G G V + Sbjct: 210 N-HTGRIIRGIARAGGVVEI 228 >gi|289523331|ref|ZP_06440185.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503023|gb|EFD24187.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 305 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 43/90 (47%) Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 G+ ++G + L I L + Y++ RG +VR+ + G +++ T AL Sbjct: 209 GDIPQYADAILGKKLKTNLEAGSPIYLHDVEPLYLVKRGDRVRLYVNSGMISVETVAKAL 268 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++GD+I V N+D+ +S V G V Sbjct: 269 DSGALGDIIRVINLDSRRTISAKVAGKGAV 298 >gi|114797541|ref|YP_758988.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas neptunium ATCC 15444] gi|114737715|gb|ABI75840.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas neptunium ATCC 15444] Length = 135 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 7/139 (5%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 L+ L + A +++ S VI AG+++ V S G+ A + V+ Sbjct: 1 MSVLFALGFTAFVALTDASSMIASEVIRAGDIVTP-------VNASAETGDVASMEEPVI 53 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G +R + + + +++R V + G + IST G A+ +AS+ + + V Sbjct: 54 GREAKRTIYAGQPVTMDNTRPARLVTRNQIVTVKYIHGGLEISTTGRAMGEASLNEPVTV 113 Query: 129 KNIDTGVMVSGSVVDTGTV 147 N+++ MV G V ++G V Sbjct: 114 LNLESRQMVQGIVQESGWV 132 >gi|1857440|gb|AAC45658.1| FlgA [Proteus mirabilis] Length = 218 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 G +V IN +V+ S +K ++ + + + + R + I Sbjct: 93 YGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHIATGKPITS 152 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 +++ RP+ I G V + + I G A+++A + I ++ + +G +++G ++ Sbjct: 153 TMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQIITGEALEN 211 Query: 145 GTVRV 149 G+VR+ Sbjct: 212 GSVRI 216 >gi|85715051|ref|ZP_01046036.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A] gi|85698248|gb|EAQ36120.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A] Length = 362 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + ++ +L S + + + + + A VVG+ TRR + + + L Sbjct: 206 AAVLARDVDRHTLLKFSDVVMERRPKAEVGRDAASH-DHVVGMQTRRQMRAGQALHGADL 264 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 RP ++ R V +I + ++ G A + GDV++V N+ + VSG VV G V Sbjct: 265 TRPDLVQRDEAVTLIYQAAGIYLTVRGKATEAGTEGDVVSVLNLQSKRTVSGVVVGRGQV 324 Query: 148 RV 149 V Sbjct: 325 SV 326 >gi|304321134|ref|YP_003854777.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis HTCC2503] gi|303300036|gb|ADM09635.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis HTCC2503] Length = 125 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 52/114 (45%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 GEV +RL V + + + + +VG R + P I S ++ R + Sbjct: 12 GEVHANARLPAGTVIDGSGLAGNENDVDRLVGRQLTRTIFPGRTISFSDTKEADLVDRNS 71 Query: 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 VRI+ +G M I T G AL + G+ I V N+++ ++ + G VRV + Sbjct: 72 TVRIVAVKGPMRIETKGRALGAGAEGEEILVMNLESRRTITAVISGPGEVRVEL 125 >gi|68164554|gb|AAY87283.1| predicted flagellar basal body P-ring biosynthesis protein [uncultured bacterium BAC17H8] Length = 276 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 1/125 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V + ++ +++ L + V+ N G + DV G + L + L Sbjct: 152 VVALARSVSRNDMIAREDLIMVPVSARNAFGAFF-DPADVAGRRLKMGLSARKPLMARHL 210 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + Y++ G +V I + G ++I+ G AL + I + I V+N +G + + V Sbjct: 211 YPDYLVEEGNEVLITSSSGGISINMVGYALENGQISEWIGVENASSGKTIRAKITGEKKV 270 Query: 148 RVVVK 152 V+ K Sbjct: 271 TVIAK 275 >gi|119384848|ref|YP_915904.1| flagellar basal body P-ring biosynthesis protein FlgA [Paracoccus denitrificans PD1222] gi|119374615|gb|ABL70208.1| SAF domain [Paracoccus denitrificans PD1222] Length = 138 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 5/126 (3%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + +VV + + AG V+ + + + + I VVG R ++ I Sbjct: 15 AMAGSVVANRTLPAGTVIAAGDVSLV-----DDQPGGVEDIAQVVGQQLRVMVYQGRRID 69 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 S L P ++ R V I + + I G ALS S G +I V N + V VSG V Sbjct: 70 PSTLTAPTLVGRNQIVTIAYEKATLRIEAEGRALSAGSAGQIIRVMNNASRVTVSGRVAP 129 Query: 144 TGTVRV 149 GTV V Sbjct: 130 DGTVIV 135 >gi|260222463|emb|CBA32052.1| hypothetical protein Csp_D30190 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 245 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 5/149 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 M CV + +++ + +G A V +N+G ++ES + +V + + Sbjct: 100 MRCVDGISRWNVTLPVTV----RAMGEAWVVRNQVNSGANISESDVTRGEVDWAEEQSPV 155 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 +G R L + ++ V GA V+I+ IS+ ALS Sbjct: 156 LADKTAWLGQTASRTLTTGQAMRQGMVRPAQVFQAGASVKIVAQGPGFQISSEAQALSAG 215 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 IG V+ +D G + SG+V+D TV++ Sbjct: 216 VIGQQARVR-MDNGRVASGTVLDMRTVKI 243 >gi|161503739|ref|YP_001570851.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865086|gb|ABX21709.1| hypothetical protein SARI_01824 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 267 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + ++ R L P Sbjct: 137 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAISLRDLAPG 196 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 197 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 255 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 256 TVDPDGNILI 265 >gi|302878272|ref|YP_003846836.1| flagella basal body P-ring formation protein FlgA [Gallionella capsiferriformans ES-2] gi|302581061|gb|ADL55072.1| flagella basal body P-ring formation protein FlgA [Gallionella capsiferriformans ES-2] Length = 225 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 3/134 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 +L + + +V + + G+++ E+ L +Q + G +VG V R Sbjct: 93 TLIPVQIKITRELLVSAHALTLGQIVRETDLARLQTETTLNSG--ITDASLIVGKVLRYS 150 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + +++ +L PY I +G V + + T+S++G+AL++AS G+ + + +G Sbjct: 151 VAAGYILREDMLRPPYSIKQGQTVNLSIQANGFTLSSSGVALNNASEGETVQAR-TSSGR 209 Query: 136 MVSGSVVDTGTVRV 149 ++SG+ G + + Sbjct: 210 VISGTASADGVILI 223 >gi|114762165|ref|ZP_01441633.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca bermudensis HTCC2601] gi|114545189|gb|EAU48192.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. HTCC2601] Length = 138 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + A +++ ++ ++DV+G R L P + + Sbjct: 19 VVATRTVRAQDIVPADAVRLESADVP----GAHVVLEDVIGQEARVTLYPGRAVMRGAVG 74 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P ++ R V +I + + I T G AL A G+ + V N+ + + G+V +GTV Sbjct: 75 APALVERNQIVELIFARNGLHIVTEGRALDRAGAGERVRVMNLSSRSTLFGTVTASGTVS 134 Query: 149 VV 150 V+ Sbjct: 135 VL 136 >gi|218700425|ref|YP_002408054.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli IAI39] gi|218370411|emb|CAR18218.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli IAI39] Length = 219 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R + PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDISPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + TG +VSG Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVTGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|226327750|ref|ZP_03803268.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198] gi|225203454|gb|EEG85808.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198] Length = 218 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SV G +V IN + + + + + + + + R + Sbjct: 85 FIQVDVSVTGKYLVAKKDINRDDAIETASVSMITGELEKQPYDVLRDPTLIKNAIAMRQI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 I +++ RP+ I G V + + I G A+++A + I V+ + +G + Sbjct: 145 SAGKPITSTMIRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANETIRVR-VKSGQI 203 Query: 137 VSGSVVDTGTVRV 149 V G ++ G+VR+ Sbjct: 204 VIGEALENGSVRI 216 >gi|16764529|ref|NP_460144.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994036|ref|ZP_02575128.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234098|ref|ZP_02659156.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244771|ref|ZP_02669703.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168467124|ref|ZP_02700966.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194447951|ref|YP_002045172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472156|ref|ZP_03078140.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197263841|ref|ZP_03163915.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|224584323|ref|YP_002638121.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|729518|sp|P40131|FLGA_SALTY RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|505360|dbj|BAA04977.1| FlgA protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419690|gb|AAL20103.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406255|gb|ACF66474.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458520|gb|EDX47359.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195630342|gb|EDX48968.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242096|gb|EDY24716.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328041|gb|EDZ14805.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331936|gb|EDZ18700.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336444|gb|EDZ23208.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|224468850|gb|ACN46680.1| flagellar basal body P-ring biosynthesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246384|emb|CBG24193.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992946|gb|ACY87831.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157714|emb|CBW17206.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912160|dbj|BAJ36134.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223791|gb|EFX48854.1| Flagellar basal-body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129443|gb|ADX16873.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988064|gb|AEF07047.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 219 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + I G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|296103615|ref|YP_003613761.1| Flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058074|gb|ADF62812.1| Flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 232 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 + S G V S + G ++ S ++ + + G + +++G R + Sbjct: 99 PVRISAQGTWWVASQSLPGGAIVQRSDIEPVTGNLDHQPGGLIFNADEIIGQRLTRAIDA 158 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 + + L + + + G V ++ T I + G AL++A++ DV+ VK + G VS Sbjct: 159 GKPLLENQLRQQWRLRAGQTVDLVTTGAGFRIRSQGKALNNAAVDDVLKVKTVG-GRTVS 217 Query: 139 GSVVDTGTVRVVVK 152 G V G V ++ + Sbjct: 218 GKVGADGQVMIISQ 231 >gi|242278485|ref|YP_002990614.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio salexigens DSM 2638] gi|242121379|gb|ACS79075.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio salexigens DSM 2638] Length = 334 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 2/131 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 SLF + P IN E++ + +++ + + Sbjct: 205 SLFVDLWKPVPCPVRPINRKELVTPDLITWKSKNMAHLGNQVWDGKGGP--WRVKVPVGT 262 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 I S + VI+RG KV ++ N+ ++ AL DA +G I V+N+ + V Sbjct: 263 GQPIMRSSIEPAPVIARGDKVTLMFRGKNLKLTVPVEALEDAGVGQNITVRNLQSKRKVV 322 Query: 139 GSVVDTGTVRV 149 +VV+ TV+V Sbjct: 323 ATVVNAQTVQV 333 >gi|156934444|ref|YP_001438360.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter sakazakii ATCC BAA-894] gi|156532698|gb|ABU77524.1| hypothetical protein ESA_02275 [Cronobacter sakazakii ATCC BAA-894] Length = 219 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV S + G +L+ES ++ + + N ++ VT R L + Sbjct: 89 VNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAAN 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + LS++ + + + G +V+I+ +I+ G AL++A++ V+ + +G +VSG Sbjct: 149 QPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 IVGSDGIILI 217 >gi|24112483|ref|NP_706993.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella flexneri 2a str. 301] gi|30062610|ref|NP_836781.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella flexneri 2a str. 2457T] gi|24051369|gb|AAN42700.1| flagellar basal body P-ring protein FlgA precursor [Shigella flexneri 2a str. 301] gi|30040856|gb|AAP16587.1| flagellar basal body P-ring protein FlgA precursor [Shigella flexneri 2a str. 2457T] gi|281600492|gb|ADA73476.1| Flagellar basal body P-ring protein FlgA [Shigella flexneri 2002017] gi|332759617|gb|EGJ89922.1| flagella basal body P-ring formation protein flgA [Shigella flexneri 2747-71] Length = 219 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + + +VSG Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVVSG 207 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 208 VVDADGNILI 217 >gi|168822615|ref|ZP_02834615.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340989|gb|EDZ27753.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086387|emb|CBY96160.1| Flagella basal body P-ring formation protein flgA Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 219 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V I G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVDAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|114330357|ref|YP_746579.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas eutropha C91] gi|114307371|gb|ABI58614.1| putative flagella basal body P-ring formation protein [Nitrosomonas eutropha C91] Length = 231 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 5/141 (3%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 ++LYV VI + + + IN G++++ + +V I VV Sbjct: 94 AWTLYVPVEI----EVIANVIHAAQPINMGKLVDTQDIVSKEVDLVRIPAGAVTDPDQVV 149 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 G V L I L PY+I+RG K+R+ T +ST G AL+ A+ G+V+ + Sbjct: 150 GKVAVTFLASGQPIRTHQLRAPYIITRGQKIRLTATGAGFAVSTEGEALAAAAEGEVVQI 209 Query: 129 KNIDTGVMVSGSVVDTGTVRV 149 +N TG ++SG G V + Sbjct: 210 RN-HTGRIMSGIARAGGIVEI 229 >gi|77463603|ref|YP_353107.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] gi|77388021|gb|ABA79206.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter sphaeroides 2.4.1] Length = 222 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G V+ L + D++G + L P + L ++ Sbjct: 109 RPLARGSVIAAEDLASGPESARWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 160 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++RG V + + G + + AL D ++GD++ V+N+ +G + +V V Sbjct: 161 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 217 >gi|317047687|ref|YP_004115335.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. At-9b] gi|316949304|gb|ADU68779.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. At-9b] Length = 219 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + V G +V + + G + S + + S V + R + P Sbjct: 89 VQVQVTGLYLVANHQLMRGSNVTASDFRLQSGRLDTLPARTLFSADSVADAIAMRDITPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + +++ P+ + G V ++ + S+ G AL++A+ ++ V+ + G +VSG Sbjct: 149 QPVTATMVRLPWRVKAGQNVIVVASGNGFDASSEGQALNNATTAQMVRVR-MGNGQVVSG 207 Query: 140 SVVDTGTVRVVV 151 V + G + + + Sbjct: 208 RVGEDGNILISL 219 >gi|91776305|ref|YP_546061.1| flageller protein FlgA [Methylobacillus flagellatus KT] gi|91710292|gb|ABE50220.1| flagellar protein FlgA [Methylobacillus flagellatus KT] Length = 235 Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 5/144 (3%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +++YV + V+ +V + + G ++ E L + + + Sbjct: 96 PQVWTIYVQANV----QVMAEYLVAAAPLAQGHIITEQDLAKSHGDLAKLPPGVFTDASQ 151 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +G L V+ +L V+ +G KV + +S G AL+ A G + Sbjct: 152 AIGRAVYVPLSAGTVLRQEMLRVLPVVQQGQKVILNTMGEGFKVSAEGTALTSAGDGQRV 211 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150 VK + G +VSG G + V+ Sbjct: 212 KVK-VGNGRVVSGLARRGGLIEVI 234 >gi|323976555|gb|EGB71643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TW10509] Length = 219 Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 5/152 (3%) Query: 2 DCVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57 + ++ L D + V G+ VV ++ I G L +K + + Sbjct: 67 NSRQWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLP 126 Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 I ++ V+ R L P+ I L+ L + + + G +V +I + + G AL Sbjct: 127 PRTVLDINQLIDAVSLRDLSPEQPIQLTQLRQAWRVKAGQRVNVIANGDGFSANAEGQAL 186 Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++A++ V+ + +G ++SG V G + + Sbjct: 187 NNAAVAQNARVR-MVSGQVISGVVDADGNILI 217 >gi|126462435|ref|YP_001043549.1| SAF domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104099|gb|ABN76777.1| SAF domain [Rhodobacter sphaeroides ATCC 17029] Length = 220 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G V+ L + D++G + L P + L ++ Sbjct: 107 RPLARGSVIAAEDLASGPESARWHA--------DLIGRRLKVALAPGQPVLPRHLEPDWL 158 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++RG V + + G + + AL D ++GD++ V+N+ +G + +V V Sbjct: 159 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 215 >gi|331657133|ref|ZP_08358095.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA206] gi|331055381|gb|EGI27390.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA206] Length = 156 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + +G +VSG Sbjct: 86 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MISGQVVSG 144 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 145 VVDADGNILI 154 >gi|238796900|ref|ZP_04640404.1| Flagellar basal body P-ring biosynthesis protein [Yersinia mollaretii ATCC 43969] gi|238719160|gb|EEQ10972.1| Flagellar basal body P-ring biosynthesis protein [Yersinia mollaretii ATCC 43969] Length = 230 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 1/122 (0%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 I G + + + + + + +VG R + I + L R Sbjct: 109 ARKTIKPGSEIQAENIVSRTGSLDRLPAGLVFNKESIVGQTAARTITRGQPIVQTQLRRR 168 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + I G +V I +T I G AL +A++G + + + +G ++ G G V + Sbjct: 169 WAIVSGQEVEITVTGPGFRIRAKGKALDNAAVGKPVRIA-MRSGQIMPGVASSEGKVDIN 227 Query: 151 VK 152 +K Sbjct: 228 LK 229 >gi|227356005|ref|ZP_03840397.1| flagella basal body P-ring formation protein [Proteus mirabilis ATCC 29906] gi|227163993|gb|EEI48895.1| flagella basal body P-ring formation protein [Proteus mirabilis ATCC 29906] Length = 218 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SV G +V IN +V+ +S +K ++ + + + + R + Sbjct: 85 FIQVDVSVYGQYLVAKKEINRDDVITKSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + I +++ RP+ I G V + + I G A+++A + I ++ + +G + Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203 Query: 137 VSGSVVDTGTVRV 149 ++G ++ G+VR+ Sbjct: 204 ITGEALENGSVRI 216 >gi|146277660|ref|YP_001167819.1| flagellar basal body P-ring biosynthesis protein-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145555901|gb|ABP70514.1| Flagellar basal body P-ring biosynthesis protein-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 225 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V + + G L L + R + ++G + L P I L Sbjct: 105 VTLARPVARGSALAAEDLAPGDGSAEQKRWQ-----QALIGRRLKVALAPGQPILPRHLE 159 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++++RG V + + G + + TAG AL+DA++GD++ V+N+ +G ++ +V Sbjct: 160 PDWLVTRGGPVALRVAVGPIEVLTAGEALADAALGDLVEVRNLSSGAILRATVTARN 216 >gi|82702447|ref|YP_412013.1| flageller protein FlgA [Nitrosospira multiformis ATCC 25196] gi|82410512|gb|ABB74621.1| flagellar protein FlgA [Nitrosospira multiformis ATCC 25196] Length = 248 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + V+ +V + + G+V++ S L + + + +G Sbjct: 112 WTIYVRATV----KVVAEYLVSTRPLRQGQVIDASDLTSRKGDLTQLPPGIVTDWNQAIG 167 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L + +L + + V+++ + ++S G AL+ A+ G + V+ Sbjct: 168 RTLGGNLPFGSPLRQDMLRAQTAVIQNQTVKLVSSGRGFSVSAEGKALTHATEGQPVTVR 227 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 +G +VSG V V Sbjct: 228 -SASGAVVSGIARAGAIVEVTY 248 >gi|297538892|ref|YP_003674661.1| flagella basal body P-ring formation protein FlgA [Methylotenera sp. 301] gi|297258239|gb|ADI30084.1| flagella basal body P-ring formation protein FlgA [Methylotenera sp. 301] Length = 251 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 5/143 (3%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +++YV + + VI +V + + G+ + E + + + Sbjct: 112 PNVWTIYVQATVN----VIAQYLVAASPLAQGQTVTEQDMMFESGDLTQLPAGVFTEQSQ 167 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +G + V+ +L V+ G V + ++S G++++ A+ G V+ Sbjct: 168 AIGRTVNISMNAGAVLRQELLKVAPVVQLGQTVMVTSKGNGFSVSAEGLSMAKANEGQVV 227 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 VK + +G +V+G + G V V Sbjct: 228 QVK-VASGQIVTGIARNGGQVEV 249 >gi|149201629|ref|ZP_01878603.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] gi|149144677|gb|EDM32706.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. TM1035] Length = 232 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A+V + + G VL + L+E + + RG+ S + +G + L + Sbjct: 106 PALVLTESLPRGTVLEATHLREAPI-GARARGDLVMSPETAIGRRLKSNLGAGQPLLARH 164 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L + + G V I G + I AG+AL +G I V N +G +V +V Sbjct: 165 LEHDWQVDVGGPVTIATDLGGIRIEAAGVALEPGQMGQDIRVTNAGSGEVVHVTVTGRNK 224 Query: 147 VRV 149 V V Sbjct: 225 VTV 227 >gi|152979911|ref|YP_001353107.1| flagellar basal body P-ring biosynthesis protein [Janthinobacterium sp. Marseille] gi|151279988|gb|ABR88398.1| Flagellar basal body P-ring biosynthesis protein [Janthinobacterium sp. Marseille] Length = 234 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 56/145 (38%), Gaps = 5/145 (3%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +++YV + V G + + + G+ + + +++ +N+ Sbjct: 95 PTVWTIYVSAQV----RVHGEYIAAAAPLAQGQNIGPGDIAKVKGDLTNLPSGVITDASQ 150 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 +G + + L I +G VR+IL ++S+ AL++A+ G + Sbjct: 151 AIGRTAATTIALGAPLRQDALRNQQAIQQGQAVRVILNGDGFSVSSEARALNNANEGQLT 210 Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151 V+ G ++SG G V + Sbjct: 211 QVR-TAAGQVISGIAKLGGIVELAY 234 >gi|92116935|ref|YP_576664.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter hamburgensis X14] gi|91799829|gb|ABE62204.1| flagellar protein FlgA [Nitrobacter hamburgensis X14] Length = 373 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 1/122 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A V + ++ +L S + + + + + A + V+G+ RR + + + L Sbjct: 210 AAVLARDVDRNSLLKFSDVVMERRPKAEVGNDAA-NRDHVIGMQARRQMRAGQALRRADL 268 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P ++ R V +I + ++ G A + GDV++ N+ + VSG VV G V Sbjct: 269 TKPDLVQRDQAVTLIYQAAGIYLTVRGKATESGTEGDVVSALNLQSKRTVSGVVVGRGQV 328 Query: 148 RV 149 V Sbjct: 329 SV 330 >gi|167835106|ref|ZP_02461989.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia thailandensis MSMB43] Length = 152 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 +V V + I GE L + L + + + VG T + Sbjct: 22 AKLAVQATYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVGATTLTRVAAG 81 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + +L +S G VR++ + TIS G L++A+ G + V+ + G +V+ Sbjct: 82 LPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR-MAAGQIVTA 140 Query: 140 SVVDTGTVRV 149 V D TV + Sbjct: 141 IVKDAATVEI 150 >gi|329297214|ref|ZP_08254550.1| flagella basal body P-ring formation protein FlgA [Plautia stali symbiont] Length = 170 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G +V + + G ++ + + + S ++ + R + P + Sbjct: 48 QVTGEYLVANRQLARGSNVSANDFR-----LDTLPARALLSSSNLADAIALRDIAPGQPV 102 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++L +P+ + G V +I + S+ G AL++AS + V+ + G++VSG V Sbjct: 103 TATMLRQPWRVKAGQNVMVIASGNGFNASSEGRALNNASAAQTVRVR-MSNGLVVSGRVS 161 Query: 143 DTGTVRVVV 151 + G + + + Sbjct: 162 EDGNILISL 170 >gi|332558459|ref|ZP_08412781.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332276171|gb|EGJ21486.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 222 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G V+ L ++ D++G + L + L ++ Sbjct: 109 RPLARGSVIAAEDLASGPLSARWHA--------DLIGRRLKVALAAGQPVLPRHLEPDWL 160 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++RG V + + G + + AL D ++GD++ V+N+ +G + +V V Sbjct: 161 VTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAEV 217 >gi|258592559|emb|CBE68868.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 351 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 57/138 (41%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 LY ++ S++ VV + + V+ + ++ + + + VG Sbjct: 211 LYRAVSLAVRLSLMREVVVVNYPLPRHTVVKGADVRLERRDIGPLAHEPLQDLTLAVGRR 270 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 T R L V+ + P +I +G V +++ + ++ GIA G ++ VKN Sbjct: 271 TTRTLAMGEVVVSESVELPPLIQKGEVVTLMVETPRLLVTAKGIAQEVGKAGQLVRVKNT 330 Query: 132 DTGVMVSGSVVDTGTVRV 149 +G V G + T+R+ Sbjct: 331 ASGREVIGKLETDKTIRI 348 >gi|260429306|ref|ZP_05783283.1| flagella basal body P-ring formation protein FlgA [Citreicella sp. SE45] gi|260419929|gb|EEX13182.1| flagella basal body P-ring formation protein FlgA [Citreicella sp. SE45] Length = 139 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VV + I A EV+ ++ S+ DVVG + P + Sbjct: 14 PAQAETVVATRTIRALEVIPPDAVRLDPAEI----AGAHDSLADVVGQEALVAIYPGRPV 69 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + + P +I R V +I +G + I+T G AL+ ++G+ I V N+ + + G+V Sbjct: 70 LIGTVGIPALIERNQIVELIFAKGALQIATEGRALARGAVGERIRVMNLSSRTTLFGTVT 129 Query: 143 DTGTVRV 149 + G V V Sbjct: 130 EAGAVIV 136 >gi|116626489|ref|YP_828645.1| SAF domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229651|gb|ABJ88360.1| SAF domain [Candidatus Solibacter usitatus Ellin6076] Length = 285 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 1/127 (0%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V VV + + AG ++ +RL+ G Y +I++ G V RR + + Sbjct: 156 VPVARVVATEALQAGRPIDPARLRVESREELPATG-YLAAIEETAGKVPRRSIAAGTPLR 214 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 L V+ G V++ + G + G+A++ ++GD + V N D+ V Sbjct: 215 AQWLEAARVVMSGDTVQVEIINGGAHLVLDGVAVTSGAVGDTVLVLNPDSKKQFRARVTA 274 Query: 144 TGTVRVV 150 G VRV Sbjct: 275 AGKVRVT 281 >gi|200389413|ref|ZP_03216024.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199601858|gb|EDZ00404.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 219 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + IG+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQAIGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPKTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|294084427|ref|YP_003551185.1| SAF domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664000|gb|ADE39101.1| SAF domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 295 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 V + + G+++ + + V+ + G + DVVG + + + Sbjct: 167 TARVVSLTRSMTRGDIITPEDVAFIDVSMREVVGVFF-DHDDVVGRRLKTSISARKPVFA 225 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 LH +++ + +V ++ G + +S G AL + G+ I VKN ++ +V G ++++ Sbjct: 226 RQLHPYWMVEKDQEVTLVNRAGAVAVSMLGYALENGQFGEWIKVKNANSDKIVHGQIINS 285 Query: 145 GTV 147 + Sbjct: 286 KKI 288 >gi|197285514|ref|YP_002151386.1| flagella basal body P-ring formation protein [Proteus mirabilis HI4320] gi|194683001|emb|CAR43457.1| flagella basal body P-ring formation protein [Proteus mirabilis HI4320] Length = 218 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SV G +V IN +V+ S +K ++ + + + + R + Sbjct: 85 FIQVDVSVYGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + I +++ RP+ I G V + + I G A+++A + I ++ + +G + Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203 Query: 137 VSGSVVDTGTVRV 149 ++G ++ G+VR+ Sbjct: 204 ITGEALENGSVRI 216 >gi|291336858|gb|ADD96390.1| predicted flagellar basal body P ring biosynthesis protein [uncultured organism MedDCM-OCT-S09-C206] Length = 239 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V I+ G+V++E L I G Y + I V+G + + ++ L Sbjct: 115 VAVLIKNISKGQVISEEYLGFEARPERQIHGAY-NHISGVLGRKAKNNIAAGTILKARHL 173 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 Y + + V +I +TI+T+ IAL + +GD+IAVKN+ + + V Sbjct: 174 DTVYSVDKNDSVLVIAANKAITITTSAIALENGQVGDMIAVKNVKSEKTFKVIITGKKKV 233 >gi|116694215|ref|YP_728426.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia eutropha H16] gi|113528714|emb|CAJ95061.1| flagellar basal body P ring formation protein [Ralstonia eutropha H16] Length = 263 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+ V + + GE + ++ ++ Q + + G VT + I Sbjct: 137 SVLTDYYVAARALGPGEPVGQADIEVRQGDLGTLPRAVITDPAQLAGAVTANRIAAGSPI 196 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L + + +G V + + I++ G L+DA+ G+ + V+ + +G +V+G V Sbjct: 197 RSDLLRKAIAVRQGQTVTVAVEGDAFQITSEGKVLADAATGNTVQVR-LRSGQVVNGLVR 255 Query: 143 DTGTV 147 TV Sbjct: 256 SGDTV 260 >gi|16760049|ref|NP_455666.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142180|ref|NP_805522.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|197251473|ref|YP_002146870.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|213161848|ref|ZP_03347558.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417745|ref|ZP_03350863.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424676|ref|ZP_03357441.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213648922|ref|ZP_03378975.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238911007|ref|ZP_04654844.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289828584|ref|ZP_06546409.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25323459|pir||AF0639 flagellar basal body P-ring protein FlgA precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502343|emb|CAD08297.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29137810|gb|AAO69371.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|197215176|gb|ACH52573.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 219 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|161614605|ref|YP_001588570.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168237254|ref|ZP_02662312.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168264035|ref|ZP_02686008.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194737046|ref|YP_002114172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|198242724|ref|YP_002215964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857319|ref|YP_002243970.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161363969|gb|ABX67737.1| hypothetical protein SPAB_02355 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194712548|gb|ACF91769.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289897|gb|EDY29258.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937240|gb|ACH74573.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205347335|gb|EDZ33966.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709122|emb|CAR33455.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|322616543|gb|EFY13452.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620516|gb|EFY17380.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622510|gb|EFY19355.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629661|gb|EFY26436.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632619|gb|EFY29365.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636886|gb|EFY33589.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641576|gb|EFY38214.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644066|gb|EFY40612.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650033|gb|EFY46451.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653959|gb|EFY50282.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658491|gb|EFY54753.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663349|gb|EFY59551.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670083|gb|EFY66223.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674853|gb|EFY70944.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676677|gb|EFY72744.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682599|gb|EFY78618.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686648|gb|EFY82627.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195762|gb|EFZ80938.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198346|gb|EFZ83450.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203170|gb|EFZ88200.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209173|gb|EFZ94110.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209677|gb|EFZ94606.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217867|gb|EGA02582.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222155|gb|EGA06539.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224927|gb|EGA09185.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229669|gb|EGA13792.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232894|gb|EGA16990.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240629|gb|EGA24671.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242943|gb|EGA26964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250260|gb|EGA34149.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252635|gb|EGA36473.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258837|gb|EGA42490.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261026|gb|EGA44619.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266935|gb|EGA50420.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269976|gb|EGA53425.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 219 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|62179690|ref|YP_216107.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127323|gb|AAX65026.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714160|gb|EFZ05731.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 219 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + I G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPIARGGKLMPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|85705077|ref|ZP_01036177.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] gi|85670399|gb|EAQ25260.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp. 217] Length = 232 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A+V + + G VL L+E+++ + + + +++ +G + L + + L Sbjct: 107 ALVLAESLPRGTVLRAEHLREVEI-ATTGQSDLVEAVETAIGRRLKSNLGAGQPLLVRHL 165 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + + G V I+ G + I AG+AL +G I V N +G +V +V V Sbjct: 166 EHDWQVEEGGPVTIVTAMGGIRIEAAGVALEAGQVGQAIRVTNAGSGDVVHVTVTGRNKV 225 Query: 148 RV 149 V Sbjct: 226 TV 227 >gi|220924577|ref|YP_002499879.1| flagella basal body P-ring formation protein FlgA [Methylobacterium nodulans ORS 2060] gi|219949184|gb|ACL59576.1| flagella basal body P-ring formation protein FlgA [Methylobacterium nodulans ORS 2060] Length = 343 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 51/125 (40%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + V + + GE + + + + + +VG V +R L P + Sbjct: 204 MIEVAVLTRALARGESVGAADVTVQRRARDGSSADATADAASLVGQVAQRALAPGQKLRA 263 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 L RP ++ RG V I+ ++++ G A +G V+AV N + ++ +V Sbjct: 264 GDLARPELVQRGETVTILYEGPGVSLALRGQAKEGGPLGAVVAVVNPVSKKVLQATVSGP 323 Query: 145 GTVRV 149 G V V Sbjct: 324 GRVSV 328 >gi|218887605|ref|YP_002436926.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758559|gb|ACL09458.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 346 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 2/131 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S F V + +N +VL ++ ++ + +R + R + Sbjct: 217 SAFVDVWADVPCAAQPVNKDDVLTPEKITRVRKNLAYLREPAWDGLGGP--WRLTRPVGA 274 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 D VI S L + RG+ V ++ G++ + G A++D +G+ I V+N+ + + Sbjct: 275 DQVIYQSDLSGVPTVRRGSVVTVLYDSGSVRLQVQGEAMADGGLGETIPVRNMQSKRQIY 334 Query: 139 GSVVDTGTVRV 149 +V D GTV V Sbjct: 335 AAVKDGGTVVV 345 >gi|303328379|ref|ZP_07358817.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3] gi|302861709|gb|EFL84645.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3] Length = 417 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 2/119 (1%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 S + G+ L + M++ S +R R L+ I S L Sbjct: 300 ASRPLGKGDALTPEAVTFMRINASQLRDLPWDGHGGP--WQVTRSLITGEPILQSDLASQ 357 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG + +I T+GN+ ++T AL+D G I V+N+ T + +V D TV + Sbjct: 358 LMVRRGTILSLIYTRGNLRMTTQAEALADGEPGATIPVRNLQTKKQIYATVKDGSTVEI 416 >gi|94312665|ref|YP_585874.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus metallidurans CH34] gi|93356517|gb|ABF10605.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus metallidurans CH34] Length = 245 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+ V + + GE + + L+ Q + + V G V+ + + Sbjct: 118 SVLTDYYVAARAMGPGETITAADLEVRQGDLAMLPRAVVTDPSQVDGAVSANRIAAGSPM 177 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 ++ +P + G V + + + +S+ G L+DA+ G+++ V+ + G +VSG V Sbjct: 178 RTDLVRKPIAVKSGQTVNVTVEGDSFQLSSEGKVLTDAATGNMVQVR-LRNGQVVSGLVR 236 Query: 143 DTGTV 147 TV Sbjct: 237 SGDTV 241 >gi|312880334|ref|ZP_07740134.1| flagella basal body P-ring formation protein FlgA [Aminomonas paucivorans DSM 12260] gi|310783625|gb|EFQ24023.1| flagella basal body P-ring formation protein FlgA [Aminomonas paucivorans DSM 12260] Length = 312 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 1/152 (0%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 M V + S + VV + GE + + +++ + Sbjct: 157 MRSVSLNVATSEEPARFVRVVLRWYQPQVVAKSPLRKGETIRREDV-FLRLGIQDTYRLL 215 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 AHS + V G V R + + + VL R V+ G +V + G++ + G AL Sbjct: 216 AHSFQQVEGKVLRIPVKAGVPVAMEVLVRDEVVHAGNQVVLSSVVGSVAVEAKGRALEQG 275 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 ++GD I V+N+DT +VSG V+ G V ++ K Sbjct: 276 AVGDTIRVRNLDTRQIVSGVVIGPGRVEILQK 307 >gi|56413840|ref|YP_150915.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167553040|ref|ZP_02346790.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197362763|ref|YP_002142400.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128097|gb|AAV77603.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094240|emb|CAR59745.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205322449|gb|EDZ10288.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 219 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTSANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|332704822|ref|ZP_08424910.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio africanus str. Walvis Bay] gi|332554971|gb|EGJ52015.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio africanus str. Walvis Bay] Length = 328 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRRVLLPDHVIPLSV 86 S +N GE + + + + RG G +R + + L + Sbjct: 211 ASRPVNPGEAITPDMVTFQEKNLAYFRG------APWDGKGGPWQVKRPVGTEQPFSLDI 264 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L ++ +G+ V ++ ++ ++ A+ +G+ I V+NI +G +V V+ T Sbjct: 265 LEPVPLVVKGSTVNLVYQGRHVQLAIQAEAMQAGGLGETIPVRNIHSGKLVQAVVMSKDT 324 Query: 147 VRV 149 V V Sbjct: 325 VAV 327 >gi|255603613|ref|XP_002538081.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] gi|223513891|gb|EEF24302.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] Length = 288 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 ++LYV + ++ G V + ++ G + + + S + + + G Sbjct: 152 WTLYVQADVQVW----GEYAVTGLPVSQGSPVQTTDVVMQSGDLSKLPAGIITDLSMLEG 207 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L V+ +L VI +G V++ IS G A+ A++G V+ VK Sbjct: 208 KQAALNLPLGTVLRPELLKSVPVIKQGQTVQLNSRGDGFVISADGTAMQTANVGQVVDVK 267 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 + +G +V G +G V V Sbjct: 268 -VSSGQIVKGVAQSSGKVDV 286 >gi|313650479|gb|EFS14886.1| flagella basal body P-ring formation protein flgA [Shigella flexneri 2a str. 2457T] gi|332761415|gb|EGJ91699.1| flagella basal body P-ring formation protein flgA [Shigella flexneri K-671] gi|332767677|gb|EGJ97870.1| flagella basal body P-ring formation protein FlgA [Shigella flexneri 2930-71] gi|333019308|gb|EGK38591.1| flagella basal body P-ring formation protein flgA [Shigella flexneri K-304] Length = 156 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I L+ + + + G +V +I + + + G AL++A++ V+ + + +VSG Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVVSG 144 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 145 VVDADGNILI 154 >gi|213865509|ref|ZP_03387628.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 219 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I ++++ G A+++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVKAGQRVQVIANGEGVSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|167576658|ref|ZP_02369532.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis TXDOH] Length = 253 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A + V + ++A E + L+ + T +++ + + +G +RR Sbjct: 109 TKLTARAQITATIPVAARDLDARETIAAGDLRTARRTLTSLT-DTVTRADEAIGRTSRRS 167 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134 L V+ +L P +I RG VRI+ G I GIA+ + + DVI V+ Sbjct: 168 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRVRVGTRKD 227 Query: 135 -VMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 228 AKVVTVRVTGPGTAEPIAQ 246 >gi|74317656|ref|YP_315396.1| flagellar basal body P-ring biosynthesis protein FlgA [Thiobacillus denitrificans ATCC 25259] gi|74057151|gb|AAZ97591.1| putative flagella basal body P-ring formation protein [Thiobacillus denitrificans ATCC 25259] Length = 237 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++Y+ + L A+ V + A VL E+ L + N+ + A + ++G Sbjct: 101 WTVYLGADVRLIAA----YAVTRHPVPANHVLTEADLTLREGNLGNLPTDVARDVGALLG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 T L + ++L P + +G R++L ++ T G AL++A G+ + VK Sbjct: 157 YRTVSGLAAGAPLRAALLRAPLAVQQGQTTRLVLNGPGFSVQTEGQALANAGRGERVRVK 216 Query: 130 NIDTGVMVSGSVVDTGTVRVV 150 +G +VSG D V V Sbjct: 217 -TRSGQVVSGVAQDGQQVVVA 236 >gi|324113867|gb|EGC07841.1| flagella basal body P-ring formation protein FlgA [Escherichia fergusonii B253] Length = 156 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 G+ VV + I G V+N S + + + + V ++ R + P + Sbjct: 29 QASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPGQPV 88 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L++L + + I G +V++I ++ G AL++A++ V+ + +G +VSG V Sbjct: 89 QLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSGIVG 147 Query: 143 DTGTVRV 149 G + + Sbjct: 148 ADGNILI 154 >gi|72122783|gb|AAZ64969.1| Flageller protein FlgA [Ralstonia eutropha JMP134] Length = 290 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+ V + GE + + L+ Q S + VVG VT + + Sbjct: 164 SVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAAGSPM 223 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L + + G V + + I++ G L+DA+IG+ + ++ + G +VSG V Sbjct: 224 RTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVSGLVR 282 Query: 143 DTGTV 147 TV Sbjct: 283 SGDTV 287 >gi|325497620|gb|EGC95479.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia fergusonii ECD227] Length = 156 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV + I G V+N S + + + + V ++ R + P Sbjct: 26 VNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIAPG 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L++L + + I G +V++I ++ G AL++A++ V+ + +G +VSG Sbjct: 86 QPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVR-MLSGQVVSG 144 Query: 140 SVVDTGTVRV 149 V G + + Sbjct: 145 IVGADGNILI 154 >gi|209545586|ref|YP_002277815.1| flagellar basal body P-ring biosynthesis protein FlgA [Gluconacetobacter diazotrophicus PAl 5] gi|209533263|gb|ACI53200.1| flagella basal body P-ring formation protein FlgA [Gluconacetobacter diazotrophicus PAl 5] Length = 326 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 51/127 (40%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V + ++A VL+ S ++ + + G+ ++ + Sbjct: 168 HAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMHNVVAGQPV 227 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 LHR V+ +G + I T + ++ G AL D G + N+ +G++V+G V Sbjct: 228 LDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSGMIVTGRVT 287 Query: 143 DTGTVRV 149 ++V Sbjct: 288 SASEIQV 294 >gi|162147477|ref|YP_001601938.1| flagellar basal body P-ring biosynthesis protein FlgA [Gluconacetobacter diazotrophicus PAl 5] gi|161786054|emb|CAP55636.1| putative flagellar protein flgA precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 325 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 51/127 (40%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V + ++A VL+ S ++ + + G+ ++ + Sbjct: 167 HAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMHNVVAGQPV 226 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 LHR V+ +G + I T + ++ G AL D G + N+ +G++V+G V Sbjct: 227 LDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSGMIVTGRVT 286 Query: 143 DTGTVRV 149 ++V Sbjct: 287 SASEIQV 293 >gi|295097207|emb|CBK86297.1| flagella basal body P-ring formation protein FlgA [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 232 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S G V S + GE++ + + M + ++ +D+VG R L + Sbjct: 103 SAQGTFWVASHSLKGGEIVQQGDITPMTGSIDDLPVGLMFEARDIVGQRLLRPLSAGKPV 162 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + L + + + G V ++++ I + G AL++A++ D + VK G V+G V Sbjct: 163 LQNQLRQQWRLRAGQTVELVMSGPGFFIRSQGKALNNAAVDDTLRVK-TTGGRNVTGKVG 221 Query: 143 DTGTVRVVVK 152 G V + ++ Sbjct: 222 RDGAVTIFLE 231 >gi|204930732|ref|ZP_03221605.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320191|gb|EDZ05395.1| flagella basal body P-ring formation protein FlgA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 219 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 149 LPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|237751781|ref|ZP_04582261.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter bilis ATCC 43879] gi|229373147|gb|EEO23538.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter bilis ATCC 43879] Length = 221 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 53/119 (44%), Gaps = 1/119 (0%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + I AG + + S++ S +++ + + + +I + L + Sbjct: 103 ATESIRAGSNITTNSFMTKTQDFSSLA-LIPASRYEILQSSAKVYIPVNTIIYRNKLAKR 161 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++S+ + V+II + S +G AL + GD I ++N+++ ++ V+ V++ Sbjct: 162 MLVSKDSNVKIIFRDNGIEASASGRALENGVQGDTIKIENLESKRTINAKVIAENVVQI 220 >gi|78358197|ref|YP_389646.1| FlgA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220602|gb|ABB39951.1| FlgA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 343 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL----VTRR 74 S+F V + +N G++L + ++ + +RG G R Sbjct: 214 SVFVDVWTGVPAAAFPVNRGDLLGPDAVTMVRKNRAFMRG------DPWDGKGGPWRLTR 267 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 + VI + L ++RG +V ++ + ++ AL+D + GD I V+N+ + Sbjct: 268 AVGQGQVIYAADLEIMPTVARGDRVDLVFRGSRILLTVPAEALADGAAGDSIPVRNLQSR 327 Query: 135 VMVSGSVVDTGTVRV 149 V +V D TV V Sbjct: 328 RQVYATVKDPTTVIV 342 >gi|89069817|ref|ZP_01157152.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola granulosus HTCC2516] gi|89044618|gb|EAR50734.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola granulosus HTCC2516] Length = 136 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 4/117 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I A E++ + L +VG R + + + + Sbjct: 18 LVATRTIRAQEIIAAADLALDAAEF----AGGTSDAALLVGQEARVAIYAGRPVRPADVG 73 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 P ++ R A + +I +TIST G AL A+ G++I V N+ + V+ + G Sbjct: 74 PPAIVERNAILPLIYNSNGLTISTDGRALDRAASGEIIRVMNLSSRTTVTARIGPDG 130 >gi|161611269|ref|YP_299813.2| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia eutropha JMP134] Length = 249 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+ V + GE + + L+ Q S + VVG VT + + Sbjct: 123 SVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAAGSPM 182 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L + + G V + + I++ G L+DA+IG+ + ++ + G +VSG V Sbjct: 183 RTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVSGLVR 241 Query: 143 DTGTV 147 TV Sbjct: 242 SGDTV 246 >gi|171059416|ref|YP_001791765.1| flagella basal body P-ring formation protein FlgA [Leptothrix cholodnii SP-6] gi|170776861|gb|ACB35000.1| flagella basal body P-ring formation protein FlgA [Leptothrix cholodnii SP-6] Length = 255 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 5/151 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C + +++Y+ ++ G AVV + + A VL + L+ +V + Sbjct: 110 LRCTEGPVAWNVYLPVTVRVW----GQAVVTAGSLPADTVLGAADLRLGEVDLAEQASPA 165 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 S+ +++G R L P + L + G VR+I +S+ A+S Sbjct: 166 YTSMAELIGRRVARALPPGATLRADSLRARQWFAAGDTVRVITQGTGFAVSSEAQAMSPG 225 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G ++ ++G ++S V V + Sbjct: 226 LEGQPARLR-TESGRILSAWPVGERRAEVRM 255 >gi|205353089|ref|YP_002226890.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272870|emb|CAR37799.1| flagellar basal body P-ring protein FlgA precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628169|gb|EGE34512.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 219 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 89 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G +++A++ V+ + +G +VSG Sbjct: 149 QPVQLTMIRQAWRVEAGQRVQVIANGEGFSVNAEGQVMNNAAVAQNARVR-MTSGQIVSG 207 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 208 TVDSDGNILI 217 >gi|304392505|ref|ZP_07374445.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp. R2A130] gi|303295135|gb|EFL89495.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp. R2A130] Length = 135 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 1/128 (0%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDH 80 A +VP I GE + S L+ ++V R + +D +G V LL Sbjct: 5 ALAQDQVLVPVRTIYPGETITASDLRLVEVAAGRERRQGVLRNWEDGIGRVATATLLARR 64 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 I L P+ + G VR+ + +TI T G AL ++G IAV++ + Sbjct: 65 YIVTRTLVVPHAVKVGEVVRVTFRRAGLTIETKGQALQSGAVGKAIAVRSRGNAKVYQAV 124 Query: 141 VVDTGTVR 148 + G V Sbjct: 125 ITAPGMVE 132 >gi|134095101|ref|YP_001100176.1| basal-body periplasmic P ring assembly protein [Herminiimonas arsenicoxydans] gi|133739004|emb|CAL62052.1| Flagella basal body P-ring formation protein FlgA precursor [Herminiimonas arsenicoxydans] Length = 235 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 5/139 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + V G + + ++ G+ + + + ++ + + +G Sbjct: 99 WTIYVQAKV----QVHGEYIAAAAPLSQGQTIGQGDIATLKGDLTTLPAGVITDASQAIG 154 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + L I +G VR+++ ++S+ AL++A+ G + V+ Sbjct: 155 RTAATTVALGAPLRQDALRNQQAIQQGQAVRVVVNGAGFSVSSEARALNNANEGQLTQVR 214 Query: 130 NIDTGVMVSGSVVDTGTVR 148 G ++SG G V Sbjct: 215 -TPAGQVISGIAKLGGIVE 232 >gi|317153843|ref|YP_004121891.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio aespoeensis Aspo-2] gi|316944094|gb|ADU63145.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio aespoeensis Aspo-2] Length = 338 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG--LVTRRVL 76 ++F + V + +N E + + M++ Y + D VG R L Sbjct: 210 TVFVDIWKAVPVAAKPLNRFERVTTDNVTFMRMNL-----AYNPDLWDGVGGPWRMARTL 264 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 + +S L R +I +G +V ++ + +S AL +A +G ++V+N+ + + Sbjct: 265 GRNQPFSMSHLERVPLIEKGDRVNLVFQSQRVQLSMKAEALGEADMGQQVSVRNLQSNKV 324 Query: 137 VSGSVVDTGTVRV 149 + +VV TV V Sbjct: 325 ILATVVGNNTVMV 337 >gi|167626151|ref|YP_001676445.1| SAF domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167356173|gb|ABZ78786.1| SAF domain [Shewanella halifaxensis HAW-EB4] Length = 248 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 4/140 (2%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +SLYV + S+ + V + V+ GE + + + V + + ++VG Sbjct: 111 WSLYVRASVSVSVKIP----VANRVLKRGEHILAADIDWKVVKLRPSDRDLVTGLDEIVG 166 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 R + I L P ++ G +V I + G AL G I V+ Sbjct: 167 RQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVR 226 Query: 130 NIDTGVMVSGSVVDTGTVRV 149 N+ +G ++S + G V Sbjct: 227 NLSSGKVISAYPIAKGRVET 246 >gi|295688783|ref|YP_003592476.1| flagella basal body P-ring formation protein FlgA [Caulobacter segnis ATCC 21756] gi|295430686|gb|ADG09858.1| flagella basal body P-ring formation protein FlgA [Caulobacter segnis ATCC 21756] Length = 254 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + + AGE++ L +++ + + V+GL +R L + + Sbjct: 120 ARSMTAGEIVQPEDLVWVKM--AGAPADAPRDADAVIGLAAKRPLREGAAVSQRDVGAAQ 177 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ G + + + G +++S G A+S AS G+V AV+N + ++ + G V Sbjct: 178 VVKTGDLITVTYSDGGISLSLQGKAMSAASTGEVFAVQNTASKKIIQAVAIGPGAAAV 235 >gi|46578929|ref|YP_009737.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448341|gb|AAS94996.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 310 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 2/131 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 + F V + +N G+ L ++ M+ +++R +R + Sbjct: 181 TAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAAPWDGRGGP--WQLQRPVGA 238 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 V+ + ++RG V ++ + ++ G AL+D G+ I V+N+ + V Sbjct: 239 GQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALADGMPGETIQVRNLQSRKQVY 298 Query: 139 GSVVDTGTVRV 149 +V D TV V Sbjct: 299 ATVRDGSTVVV 309 >gi|120603470|ref|YP_967870.1| FlgA family protein [Desulfovibrio vulgaris DP4] gi|120563699|gb|ABM29443.1| FlgA family protein [Desulfovibrio vulgaris DP4] gi|311232787|gb|ADP85641.1| flagellar basal body P-ring formation protein FlgA [Desulfovibrio vulgaris RCH1] Length = 324 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 2/131 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 + F V + +N G+ L ++ M+ +++R +R + Sbjct: 195 TAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAAPWDGRGGP--WQLQRPVGA 252 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 V+ + ++RG V ++ + ++ G AL+D G+ I V+N+ + V Sbjct: 253 GQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALADGMPGETIQVRNLQSRKQVY 312 Query: 139 GSVVDTGTVRV 149 +V D TV V Sbjct: 313 ATVRDGSTVVV 323 >gi|124268258|ref|YP_001022262.1| flagellar basal body P-ring biosynthesis protein [Methylibium petroleiphilum PM1] gi|124261033|gb|ABM96027.1| flagellar basal body P-ring biosynthesis protein [Methylibium petroleiphilum PM1] Length = 239 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C++ +++Y+ ++ G A+V + + AG VL + L+E ++ + Sbjct: 94 LRCLQGEKKWNVYLPITVRVY----GRALVAASALPAGTVLTAADLREAEIDLAADPAAA 149 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 ++ +G R++ + ++L + G V+++ ++ + G A++ Sbjct: 150 LTDPQEAIGRSLLRMVSAGEDLRQNLLRARQWFAAGETVQLVAVGPGFSVQSEGQAITPG 209 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 G + V+ ++G +V+G V V + + Sbjct: 210 LDGSPVRVR-TESGRIVTGLPVGERRVELRL 239 >gi|167614833|ref|ZP_02383468.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis Bt4] gi|257141418|ref|ZP_05589680.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] Length = 248 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + T +++ + + +G +RR Sbjct: 104 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 162 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134 L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++ Sbjct: 163 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 222 Query: 135 -VMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 223 AKVVTVRVTGPGTAEPIAQ 241 >gi|83717277|ref|YP_438385.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] gi|83651102|gb|ABC35166.1| flagella basal body P-ring formation protein FlgA [Burkholderia thailandensis E264] Length = 257 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + T +++ + + +G +RR Sbjct: 113 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 171 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134 L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++ Sbjct: 172 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 231 Query: 135 -VMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 232 AKVVTVRVTGPGTAEPIAQ 250 >gi|188592113|ref|YP_001796711.1| flagellar basal body p-ring biosynthesis protein flga [Cupriavidus taiwanensis LMG 19424] gi|170938487|emb|CAP63474.1| FlgA: Flagella basal body P-ring formation protein ; signal peptide [Cupriavidus taiwanensis LMG 19424] Length = 260 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 SV+ V + + AGE + ++ ++ Q + + G VT + + Sbjct: 134 SVLTDYYVAARALGAGEPVGQADVEIRQGDLGALPRAVITDPAQLAGAVTANRIAAGSPL 193 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 +L + + +G V + + I++ G L+DA+ G+ + V+ + G +V+G V Sbjct: 194 RTDLLRKAIAVRQGQTVTVAVEGAAFQITSEGKVLADAATGNTVQVR-LRNGQVVNGLVR 252 Query: 143 DTGTV 147 TV Sbjct: 253 SGDTV 257 >gi|197104380|ref|YP_002129757.1| distal basal-body ring component protein FlaD [Phenylobacterium zucineum HLK1] gi|196477800|gb|ACG77328.1| distal basal-body ring component protein FlaD [Phenylobacterium zucineum HLK1] Length = 252 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + I AGEV+ + L + + V+G+ RR L + + Sbjct: 119 ARSIAAGEVIQPADLVWGKAAAAPADAPSDPDA--VIGMAARRPLREGAAVAGRDIAALE 176 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ G V + +++S ALS + G+ I V+N + +V V G V Sbjct: 177 VVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAV 234 >gi|284007177|emb|CBA72463.1| flagellar basal body P-ring biosynthesis protein FlgA [Arsenophonus nasoniae] Length = 224 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 1/133 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L SV G+ V + I V+N+ + + + I + V+ R + Sbjct: 92 LAVSVEGNYWVANQPIKRHSVINQHNVVAKRGLLEKLPRGIIRDIHAYINSVSLRDIAAG 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I ++L R +VI G V + + + G A+++A+ + + +K + TG +++ Sbjct: 152 QPISQNMLRRAWVIQAGKHVTVYAQGRHFQVKYEGKAINNAAENESVRLK-MPTGQIITA 210 Query: 140 SVVDTGTVRVVVK 152 G ++ +K Sbjct: 211 IAQKEGYAKITLK 223 >gi|326623713|gb|EGE30058.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 156 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 26 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 86 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 144 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 145 TVDSDGNILI 154 >gi|323697473|ref|ZP_08109385.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio sp. ND132] gi|323457405|gb|EGB13270.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio desulfuricans ND132] Length = 337 Score = 80.7 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 3/132 (2%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 +FA V V S +N E + ++ ++ + R + + R L Sbjct: 208 AVVFADVWKAVPVASRPMNRMERVTRDKVSFKRMNLAYNRDVWDGTGGPW---RMARTLG 264 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 V LS L +I RG V ++ + +S A+ +A G + V+NI + ++ Sbjct: 265 RGQVFTLSHLEPVPLIERGEMVNLVYNGRGIHLSIKAEAMGEAGAGQQVEVRNIQSNKII 324 Query: 138 SGSVVDTGTVRV 149 +VVD TV V Sbjct: 325 LATVVDGETVVV 336 >gi|300938637|ref|ZP_07153366.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] gi|300456422|gb|EFK19915.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 21-1] Length = 219 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 48/110 (43%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I GE L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|332527905|ref|ZP_08403941.1| flagella basal body P-ring formation protein FlgA [Rubrivivax benzoatilyticus JA2] gi|332112481|gb|EGJ12274.1| flagella basal body P-ring formation protein FlgA [Rubrivivax benzoatilyticus JA2] Length = 185 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 1/135 (0%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + V G VV + G VL +L +V + S++ + G R Sbjct: 51 VFLPITVEVWGPGVVAVTALAPGTVLAPGQLALGEVDWAAAATPPLASVQALEGRTLARP 110 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L P + L L + G V ++ +ST G AL G ++ V+ + G Sbjct: 111 LAPGQALRLDALKPREWFAAGEVVSVVARGDGYAVSTRGEALMRGVEGRLVRVR-TEAGR 169 Query: 136 MVSGSVVDTGTVRVV 150 +V+G G V V Sbjct: 170 IVTGWPTAEGRVDVA 184 >gi|222032825|emb|CAP75564.1| flagella basal body P-ring formation protein flgA [Escherichia coli LF82] gi|312945634|gb|ADR26461.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O83:H1 str. NRG 857C] Length = 219 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I GE L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + I G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRIKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|254299690|ref|ZP_04967139.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] gi|157809683|gb|EDO86853.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 406e] Length = 233 Score = 80.3 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + T +++ + + +G +RR Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133 L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++ Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207 Query: 134 GVMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226 >gi|149927794|ref|ZP_01916045.1| Flageller protein FlgA [Limnobacter sp. MED105] gi|149823416|gb|EDM82647.1| Flageller protein FlgA [Limnobacter sp. MED105] Length = 238 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 1/148 (0%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 VR S + V +V I +G+ L + ++ + S + + Sbjct: 92 VRVQCVGSDTAPFFVGVDVKVWAPVLVVKGTIQSGQTLGLNDVEFRTMDLSQLSHGWVSD 151 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + + R L P ++ L ++ G V++++ I +A+ +A +G Sbjct: 152 LAHLNNKTAARQLWPGTLLKHDYLRGQALVKNGDTVKVMMKGPGFAIGGTAVAMGEAELG 211 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +V+ +K G ++ G D V V + Sbjct: 212 EVVKIKTTQ-GKILHGVARDALLVEVSL 238 >gi|329296223|ref|ZP_08253559.1| flagellar basal body P-ring biosynthesis protein FlgA [Plautia stali symbiont] Length = 115 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%) Query: 37 AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 GE L+ L+ + + + + +VG V R L ++ L R + I +G Sbjct: 1 PGETLSADDLRSVSGDLAALPPGALLQQQALVGQVPLRALAAGQILTQGQLRRSWRIRQG 60 Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +V I+ + + G AL++A++G +AVK G V G V G + Sbjct: 61 EEVDIVAQGQGFRLRSKGKALNNAAVGQTLAVK-TAAGQRVQGVVSADGKI 110 >gi|167905086|ref|ZP_02492291.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei NCTC 13177] Length = 233 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + T +++ + + +G +RR Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133 L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++ Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207 Query: 134 GVMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226 >gi|167725926|ref|ZP_02409162.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei DM98] Length = 233 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + T +++ + + +G +RR Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133 L V+ +L P +I RG VRI+ G I GIA+ + DVI ++ Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQSGAQDDVIRLRVGTRRD 207 Query: 134 GVMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226 >gi|324007912|gb|EGB77131.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 57-2] Length = 240 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 48/110 (43%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I GE L +K + + I +V V+ R L PD Sbjct: 110 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGYGFSANAEGQALNNAAVAQNARVR 219 >gi|194432426|ref|ZP_03064713.1| flagella basal body P-ring formation protein FlgA [Shigella dysenteriae 1012] gi|194419313|gb|EDX35395.1| flagella basal body P-ring formation protein FlgA [Shigella dysenteriae 1012] Length = 240 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 110 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 169 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219 >gi|300918674|ref|ZP_07135255.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 115-1] gi|300414168|gb|EFJ97478.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 115-1] Length = 240 Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 110 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 169 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219 >gi|213616006|ref|ZP_03371832.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 135 Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 5 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 64 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +VSG Sbjct: 65 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSG 123 Query: 140 SVVDTGTVRV 149 +V G + + Sbjct: 124 TVDSDGNILI 133 >gi|167567746|ref|ZP_02360662.1| flagella basal body P-ring formation protein FlgA [Burkholderia oklahomensis EO147] gi|167574697|ref|ZP_02367571.1| flagella basal body P-ring formation protein FlgA [Burkholderia oklahomensis C6786] Length = 256 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 3/137 (2%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 A+V V + I A + + L + +++ + +D +G +R Sbjct: 110 APFRLIARATVKATVPVAARDIEARQPIVADDLADEPRDIASLT-DTVTRAEDAIGRSSR 168 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NI 131 R + ++ L P +I RG VR++ G I G+A+ DVI V+ Sbjct: 169 RAVHAGQILRRRHLQTPELIRRGQTVRVVARVGRAEIVNTGVAMQSGGKDDVIRVRVGGR 228 Query: 132 DTGVMVSGSVVDTGTVR 148 V + GT Sbjct: 229 SNHKTVDVRITAAGTAE 245 >gi|134280881|ref|ZP_01767591.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] gi|134247903|gb|EBA47987.1| flagella basal body P-ring formation protein FlgA [Burkholderia pseudomallei 305] Length = 233 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 3/139 (2%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + A V V + ++A E + L + +++ + + +G +RR Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRILTSLT-DTVTRADEAIGRTSRRS 147 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133 L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++ Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207 Query: 134 GVMVSGSVVDTGTVRVVVK 152 +V+ V GT + + Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226 >gi|331667472|ref|ZP_08368336.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] gi|331065057|gb|EGI36952.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA271] Length = 219 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|222823746|ref|YP_002575320.1| flagellar basal body P-ring formation protein FlgA, [Campylobacter lari RM2100] gi|222538968|gb|ACM64069.1| flagellar basal body P-ring formation protein FlgA, putative [Campylobacter lari RM2100] Length = 228 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 2/128 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + + I+ E L+ + K +++ ++ L+ + + + Sbjct: 101 FLKAKLEVLQSTRPISRNENLSPASFKILKIPFDKAPQGILK-KDEIANLIAKSNIRENM 159 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R V ++ G++++ AL ++ I +KN D G +V G Sbjct: 160 ILKYNMFKTKTLIQRNDSVYGVIKDGDLSMIIELKALQSGNLNQRIRLKNKD-GKVVHGK 218 Query: 141 VVDTGTVR 148 V+ V Sbjct: 219 VISKNYVE 226 >gi|16129035|ref|NP_415590.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K-12 substr. MG1655] gi|89107918|ref|AP_001698.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K-12 substr. W3110] gi|170080723|ref|YP_001730043.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K-12 substr. DH10B] gi|194438113|ref|ZP_03070206.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 101-1] gi|238900326|ref|YP_002926122.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli BW2952] gi|253773904|ref|YP_003036735.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161178|ref|YP_003044286.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli B str. REL606] gi|256023230|ref|ZP_05437095.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia sp. 4_1_40B] gi|297516831|ref|ZP_06935217.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli OP50] gi|300928376|ref|ZP_07143910.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 187-1] gi|300950167|ref|ZP_07164112.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 116-1] gi|300954388|ref|ZP_07166842.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 175-1] gi|301644984|ref|ZP_07244950.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|307137707|ref|ZP_07497063.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli H736] gi|331641616|ref|ZP_08342751.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H736] gi|2494513|sp|P75933|FLGA_ECOLI RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|1787312|gb|AAC74156.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K-12 substr. MG1655] gi|4062649|dbj|BAA35880.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K12 substr. W3110] gi|169888558|gb|ACB02265.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli str. K-12 substr. DH10B] gi|194423049|gb|EDX39043.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 101-1] gi|238860029|gb|ACR62027.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli BW2952] gi|242376876|emb|CAQ31593.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring [Escherichia coli BL21(DE3)] gi|253324948|gb|ACT29550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973079|gb|ACT38750.1| flagellar basal body P-ring biosynthesis protein A [Escherichia coli B str. REL606] gi|253977293|gb|ACT42963.1| flagellar basal body P-ring biosynthesis protein A [Escherichia coli BL21(DE3)] gi|260449788|gb|ACX40210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli DH1] gi|300318624|gb|EFJ68408.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 175-1] gi|300450514|gb|EFK14134.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 116-1] gi|300463634|gb|EFK27127.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 187-1] gi|301076713|gb|EFK91519.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 146-1] gi|309701344|emb|CBJ00645.1| flagellar basal body P-ring protein [Escherichia coli ETEC H10407] gi|315135704|dbj|BAJ42863.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli DH1] gi|315618242|gb|EFU98832.1| flagella basal body P-ring formation protein flgA [Escherichia coli 3431] gi|323937812|gb|EGB34076.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E1520] gi|323942541|gb|EGB38708.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E482] gi|323962671|gb|EGB58249.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H489] gi|331038414|gb|EGI10634.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H736] Length = 219 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|42522135|ref|NP_967515.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100] gi|39574666|emb|CAE78508.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100] Length = 310 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + +I GE + L+ + + ++D+ G + R L + S L R Sbjct: 191 VTTRLILQGERVQADDLRMSMTDVTFAKDGSL-RMEDIQGQMAARSLPVGSTVWASDLKR 249 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +G V+ +L + IS +A +GD+I VKN++T ++SG V + G V+ Sbjct: 250 EPAAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVLSGLVTEKGVVK 308 >gi|157160599|ref|YP_001457917.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli HS] gi|170020532|ref|YP_001725486.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli ATCC 8739] gi|157066279|gb|ABV05534.1| flagella basal body P-ring formation protein FlgA [Escherichia coli HS] gi|169755460|gb|ACA78159.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ATCC 8739] Length = 219 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|323973339|gb|EGB68528.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA007] Length = 209 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|331672592|ref|ZP_08373381.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA280] gi|331070235|gb|EGI41601.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA280] Length = 240 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 110 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219 >gi|87306344|ref|ZP_01088491.1| putative flagella basal body P-ring formation protein [Blastopirellula marina DSM 3645] gi|87290523|gb|EAQ82410.1| putative flagella basal body P-ring formation protein [Blastopirellula marina DSM 3645] Length = 287 Score = 78.4 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 45/111 (40%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A V I GEV+ L + G++ I+ +VG R L Sbjct: 134 AEGETLVVHTVRPIRRGEVIQAEDLTVQPLNTVRTDGDFETRIESLVGKEAIRSLPAQRP 193 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 I + P VI + V +I G + I IA SDAS+GD++ V+ I Sbjct: 194 IESGSIREPVVIQQNDVVTVIAQIGGLVIRRDAIAASDASVGDLLMVQAIS 244 >gi|227886570|ref|ZP_04004375.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 83972] gi|300974376|ref|ZP_07172588.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 45-1] gi|301051144|ref|ZP_07197974.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 185-1] gi|227836774|gb|EEJ47240.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 83972] gi|300297165|gb|EFJ53550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 185-1] gi|300410619|gb|EFJ94157.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 45-1] gi|307553074|gb|ADN45849.1| flagella basal body P-ring formation protein FlgA [Escherichia coli ABU 83972] gi|315291066|gb|EFU50429.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 153-1] Length = 240 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 49/110 (44%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I GE L +K + + I +V V+ R L PD Sbjct: 110 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 169 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + ++ + G AL++A++ V+ Sbjct: 170 QPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 219 >gi|323174800|gb|EFZ60415.1| flagella basal body P-ring formation protein flgA [Escherichia coli LT-68] Length = 212 Score = 78.0 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 82 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 141 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 142 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 191 >gi|110805090|ref|YP_688610.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella flexneri 5 str. 8401] gi|331652125|ref|ZP_08353144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli M718] gi|110614638|gb|ABF03305.1| Flagellar basal body P-ring biosynthesis protein [Shigella flexneri 5 str. 8401] gi|331050403|gb|EGI22461.1| flagella basal body P-ring formation protein FlgA [Escherichia coli M718] Length = 219 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|191168474|ref|ZP_03030262.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B7A] gi|190901493|gb|EDV61254.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B7A] Length = 219 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 4/132 (3%) Query: 2 DCVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57 + + L D+ + V G+ VV ++ I G L +K + + Sbjct: 67 NSRLWGNVNVLARCGNDTRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLP 126 Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117 I +V ++ R L PD I L+ + + + G +V +I + + + G AL Sbjct: 127 PRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQAL 186 Query: 118 SDASIGDVIAVK 129 ++A++ V+ Sbjct: 187 NNAAVAQNARVR 198 >gi|307310150|ref|ZP_07589800.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|306909868|gb|EFN40362.1| flagella basal body P-ring formation protein FlgA [Escherichia coli W] gi|315060350|gb|ADT74677.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli W] gi|323379089|gb|ADX51357.1| flagella basal body P-ring formation protein FlgA [Escherichia coli KO11] Length = 219 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|293409438|ref|ZP_06653014.1| flagella basal body P-ring formation protein flgA [Escherichia coli B354] gi|331662478|ref|ZP_08363401.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA143] gi|331682574|ref|ZP_08383193.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H299] gi|284920895|emb|CBG33958.1| flagellar basal body P-ring protein [Escherichia coli 042] gi|291469906|gb|EFF12390.1| flagella basal body P-ring formation protein flgA [Escherichia coli B354] gi|331060900|gb|EGI32864.1| flagella basal body P-ring formation protein FlgA [Escherichia coli TA143] gi|331080205|gb|EGI51384.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H299] Length = 219 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|218704480|ref|YP_002411999.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli UMN026] gi|293404356|ref|ZP_06648350.1| flgA [Escherichia coli FVEC1412] gi|298380136|ref|ZP_06989741.1| flagella basal body P-ring formation protein FlgA [Escherichia coli FVEC1302] gi|300899591|ref|ZP_07117830.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] gi|218431577|emb|CAR12456.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli UMN026] gi|291428942|gb|EFF01967.1| flgA [Escherichia coli FVEC1412] gi|298279834|gb|EFI21342.1| flagella basal body P-ring formation protein FlgA [Escherichia coli FVEC1302] gi|300356862|gb|EFJ72732.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 198-1] Length = 219 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|320200967|gb|EFW75551.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia coli EC4100B] Length = 219 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|157158222|ref|YP_001462306.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli E24377A] gi|193064598|ref|ZP_03045678.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E22] gi|193069445|ref|ZP_03050399.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E110019] gi|194428442|ref|ZP_03060982.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B171] gi|209918326|ref|YP_002292410.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli SE11] gi|218553651|ref|YP_002386564.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli IAI1] gi|218694606|ref|YP_002402273.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli 55989] gi|256018671|ref|ZP_05432536.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp. D9] gi|260843312|ref|YP_003221090.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O103:H2 str. 12009] gi|260854555|ref|YP_003228446.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O26:H11 str. 11368] gi|260867435|ref|YP_003233837.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O111:H- str. 11128] gi|293433362|ref|ZP_06661790.1| flagella basal body P-ring formation protein flgA [Escherichia coli B088] gi|300816774|ref|ZP_07096994.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] gi|300821147|ref|ZP_07101296.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 119-7] gi|300922598|ref|ZP_07138698.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 182-1] gi|301328558|ref|ZP_07221619.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 78-1] gi|309798066|ref|ZP_07692441.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 145-7] gi|331676863|ref|ZP_08377559.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H591] gi|332279740|ref|ZP_08392153.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp. D9] gi|157080252|gb|ABV19960.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E24377A] gi|192927850|gb|EDV82464.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E22] gi|192957193|gb|EDV87642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E110019] gi|194413494|gb|EDX29776.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B171] gi|209911585|dbj|BAG76659.1| flagellar basal body P-ring protein FlgA precursor [Escherichia coli SE11] gi|218351338|emb|CAU97044.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli 55989] gi|218360419|emb|CAQ97971.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli IAI1] gi|257753204|dbj|BAI24706.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O26:H11 str. 11368] gi|257758459|dbj|BAI29956.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O103:H2 str. 12009] gi|257763791|dbj|BAI35286.1| assembly protein FlgA for flagellar basal-body periplasmic P ring [Escherichia coli O111:H- str. 11128] gi|291324181|gb|EFE63603.1| flagella basal body P-ring formation protein flgA [Escherichia coli B088] gi|300421075|gb|EFK04386.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 182-1] gi|300526446|gb|EFK47515.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 119-7] gi|300530548|gb|EFK51610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 107-1] gi|300844950|gb|EFK72710.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 78-1] gi|308118349|gb|EFO55611.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 145-7] gi|323156879|gb|EFZ43013.1| flagella basal body P-ring formation protein flgA [Escherichia coli EPECa14] gi|323185805|gb|EFZ71166.1| flagella basal body P-ring formation protein flgA [Escherichia coli 1357] gi|323947626|gb|EGB43630.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H120] gi|324017424|gb|EGB86643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 117-3] gi|324117357|gb|EGC11264.1| flagella basal body P-ring formation protein FlgA [Escherichia coli E1167] gi|331075552|gb|EGI46850.1| flagella basal body P-ring formation protein FlgA [Escherichia coli H591] gi|332102092|gb|EGJ05438.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp. D9] Length = 219 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|254459586|ref|ZP_05073002.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales bacterium HTCC2083] gi|206676175|gb|EDZ40662.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae bacterium HTCC2083] Length = 245 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 1/127 (0%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 AV + +N G+ L S ++ + + YA S VVG V + L P + Sbjct: 117 AEAVYLKLPMNKGDRLKLSDVELRPIERLSSESVYA-SPDQVVGRVLGQSLTPSIAVMPR 175 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 L R + + + I + +G + + + G+AL +GD I V+N+ + ++ G ++ Sbjct: 176 HLAREWSVQEEDILSIYIVRGGIEVVSTGVALQPGQLGDTIHVENLSSETVLIGRIIGEK 235 Query: 146 TVRVVVK 152 V ++ K Sbjct: 236 KVEIIAK 242 >gi|26247212|ref|NP_753252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli CFT073] gi|26107613|gb|AAN79812.1|AE016759_86 Flagella basal body P-ring formation protein flgA precursor [Escherichia coli CFT073] Length = 219 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 49/110 (44%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I GE L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + ++ + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 198 >gi|188494240|ref|ZP_03001510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] gi|188489439|gb|EDU64542.1| flagella basal body P-ring formation protein FlgA [Escherichia coli 53638] Length = 219 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|301029714|ref|ZP_07192768.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 196-1] gi|312971208|ref|ZP_07785386.1| flagella basal body P-ring formation protein flgA [Escherichia coli 1827-70] gi|299877402|gb|EFI85613.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 196-1] gi|310336410|gb|EFQ01596.1| flagella basal body P-ring formation protein flgA [Escherichia coli 1827-70] gi|332092907|gb|EGI97975.1| flagella basal body P-ring formation protein flgA [Shigella dysenteriae 155-74] gi|332342617|gb|AEE55951.1| flagellar basal body P-ring formation protein FlgA [Escherichia coli UMNK88] Length = 156 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 26 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135 >gi|293414367|ref|ZP_06657016.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B185] gi|291434425|gb|EFF07398.1| flagella basal body P-ring formation protein FlgA [Escherichia coli B185] Length = 219 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++AS+ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNASVAQNARVR 198 >gi|15801189|ref|NP_287206.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 EDL933] gi|15830704|ref|NP_309477.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. Sakai] gi|168747152|ref|ZP_02772174.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4113] gi|168758636|ref|ZP_02783643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4401] gi|168764484|ref|ZP_02789491.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4501] gi|168767731|ref|ZP_02792738.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4486] gi|168773917|ref|ZP_02798924.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4196] gi|168783602|ref|ZP_02808609.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4076] gi|168790007|ref|ZP_02815014.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC869] gi|168802017|ref|ZP_02827024.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC508] gi|195935462|ref|ZP_03080844.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. EC4024] gi|208805981|ref|ZP_03248318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4206] gi|208816357|ref|ZP_03257536.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4045] gi|208822785|ref|ZP_03263104.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4042] gi|209398728|ref|YP_002269918.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4115] gi|217328503|ref|ZP_03444585.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. TW14588] gi|254792454|ref|YP_003077291.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. TW14359] gi|261227023|ref|ZP_05941304.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. FRIK2000] gi|261256257|ref|ZP_05948790.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. FRIK966] gi|291282092|ref|YP_003498910.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615] gi|12514610|gb|AAG55818.1|AE005317_7 flagellar biosynthesis; assembly of basal-body periplasmic P ring [Escherichia coli O157:H7 str. EDL933] gi|13360914|dbj|BAB34873.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. Sakai] gi|187770424|gb|EDU34268.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4196] gi|188018189|gb|EDU56311.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4113] gi|188999053|gb|EDU68039.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4076] gi|189354582|gb|EDU73001.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4401] gi|189363110|gb|EDU81529.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4486] gi|189365539|gb|EDU83955.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4501] gi|189370501|gb|EDU88917.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC869] gi|189375925|gb|EDU94341.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC508] gi|208725782|gb|EDZ75383.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4206] gi|208733005|gb|EDZ81693.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4045] gi|208738270|gb|EDZ85953.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4042] gi|209160128|gb|ACI37561.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC4115] gi|209773418|gb|ACI85021.1| flagella basal body P-ring formation protein FlgA [Escherichia coli] gi|209773420|gb|ACI85022.1| flagella basal body P-ring formation protein FlgA [Escherichia coli] gi|209773422|gb|ACI85023.1| flagella basal body P-ring formation protein FlgA [Escherichia coli] gi|209773424|gb|ACI85024.1| flagella basal body P-ring formation protein FlgA [Escherichia coli] gi|209773426|gb|ACI85025.1| flagella basal body P-ring formation protein FlgA [Escherichia coli] gi|217318930|gb|EEC27356.1| flagella basal body P-ring formation protein FlgA [Escherichia coli O157:H7 str. TW14588] gi|254591854|gb|ACT71215.1| assembly protein for flagellar basal-body periplasmic P ring [Escherichia coli O157:H7 str. TW14359] gi|290761965|gb|ADD55926.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615] gi|320189754|gb|EFW64410.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia coli O157:H7 str. EC1212] gi|320637523|gb|EFX07323.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. G5101] gi|320643084|gb|EFX12285.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H- str. 493-89] gi|320648542|gb|EFX17197.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H- str. H 2687] gi|320653856|gb|EFX21930.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659336|gb|EFX26905.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O55:H7 str. USDA 5905] gi|320664471|gb|EFX31622.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli O157:H7 str. LSU-61] gi|326339294|gb|EGD63108.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia coli O157:H7 str. 1125] gi|326344746|gb|EGD68494.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia coli O157:H7 str. 1044] Length = 219 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|218677622|ref|ZP_03525519.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli CIAT 894] Length = 66 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 44/66 (66%) Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + Y ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ GT Sbjct: 1 MREAYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLADGT 60 Query: 147 VRVVVK 152 + V K Sbjct: 61 IHVRAK 66 >gi|187730893|ref|YP_001880756.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella boydii CDC 3083-94] gi|187427885|gb|ACD07159.1| flagella basal body P-ring formation protein FlgA [Shigella boydii CDC 3083-94] Length = 219 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|300902463|ref|ZP_07120445.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 84-1] gi|301304989|ref|ZP_07211091.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 124-1] gi|300405495|gb|EFJ89033.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 84-1] gi|300839707|gb|EFK67467.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 124-1] gi|315253873|gb|EFU33841.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 85-1] Length = 219 Score = 77.2 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|170681963|ref|YP_001744109.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia coli SMS-3-5] gi|170519681|gb|ACB17859.1| flagella basal body P-ring formation protein FlgA [Escherichia coli SMS-3-5] Length = 219 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R + PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDISPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|213585153|ref|ZP_03366979.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 117 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 + G L + + + + I+ + V+ R L P + L+++ + + + Sbjct: 1 PVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRV 60 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 G +V++I +++ G A+++A++ V+ + +G +VSG+V G + + Sbjct: 61 KAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSGTVDSDGNILI 115 >gi|74311634|ref|YP_310053.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sonnei Ss046] gi|73855111|gb|AAZ87818.1| flagellar protein for assembly of basal-body periplasmic P ring [Shigella sonnei Ss046] Length = 219 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVTQNARVR 198 >gi|333008272|gb|EGK27746.1| flagella basal body P-ring formation protein flgA [Shigella flexneri K-272] gi|333019762|gb|EGK39034.1| flagella basal body P-ring formation protein flgA [Shigella flexneri K-227] Length = 156 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEADNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135 >gi|183220920|ref|YP_001838916.1| flagellar protein FlgAide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911016|ref|YP_001962571.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775692|gb|ABZ93993.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779342|gb|ABZ97640.1| Flagellar protein FlgA; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 313 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 2/119 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A I + +L + ++ +++ Y ++ VG LPD I + Sbjct: 191 AYFTKREIPSKTILTDEDVEVRSFFSADSLREYTD--ENPVGKTALNGFLPDTAIEKKQV 248 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + I RG +V ++ T GN+ + AL+ + G+ I + N+ + + V + G Sbjct: 249 RTLHTIERGQEVELVYTVGNLLLKIKTRALASGNRGEEIPLLNLASQKTIRARVQNEGV 307 >gi|333005620|gb|EGK25138.1| flagella basal body P-ring formation protein flgA [Shigella flexneri K-218] Length = 159 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 29 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 88 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 89 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 138 >gi|320173524|gb|EFW48720.1| Flagellar basal-body P-ring formation protein FlgA [Shigella dysenteriae CDC 74-1112] Length = 156 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135 >gi|323190583|gb|EFZ75855.1| flagella basal body P-ring formation protein flgA [Escherichia coli RN587/1] gi|333004879|gb|EGK24399.1| flagella basal body P-ring formation protein flgA [Shigella flexneri VA-6] Length = 156 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135 >gi|323163753|gb|EFZ49572.1| flagella basal body P-ring formation protein flgA [Escherichia coli E128010] gi|323175698|gb|EFZ61292.1| flagella basal body P-ring formation protein flgA [Escherichia coli 1180] Length = 156 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135 >gi|329898293|ref|ZP_08272376.1| flagellar protein [gamma proteobacterium IMCC3088] gi|328920858|gb|EGG28301.1| flagellar protein [gamma proteobacterium IMCC3088] Length = 316 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + ++ + I G+ L+ + + +V L T R L + S Sbjct: 193 YVLISNGSITRGQRLSPELFTP-TIQTEQAPKDALLQGVEVKHLETTRDLTSGEYLRKSN 251 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + +G + + + +G ++I+ A IG+VI ++NID+G +V G VVD G Sbjct: 252 TKPTLAVRKGEILTLSIVRGMISITAQVRASEGGKIGEVIELENIDSGNLVLGMVVDIGK 311 Query: 147 VR 148 V Sbjct: 312 VE 313 Score = 37.5 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 ++ G+ L+ + E Q N ++G+ I DV+G +R + +V+ + Sbjct: 120 RNLSEGDTLSRGDV-ERQAINHKLKGDMVTHIADVIGRSLKRSVKASNVVMVEDYEE 175 >gi|256830175|ref|YP_003158903.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium baculatum DSM 4028] gi|256579351|gb|ACU90487.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium baculatum DSM 4028] Length = 316 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 ++FA V + V+N G++L + + + + + + + Sbjct: 187 TVFADVWKTVPCAARVLNRGDMLEPGLVGFARKNLAYMAREPWDGRNLPLRMTA--AVGE 244 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 VI + V+++G + +I + ++ +L D IG+ I V+N+ + +V+ Sbjct: 245 GQVISADAVEFIPVVAKGQILTLIYAGQTLKLTVPVESLEDGGIGNTIRVRNMQSRRVVA 304 Query: 139 GSVVDTGTVRV 149 VVD TVRV Sbjct: 305 AQVVDAETVRV 315 >gi|323165579|gb|EFZ51366.1| flagella basal body P-ring formation protein flgA [Shigella sonnei 53G] Length = 156 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 26 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLSPD 85 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 86 QPIQLTQFRQAWRVKAGQRVNVIASGNGFSANAEGQALNNAAVTQNARVR 135 >gi|332758229|gb|EGJ88552.1| flagella basal body P-ring formation protein flgA [Shigella flexneri 4343-70] Length = 146 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 16 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 75 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 76 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 125 >gi|126734108|ref|ZP_01749855.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. CCS2] gi|126716974|gb|EBA13838.1| putative flagellar basal-body P-ring formation protein FlgA [Roseobacter sp. CCS2] Length = 138 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 4/124 (3%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 + VV + I A V+ + + N + + ++G+ R L Sbjct: 13 SPAAAETVVAARTIRAQSVITVDDI----IINEETTAAAIDAARAIIGMEARVALFVGRP 68 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 I + +P V+ R + ++ + + IST G AL A G+VI V N+ + VS + Sbjct: 69 ILPGDVGQPAVVERNQIIPLLFEKNGLVISTDGRALGRAGPGEVIRVMNVGSRATVSAMI 128 Query: 142 VDTG 145 + G Sbjct: 129 GNDG 132 >gi|323967013|gb|EGB62439.1| flagella basal body P-ring formation protein FlgA [Escherichia coli M863] gi|327253471|gb|EGE65109.1| flagella basal body P-ring formation protein flgA [Escherichia coli STEC_7v] Length = 219 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 48/110 (43%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I ++ V+ R L P+ Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLIDAVSLRDLSPE 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ L + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QPIQLTQLRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|82544462|ref|YP_408409.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella boydii Sb227] gi|81245873|gb|ABB66581.1| assembly of basal-body periplasmic P ring [Shigella boydii Sb227] gi|320186982|gb|EFW61695.1| Flagellar basal-body P-ring formation protein FlgA [Shigella flexneri CDC 796-83] gi|332094040|gb|EGI99092.1| flagella basal body P-ring formation protein flgA [Shigella boydii 3594-74] Length = 219 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ ++ Sbjct: 149 QPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMR 198 >gi|301023259|ref|ZP_07187056.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 69-1] gi|300397104|gb|EFJ80642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli MS 69-1] Length = 219 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|315638956|ref|ZP_07894127.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter upsaliensis JV21] gi|315480985|gb|EFU71618.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter upsaliensis JV21] Length = 220 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 2/116 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + I G+ + K + + + N S +D+ L+ + + + ++ ++ Sbjct: 104 TRAIKRGDRIGAFDYKIVMMDFDKVPSNAL-SKEDLNNLLAKNNISKNTILRQNMFKTTA 162 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +I R +V +L + + ++L A++G+ I VK+ D G ++ G V+ V Sbjct: 163 IIKRNDQVIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGIVMGKNRV 217 >gi|269792756|ref|YP_003317660.1| flagella basal body P-ring formation protein FlgA [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100391|gb|ACZ19378.1| flagella basal body P-ring formation protein FlgA [Thermanaerovibrio acidaminovorans DSM 6589] Length = 280 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V+ V+ G+V++ R+ S+ +V+G R + V+ S Sbjct: 154 PVVLARDVMKRGDVVSWERVVLGLGEKRGF-EELPSSVDEVLGRRVRTPVRAWAVLRGSW 212 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 L + G V ++ G +++S G ++ +GD + V N+ T +V+G V G Sbjct: 213 LEGSSGVLGGQTVELVCRVGGVSVSAVGRSVDGGRVGDRVRVMNVQTRAIVTGVVEAPGV 272 Query: 147 VRV 149 VRV Sbjct: 273 VRV 275 >gi|320179229|gb|EFW54187.1| Flagellar basal-body P-ring formation protein FlgA [Shigella boydii ATCC 9905] Length = 219 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V ++ R L PD Sbjct: 89 VNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ + Sbjct: 149 QPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARGR 198 >gi|296534162|ref|ZP_06896655.1| flagella basal body P-ring formation protein FlgA [Roseomonas cervicalis ATCC 49957] gi|296265508|gb|EFH11640.1| flagella basal body P-ring formation protein FlgA [Roseomonas cervicalis ATCC 49957] Length = 107 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 44/84 (52%) Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 V+G R L +PLS L + + R + V+++ ++++T+G AL D ++G Sbjct: 1 DAVLGRRIGRPLGAGQPVPLSELSAQHAVRRDSVVQLVHEASGLSLTTSGRALEDGALGA 60 Query: 125 VIAVKNIDTGVMVSGSVVDTGTVR 148 I + N+ G ++ G V+ G VR Sbjct: 61 TITILNLSNGAVLLGEVLAPGRVR 84 >gi|283850808|ref|ZP_06368094.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio sp. FW1012B] gi|283573731|gb|EFC21705.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio sp. FW1012B] Length = 325 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 4/126 (3%) Query: 26 GHAVVPSVVINA--GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V I G + +S + + I+G RR + VI Sbjct: 201 ARVPVAIKPIMPKDGAAVEQSAYVYERRNMAGIKGRIFEPGDSQ--WRARRGVGAGQVIM 258 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + ++ RG +V+++ ++ ++ G ALSD + G I VKN + ++G V D Sbjct: 259 ADEMEPMPLVLRGDQVKVVYEGRSLRLTLLGEALSDGAPGGRITVKNPKSTREITGIVRD 318 Query: 144 TGTVRV 149 TV V Sbjct: 319 RSTVVV 324 >gi|319944139|ref|ZP_08018417.1| flagella basal body P-ring formation protein FlgA [Lautropia mirabilis ATCC 51599] gi|319742633|gb|EFV95042.1| flagella basal body P-ring formation protein FlgA [Lautropia mirabilis ATCC 51599] Length = 312 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 2/127 (1%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V G A+V + AG V + +V + + G +R L + Sbjct: 186 HVEGPALVARQQLAAGSVPQPADFSVQRVDWTRSPTPPLPIDTRLGGQELQRALAAGQSL 245 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 L I G V I I+T IAL+ A G I V+ G ++SG V Sbjct: 246 HADHLRPAPSIRSGEVVAAIAEGDGFRIATDAIALASAGEGQSIRVR-TPGGKVLSGLVE 304 Query: 143 DTGTVRV 149 TV++ Sbjct: 305 GK-TVKI 310 >gi|21672600|ref|NP_660667.1| flagella basal body P-ring formation protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008461|sp|Q8K9L0|FLGA_BUCAP RecName: Full=Flagella basal body P-ring formation protein flgA; Flags: Precursor gi|21623231|gb|AAM67878.1| flagella basal body P-ring formation protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 222 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 50/132 (37%), Gaps = 1/132 (0%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G V+ I G + L ++ + + KD++ V R + P Sbjct: 92 VELQAEGEYVIAKKKILRGTKIRGDDLIKVVGRLDTLPRGAYLNEKDLINRVNLRDIFPF 151 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I + +++ V + + + + G +LS+ + I V+ + G +++G Sbjct: 152 QPITSFMTRPYWLVKMNQLVTVKMKGVDFEVIFVGKSLSNGAERQKIRVQ-LKNGKVLTG 210 Query: 140 SVVDTGTVRVVV 151 + + V V + Sbjct: 211 VINNNSEVIVFL 222 >gi|291288378|ref|YP_003505194.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio acetiphilus DSM 12809] gi|290885538|gb|ADD69238.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio acetiphilus DSM 12809] Length = 285 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 6/122 (4%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV-L 87 V S I GE ++ R+++ + S + G G++ + L + L + Sbjct: 166 YVTSSSIRKGEDVS-GRVQKERYELSRVHGEPVKDPS---GMIATKNLSSGRPLTLGDVM 221 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +P G V ++ G + ++T+G DA IG + VKN +G +V G V Sbjct: 222 MKPDAFE-GTTVLLVYRSGALNVTTSGELQEDAYIGKNVRVKNTASGKIVRGRYEQGRKV 280 Query: 148 RV 149 V Sbjct: 281 VV 282 >gi|327398887|ref|YP_004339756.1| flagella basal body P-ring formation protein FlgA [Hippea maritima DSM 10411] gi|327181516|gb|AEA33697.1| flagella basal body P-ring formation protein FlgA [Hippea maritima DSM 10411] Length = 295 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 2/120 (1%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + I +G ++ + T+ + Y + ++ V + LS R Sbjct: 177 VAAKDIESGSIITPDDITFK--TSDRVLSTYLTNKPSIINRVAISFIKKGSPFTLSNTKR 234 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G V++++ GN+ I T AL ++I + + + + ++ V V Sbjct: 235 FRPVKVGDIVKVMVISGNIVIRTTAKALRGGYKDEIIPIMYLSSKRVFPAKIIGKKEVLV 294 >gi|170768237|ref|ZP_02902690.1| flagella basal body P-ring formation protein FlgA [Escherichia albertii TW07627] gi|170123003|gb|EDS91934.1| flagella basal body P-ring formation protein FlgA [Escherichia albertii TW07627] Length = 219 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 46/110 (41%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + + + V+ R L PD Sbjct: 89 VNVQATGNYVVAAMPIMRGGKLEADSVKLKRGRLDTLPPRTVLDVNQLADAVSLRDLSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L +L + + + G +V +I + + + G AL++A + V+ Sbjct: 149 QPIQLPLLRQVWRVKAGQRVNVIASGDGFSANAEGQALNNAGVAQNARVR 198 >gi|57505378|ref|ZP_00371306.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis RM3195] gi|57016203|gb|EAL52989.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis RM3195] Length = 220 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 2/116 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + I G+ + K + + + N S +D+ L+ + + + ++ ++ Sbjct: 104 TRAIKRGDKIGAFDYKIVMMDFDKVPNNAL-SKEDLNNLLAKNNISKNTILRQNMFKTTA 162 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +I R ++ +L + + ++L A++G+ I VK+ D G ++ G VV V Sbjct: 163 IIKRNDQIIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGIVVGKNRV 217 >gi|329888227|ref|ZP_08266825.1| flagella basal body P-ring formation protein FlgA [Brevundimonas diminuta ATCC 11568] gi|328846783|gb|EGF96345.1| flagella basal body P-ring formation protein FlgA [Brevundimonas diminuta ATCC 11568] Length = 121 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 37/99 (37%) Query: 48 EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107 V + + V+GL +R L + L P VI+R V + Sbjct: 3 WASVQSHLAPAGGPQDAEAVIGLQAKRALRAGSPVGPRDLASPQVIARNDMVEVAYINDG 62 Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + ++ G A +AS G+ + + N+ + + V G Sbjct: 63 VELTVTGKATRNASAGEAVPILNVQSNRTIDAVAVAPGR 101 >gi|218460754|ref|ZP_03500845.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli Kim 5] Length = 95 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 46/63 (73%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I Sbjct: 31 AGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTI 90 Query: 83 PLS 85 +S Sbjct: 91 AVS 93 >gi|255322186|ref|ZP_05363332.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter showae RM3277] gi|255300559|gb|EET79830.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter showae RM3277] Length = 268 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 S++ S V+ + + ++L + V + + L Sbjct: 135 SVFFRYEVSAKMPVLR----ATKPLTTRQMLGIDDFAKDWVELDEFSPDMMSEAPNAR-L 189 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 T++ + V+ L +I +G +V +L+ G ++I AL + ++G+ I VKN Sbjct: 190 ATKQNIKSGEVLRLRQFTPLPLIKKGERVNAVLSDGALSIIVEVTALENGNLGETIKVKN 249 Query: 131 IDTGVMVSGSVVDTGTVRV 149 D + S +V V + Sbjct: 250 ND-KKVFSAQIVSKKQVMI 267 >gi|157415040|ref|YP_001482296.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. jejuni 81116] gi|157386004|gb|ABV52319.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931184|gb|EFV10156.1| flagella basal body P-ring formation protein FlgA [Campylobacter jejuni subsp. jejuni 327] Length = 220 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV LV + + + Sbjct: 93 FIQANLEVLKSERTIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|90415322|ref|ZP_01223256.1| flagellar protein [marine gamma proteobacterium HTCC2207] gi|90332645|gb|EAS47815.1| flagellar protein [marine gamma proteobacterium HTCC2207] Length = 400 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 1/121 (0%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +V I G+ + + + N+ + + R L ++ LS L Sbjct: 274 VLVTQFGIARGQAVTRANIAMQDYY-GNLPQDSLQDYSSAERMQAIRNLPAGSLLRLSDL 332 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 +I +G V+++L G + I+ A AL DA + + + N D+G + G Sbjct: 333 TPVNIIRKGDNVQLVLRVGALEITVAMQALEDARMDQRVLLLNPDSGEEIQAIAAGVGRA 392 Query: 148 R 148 R Sbjct: 393 R 393 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR-- 89 + + AG ++ + +K + + +SN+ G+ S+ + G R L D ++ + Sbjct: 213 TRSVVAGGTISGNDIKVVMLPSSNVPGSQILSLDQINGARAARNLTVDKILSSYDIKEKH 272 Query: 90 PYVIS-----RGAKVR 100 +++ RG V Sbjct: 273 QVLVTQFGIARGQAVT 288 >gi|82777314|ref|YP_403663.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella dysenteriae Sd197] gi|81241462|gb|ABB62172.1| assembly of basal-body periplasmic P ring [Shigella dysenteriae Sd197] Length = 219 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 46/110 (41%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ VV ++ I G L +K + + I +V V+ R PD Sbjct: 89 VNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPSPD 148 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 I L+ + + + G +V +I + + + G AL++A++ V+ Sbjct: 149 QSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198 >gi|307747679|gb|ADN90949.1| Flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni M1] Length = 220 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 2/127 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV LV + + + Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGTV 147 VV + Sbjct: 211 VVGKNRI 217 >gi|220932493|ref|YP_002509401.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix orenii H 168] gi|219993803|gb|ACL70406.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix orenii H 168] Length = 336 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD--VVGLVTRRVLLPDHVIPL 84 +V + I G + + L + +RG + D + + + L ++ Sbjct: 210 KVLVATRNIKRGSNICKEDLALTTEKITGVRGEIINDFNDPRLSYSIVKIPLQKGEILTT 269 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 L +P VI G V + N+ +ST+ AL +GD + V N +TG V+++ Sbjct: 270 DHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETGYEFKARVINS 329 Query: 145 GTVRVV 150 VRVV Sbjct: 330 RLVRVV 335 >gi|188997556|ref|YP_001931807.1| Flagellar basal body P-ring biosynthesis protein-like protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932623|gb|ACD67253.1| Flagellar basal body P-ring biosynthesis protein-like protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 170 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + KV I+ N+ I G+AL + GD I VKNI TG + G V+ TV + Sbjct: 107 WAVVKNQKVSIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTVLIE 166 Query: 151 V 151 Sbjct: 167 A 167 >gi|154173812|ref|YP_001408259.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter curvus 525.92] gi|112802783|gb|EAU00127.1| putative flagella basal body P-ring formation protein FlgA [Campylobacter curvus 525.92] Length = 268 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 2/121 (1%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + I +L+ + + + + + S+ LV R + V+ Sbjct: 147 PVFIAINKIEHNHILSLTDYQSNYIEFEKYQKDMFSSMPSSR-LVARTAIKAGEVLSQRQ 205 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 ++ RG + +L G +++ AL D ++GD+I ++ D ++ SV Sbjct: 206 FSAMSLVKRGDILNAVLNDGGLSVIVEVRALEDGNLGDIIKIRTKD-NKILPASVSGKNQ 264 Query: 147 V 147 V Sbjct: 265 V 265 >gi|332296515|ref|YP_004438438.1| flagella basal body P-ring formation protein FlgA [Thermodesulfobium narugense DSM 14796] gi|332179618|gb|AEE15307.1| flagella basal body P-ring formation protein FlgA [Thermodesulfobium narugense DSM 14796] Length = 225 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%) Query: 27 HAVVPSVVINAGEVLNESR-LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 + V V + AG V+N + + + + S + ++A ++ G + VI L Sbjct: 101 NVYVAKVPLKAGSVINVNDNVVKDERELSTLPKDFAID-DNINGSTLNANIAMGQVIRLG 159 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 ++ + I G +V ++ GN T S +ALS SIGD I V+ I + G ++ + Sbjct: 160 LISKRIDIRLGQRVIVVGKVGNATFSLPAVALSSGSIGDDIKVRCITNNKVFIGKIISSS 219 Query: 146 TVRV 149 V+ Sbjct: 220 EVQT 223 >gi|283954337|ref|ZP_06371858.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 414] gi|283794136|gb|EFC32884.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 414] Length = 220 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV L+ + + + Sbjct: 93 FIQANLEVLKSERAIKRGDKLGTFDYKSVLIDFDKVPSNALT-LDDVNNLIAKSNINKNT 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ I +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDILIELVALQSANMGERIRAKNKE-GRVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|254438146|ref|ZP_05051640.1| SAF domain family [Octadecabacter antarcticus 307] gi|198253592|gb|EDY77906.1| SAF domain family [Octadecabacter antarcticus 307] Length = 224 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 5/138 (3%) Query: 4 VRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 V + + V +L AV + G+ + L+ + + Sbjct: 74 VTWSILVRAQVQGAIALIPEASQGYTTQAVFLRRPLRGGDRIQVEDLELRPI-APLSSSS 132 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 ++++DVVG V + L P + L R + + G V + + +G I T G+AL Sbjct: 133 VYNALEDVVGRVLVQSLSPRVPVMPRHLERDWAVDLGDVVSLRVVRGGTEIETFGVALES 192 Query: 120 ASIGDVIAVKNIDTGVMV 137 IGD I ++N +G + Sbjct: 193 GQIGDKIRIENRSSGREL 210 >gi|32266858|ref|NP_860890.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter hepaticus ATCC 51449] gi|32262910|gb|AAP77956.1| hypothetical protein HH_1359 [Helicobacter hepaticus ATCC 51449] Length = 305 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + IN + L + ++T + Y S +++ + + D I + Sbjct: 188 TQNINVNDTLTPQNTRAERITFERVGAEYI-STQEIYNSGAKSYIRVDTAITKDKIKPRI 246 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++ +G K+R+ +G +T +A +A ++I +N ++G ++ + D G ++ Sbjct: 247 IVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL 305 >gi|182412220|ref|YP_001817286.1| flagellar basal body P-ring biosynthesis protein-like protein [Opitutus terrae PB90-1] gi|177839434|gb|ACB73686.1| Flagellar basal body P-ring biosynthesis protein-like protein [Opitutus terrae PB90-1] Length = 233 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 11 SLYVLSLDSLFASVIGHAVVPSV-VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 S+ V + + + V + + + + L +V R + VG Sbjct: 93 SIAVADATLVLRAALWRDVWAARQPLAKDSTFDPAVLDTRRVDLLREREALPVN----VG 148 Query: 70 LVT---RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 + R + ++ + R ++ +G V + +G + I+ +A+ + S G+ + Sbjct: 149 DRSYSFARTIGSGRLLTWHDIARRPLVRKGDLVEVSAVEGQLLITMQAMAMENGSQGETV 208 Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149 V+N + + +VVD V+V Sbjct: 209 TVRNPVSRRDFAATVVDENRVQV 231 >gi|223040989|ref|ZP_03611249.1| putative flagella basal body P-ring formation protein FlgA [Campylobacter rectus RM3267] gi|222877745|gb|EEF12866.1| putative flagella basal body P-ring formation protein FlgA [Campylobacter rectus RM3267] Length = 273 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 2/119 (1%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + + ++L + V + + L ++ + V+ L Sbjct: 156 ATRPLATRQMLGVGDFVKDWVELGEFSPDMMSEAPNAR-LAAKQNIKSGEVLRLRQFTSL 214 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +I +G +V +L+ G ++I AL + ++GD I VKN D + S +V V + Sbjct: 215 PLIKKGERVGAVLSDGALSIIVEVTALENGNLGDTIKVKNND-KKVFSAQIVSKKQVMI 272 >gi|154249530|ref|YP_001410355.1| flagellar basal body P-ring biosynthesis protein-like protein [Fervidobacterium nodosum Rt17-B1] gi|154153466|gb|ABS60698.1| Flagellar basal body P-ring biosynthesis protein-like protein [Fervidobacterium nodosum Rt17-B1] Length = 319 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 2/126 (1%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 I V I E++ + ++ ++ ++ V + +V +I Sbjct: 193 IRKIAVSKRRIEKEEIIGLNDVEFVEYNIYSLNKMPVFEEDLPV--MADKVFQKGEIIDG 250 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + +I +G V+ I G + +ST AL + ++G VI+VKN++ GV++ G++ + Sbjct: 251 KYISDVPLIVKGQVVKAISIVGGVMVSTLVQALENGNVGKVISVKNLENGVIIKGTIQED 310 Query: 145 GTVRVV 150 GT+ V+ Sbjct: 311 GTIIVL 316 >gi|121613741|ref|YP_001000458.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. jejuni 81-176] gi|167005399|ref|ZP_02271157.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. jejuni 81-176] gi|87249319|gb|EAQ72279.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 220 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV LV + + + Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|283957249|ref|ZP_06374710.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 1336] gi|283791261|gb|EFC30069.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 1336] Length = 220 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV LV + + + Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|57237614|ref|YP_178862.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni RM1221] gi|86150237|ref|ZP_01068464.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152102|ref|ZP_01070314.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153344|ref|ZP_01071548.1| flagella basal body P-ring formation protein FlgA [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597594|ref|ZP_01100828.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|148926937|ref|ZP_01810614.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205356737|ref|ZP_03223497.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562397|ref|YP_002344176.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124292|ref|YP_004066296.1| flagellar basal body P-ring biosynthesis protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166418|gb|AAW35197.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni RM1221] gi|85839353|gb|EAQ56615.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840887|gb|EAQ58137.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85843070|gb|EAQ60281.1| flagella basal body P-ring formation protein FlgA [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190186|gb|EAQ94161.1| flagellar basal-body P-ring formation protein FlgA, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360103|emb|CAL34897.1| putative flagellar protein FlgA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845021|gb|EDK22118.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205345376|gb|EDZ32019.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284926015|gb|ADC28367.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. jejuni IA3902] gi|315018014|gb|ADT66107.1| flagellar basal body P-ring biosynthesis protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058223|gb|ADT72552.1| Flagellar basal-body P-ring formation protein flgA [Campylobacter jejuni subsp. jejuni S3] gi|315928304|gb|EFV07620.1| flagella basal body P-ring formation protein FlgA [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929194|gb|EFV08416.1| flagella basal body P-ring formation protein FlgA [Campylobacter jejuni subsp. jejuni 305] Length = 220 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV LV + + + Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|224437628|ref|ZP_03658581.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter cinaedi CCUG 18818] Length = 319 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 3/130 (2%) Query: 23 SVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + V I + E L+ ++E + + + SI+++ + + Sbjct: 191 EIQARLRVAKSTQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQM 249 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 I L ++ +G V + Q ++I T +A + ++I +N D+G ++ Sbjct: 250 PITKDKLKPRILVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIR 309 Query: 141 VVDTGTVRVV 150 +V ++ Sbjct: 310 IVSENKGEIL 319 >gi|225849136|ref|YP_002729300.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643496|gb|ACN98546.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense Az-Fu1] Length = 167 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 31/58 (53%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 VI + KV I+ G + I G+AL GD I VKNI TG + G VVD TV V Sbjct: 107 VIQKNQKVNILYINGPIKIQLLGVALESGKEGDYIKVKNISTGKEIVGKVVDNQTVLV 164 >gi|313144080|ref|ZP_07806273.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter cinaedi CCUG 18818] gi|313129111|gb|EFR46728.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter cinaedi CCUG 18818] Length = 307 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 49/119 (41%), Gaps = 1/119 (0%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + I + E L+ ++E + + + SI+++ + + I L Sbjct: 190 TQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQMPITKDKLKPRI 248 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 ++ +G V + Q ++I T +A + ++I +N D+G ++ +V ++ Sbjct: 249 LVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIRIVSENKGEIL 307 >gi|118474723|ref|YP_892063.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter fetus subsp. fetus 82-40] gi|118413949|gb|ABK82369.1| flagella basal body P-ring formation protein FlgA, putative [Campylobacter fetus subsp. fetus 82-40] Length = 258 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 1/123 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + +V I+ +LN S ++ V+ + L+TR + ++ Sbjct: 136 NVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKILTNRQ 195 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 I +G + +L G + I AL D ++GD+I V+N + + +V+ Sbjct: 196 FKTLSDIKKGDLINAVLKDGALNIEVLVTALEDGNVGDIIQVRN-ENNQVFKANVISKNR 254 Query: 147 VRV 149 V + Sbjct: 255 VLI 257 >gi|46203670|ref|ZP_00209070.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Magnetospirillum magnetotacticum MS-1] Length = 99 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 35/74 (47%) Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 L V+ + P +++RG V I+ +++S GIA + +G ++V N + Sbjct: 10 LSAGSVLRSGDVAPPDLVARGESVNIVFETPGVSLSMRGIANENGRLGASVSVTNSASKK 69 Query: 136 MVSGSVVDTGTVRV 149 ++ VV G V V Sbjct: 70 VLQAVVVGPGRVSV 83 >gi|325111112|ref|YP_004272180.1| flagella basal body P-ring formation protein FlgA [Planctomyces brasiliensis DSM 5305] gi|324971380|gb|ADY62158.1| flagella basal body P-ring formation protein FlgA [Planctomyces brasiliensis DSM 5305] Length = 447 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 51/125 (40%), Gaps = 3/125 (2%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + + G+V+ L+ ++ + ++V+G T R + D + S Sbjct: 209 RVLALKRALPRGKVIRADDLQWVEAEQT---AGLFLDPQEVIGTETIRSVRADQPLQQSD 265 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + + ++ R V + G++++ +L +AS+G + + +D ++ V Sbjct: 266 VRQLPLVRRNEIVSVSANIGSISVRRYCRSLGEASLGQFVTLVPVDGKDKITARVTGLRE 325 Query: 147 VRVVV 151 V++ Sbjct: 326 AEVLI 330 >gi|109948204|ref|YP_665432.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter acinonychis str. Sheeba] gi|109715425|emb|CAK00433.1| putative flagella basal body P-ring formation protein FlgA [Helicobacter acinonychis str. Sheeba] Length = 218 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + K+ ++ + S D V + + Sbjct: 87 PVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKV--SAKVFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 D ++ ++ + + + +G ++I + AL + S+ +I KN+++ + Sbjct: 145 AADTLLNTDKTQDLIIVRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESNKI 204 Query: 137 VSGSVVDTGTVRVV 150 + V+ + V+++ Sbjct: 205 LKAKVLSSSKVQIL 218 >gi|15612435|ref|NP_224088.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori J99] gi|4155997|gb|AAD06959.1| putative [Helicobacter pylori J99] Length = 218 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 4/134 (2%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + K+ +V + D V + + Sbjct: 87 PVRYSVIGSMQAFKSASTIKKDENITANNTKKERVLFGALSNPLLEGAIDKV--SAKHFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 PD ++ ++ + + + +G ++I + AL + ++ +I KN+++ + Sbjct: 145 PPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKI 204 Query: 137 VSGSVVDTGTVRVV 150 + V+ + +++ Sbjct: 205 LKAKVLSSSKAQIL 218 >gi|144227|gb|AAA23036.1| basal body ring component protein (pot.); putative [Caulobacter vibrioides] Length = 267 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Query: 22 ASVIGHAVVP-SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 A V+P + ++AGE++ L +++ + + V+GL +R L Sbjct: 122 APRANVEVLPYARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAKRPLREGA 179 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 + + + VI G + I G +++S G A++ A+ GDV AV+N + ++ Sbjct: 180 PVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQ 237 >gi|16126304|ref|NP_420868.1| distal basal-body ring component protein FlaD [Caulobacter crescentus CB15] gi|221235081|ref|YP_002517517.1| flagella basal body P ring formation protein FlgA [Caulobacter crescentus NA1000] gi|13637765|sp|P12634|FLAD_CAUCR RecName: Full=Distal basal body ring component protein; Flags: Precursor gi|13423544|gb|AAK24036.1| distal basal-body ring component protein FlaD [Caulobacter crescentus CB15] gi|220964253|gb|ACL95609.1| flagella basal body P ring formation protein flgA [Caulobacter crescentus NA1000] Length = 267 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + ++AGE++ L +++ + + V+GL +R L + + + Sbjct: 133 ARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAKRPLREGAPVGMKDVAAAQ 190 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 VI G + I G +++S G A++ A+ GDV AV+N + ++ Sbjct: 191 VIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQ 237 >gi|83646787|ref|YP_435222.1| flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] gi|83634830|gb|ABC30797.1| Flagellar basal body P-ring biosynthesis protein [Hahella chejuensis KCTC 2396] Length = 328 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S +G PS G ++ LK + + G S +++ G R + I Sbjct: 201 SAMGEVWTPSTDAEKGTAVDVHPLKREFIDVA-AAGIEPASRREIEGKEFSRRVESGQPI 259 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 VL I G V + + G + + + A+ DA IGD I +K++ +G + G V+ Sbjct: 260 TKDVLRAIPEIKNGDIVFVEVRVGTVFLRSRAEAMHDAYIGDRIKLKSVSSGETMLGVVL 319 Query: 143 DTGTV 147 G V Sbjct: 320 SAGRV 324 >gi|208435345|ref|YP_002267011.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27] gi|208433274|gb|ACI28145.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27] Length = 218 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 13/116 (11%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ ++ + D V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERIPFGTLSNPLLEGAIDKV--SAKHFIPPNTLLSTDKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|298735553|ref|YP_003728074.1| flagella basal body P-ring formation protein FlgA [Helicobacter pylori B8] gi|298354738|emb|CBI65610.1| flagella basal body P-ring formation protein FlgA [Helicobacter pylori B8] Length = 218 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 49/116 (42%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + K+ +V + D V + + PD ++ ++ Sbjct: 105 IKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKNFIPPDTLLSADKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + V+++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 218 >gi|207091891|ref|ZP_03239678.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori HPKX_438_AG0C1] Length = 218 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 55/134 (41%), Gaps = 4/134 (2%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + ++ ++ + D V + + Sbjct: 87 PVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKNFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++ + Sbjct: 145 PPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKI 204 Query: 137 VSGSVVDTGTVRVV 150 + V+ + +++ Sbjct: 205 LKAKVLSSSKAQIL 218 >gi|153952192|ref|YP_001398303.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter jejuni subsp. doylei 269.97] gi|152939638|gb|ABS44379.1| putative flagellar basal-body P-ring formation protein FlgA [Campylobacter jejuni subsp. doylei 269.97] Length = 220 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N + DV L+ + + + Sbjct: 93 FIQANLEVLKSKRAIRRGDKLGAFDYKSILIDFDKVPLNALT-LDDVDNLIAKSNINKNA 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + IL++ N+ + +AL A++G+ I KN + G ++ G Sbjct: 152 ILRANMFKTTALIRRNDPIIGILSEANVDVLIELVALQSANMGERIHAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 VV Sbjct: 211 VVGKNR 216 >gi|217031821|ref|ZP_03437324.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128] gi|216946473|gb|EEC25075.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128] Length = 206 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 49/116 (42%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + K+ +V + D V + + PD ++ ++ Sbjct: 93 IKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKNFIPPDTLLSADKTQALIIVR 150 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + V+++ Sbjct: 151 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 206 >gi|237755438|ref|ZP_04584063.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium yellowstonense SS-5] gi|237692402|gb|EEP61385.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium yellowstonense SS-5] Length = 170 Score = 68.0 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 31/61 (50%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 Y I + KV I+ N+ I G+AL + GD I VKNI TG + G V+ TV + Sbjct: 107 YKIVKNQKVGIVYLNKNIKIQMLGVALENGKEGDYIKVKNISTGKELVGKVISNDTVLIE 166 Query: 151 V 151 Sbjct: 167 A 167 >gi|317010149|gb|ADU80729.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori India7] Length = 218 Score = 68.0 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 57/147 (38%), Gaps = 4/147 (2%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R +L + S+ S+ V I E + + ++ +V + Sbjct: 76 LRLENEPNLRLPVRYSVIGSMQAFKSV--STIKKDENITANNTQKERVLFGALSNPLLEG 133 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 D V + + P+ ++ ++ + + + +G ++I + AL + + Sbjct: 134 AIDRV--SAKHFIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGAFN 191 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +I KN+++ ++ V+ + +++ Sbjct: 192 QIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|317182682|dbj|BAJ60466.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori F57] Length = 218 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + K+ +V + + +G V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTKKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|332674247|gb|AEE71064.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori 83] Length = 218 Score = 67.6 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + +G V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|317179654|dbj|BAJ57442.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori F30] Length = 218 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + +G V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAIGKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|313672413|ref|YP_004050524.1| flagella basal body p-ring formation protein flga [Calditerrivibrio nitroreducens DSM 19672] gi|312939169|gb|ADR18361.1| flagella basal body P-ring formation protein FlgA [Calditerrivibrio nitroreducens DSM 19672] Length = 281 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 56/121 (46%), Gaps = 4/121 (3%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + + I GE + ++KE+QV +N++ + + D + + + + Sbjct: 156 AYIKAFSRGYISDSKIEKGESV-LGKIKEVQVEVTNLKDDLFLNNFDAI---AIQPIPKN 211 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 VI L ++ + +G KV++I G + + + + DA G ++VKN+ + +++G Sbjct: 212 RVITLKMVRQMPEKMKGEKVKVIYNNGTIVLEFEAVLMDDAYKGGRVSVKNLSSDKVLTG 271 Query: 140 S 140 Sbjct: 272 I 272 >gi|217033891|ref|ZP_03439315.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10] gi|216943654|gb|EEC23099.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10] Length = 211 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 49/116 (42%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ +V + D V + + P+ ++ ++ Sbjct: 98 IKKDENITANNTQKERVLFGVLSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 155 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + V+++ Sbjct: 156 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKVQIL 211 >gi|57167765|ref|ZP_00366905.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228] gi|57020887|gb|EAL57551.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228] Length = 220 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 F + I G+ L K + + + N +++D L+ + + + Sbjct: 93 FMQASLEVLKSERSIQRGDKLGAFDYKSVLMDFDKVPSNAL-ALEDTHNLIAKSNISKNT 151 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140 ++ ++ +I R + +L+ GN+ + AL A +G+ I KN + G ++ G Sbjct: 152 ILKENMFKTMALIRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGI 210 Query: 141 VVDTGT 146 V Sbjct: 211 VTGKNR 216 >gi|317011612|gb|ADU85359.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori SouthAfrica7] Length = 218 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 4/147 (2%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R +L + S+ AS+ + + I E + K+ ++ + Sbjct: 76 LRLENEPNLRLPVRYSVIASMQAFKSISA--IKKDENITAHNTKKERIAFGALSNPLLEG 133 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 D V + + PD ++ ++ + + + +G ++I + AL + S+ Sbjct: 134 AIDKV--SAKNFIPPDTLLNADKTQDLIIVRKNDIITGVYEEGQISIEISLKALENGSLN 191 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150 +I KN ++ ++ V+ + V+++ Sbjct: 192 QIIQAKNAESNKILKAKVLSSSKVQIL 218 >gi|261840153|gb|ACX99918.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori 52] Length = 218 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + K+ ++ + + +G V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTKKERILFGVLSNPLL---EGAIGKVSAKNFIPPNTLLSTDKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|317014892|gb|ADU82328.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Gambia94/24] Length = 218 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + K+ +V + D V + + Sbjct: 87 PVRYSVIGSMQAFKSASAIKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKHFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 PD ++ + ++ + + + +G ++I + AL + ++ +I KN+++ + Sbjct: 145 PPDTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKI 204 Query: 137 VSGSVVDTGTVRVV 150 + V+ + +++ Sbjct: 205 LKAKVLSSSKAQIL 218 >gi|254779987|ref|YP_003058094.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori B38] gi|254001900|emb|CAX30153.1| Putative flagellar protein FlgA; putative signal peptide [Helicobacter pylori B38] Length = 218 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ +V + D V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDRV--SAKHFIPPNTLLSADKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|150020565|ref|YP_001305919.1| flagellar basal body P-ring biosynthesis protein-like protein [Thermosipho melanesiensis BI429] gi|149793086|gb|ABR30534.1| Flagellar basal body P-ring biosynthesis protein-like protein [Thermosipho melanesiensis BI429] Length = 310 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 +L A I V + IN GE + + V ++ G + + +V ++ Sbjct: 176 VNLIAEYIRKIPVAARNINYGEQIKRDDVVFSDVNVLSLHGTPVDVSR--LPMVAKKYFK 233 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 I L + + G + + + + A+ ++GDVI +N+D+G +V Sbjct: 234 VGEPIFEEFLEKVPDVVVGQLIFGYVELPGVKVHALLRAMESGNVGDVIKARNVDSGKIV 293 Query: 138 SGSVVDTGTVRVV 150 G +V+ ++VV Sbjct: 294 YGVIVEGPMLKVV 306 >gi|308185247|ref|YP_003929380.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori SJM180] gi|308061167|gb|ADO03063.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori SJM180] Length = 218 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + K+ +V + D V + + PD ++ ++ Sbjct: 105 IKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKHFIPPDTLLSTDKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|108563861|ref|YP_628177.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori HPAG1] gi|107837634|gb|ABF85503.1| hypothetical protein HPAG1_1436 [Helicobacter pylori HPAG1] Length = 218 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ ++ + S D V + + PD ++ + ++ Sbjct: 105 IKKDENITANNTQKERIPFGVLSNPLLESAIDKV--SAKNFIPPDTLLSMDKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|210135644|ref|YP_002302083.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori P12] gi|210133612|gb|ACJ08603.1| flagella basal body P-ring formation protein FlgA [Helicobacter pylori P12] Length = 218 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ +V + D V + + PD ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKHFIPPDTLLSADKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|307638132|gb|ADN80582.1| Flagellar basal-body P ring formation protein [Helicobacter pylori 908] gi|325996732|gb|ADZ52137.1| Flagellar basal-body P-ring formation protein [Helicobacter pylori 2018] gi|325998326|gb|ADZ50534.1| putative P-ring biosynthesis protein [Helicobacter pylori 2017] Length = 218 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + K+ +V+ + D V + + Sbjct: 87 PVRYSVIGSMQAFKSASAIKKDENITANNTKKERVSFGALSNPLLEGAIDKV--SAKNFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136 PD ++ ++ + + + +G ++I + AL + ++ +I KN+++ + Sbjct: 145 PPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKI 204 Query: 137 VSGSVVDTGTVRVV 150 + V+ + +++ Sbjct: 205 LKAKVLSSSKAQIL 218 >gi|254499119|ref|ZP_05111809.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12] gi|254351658|gb|EET10503.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12] Length = 288 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 2/127 (1%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V I +L+ + + + ++ V L R + + ++ Sbjct: 163 AYQAVFVAQHKIKQHTLLHSEDIALQRRNIAGLKNPPLTQFPQRVWL--TRSINKNQILT 220 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + + +G KV + + Q ++I +A SDA +G + ++N T +V Sbjct: 221 HDDVRTTPEVMQGHKVNVNVRQHGISIMMEALAQSDAYLGQAVRMQNPQTNKYFVATVTG 280 Query: 144 TGTVRVV 150 +V Sbjct: 281 KNQAEIV 287 >gi|308062741|gb|ADO04629.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Cuz20] Length = 218 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + + V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGTLSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|15646086|ref|NP_208268.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori 26695] gi|2314666|gb|AAD08529.1| predicted coding region HP1477 [Helicobacter pylori 26695] Length = 218 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 56/139 (40%), Gaps = 4/139 (2%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 L + S+ S+ V + I E + + ++ ++ + D V Sbjct: 84 LRLPVRYSVIGSMQAFKSVSA--IKKDENITANNTQKERILFGALSNPLLEGAIDKV--S 139 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 + + P+ ++ ++ + + + +G ++I + AL + ++ +I KN+ Sbjct: 140 AKNFIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNL 199 Query: 132 DTGVMVSGSVVDTGTVRVV 150 ++ ++ V+ + +++ Sbjct: 200 ESNKILKAKVLSSSKAQIL 218 >gi|329901226|ref|ZP_08272751.1| Flagellar basal-body P-ring formation protein flgA [Oxalobacteraceae bacterium IMCC9480] gi|327549158|gb|EGF33750.1| Flagellar basal-body P-ring formation protein flgA [Oxalobacteraceae bacterium IMCC9480] Length = 245 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 5/142 (3%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + VI V + + G+++ + + M+ + + +G Sbjct: 109 WTVYVTAQV----KVIAEYVASAAPLAQGQLVGPNDVIRMRGDLTVLPAGILTDPAQAIG 164 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L + L V+ +G VR++ + +++T G AL++A+ G + + Sbjct: 165 RTMAMSLGMGSPLRTDALRIQQVVQQGQAVRLVSSGPGFSVATEGRALNNAAEGQIAQAR 224 Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151 G +VSG G V V Sbjct: 225 -TAAGQVVSGVARAGGYVDVTY 245 >gi|303248238|ref|ZP_07334501.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio fructosovorans JJ] gi|302490376|gb|EFL50287.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio fructosovorans JJ] Length = 324 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 RR + +I + +I RG +VR++ + ++ A++D + G I VKN Sbjct: 245 RARRGVGTGQIIMADDMEPMPLILRGEQVRVVYQGRGVRLTLLAEAMTDGAPGGKITVKN 304 Query: 131 IDTGVMVSGSVVDTGTVRV 149 + G V D TV V Sbjct: 305 PKGNKEIMGVVRDRSTVVV 323 >gi|317181160|dbj|BAJ58946.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori F32] Length = 218 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + K+ +V + + + V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTKKERVLFGTLSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|261838751|gb|ACX98517.1| hypothetical protein KHP_1328 [Helicobacter pylori 51] Length = 218 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ +V + D V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|289807482|ref|ZP_06538111.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 84 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 V+ R L P + L+++ + + + G +V++I +++ G A+++A++ V+ Sbjct: 5 VSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR- 63 Query: 131 IDTGVMVSGSVVDTGTVRV 149 + +G +VSG+V G + + Sbjct: 64 MTSGQIVSGTVDSDGNILI 82 >gi|317178182|dbj|BAJ55971.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori F16] Length = 218 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + + V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|56551515|ref|YP_162354.1| hypothetical protein ZMO0619 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761159|ref|ZP_04759248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|4378864|gb|AAD19732.1| flagellar protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543089|gb|AAV89243.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374778|gb|EER64239.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 188 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG V ++ + T+S GIA D ++GD I VK+ + V VV++G VR+ Sbjct: 127 LVKRGDPVELVAGNNSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184 >gi|188528248|ref|YP_001910935.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Shi470] gi|188144488|gb|ACD48905.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Shi470] gi|308064237|gb|ADO06124.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Sat464] Length = 218 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + + V + + P+ ++ ++ Sbjct: 105 IKKDENITATNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSADKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|317013247|gb|ADU83855.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori Lithuania75] Length = 218 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 57/139 (41%), Gaps = 4/139 (2%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 L + S+ S+ V + I E + + K+ +V + D V Sbjct: 84 LRLPVRYSVIGSMQAFKSVSA--IKKDENITANNTKKERVLFGVLSNPLLEGAIDKV--S 139 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 + + P+ ++ + ++ + + + +G ++I + AL + ++ +I KN+ Sbjct: 140 AKNFIPPNTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNL 199 Query: 132 DTGVMVSGSVVDTGTVRVV 150 ++ ++ V+ + +++ Sbjct: 200 ESNKILKAKVLSSSKAQIL 218 >gi|309388847|gb|ADO76727.1| flagella basal body P-ring formation protein FlgA [Halanaerobium praevalens DSM 2228] Length = 323 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 2/127 (1%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV--GLVTRRVLLPDHVIPL 84 + + + L +S + + S ++ + R L V+ Sbjct: 196 KVLTANKKLARNSKLKKSDFEREEKIVSGNLEKIVRDYAEIDFNKVQLTRDLNQGEVLNK 255 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 S L PYV+ G K+ + + N+ IST A IGD+I V+N+ TG V+ Sbjct: 256 SYLKIPYVVKWGQKLNLRVKVNNIKISTLVKAKERGKIGDIIKVENLRTGYDFQVLVISP 315 Query: 145 GTVRVVV 151 V+++ Sbjct: 316 TEVKLIS 322 >gi|260752880|ref|YP_003225773.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552243|gb|ACV75189.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 188 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 ++ RG V ++ + T+S GIA D ++GD I VK+ + V VV++G VR+ Sbjct: 127 LVKRGDPVELVAGNSSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184 >gi|330809231|ref|YP_004353693.1| flagella basal body P-ring formation protein flgA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377339|gb|AEA68689.1| putative flagella basal body P-ring formation protein flgA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 232 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 43/114 (37%) Query: 36 NAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISR 95 A + L +++ + +V + + + D+ G + + + L ++ R Sbjct: 117 RADQALADAQPRLERVDLAAAQLSPGDLPNDLAGQWLTQSVNAGMPVLKRHLKAEPLVYR 176 Query: 96 GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 A V +++ + + T G AL +G+ + V + V G V V Sbjct: 177 DAPVTVVVYGPGLMLRTEGKALRPGVLGERVPVMLDGAESSLLAVVAGKGEVHV 230 >gi|308183580|ref|YP_003927707.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori PeCan4] gi|308065765|gb|ADO07657.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori PeCan4] Length = 218 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I E + + ++ +V + D V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKNFIPPNTLLSADKTQALIIVR 162 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 163 KNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|157165005|ref|YP_001466855.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter concisus 13826] gi|112801327|gb|EAT98671.1| putative flagella basal body P-ring formation protein FlgA [Campylobacter concisus 13826] Length = 268 Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 LVT+ + ++ + ++ +G + +L++G + I AL D ++GD+I ++ Sbjct: 189 LVTKVQIRSGEILTKRQFNAISLVKKGQILNAVLSEGGVKIIAEVKALEDGNLGDMIKIR 248 Query: 130 NIDTGVMVSGSVVDT 144 ++ +V Sbjct: 249 -TRENKILQATVSGK 262 >gi|309788128|ref|ZP_07682734.1| flagella basal body P-ring formation protein flgA [Shigella dysenteriae 1617] gi|308923980|gb|EFP69481.1| flagella basal body P-ring formation protein flgA [Shigella dysenteriae 1617] Length = 122 Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 43/101 (42%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V ++ I G L +K + + I +V V+ R PD I L+ Sbjct: 1 MVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPSPDQSIQLTQFR 60 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 + + + G +V +I + + + G AL++A++ V+ Sbjct: 61 QAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 101 >gi|297380668|gb|ADI35555.1| flagella basal body P-ring formation protein FlgA [Helicobacter pylori v225d] Length = 218 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + ++ +V + + + V + + P+ ++ ++ Sbjct: 105 IKKDENITANNTQKERVLFGALSNPLL---EGAINKVSAKNFIPPNTLLSTDKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|213023590|ref|ZP_03338037.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 133 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 45/105 (42%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + + G L + + + + I+ + V+ R L P Sbjct: 28 VNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 87 Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124 + L+++ + + + G +V++I +++ G A+++A++ Sbjct: 88 QPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQ 132 >gi|224418872|ref|ZP_03656878.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter canadensis MIT 98-5491] gi|253827826|ref|ZP_04870711.1| flagellar basal body P-ring biosynthesis protein [Helicobacter canadensis MIT 98-5491] gi|313142389|ref|ZP_07804582.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter canadensis MIT 98-5491] gi|253511232|gb|EES89891.1| flagellar basal body P-ring biosynthesis protein [Helicobacter canadensis MIT 98-5491] gi|313131420|gb|EFR49037.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter canadensis MIT 98-5491] Length = 298 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV- 81 +V I+ G+ + ++ +++ I S + +G V R P V Sbjct: 172 DATLEGMVTIDEISGGQTITYQNIRVVEIPFDKIGSELMRSDE--IGKVAVRSYTPKEVL 229 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + L V+ +G K+ + + + + + AL + +IGDVI K ++ V Sbjct: 230 VTHDRLVAKRVVKKGDKIVVSVQEEGVVLEFVLEALKNGAIGDVIRAKALEGKKTYQVKV 289 Query: 142 VDTGT 146 +D G Sbjct: 290 IDEGR 294 >gi|78777321|ref|YP_393636.1| flagellar basal body P-ring biosynthesis protein FlgA [Sulfurimonas denitrificans DSM 1251] gi|78497861|gb|ABB44401.1| Flageller protein FlgA [Sulfurimonas denitrificans DSM 1251] Length = 289 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 2/118 (1%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + L+ S + V R +I L +R + D ++ + + Sbjct: 173 KDSLKKDTNLSPSNTFKKSVRLDRFRDKPLQNIYKT-SLQVKRHIQKDAILTIRDVEIAD 231 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ R + + + + + M I+ + A DA + D+I V+N +G ++ V + + + Sbjct: 232 VVKRDSNINVTMHRDGMDITFSAKAQKDAKVNDIINVQN-SSGKILKVKVTGSNSAEI 288 >gi|315585864|gb|ADU40245.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori 35A] Length = 218 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHVIPLSVLHRPYVI 93 I E + + K+ ++ + + + V + + P+ ++ + ++ Sbjct: 105 IKKDENITANNTKKERILFGALSNPLL---EGAINKVSAKNFIPPNTLLSVDKTQALIIV 161 Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 + + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++ Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESNKILKAKVLSSSKAQIL 218 >gi|268317782|ref|YP_003291501.1| flagella basal body P-ring formation protein FlgA [Rhodothermus marinus DSM 4252] gi|262335316|gb|ACY49113.1| flagella basal body P-ring formation protein FlgA [Rhodothermus marinus DSM 4252] Length = 237 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 5/133 (3%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN--YAHSIKDVV---GLVTRRV 75 + + +V + E ++ S L+ + + +R ++ + L+ R Sbjct: 98 YVARYDSVIVARQALRRDEPVDPSALEVVWQETTRLRTPPLTPTRLRQLQRQGPLLAVRS 157 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + V+ L PY + G V + +G + + A + +GD I + T Sbjct: 158 VTAGQVLRADDLRPPYAVQTGETVWMRYRRGGILLRLRCQARAAGFVGDEIELYAPQTRA 217 Query: 136 MVSGSVVDTGTVR 148 G +V G V Sbjct: 218 TYRGRIVAPGLVE 230 >gi|217076994|ref|YP_002334710.1| flagella basal body P-ring formation protein FlgA [Thermosipho africanus TCF52B] gi|217036847|gb|ACJ75369.1| flagella basal body P-ring formation protein FlgA [Thermosipho africanus TCF52B] Length = 310 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + IN GE +N + V ++RG K + +++R+ + R Sbjct: 188 VAARNINYGEQVNMDDVAFADVNIFSLRGTPLDVSK--LPMISRKYFKVGEPLFEEYFER 245 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G + + + + T AL ++GDVI +NI++G +V G +V+ ++V Sbjct: 246 VPDVVVGQVIVGYVELPGVIVKTMLRALESGNVGDVIKARNIESGKIVYGLIVEGPMLKV 305 Query: 150 V 150 V Sbjct: 306 V 306 >gi|261886408|ref|ZP_06010447.1| flagellar basal body P-ring biosynthesis protein FlgA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 235 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + +V I+ +LN S ++ V+ + L+TR + ++ Sbjct: 132 NVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKILTNRQ 191 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 I +G + +L G + I L D ++GD+I V+N Sbjct: 192 FKTLSDIKKGDLINAVLKDGALNIEVLVTELEDGNVGDIIQVRN 235 >gi|305432211|ref|ZP_07401375.1| flagella basal body P-ring formation protein FlgA [Campylobacter coli JV20] gi|304444754|gb|EFM37403.1| flagella basal body P-ring formation protein FlgA [Campylobacter coli JV20] Length = 127 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 2/114 (1%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 I G+ L K + + + N +++D L+ + + + ++ ++ + Sbjct: 12 RSIQRGDKLGAFDYKSVLMDFDKVPSNAL-ALEDTHNLIAKSNISKNTILKENMFKTMAL 70 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 I R + +L+ GN+ + AL A +G+ I KN + G ++ G V Sbjct: 71 IRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGIVTGKNR 123 >gi|24215366|ref|NP_712847.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira interrogans serovar Lai str. 56601] gi|45657205|ref|YP_001291.1| flagella basal body P-ring formation protein precursor [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196477|gb|AAN49865.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira interrogans serovar Lai str. 56601] gi|45600443|gb|AAS69928.1| flagella basal body P-ring formation protein precursor [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 296 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 4/124 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIP 83 + + +N G + +E ++ S S +++G + + + Sbjct: 173 MVTVLKAKRSLNQGIKITNEDFQEEEIFTSE---EILDSPGNELLGSTLLKNMNEGEIFR 229 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143 + + + RG ++ +I +G++ + T ALS +IG+ + V + VVD Sbjct: 230 KKHVRKIQDVQRGGEILMIYHKGSLVLKTKVKALSSGNIGEEVQVTTHSRENQMKAKVVD 289 Query: 144 TGTV 147 TV Sbjct: 290 KNTV 293 >gi|149193821|ref|ZP_01870919.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter mediatlanticus TB-2] gi|149135774|gb|EDM24252.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter mediatlanticus TB-2] Length = 157 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 L+ +++ + +I + ++ RG V + + N+TI+T AL D +IGD+I ++ Sbjct: 79 LIASKIISKNSIITTLNTKKAPLVLRGENVNVTIKSKNITITTTAKALKDGNIGDIINIE 138 Query: 130 NIDTGVMVSGSVVDTGTVR 148 + VV+ V Sbjct: 139 --MNKRIYKAIVVNKNQVE 155 >gi|331005469|ref|ZP_08328848.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989] gi|330420745|gb|EGG95032.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989] Length = 317 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 48/121 (39%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V I LN + + GN K + +V+ + ++L Sbjct: 196 LVAKNRIETKTPLNIDLFTIDYIDVTTFSGNPVTEYKKLDSRRAVKVIEKGTALTYNMLE 255 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 + +++G + + + Q N+ IST IAL +I + I + N T G++V V Sbjct: 256 KIPFVTKGQLINVYVRQHNVGISTKAIALKSGNINEKIPMLNPATKGKYMGTIVGEKQVV 315 Query: 149 V 149 V Sbjct: 316 V 316 >gi|239815250|ref|YP_002944160.1| flagella basal body P-ring formation protein FlgA [Variovorax paradoxus S110] gi|239801827|gb|ACS18894.1| flagella basal body P-ring formation protein FlgA [Variovorax paradoxus S110] Length = 351 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 7/127 (5%) Query: 30 VPSVVINAGEVLNESRLK----EMQVTNSNIRGNYAHSIK---DVVGLVTRRVLLPDHVI 82 V + + +G ++ L+ +V +NI S D RR L V+ Sbjct: 223 VATQSMRSGSQVDAVLLRGATESREVDLTNISHGTPVSSSAELDAGRQRLRRPLKSGEVL 282 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + L + RG + G +++ + L D G ++ VK V V Sbjct: 283 THAHLEPVPAVVRGNWAHLQARSGAVSVESRVEVLQDGRTGQLVRVKVPGASGEVLARVT 342 Query: 143 DTGTVRV 149 G V V Sbjct: 343 GPGQVEV 349 >gi|254457883|ref|ZP_05071310.1| flageller protein FlgA [Campylobacterales bacterium GD 1] gi|207085276|gb|EDZ62561.1| flageller protein FlgA [Campylobacterales bacterium GD 1] Length = 289 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 2/115 (1%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 IN L+ + + N +I L + + D VI + V+ Sbjct: 176 INRDTELSPLNTVKKSILLDNFMAKPIQNIDSNA-LQGKHNIKKDEVITTRDVEILSVVK 234 Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 R + + + L NM+IS + AL D +GD I V+ +G + V + Sbjct: 235 RDSFIDVSLNSKNMSISFSAKALQDGKLGDTITVQ-KSSGKRLKVRVTGKNRAEM 288 >gi|239817169|ref|YP_002946079.1| flagella basal body P-ring formation protein FlgA [Variovorax paradoxus S110] gi|239803746|gb|ACS20813.1| flagella basal body P-ring formation protein FlgA [Variovorax paradoxus S110] Length = 237 Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 5/148 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C ++ YVL+ +V G +V + I+ G+ L + + + Sbjct: 92 LRCHSEQKPWTRYVLA----HVAVEGRYLVAARNIDTGQALGAGDFIARNGDLTALPRSV 147 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 + ++ G+V + + ++ VI +G ++++ +ST A+S A Sbjct: 148 VTDLAELQGVVAANRIASGAPLRRELMRGVAVIQQGQTIKVVAEGPGYVVSTEARAMSSA 207 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 S G + + +D G MVSG + G VR Sbjct: 208 SAGAAVRARTVD-GRMVSGVADEEGQVR 234 >gi|206603524|gb|EDZ40004.1| Hypothetical protein CGL2_11111025 [Leptospirillum sp. Group II '5-way CG'] Length = 212 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152 + G VRI IS GIA GD I+V N +G V +V VR+ +K Sbjct: 146 VRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQISVFNPMSGSRVQATVTGPDRVRIRLK 205 >gi|301168506|emb|CBW28096.1| hypothetical protein BMS_3353 [Bacteriovorax marinus SJ] Length = 297 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 58/136 (42%), Gaps = 3/136 (2%) Query: 17 LDSLFASVIGHAVVPSVVINAG-EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + + + A+VP +I + L++ +E +V N + +I + + Sbjct: 164 MLNAKLQIKTRALVPKGIIKIDNQPLSKQMFREEEVYTDN-PSSLFTNINTLNFYKVNKS 222 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135 + D + ++ L ++ G ++IL G +++ + L A G+ + +++ Sbjct: 223 ID-DRAVLINDLVPVSLVKAGIPTKVILDNGIISLKSVATPLRSARFGETVQLRSSKGNK 281 Query: 136 MVSGSVVDTGTVRVVV 151 ++ G V+D V V + Sbjct: 282 IIVGKVIDYNKVSVEL 297 >gi|149173756|ref|ZP_01852385.1| Flageller protein FlgA [Planctomyces maris DSM 8797] gi|148847286|gb|EDL61620.1| Flageller protein FlgA [Planctomyces maris DSM 8797] Length = 383 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 3/121 (2%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 + +N G V+ L M+ + V+G R + HV+ L Sbjct: 218 LAAKYTLNKGTVVRADDLVWMRPEKDQTG---ITDPRLVIGRELTRTVYQSHVMRSQDLI 274 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 +I GA V + +G +++ A +GD I + ++ + +V Sbjct: 275 EVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAE 334 Query: 149 V 149 V Sbjct: 335 V 335 >gi|124516716|gb|EAY58224.1| protein of unknown function [Leptospirillum rubarum] Length = 213 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 27/67 (40%) Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 L + G VRI IS GIA GD IAV N +G V +V Sbjct: 140 SLEEEEGVRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQIAVFNPMSGSRVQATVTGPD 199 Query: 146 TVRVVVK 152 VR+ +K Sbjct: 200 RVRIRLK 206 >gi|291280519|ref|YP_003497354.1| hypothetical protein DEFDS_2151 [Deferribacter desulfuricans SSM1] gi|290755221|dbj|BAI81598.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 286 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 4/135 (2%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 + L + Y + V ++ E+L + ++++ +V + IRG I Sbjct: 144 YFLLSTYYHEYRIYAYIRGYKEVYVTKSRVSKNEMLTD-KVEKKRVEITKIRGFPCEKID 202 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125 +VV ++ + + V+ + + + +G V + N+ I GI +A Sbjct: 203 NVV---AKKTIPKNRVVTNAYVIQKPDAFKGDYVTVFYKGENVFIKAKGILQENAYRNKY 259 Query: 126 IAVKNIDTGVMVSGS 140 + + N + + Sbjct: 260 VKIANPSSKKIFFAK 274 >gi|239907791|ref|YP_002954532.1| putative flagella basal body P-ring formation protein FlgA [Desulfovibrio magneticus RS-1] gi|239797657|dbj|BAH76646.1| putative flagella basal body P-ring formation protein FlgA [Desulfovibrio magneticus RS-1] Length = 350 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 R+ + V+ + +I RG +V++I + ++ A++D + G I VKN Sbjct: 271 RARKGVGTGQVLMADDMEPMPLIVRGDQVKLIYQGRAVRLTMLAEAMTDGAPGGKITVKN 330 Query: 131 IDTGVMVSGSVVDTGTVRV 149 ++G V D TV V Sbjct: 331 SKFAKEITGLVKDKTTVVV 349 >gi|91791416|ref|YP_561067.1| flageller protein FlgA [Shewanella denitrificans OS217] gi|91713418|gb|ABE53344.1| Flageller protein FlgA [Shewanella denitrificans OS217] Length = 285 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 SV + AG L +S+L + N ++ + RR + + I +L + Sbjct: 165 ASVPLKAGSPLYQSQLTQSWEPLVNSVNLVDLTLDFELDWKARRPIRTEQKISRGMLLQA 224 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 + G +V I+L G++TI T G AL +G+ + + V G +V G V++ Sbjct: 225 STVEVGDEVMIVLFNGSLTIDTTGRALERGYLGEQVFILVDGAKAPVKGVIVQKGVVKI 283 >gi|307721023|ref|YP_003892163.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas autotrophica DSM 16294] gi|306979116|gb|ADN09151.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas autotrophica DSM 16294] Length = 291 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 20/148 (13%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 +FF+ +L+ S+ + I L+ ++ + + R Sbjct: 158 KIFFNYQILAAVSV--------LTARNNIKKDSELSSVNTRKNSIILNKFRAM------P 203 Query: 67 VVGL-----VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 + GL + L + +I + Y++ RG+ V + L + I + AL + Sbjct: 204 LQGLHVSRYQAKHNLKANDIITSRDVIGLYLVKRGSNVNVSLQNAGIDIFFSAKALQNGR 263 Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 +GD I+V + + VV V Sbjct: 264 LGDSISVMQKNDKK-LKVVVVGRNKAEV 290 >gi|34557026|ref|NP_906841.1| flagellar basal body P-ring biosynthesis protein FlgA [Wolinella succinogenes DSM 1740] gi|34482741|emb|CAE09741.1| hypothetical protein WS0610 [Wolinella succinogenes] Length = 319 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 51/123 (41%), Gaps = 3/123 (2%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV-TRRVLLPDHV 81 A+ + G+VL+ ++ ++ I + KD VG V + P+ + Sbjct: 193 DATLEAIFTKETLKGGDVLDSGSVEIKRIPFERITSEWMR--KDQVGKVSVKSYTSPETL 250 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + + V+ RG +R+ + +G +++ + A + ++G I V+N + Sbjct: 251 LTQDRIIPKIVVRRGDVIRVRIQEGAVSLEFSATAQQEGAVGSKIRVRNEKNKKSYDVKI 310 Query: 142 VDT 144 +D Sbjct: 311 IDP 313 >gi|226225710|ref|YP_002759816.1| hypothetical protein GAU_0304 [Gemmatimonas aurantiaca T-27] gi|226088901|dbj|BAH37346.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 181 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 2/120 (1%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VGLVTRRVLLPDHVIPLSVLH 88 V + + GE L + + T + G VTRR + V+ + Sbjct: 61 VAARAMVRGETLQAEDITLVDTTIVWRWSSIDPDTTRPSAGWVTRRAIAAGEVLRAPAVM 120 Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 P V++ GA V I G + + AG+A + A++G ++V+ ID + G + TVR Sbjct: 121 APPVVTSGAAVTAIWQDGPLRLVLAGVATNTAAVGAPVSVR-IDRNRRLDGIAIAPNTVR 179 >gi|289549045|ref|YP_003474033.1| flagella basal body P-ring formation protein FlgA [Thermocrinis albus DSM 14484] gi|289182662|gb|ADC89906.1| flagella basal body P-ring formation protein FlgA [Thermocrinis albus DSM 14484] Length = 215 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ I G VL + + ++ + + +T + +I S+ Sbjct: 90 TVLIAKEDIPKGRVLKPDMFYKEERWGRSVPSDLRLEDIHLSQYITSTFIPKGSIIRRSL 149 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV-----KNIDTGVMVSGSV 141 L + G V T GN+ + +L IG + V KN ++ V Sbjct: 150 LKPIPAVEIGQTVEAFYTSGNLELKFHARSLDRGYIGKTVRVLPEGKKNP----ILRAKV 205 Query: 142 VDTGTVRVVV 151 + G V+++ Sbjct: 206 IAPGKVQILY 215 >gi|116327821|ref|YP_797541.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331367|ref|YP_801085.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120565|gb|ABJ78608.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125056|gb|ABJ76327.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 294 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIPLS 85 + S ++N G + + KE +V S S +++G + + + Sbjct: 173 KVLKASRLLNKGVKIVKEDFKEEEVLTSE---EILDSPGNELLGSTLLKDMNEGEIFRKK 229 Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 + + + RG ++ +I +G++ + ALS +IG+ + V + VVD Sbjct: 230 HVRKIQDVQRGGEILMIYHKGSLVLKAKVKALSSGNIGEEVQVTAHSREGQLRAKVVDKN 289 Query: 146 TV 147 TV Sbjct: 290 TV 291 >gi|160901816|ref|YP_001567397.1| flagellar basal body P-ring biosynthesis protein-like protein [Petrotoga mobilis SJ95] gi|160359460|gb|ABX31074.1| Flagellar basal body P-ring biosynthesis protein-like protein [Petrotoga mobilis SJ95] Length = 310 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 19/126 (15%) Query: 25 IGHAVVPSVVINAGEVLNESR----------LKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 +V S + G +LNE + V +R KDV Sbjct: 180 YEEVLVYSKDLTRGTILNEELTEPATKNVLTINNKPVDVELLRSGSYELTKDV------- 232 Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134 ++ + L R + G V +++ + +ST A+++ + GD ++V+N+++G Sbjct: 233 --KKGEIVDSTYLKRIPDVKPGDIVTVLVEFEGIRVSTLARAMTNGNFGDTLSVRNVESG 290 Query: 135 VMVSGS 140 +++G Sbjct: 291 NIITGK 296 >gi|332088756|gb|EGI93868.1| flagella basal body P-ring formation protein flgA [Shigella boydii 5216-82] Length = 90 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%) Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 I +V ++ R L PD I L+ + + + G +V +I + + + G AL++A++ Sbjct: 3 DINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAV 62 Query: 123 GDVIAVK 129 V+ Sbjct: 63 AQNARVR 69 >gi|299066529|emb|CBJ37719.1| putative flagellar protein FlgA precursor [Ralstonia solanacearum CMR15] Length = 356 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 3/138 (2%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS---IKDVVGLV 71 S S V + +G L++ ++ ++ + + + + V L Sbjct: 217 TVPVSFDVSAYERGYVTDLAEASGSPLDQIHMQPKEIDLTALPSKAVLTSLKPEAVANLR 276 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 RR + + L + ++RG + G + + + L D G ++ VK Sbjct: 277 LRRPMAAGEAVTLDSVESRPAVARGDWATLHAVAGAVNLESRVEVLEDGRNGQLVHVKLP 336 Query: 132 DTGVMVSGSVVDTGTVRV 149 + + VV V V Sbjct: 337 NATSPMLARVVGERMVEV 354 >gi|254446190|ref|ZP_05059666.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium DG1235] gi|198260498|gb|EDY84806.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium DG1235] Length = 64 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%) Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 ++ +G V + G + I+ IA D + GD+I ++NID+ S V+ V Sbjct: 2 ERALVRKGDVVEVSAVNGLLAITMRAIARQDGTDGDLILLRNIDSAKEFSARVIGENRVE 61 Query: 149 VV 150 V+ Sbjct: 62 VI 63 >gi|224372860|ref|YP_002607232.1| flagella basal body P-ring formation protein FlgA [Nautilia profundicola AmH] gi|223589880|gb|ACM93616.1| flagella basal body P-ring formation protein FlgA [Nautilia profundicola AmH] Length = 199 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + VI+ E++ + E+ S +++ +++ + VI S Sbjct: 85 ATRVIHLNELVQPNTTSEIIKFRSFYSQPLTVIPNNLI---ASKIISKNAVINRSNTKIR 141 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK-NIDTGVMVSGSVVDTGTV 147 +I +G V +I N+ I + G AL+DA++ + + VK N + +G G V Sbjct: 142 PLILKGDSVSVIFKDKNIEIYSKGTALNDANLNENVKVKINT---KIYNGIANKNGEV 196 >gi|251772411|gb|EES52978.1| protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 217 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 ++ G V + I +GIA SD +GD + V N +GV +SG V V VV+ Sbjct: 153 MVKAGDNVHVTARGDGFLIRFSGIAQSDGGVGDAVPVVNPVSGVSMSGQVTGRDAVMVVL 212 >gi|291457156|ref|ZP_06596546.1| putative flagella basal body P-ring formation protein FlgA [Bifidobacterium breve DSM 20213] gi|291380991|gb|EFE88509.1| putative flagella basal body P-ring formation protein FlgA [Bifidobacterium breve DSM 20213] Length = 188 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 1/98 (1%) Query: 3 CVRFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 C+ + L ++ A V V+ I GE+++ + ++ + S + +YA Sbjct: 8 CIAAFCAGLAVLFGLGTVLAQVQTAPVVIADRPIARGEIISSADIRVELLPVSTVGSSYA 67 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99 ++ GL+ + + + I + + G V Sbjct: 68 TDADEITGLIAQIDIAVNDPISTHMARDAPLPPTGTTV 105 >gi|229818382|ref|ZP_04448663.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM 20098] gi|229784252|gb|EEP20366.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM 20098] Length = 221 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 2/111 (1%) Query: 6 FLLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +F L V + ++ G V + I G + + M V S + G H+ Sbjct: 34 TAMFLCLAVFGVLYSLDAITGTDTIVTAATPIARGTTIRHDDVVMMTVPASPVTGKALHT 93 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 VG + + + + + + I+ G V I ++ G Sbjct: 94 TDKAVGSIAQHPIEAGQPLYAGSVGKAPTITTGDTVLDIAVANSINALIPG 144 >gi|242309211|ref|ZP_04808366.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pullorum MIT 98-5489] gi|239524252|gb|EEQ64118.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pullorum MIT 98-5489] Length = 298 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 52/125 (41%), Gaps = 3/125 (2%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP-DHV 81 ++ + I+ G+ + + +++ + + + +G V R P + + Sbjct: 172 DATLEGIITASEISGGQTITYQNSRIVEIPFDKVGSDLMQQGE--LGKVAVRSYTPENVL 229 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141 + L V+ +G K+ + + + + + AL +A+IGDVI K ++ + Sbjct: 230 VTKDRLIAKRVVKKGDKIIVSVQEEGVILEFILEALKNAAIGDVIKAKALEGKKTYEVKI 289 Query: 142 VDTGT 146 +D G Sbjct: 290 IDEGR 294 >gi|296122948|ref|YP_003630726.1| flagella basal body P-ring formation protein FlgA [Planctomyces limnophilus DSM 3776] gi|296015288|gb|ADG68527.1| flagella basal body P-ring formation protein FlgA [Planctomyces limnophilus DSM 3776] Length = 423 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + GE++ + L + V+G+ RR ++ L L Sbjct: 268 RRAMQKGEIVQQGDLMWK---LDTAQAECCTEPGQVIGMECRRATKAGELVNLKDLASAP 324 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 +I G V L + I +LS A+ G+ + + ++D V V T Sbjct: 325 LIRNGDIVTASLRVKGIVIRGQYKSLSTAARGETVTLVSLD---DVRERVTAVAT 376 >gi|254420864|ref|ZP_05034588.1| flagella basal body P-ring formation protein FlgA [Brevundimonas sp. BAL3] gi|196187041|gb|EDX82017.1| flagella basal body P-ring formation protein FlgA [Brevundimonas sp. BAL3] Length = 203 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138 + + VI+R VR+ G + +S G A+ +A++G+ +AV N + ++ Sbjct: 116 NRPVYRPAGGGQQVIARNDMVRVTYQVGGVNLSIMGKAMRNAALGEPVAVLNTASNRVID 175 Query: 139 GSVVDTGT 146 G Sbjct: 176 AVASGPGQ 183 >gi|329849715|ref|ZP_08264561.1| distal basal body ring component protein [Asticcacaulis biprosthecum C19] gi|328841626|gb|EGF91196.1| distal basal body ring component protein [Asticcacaulis biprosthecum C19] Length = 193 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%) Query: 96 GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 G + + + G +T++ G+A DA++GD+I ++N + M+ V+ +G Sbjct: 125 GEAISVTWSSGGLTLTITGVAQKDAAVGDLIQIQNPSSKKMIDAVVIGSGR 175 >gi|294013080|ref|YP_003546540.1| flagellar protein [Sphingobium japonicum UT26S] gi|292676410|dbj|BAI97928.1| flagellar protein [Sphingobium japonicum UT26S] Length = 182 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + R V+ +G V+++ N ++S +A D ++G I V+ G + VV+ G Sbjct: 114 VAREAVVKKGDPVQLMAGNENFSVSRMMVADEDGAVGQTIRVREDKKGAPILAQVVEMGI 173 Query: 147 VRV 149 VRV Sbjct: 174 VRV 176 >gi|291276510|ref|YP_003516282.1| flagellum ring component [Helicobacter mustelae 12198] gi|290963704|emb|CBG39537.1| Putative flagellum ring component [Helicobacter mustelae 12198] Length = 221 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 1/118 (0%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V + I + + + + ++ + + D+ + + + +I S+ Sbjct: 99 KVVFAKIGIKKSQDITKENTLIKTIPLGALQNS-PIGLSDIDNISAKIFIPSGGMIVNSL 157 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 + +I + I +GNM I IA D + +I N ++ + V+ Sbjct: 158 VANKILIRKNDSFLAIYKEGNMQIQLTLIAKQDGAKDAIIEAYNPESKKTLRVRVLSN 215 >gi|103488384|ref|YP_617945.1| flagellar protein [Sphingopyxis alaskensis RB2256] gi|98978461|gb|ABF54612.1| flagellar protein [Sphingopyxis alaskensis RB2256] Length = 170 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148 V+ RG VR+ + N +IS A IA+ D +GD IA++ D +S +V G R Sbjct: 108 SAPVVRRGDHVRVSIDTPNYSISYAAIAVEDGRVGDSIALRGSDRKSTLSATVTGPGAAR 167 Query: 149 V 149 + Sbjct: 168 I 168 >gi|296282285|ref|ZP_06860283.1| flagellar protein [Citromicrobium bathyomarinum JL354] Length = 192 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM--VSGSVVDTGTVRV 149 V+SRG V I++ G ++S +AL + +IG I V+ + VV G V V Sbjct: 130 VVSRGETVAIVVEGGGFSLSRQAVALEEGAIGSWIKVRPAQDRKAEPLRAQVVRPGQVAV 189 Query: 150 VVK 152 ++ Sbjct: 190 RLR 192 >gi|255620617|ref|XP_002540130.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] gi|223498940|gb|EEF22253.1| Flagella basal body P-ring formation protein flgA precursor, putative [Ricinus communis] Length = 179 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 +++YV + + V+G + + + G+ ++ ++L ++ + + A V+G Sbjct: 95 WTVYVQANVT----VVGDYIAAAAPLVQGQPIDANQLTTLKGDLTMLPAGVATDASQVIG 150 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGA 97 L P + L L V+ G Sbjct: 151 RSATVSLPPGTPLRLDTLRSKPVVQSGQ 178 >gi|148554195|ref|YP_001261777.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1] gi|148499385|gb|ABQ67639.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1] Length = 191 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 + +G V+++ + +IS A+ DA IG + V G + V+D G V Sbjct: 126 SANAAVRKGDPVQLVAQGSSFSISVDATAMEDADIGRRVRVATNSKGSTIFAEVIDVGRV 185 Query: 148 RVV 150 R++ Sbjct: 186 RLI 188 >gi|212716655|ref|ZP_03324783.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM 16992] gi|212660359|gb|EEB20934.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM 16992] Length = 229 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 13/143 (9%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +++ V+ + I G V+ L + N H D VGL Sbjct: 49 AVFAALQCVRLTISTQPVVIAAQPIAKGSVITADSLALRDLPYDEALRNVFHDCDDAVGL 108 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRG---AKVRIILTQGNMTI---------STAGIALS 118 + + + ++ ++ V+ G +VR+ + N+++ + G A Sbjct: 109 IAQVDVAEGGIVTSTMARASPVVPEGYTAIEVRLASSADNLSLGDIVTLSSATIFGEATP 168 Query: 119 DASIG-DVIAVKNIDTGVMVSGS 140 +AS D + ++ + +G +++ Sbjct: 169 EASPDTDAVTLRELCSGAILTAK 191 >gi|316936686|gb|ADU60339.1| FlgA [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 132 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 34/85 (40%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 + G+ V + I G L + + + + I+ + V+ R L P Sbjct: 48 VNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPG 107 Query: 80 HVIPLSVLHRPYVISRGAKVRIILT 104 + L+++ + + + G +V++I Sbjct: 108 QPVQLTMIRQAWRVKAGQRVQVIAN 132 >gi|302383957|ref|YP_003819780.1| flagella basal body P-ring formation protein FlgA [Brevundimonas subvibrioides ATCC 15264] gi|302194585|gb|ADL02157.1| flagella basal body P-ring formation protein FlgA [Brevundimonas subvibrioides ATCC 15264] Length = 210 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%) Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 P VI+R V + + G + ++ G A DA+ G+ + + N+ +G + Sbjct: 128 PQRQARAARVIARNDMVEVAYSVGGVMLTVTGRATRDAAAGESVPILNVASGRTIDAVAT 187 Query: 143 DTGT 146 G Sbjct: 188 GPGR 191 >gi|23466106|ref|NP_696709.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705] gi|23326839|gb|AAN25345.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705] Length = 220 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + L+++ A V VV + I G+++ + ++ + S I ++A +I+DVVG V Sbjct: 50 LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAIGPSWACNIEDVVGKVA 109 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 110 QIDIEAADPISTHMARDAPVAPTGTTV 136 >gi|307293793|ref|ZP_07573637.1| flagellar protein [Sphingobium chlorophenolicum L-1] gi|306879944|gb|EFN11161.1| flagellar protein [Sphingobium chlorophenolicum L-1] Length = 182 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + R V+ +G V+++ + ++S +A D ++G I V+ + VV+ G Sbjct: 114 IAREAVVKKGDPVQLMAGNASFSVSRMMVADEDGAVGQTIRVREDKKAAPILAQVVEMGI 173 Query: 147 VRV 149 VRV Sbjct: 174 VRV 176 >gi|330719627|gb|EGG98195.1| Flagellar basal-body P-ring formation protein flgA [gamma proteobacterium IMCC2047] Length = 205 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 + +YV + V + + + L+ S + + S + Y S+ +V+G Sbjct: 101 WQIYVPVSVKAY----QKVVTAAAPLTREQRLDASVIALTEKEVSRLTQGYYSSVNEVLG 156 Query: 70 LVTRRVLLPDHVIPLSVLHRPYV 92 +R + + VI +++ V Sbjct: 157 KSLKRPVPLNGVIQPNMVVEAIV 179 >gi|225351088|ref|ZP_03742111.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158544|gb|EEG71786.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 229 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 13/129 (10%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 V+ + I G V+ L + N H D VGL+ + + ++ Sbjct: 63 TQPVVIAAQPIAKGSVITADSLALRDLPYDKALRNVFHDCADAVGLIAQVDVAEGGIVTS 122 Query: 85 SVLHRPYVISRG---AKVRIILTQGNMTI---------STAGIAL-SDASIGDVIAVKNI 131 ++ V+S G +VR+ + N+++ + G A + D + ++ + Sbjct: 123 TMARASPVVSEGYTVIEVRLASSADNLSLGDVVTLSSATIFGEATPETSPDTDAVTLREL 182 Query: 132 DTGVMVSGS 140 +G +++ Sbjct: 183 CSGAILTAK 191 >gi|149184201|ref|ZP_01862519.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21] gi|148831521|gb|EDL49954.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21] Length = 88 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG---VMVSGSVVDTGTV 147 +I RG V I+ T++ G A D + G I V+ +G + V+ G V Sbjct: 26 KMIKRGETVSILARGKGFTLTRHGSAAEDGAQGQWIKVR--ASGERLETLRAVVLGPGKV 83 >gi|239620983|ref|ZP_04664014.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516084|gb|EEQ55951.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 208 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + L+++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 38 LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 97 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 98 QIDIEAADPISTHMARDAPVAPTGTTV 124 >gi|227546443|ref|ZP_03976492.1| cation transport ATPase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322689956|ref|YP_004209690.1| hypothetical protein BLIF_1777 [Bifidobacterium longum subsp. infantis 157F] gi|227213100|gb|EEI80979.1| cation transport ATPase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320461292|dbj|BAJ71912.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 189 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + L+++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 19 LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 79 QIDIEAADPISTHMARDAPVAPTGTTV 105 >gi|312133843|ref|YP_004001182.1| flga [Bifidobacterium longum subsp. longum BBMN68] gi|311773134|gb|ADQ02622.1| FlgA [Bifidobacterium longum subsp. longum BBMN68] Length = 189 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + L+++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 19 LFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 79 QIDIEAADPISTHMARDAPVAPTGTTV 105 >gi|323702114|ref|ZP_08113782.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM 574] gi|323532996|gb|EGB22867.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM 574] Length = 234 Score = 47.2 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVP I +L +K + I+ A KDVVG VTR L P+ I LS L Sbjct: 41 VVVPKQTIGPNTMLTAQMVKVKDIPVEMIQPGTAMDTKDVVGKVTRSDLYPEEPILLSRL 100 Query: 88 HR 89 H+ Sbjct: 101 HQ 102 >gi|317483025|ref|ZP_07942027.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|316915526|gb|EFV36946.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 208 Score = 47.2 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + ++++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 38 LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 97 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 98 QIDIEAADPISTHMARDAPVAPTGTTV 124 >gi|46190327|ref|ZP_00121647.2| COG2217: Cation transport ATPase [Bifidobacterium longum DJO10A] gi|189440534|ref|YP_001955615.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium longum DJO10A] gi|189428969|gb|ACD99117.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium longum DJO10A] Length = 189 Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + ++++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 19 LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 79 QIDIEAADPISTHMARDAPVAPTGTTV 105 >gi|253577450|ref|ZP_04854765.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843150|gb|EES71183.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 377 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 32/69 (46%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V + I AG+ L ++ ++V ++ + + + VVG + + L + + S+ Sbjct: 65 RILVAARPIPAGKTLGNGDIQAVEVVHALVPSDSFKDPQMVVGKIAKIDLQSNTPLIASM 124 Query: 87 LHRPYVISR 95 L+ I R Sbjct: 125 LYEEGAIPR 133 >gi|322691896|ref|YP_004221466.1| hypothetical protein BLLJ_1707 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456752|dbj|BAJ67374.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 189 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + ++++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 19 LFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 79 QIDIEAADPISTHMARDAPVAPTGTTV 105 >gi|261406226|ref|YP_003242467.1| SAF domain-containing protein [Paenibacillus sp. Y412MC10] gi|261282689|gb|ACX64660.1| SAF domain protein [Paenibacillus sp. Y412MC10] Length = 367 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + A VP I G + +KE+++ GN +++ G + LL I Sbjct: 66 MQAAWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLQGMPITG 125 Query: 85 SVL 87 ++L Sbjct: 126 AML 128 >gi|291516490|emb|CBK70106.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium longum subsp. longum F8] Length = 189 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + ++++ A V VV + I G+++ + ++ + S ++ +I+DVVG V Sbjct: 19 LFGIEAVLAVVKTEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIEDVVGKVA 78 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 79 QIDIEAADPISTHMARDAPVAPTGTTV 105 >gi|320459290|dbj|BAJ69911.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 172 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Query: 13 YVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 + L+++ A V VV + I G+++ ++ + S I ++A +I+DVVG V Sbjct: 1 MLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKV 60 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 61 AQIDIEAADPISTHMARDAPVTPTGTTV 88 >gi|257068486|ref|YP_003154741.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810] gi|256559304|gb|ACU85151.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810] Length = 211 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + G L+ + L+ ++ + A I+DVVG R + P + +L Sbjct: 50 VVADAELTPGTALSRADLRTARIAPELLPEGAAQQIEDVVGQTARLPIEPGTPLLPGLLE 109 Query: 89 RPYV 92 P Sbjct: 110 DPAA 113 >gi|294508676|ref|YP_003572735.1| flagellar protein flgA [Salinibacter ruber M8] gi|294345005|emb|CBH25783.1| Flagellar protein flgA [Salinibacter ruber M8] Length = 242 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 5/129 (3%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-----RGNYAHSIKDVVGLVT 72 +L + + I G + ++ + S++ R + + + LV Sbjct: 102 ATLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVA 161 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 R L P+ V+ + PY + G + +G ++ + + D++ V D Sbjct: 162 DRYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVSFRLSCTVRETGFVEDLVRVYCPD 221 Query: 133 TGVMVSGSV 141 T V Sbjct: 222 TRKTYQARV 230 >gi|306817241|ref|ZP_07450987.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307700399|ref|ZP_07637438.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris FB024-16] gi|304649921|gb|EFM47200.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307614384|gb|EFN93614.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris FB024-16] Length = 198 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 13/102 (12%) Query: 4 VRFLLFFSLYVLSL-----------DSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQ 50 +RF F++ ++F A+V V I AG +N L+E + Sbjct: 1 MRFKRFWNWRFPLAAASAALALVVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERR 60 Query: 51 VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + + +Y +V G L P V+ +L + Sbjct: 61 LDPGALPQHYFVQAGEVAGKKAAVALEPGTVVAPGLLLENSL 102 >gi|227876349|ref|ZP_03994461.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC 35243] gi|269975913|ref|ZP_06182917.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris 28-1] gi|227842890|gb|EEJ53087.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC 35243] gi|269935741|gb|EEZ92271.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris 28-1] Length = 198 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 13/102 (12%) Query: 4 VRFLLFFSLYVLSL-----------DSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQ 50 +RF F++ ++F A+V V I AG +N L+E + Sbjct: 1 MRFKRFWNWRFPLAAALAALALVVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERR 60 Query: 51 VTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + + +Y +V G L P V+ +L + Sbjct: 61 LDPGALPQHYFVQAGEVAGKKAAVALEPGTVVAPGLLLENSL 102 >gi|213693112|ref|YP_002323698.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|296454899|ref|YP_003662043.1| SAF domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|213524573|gb|ACJ53320.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|296184331|gb|ADH01213.1| SAF domain protein [Bifidobacterium longum subsp. longum JDM301] Length = 208 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Query: 14 VLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + L+++ A V VV + I G+++ ++ + S I ++A +I+DVVG V Sbjct: 38 LFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKVA 97 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKV 99 + + I + V G V Sbjct: 98 QIDIEAADPISTHMARDAPVTPTGTTV 124 >gi|332798621|ref|YP_004460120.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1] gi|332696356|gb|AEE90813.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1] Length = 264 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 5/139 (3%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ L S S V + I + + +T S+ NY Sbjct: 16 VTCISLYLIVSNLQKGGSIALNSKTITVVTATQNIAPYTKITAEMVSAQNITASDGIQNY 75 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST---AGIA- 116 I DVVG + + + VI + + IS G ++ +TI+ G+A Sbjct: 76 FTQIGDVVGKICKSDIYAGEVITSNRIAGEKDISLGLATQLENGMRAVTIAVDVEQGVAA 135 Query: 117 -LSDASIGDVIAVKNIDTG 134 + + DVI V +D G Sbjct: 136 TIKAGNYVDVIYVNKVDGG 154 >gi|94969951|ref|YP_591999.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis Ellin345] gi|94552001|gb|ABF41925.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis Ellin345] Length = 180 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Query: 74 RVLLPDHVIP--LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131 R + V+ G ++ +I + ++T ++LS +G+ I V+ Sbjct: 101 RPQNIGNPSRSLTHQPRPAPVVHAGNRLTLIRQGNGVRLTTTVVSLSAGRVGESIHVREY 160 Query: 132 DTGVMVSGSVVDTGTV 147 + ++ VVD TV Sbjct: 161 RSSRSINSVVVDAHTV 176 >gi|239908022|ref|YP_002954763.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus RS-1] gi|239797888|dbj|BAH76877.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus RS-1] Length = 300 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 3 CVRFLLFFSLYVLSLDSLFASVI-GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 +R+ S+ ++ + VV + I G L+ S +K Sbjct: 23 TIRW--LGSVRAPKVEQAKPAAPKVEVVVAARAIPKGGRLDASMVKSKGFEAEAAPQGAL 80 Query: 62 HSIKDVVGLVTRRVLLPDHVIPL 84 +++ G ++ R + PD I Sbjct: 81 RDVQEAYGRISARDISPDDPITP 103 >gi|256833036|ref|YP_003161763.1| SAF domain-containing protein [Jonesia denitrificans DSM 20603] gi|256686567|gb|ACV09460.1| SAF domain protein [Jonesia denitrificans DSM 20603] Length = 241 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 L+ S+++ + + A V + + G+ + E+ L+ + V NY Sbjct: 36 LVALSVWIGAWALDSGRTLDTAFVAARTLQPGDAITEADLQAVDVELGQHLNNYLTPETM 95 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVI 93 GLV + ++ ++ + Sbjct: 96 GEGLVAVVPVHQGQLVAVTSTGSAADV 122 >gi|329930829|ref|ZP_08284228.1| SAF domain protein [Paenibacillus sp. HGF5] gi|328934531|gb|EGG31036.1| SAF domain protein [Paenibacillus sp. HGF5] Length = 367 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A VP I G + +KE+++ GN +++ G + LL I ++L Sbjct: 69 AWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLRGMPITGAML 128 >gi|310288050|ref|YP_003939309.1| hypothetical protein BBIF_1530 [Bifidobacterium bifidum S17] gi|309251987|gb|ADO53735.1| conserved hypothetical protein [Bifidobacterium bifidum S17] Length = 219 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 36/112 (32%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + + + V VV + +I G + ++ Q+ S+ + Sbjct: 32 CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 91 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 G + + + + +++ R V G V + G + AG + Sbjct: 92 AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143 >gi|224283683|ref|ZP_03647005.1| hypothetical protein BbifN4_07627 [Bifidobacterium bifidum NCIMB 41171] Length = 213 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 36/112 (32%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + + + V VV + +I G + ++ Q+ S+ + Sbjct: 26 CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 85 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 G + + + + +++ R V G V + G + AG + Sbjct: 86 AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 137 >gi|94495417|ref|ZP_01301997.1| flagellar protein [Sphingomonas sp. SKA58] gi|94424805|gb|EAT09826.1| flagellar protein [Sphingomonas sp. SKA58] Length = 193 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 V+ +G V+++ + ++S IA ++GD I V+ V +VD G VR+ Sbjct: 130 VVRKGDPVQLMAGNASFSVSRMMIADEGGAVGDTIRVREDRKSPPVFAQIVDMGVVRI 187 >gi|311064926|ref|YP_003971652.1| hypothetical protein BBPR_1589 [Bifidobacterium bifidum PRL2010] gi|313140839|ref|ZP_07803032.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171] gi|310867246|gb|ADP36615.1| Conserved hypothetical protein [Bifidobacterium bifidum PRL2010] gi|313133349|gb|EFR50966.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171] Length = 219 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 36/112 (32%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 + + + V VV + +I G + ++ Q+ S+ + Sbjct: 32 CTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQ 91 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118 G + + + + +++ R V G V + G + AG + Sbjct: 92 AAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143 >gi|315646608|ref|ZP_07899726.1| SAF domain protein [Paenibacillus vortex V453] gi|315278251|gb|EFU41571.1| SAF domain protein [Paenibacillus vortex V453] Length = 365 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A VP I G + +KE+++ N +++ G + LL I ++L Sbjct: 69 AWVPVRDIPPGHFIEAKDIKEVRLPYEGASNNLLSVKEEIAGKGVKIELLQGTPITRTML 128 >gi|85710157|ref|ZP_01041222.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1] gi|85688867|gb|EAQ28871.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1] Length = 182 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%) Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145 V++RG + I + T+ AG A+ + S GD IAV+ V + G Sbjct: 118 KAEPVVTRGDPLTIAVRGRGFTVQQAGEAMENGSPGDWIAVRTSRDAQPVRARIERPG 175 >gi|103487065|ref|YP_616626.1| N-acylneuraminate-9-phosphate synthase [Sphingopyxis alaskensis RB2256] gi|98977142|gb|ABF53293.1| N-acetylneuraminate synthase [Sphingopyxis alaskensis RB2256] Length = 749 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ ++V + I AG+ + + ++ + Y ++VG + +R ++ Sbjct: 400 EVLAKSLVAARPIRAGQQIADEDIQIR--SPGQGLQPYFR--AELVGRIAKRDMIEGDFF 455 Query: 83 PLSVLHRPYVISR 95 S L +R Sbjct: 456 FQSDLADAVASAR 468 >gi|269836549|ref|YP_003318777.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM 20745] gi|269785812|gb|ACZ37955.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM 20745] Length = 326 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 F + + D + VV + I A VL+E ++ +V + + A + VV Sbjct: 27 FSGVLGETQDDGAEPTKANVVVAARDIPANTVLSEDDIEIAEVDATGVAPGSATAPAQVV 86 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYV 92 G+ L+ I + L P + Sbjct: 87 GMAVSGNLVKGQQILSANLLAPGL 110 >gi|168699692|ref|ZP_02731969.1| hypothetical protein GobsU_09224 [Gemmata obscuriglobus UQM 2246] Length = 282 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 ++ +V + ++ + + G A SD +G + V+N ++ +V V G Sbjct: 217 VLVRARQRVEVSVSSVGLKMIMTGEAQSDGLLGQTVMVQNSESKKLVPAKVTGAGK 272 >gi|134299960|ref|YP_001113456.1| SAF domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052660|gb|ABO50631.1| SAF domain protein [Desulfotomaculum reducens MI-1] Length = 234 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 32/62 (51%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VVP+ + ++ + +K + I+ A + +DVVG +TR L P+ I L+ + Sbjct: 41 VVVPTQPLGPKTLITDKMVKVKDIPVELIQPGTAIAPQDVVGKITRSELYPEEPIMLNRI 100 Query: 88 HR 89 ++ Sbjct: 101 YK 102 >gi|332982956|ref|YP_004464397.1| SAF domain-containing protein [Mahella australiensis 50-1 BON] gi|332700634|gb|AEE97575.1| SAF domain protein [Mahella australiensis 50-1 BON] Length = 211 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 + INAG + E+ L MQV N+ I + DV+G P +I L Sbjct: 35 LTAKTTINAGMKIEETMLDTMQVPNTAIPSGAMTDVNDVIGKTAAVTRAPGDIIFRDALS 94 Query: 89 RPYVISR 95 + + Sbjct: 95 EQEPVLK 101 >gi|326386924|ref|ZP_08208538.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM 19370] gi|326208604|gb|EGD59407.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM 19370] Length = 168 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%) Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149 VI RG V + +T +S + A+ ++G I V+ V VV G V V Sbjct: 107 PVIQRGQLVTVAVTGDGFAVSQSAEAMEAGAVGAWIRVRTGPKTDPVQARVVRPGLVEV 165 >gi|306823596|ref|ZP_07456971.1| SAF domain protein [Bifidobacterium dentium ATCC 27679] gi|309802885|ref|ZP_07696986.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022] gi|304553303|gb|EFM41215.1| SAF domain protein [Bifidobacterium dentium ATCC 27679] gi|308220352|gb|EFO76663.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022] Length = 213 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 18/142 (12%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 +++ + AVV + I G+ + S + + N H+I DV G+V Sbjct: 40 VFLGLQCLRSTAETRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMV 99 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM----------TISTAGIALS 118 + + ++ ++ +I +G VR+ + + + G A Sbjct: 100 AQIDIPDGGIVTATMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGD 159 Query: 119 DASIGDVIAVKNIDTGVMVSGS 140 D ++ + + V G Sbjct: 160 DGGA-----LRELASRATVIGK 176 >gi|229587471|ref|YP_002860509.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657] gi|229260129|gb|ACQ51166.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657] Length = 242 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 36/71 (50%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +L S ++ VIN GE++NE ++E + +NI N + KD++G +T L Sbjct: 42 LPTLNKSSKAPVIIAKRVINEGELINEGDIEEKIMPINNIAKNTINVKKDLIGKITVNKL 101 Query: 77 LPDHVIPLSVL 87 P+ I + Sbjct: 102 EPNEQIKKYDV 112 >gi|315452623|ref|YP_004072893.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter felis ATCC 49179] gi|315131675|emb|CBY82303.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter felis ATCC 49179] Length = 223 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 40 VLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99 VL + + I +Y ++ T+ L + ++ + + ++ + Sbjct: 119 VLYAQSVPFERFNTLPIDSSYINNSS------TKSFLGANTLLSVDKVAPKILVYKNEIF 172 Query: 100 RIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147 LT G++++ T+ AL + S+ VI N+ + V + G V Sbjct: 173 SATLTSGSISLETSLQALQNGSLNQVIEALNVQSKKRVQVRITGLLKGEV 222 >gi|160940635|ref|ZP_02087978.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC BAA-613] gi|158436370|gb|EDP14137.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC BAA-613] Length = 288 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 22/128 (17%) Query: 20 LFASVIGHAVVPSVV---------------INAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 L A+VI +P V + G+ + L+ ++V + N+ + A + Sbjct: 15 LLAAVIAFVAIPVVTKKTSSTLEIVRVVNPLERGQQITAQDLELIEVGSYNLPASVAIRL 74 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS----TAGIALSDA 120 +DV G L+P I + + + + G + IS T ALSD Sbjct: 75 EDVTGTYAAASLMPGDYILPNKVSSSPL--SSDPALYSIPDGMVAISVTTQTLATALSDK 132 Query: 121 -SIGDVIA 127 GD+I Sbjct: 133 LQSGDIIR 140 >gi|167628702|ref|YP_001679201.1| hypothetical protein HM1_0585 [Heliobacterium modesticaldum Ice1] gi|167591442|gb|ABZ83190.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1] Length = 270 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 10/142 (7%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ LF V L + S V + I AGE + +K ++V + N+ N Sbjct: 14 CIALSLFICFAVTPLFNSGISKKTDIVRVARDIKAGEQITRDMVKTVEVGSYNLPDNVVR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S+ +G + P I + L + + M+++ + S+ Sbjct: 74 SLDAALGKYAAADMAPGDYILNTKLTDSPAAENAYLYNLTGEKQAMSVTIK--SFSNGLS 131 Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144 G +I +G +VS V+ Sbjct: 132 GKLI------SGDIVS--VIAP 145 >gi|89098203|ref|ZP_01171088.1| hypothetical protein B14911_10592 [Bacillus sp. NRRL B-14911] gi|89087060|gb|EAR66176.1| hypothetical protein B14911_10592 [Bacillus sp. NRRL B-14911] Length = 326 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Query: 8 LFFSLYVLSLDSLFASVIGH-------AVV-PSVVINAGEVLNESRLKEMQVTNSNIRGN 59 + S++V++ ++ +VI A+V P VVI +V+++ L Q + + Sbjct: 11 VLLSVFVIAFIIVWDTVIKDKIDSVEVAIVRPGVVIEKNQVISKDLLMMEQRNRATLVEG 70 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 + + DVVG ++ L + ++ + Sbjct: 71 TVYDMDDVVGYEAKQKLYGNSILSERDVE 99 >gi|237752267|ref|ZP_04582747.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter winghamensis ATCC BAA-430] gi|229376509|gb|EEO26600.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter winghamensis ATCC BAA-430] Length = 303 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 69 GLVTRRVLLP-DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 G V R P D +I L V+ +G ++ I + + + + A DA++GDVI Sbjct: 221 GRVAVRSYTPKDVIITRDRLISKRVVKKGDRILISVVENGVLLEFTLEAQKDAAVGDVIK 280 Query: 128 VKNIDTGVMVSGSVVDTGT 146 + I+ +++ G Sbjct: 281 ARVINGKKTYEVEIIEEGK 299 >gi|171741303|ref|ZP_02917110.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC 27678] gi|283455337|ref|YP_003359901.1| hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1] gi|171276917|gb|EDT44578.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC 27678] gi|283101971|gb|ADB09077.1| Hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1] Length = 213 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 18/129 (13%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 AVV + I G+ + S + + N H+I DV G+V + + ++ Sbjct: 53 TRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMVAQIDIPDGGIVTA 112 Query: 85 SVLHRPYVISRGAK---VRIILTQGNM----------TISTAGIALSDASIGDVIAVKNI 131 ++ +I +G VR+ + + + G A D ++ + Sbjct: 113 TMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGDDGGA-----LREL 167 Query: 132 DTGVMVSGS 140 + V G Sbjct: 168 ASRATVIGK 176 >gi|169834865|ref|YP_001715910.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch Maree] gi|169408972|gb|ACA57382.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch Maree] Length = 242 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 36/71 (50%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 L +L S ++ VI+ GE++NE ++E + +NI N + KD++G +T L Sbjct: 42 LPTLNKSSKAPVIIAKRVISEGELINEGDIEEKIMPINNIAKNTINVKKDLIGKITVNKL 101 Query: 77 LPDHVIPLSVL 87 P+ I + Sbjct: 102 EPNEQIKKYDV 112 >gi|83815670|ref|YP_446740.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855] gi|83757064|gb|ABC45177.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855] Length = 242 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 5/129 (3%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-----RGNYAHSIKDVVGLVT 72 +L + + I G + ++ + S++ R + + + LV Sbjct: 102 ATLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVA 161 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 R L P+ V+ + PY + G + +G + + + DV+ V Sbjct: 162 DRYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVRFRLSCTVRETGFVEDVVRVYCPG 221 Query: 133 TGVMVSGSV 141 T V Sbjct: 222 TRKTYQARV 230 >gi|329945240|ref|ZP_08293071.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 170 str. F0386] gi|328529283|gb|EGF56204.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 170 str. F0386] Length = 261 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +V + ++AG ++ E + ++ S++ + S + VVG L P V+ S+ Sbjct: 27 VLVAARQVSAGTLITEQDVTTSRLPASSLPQSGLASSEQVVGTRAAITLEPGTVLTSSMT 86 Query: 88 H 88 Sbjct: 87 S 87 >gi|332187912|ref|ZP_08389645.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17] gi|332012073|gb|EGI54145.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17] Length = 165 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146 + VI RG V I +I+ G+A++DA+ G V+ + + +G Sbjct: 98 VKAEPVIRRGDPVVIEAGSDGFSITREGVAMADAAPGGHFPVRIDAARQPIQAVALASGR 157 >gi|160893683|ref|ZP_02074467.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50] gi|156864668|gb|EDO58099.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50] Length = 286 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 7/131 (5%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V I+ GE + +K ++V + N+ + Sbjct: 14 CIVLSLIICFAVTPLFNKAMSEKTEIVRVVKPISVGEEITSDMVKTIEVGSYNLPDDVVK 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120 VVG L P I S + + + ++++ A ++ Sbjct: 74 HSDTVVGAFASADLAPGDYILTSKIAEEPAAENAYLYHLTGEKQAISVTVK--AFANGLS 131 Query: 121 ---SIGDVIAV 128 GD+++V Sbjct: 132 GKLKSGDIVSV 142 >gi|313682363|ref|YP_004060101.1| flagella basal body p-ring formation protein flga [Sulfuricurvum kujiense DSM 16994] gi|313155223|gb|ADR33901.1| flagella basal body P-ring formation protein FlgA [Sulfuricurvum kujiense DSM 16994] Length = 287 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 1/76 (1%) Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 R L ++ + + ++ + KV + + + + A + ++ D+I ++ D Sbjct: 211 RSNLKGGQLLTVRNIETIPLVLKNEKVIVEVQDKGVIVEFGARATQEGALYDIITIQKND 270 Query: 133 TGVMVSGSVVDTGTVR 148 G V+ V Sbjct: 271 -GKRAKAKVIGENRVE 285 >gi|148253053|ref|YP_001237638.1| hypothetical protein BBta_1513 [Bradyrhizobium sp. BTAi1] gi|146405226|gb|ABQ33732.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 309 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 28/144 (19%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH----SIKDVVGLVTRRVLLPDHVIP 83 +V + I G +L + + V +R Y S + +G ++RR D + Sbjct: 47 VLVAARTIALGTLLRKEDIAWKDVMPGEVRPGYLMRGQVSEAEFLGAISRRNFAQDEPLI 106 Query: 84 LSVLHRP-------YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT--- 133 S +P V+ G++ I S AG+AL GD + V + Sbjct: 107 ASEFVKPGDRQFLAAVLKPGSRAISIFVDAAQ--SAAGMAL----PGDRVDVILTQSFGE 160 Query: 134 ------GVMVSGSVVDTGTVRVVV 151 VS +++ VRV+ Sbjct: 161 QATDPGRKTVSETMLRD--VRVIA 182 >gi|253997846|ref|YP_003049909.1| N-acylneuraminate-9-phosphate synthase [Methylovorus sp. SIP3-4] gi|253984525|gb|ACT49382.1| N-acylneuraminate-9-phosphate synthase [Methylovorus sp. SIP3-4] Length = 756 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ ++V + I GE ++E + S RG + D++G+ R + P V Sbjct: 398 EVLAKSLVAARAIRKGEKISEEMINAR----SPGRGLQPSRLNDLLGISACRDMAPGDVF 453 Query: 83 PLSVL 87 S + Sbjct: 454 FESDI 458 >gi|258405292|ref|YP_003198034.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM 5692] gi|257797519|gb|ACV68456.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM 5692] Length = 295 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A VV ++ I+AG L E L+ Q N+ ++G V + Sbjct: 45 APSTQEVVVAALDISAGSQLTEEMLQTGQYLKKNLPPGSFTDPDQLLGRVALAPFKKNEP 104 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 I L P I G V ++++GN +S G Sbjct: 105 IVDHRL-APTDIKSG-GVSALISKGNRAVSLGG 135 >gi|119025306|ref|YP_909151.1| hypothetical protein BAD_0288 [Bifidobacterium adolescentis ATCC 15703] gi|118764890|dbj|BAF39069.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703] Length = 266 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +++ A VV + G + ++ + + N H++ D VGL Sbjct: 66 TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREDVELREAPSDGSLSNAFHTLDDAVGL 125 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108 + + + V+ + V+ +G VR+ G + Sbjct: 126 IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVAGGL 166 >gi|283780138|ref|YP_003370893.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068] gi|283438591|gb|ADB17033.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068] Length = 328 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 V+ RG VR+ +T++T+ A++D +IG+VI ++ VS VV Sbjct: 250 AKRDARGEIVVKRGESVRVRAIAAGVTVTTSAKAMADGAIGEVIELEVDGHRSRVSARVV 309 Query: 143 DTGTVRV 149 + + Sbjct: 310 APQLLEI 316 >gi|295395660|ref|ZP_06805852.1| flp pilus assembly protein CpaB [Brevibacterium mcbrellneri ATCC 49030] gi|294971476|gb|EFG47359.1| flp pilus assembly protein CpaB [Brevibacterium mcbrellneri ATCC 49030] Length = 259 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 11/128 (8%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 + + +YV ++ S V I A + + + L+ V N I + Sbjct: 19 AIMVFIAVVVYVQNVSSKVGP-TTEVYVAKEDITAFQPIEQDMLETKTVPNRYITEDMVT 77 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S++ V G + I + I G + ++I+ G A + Sbjct: 78 SLEQVAGQKASVKISAGSFIQTDAIEPASSIEDGQR--------EISITFVGDAGVSGRV 129 Query: 123 --GDVIAV 128 GD + V Sbjct: 130 SPGDKVDV 137 >gi|160942271|ref|ZP_02089580.1| hypothetical protein CLOBOL_07157 [Clostridium bolteae ATCC BAA-613] gi|158434828|gb|EDP12595.1| hypothetical protein CLOBOL_07157 [Clostridium bolteae ATCC BAA-613] Length = 289 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 13/141 (9%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + + + S V + I G+ + + +K ++V N+ + Sbjct: 14 CIVLSLVICFAITPMFNRTISEKTEIVRVTKNIRIGDEITKDMVKPVEVGAYNLPESVVR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 +I +V+G + P I S + + + +++S A Sbjct: 74 NIDEVIGKYASADMAPGDYIIRSKVAEEPAAENAYLYNLNGEKQAISVSVKAFA------ 127 Query: 123 GDVIAVKNIDTGVMVSGSVVD 143 N +G +VSG +V Sbjct: 128 -------NGLSGKLVSGDIVS 141 >gi|283769331|ref|ZP_06342230.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219] gi|283103988|gb|EFC05372.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219] Length = 228 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 40/84 (47%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 ++F +L+++S + + V S I A + + E L+ +V + + A + Sbjct: 15 TMVFLALFLISSSAGRGAQSTAVYVASKNIKANQQITEDMLEYKKVPGNLVVEGAAKNKD 74 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHR 89 +++G + + +L + VI +++ Sbjct: 75 ELLGKMAKVDILKNSVISKENVYK 98 >gi|169834850|ref|YP_001715940.1| SAF domain-containing protein [Clostridium botulinum A3 str. Loch Maree] gi|169408957|gb|ACA57367.1| SAF domain family [Clostridium botulinum A3 str. Loch Maree] Length = 208 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 + F V + S V IN G+++ E ++ +++N N+ + S KD+ Sbjct: 12 ILFLFTVFYIILKNVSGTTKVAVLKNDINKGKIITEQDVETKEISNKNVLPDIVLSPKDI 71 Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89 VG + L + IP ++ Sbjct: 72 VGKSLKVDRLQNDFIPKKIIGD 93 >gi|303233382|ref|ZP_07320051.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4] gi|302480511|gb|EFL43602.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4] Length = 335 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + G+V+ S + + + + ++DVVG + L + I + Sbjct: 51 VVSTKALRVGDVIEPSDVVKRDWVSMLAPADAYTRMEDVVGKTVKVPLSENAPITQTTFA 110 Query: 89 R 89 Sbjct: 111 A 111 >gi|85859140|ref|YP_461342.1| flp pilus assembly protein [Syntrophus aciditrophicus SB] gi|85722231|gb|ABC77174.1| flp pilus assembly protein [Syntrophus aciditrophicus SB] Length = 295 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 36/108 (33%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 V L + + + + VV + + VL + ++ ++ Y Sbjct: 20 VTLLAYNWIQKTATAKAKPQEMQKVVVAAFDVPWSTVLTKDMVRTATFLKESLPNGYYLD 79 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 +VG + + + I + L + + G I ++ M++ Sbjct: 80 PAQIVGRTVIQPIRTNEPITEARLAPTSIRTGGVAAVITPSKRAMSVK 127 >gi|294790464|ref|ZP_06755622.1| SAF domain protein [Scardovia inopinata F0304] gi|294458361|gb|EFG26714.1| SAF domain protein [Scardovia inopinata F0304] Length = 281 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 18/113 (15%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 ++ + I+AG ++ S L +++ G S + VG + Sbjct: 88 VWSSLQYLAAFQAQASVITAKHSISAGSTIDSSDLVLSFQRTNSLTGTTVRSESEAVGKI 147 Query: 72 TRRVLLPDHVIPLSVLHRPY------------------VISRGAKVRIILTQG 106 R I + L ++ G KV +I + Sbjct: 148 ARISFNKGDPILPAGLSSAPTYPKDYTTLTISPASTSAILRAGQKVDLISSSP 200 >gi|221195348|ref|ZP_03568403.1| SAF domain protein [Atopobium rimae ATCC 49626] gi|221184535|gb|EEE16927.1| SAF domain protein [Atopobium rimae ATCC 49626] Length = 262 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 23/72 (31%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + + + + VV + I AG+ ++ S + + + D++G + Sbjct: 39 VIERYGGEVVNLVVATKPIEAGDTISSSNTQVKSWVSDLAPEGSFTNADDIMGKQVTIPI 98 Query: 77 LPDHVIPLSVLH 88 + Sbjct: 99 SAGTPLTKLNFR 110 >gi|270284475|ref|ZP_05966188.2| putative hemagglutinin-related protein [Bifidobacterium gallicum DSM 20093] gi|270276969|gb|EFA22823.1| putative hemagglutinin-related protein [Bifidobacterium gallicum DSM 20093] Length = 257 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 9/111 (8%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG------NYA 61 + +YV+ + VV I G V+ + ++ Q ++ G + A Sbjct: 11 VALLVYVVLGAVMGLHATRQVVVARHTIERGSVIGATDVQYQQFPATDSAGSTTPWADAA 70 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMT 109 ++ V + + + V+ L ++ + V+ G V++ +T Sbjct: 71 DDLQLVSNHIAQFTITAGSVVFLDMVAQQPVLQAGQTIVDVQLASRSQALT 121 >gi|330830433|ref|YP_004393385.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565] gi|328805569|gb|AEB50768.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565] Length = 296 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNY---AHSIKDVV 68 +SL + +V + + AG ++ L+ + + N+ G + K + Sbjct: 37 PPAESLAPDRVAQVLVAAHRVQAGSFIHPEDLRWQALPEAEERNLPGLFLFGFTDTKALK 96 Query: 69 GLVTRRVLLPDHVIPLSVLHRP 90 G + R L ++ L RP Sbjct: 97 GSLVTRTLEAGQIVSADDLVRP 118 >gi|87301557|ref|ZP_01084397.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701] gi|87283774|gb|EAQ75728.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701] Length = 300 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 18/135 (13%) Query: 5 RFLLFFSLYVLSLDSLFASVI-GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 R+ F + L+L A+VP V + GE L + L Q +R A Sbjct: 4 RWFNFLATAPLALTLAIGPAASAQALVPYVYVPKGEELEAAGLGIAQAATRLLRLGQADD 63 Query: 64 IKDVVGLVTRRVLLPDHV-----IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI--- 115 + GL LLP+ + + L + + G + + GI Sbjct: 64 AARLAGLTV--QLLPNDPRGWVLLAEAQLRSNQIKAAGQS---LARAKQLDPRNPGIWFA 118 Query: 116 ----ALSDASIGDVI 126 AL D G I Sbjct: 119 EGSLALRDGQPGQAI 133 >gi|308069314|ref|YP_003870919.1| SAF domain protein [Paenibacillus polymyxa E681] gi|305858593|gb|ADM70381.1| SAF domain protein [Paenibacillus polymyxa E681] Length = 328 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 G AVV I+ GE + + LK ++V +S N +V G + L V+ + Sbjct: 65 GWAVV--RDISPGEQIASNDLKGIKVPSSQTPSNLLTDKSEVSGTTAKIELKKGSVLTSA 122 Query: 86 VL 87 ++ Sbjct: 123 MI 124 >gi|310642358|ref|YP_003947116.1| saf domain protein [Paenibacillus polymyxa SC2] gi|309247308|gb|ADO56875.1| SAF domain protein [Paenibacillus polymyxa SC2] Length = 325 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 9/105 (8%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 G AVV I+ GE + + LK ++V S N + +V G + L V+ Sbjct: 64 TGWAVV--RDISPGEQITSNDLKGIKVPGSQAPSNLLANKNEVSGTTAKIELKKGSVLTS 121 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129 ++ I+ L + + +L D I ++ Sbjct: 122 AM------ITANEPTPKDLRNRELKVVVLPSSLKSGDEVD-IRIQ 159 >gi|302387441|ref|YP_003823263.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1] gi|302198069|gb|ADL05640.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1] Length = 277 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 9/142 (6%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + L + + V + I GE + + ++ ++V N+ + Sbjct: 14 CIVLSLLICFAITPLFNQSITQKTEIVRVTKPIKIGETITKDMVQTVEVGGYNLPEDVVR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 V+G L P I S + + + +++S A Sbjct: 74 HTDTVIGKFASADLAPGDYIIASKIADAPAAENAYLYNLTGEKQAISVSVKSFA--AGLS 131 Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144 G +I +G +VS V Sbjct: 132 GKLI------SGDIVS-IVAPD 146 >gi|229587502|ref|YP_002860540.1| SAF domain family [Clostridium botulinum Ba4 str. 657] gi|229260297|gb|ACQ51334.1| SAF domain family [Clostridium botulinum Ba4 str. 657] Length = 208 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%) Query: 4 VRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++F + L++ L + S +V IN G+++ E ++ +++N N+ + Sbjct: 5 LKFGVIGILFLFVLFYIILKNVSGTTKVIVLKNDINKGKIITEQDVETKEISNKNVLPDI 64 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL 103 + KD+VG + L + IP ++ + + +V + + Sbjct: 65 VLNQKDIVGKSLKVDRLQNDFIPKKIIGDTAIKLKSNEVLLTI 107 >gi|67921374|ref|ZP_00514892.1| N-acylneuraminate-9-phosphate synthase [Crocosphaera watsonii WH 8501] gi|67856486|gb|EAM51727.1| N-acylneuraminate-9-phosphate synthase [Crocosphaera watsonii WH 8501] Length = 748 Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + GEV+ E+ ++ S +G + K+++G +R L S L + + Sbjct: 412 LQPGEVITEAMIEVK----SPGKGLQPNRRKELIGKKAKRPLKIGDFFFASDLEEAQITA 467 Query: 95 RG 96 + Sbjct: 468 KN 469 >gi|288561702|ref|YP_003429108.1| SAF domain-containing protein [Bacillus pseudofirmus OF4] gi|288548334|gb|ADC52216.1| SAF domain protein [Bacillus pseudofirmus OF4] Length = 307 Score = 42.1 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 ++A A + I AGE + E+ L+E+ ++ + +++G + + L P Sbjct: 56 IWADQQVKAFTANRYIEAGETIEENDLREVLLSAETAAED-ITHYDELLGSIAKVNLEPR 114 Query: 80 HVIPLSVL 87 V+ S+L Sbjct: 115 TVLTDSIL 122 >gi|294786498|ref|ZP_06751752.1| LPXTG-motif cell wall anchor domain protein [Parascardovia denticolens F0305] gi|315226071|ref|ZP_07867859.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] gi|294485331|gb|EFG32965.1| LPXTG-motif cell wall anchor domain protein [Parascardovia denticolens F0305] gi|315120203|gb|EFT83335.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] Length = 274 Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 2/92 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58 + + SL L + +V + A V + I+ G+ ++ + ++++ + + Sbjct: 67 LKKIATAFLISLMAFCLIQIGLTVSSNQSAFVAARDISQGQEIHPGDIAQVRMRTNPLAT 126 Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 S V+G L + + + Sbjct: 127 RTVKSASAVLGRRAAIPLRKGDPLVPTAVKAA 158 >gi|303248301|ref|ZP_07334563.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ] gi|302490326|gb|EFL50238.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ] Length = 304 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 1/70 (1%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V + I G L+ + L+ + G ++ + G V R + D I Sbjct: 47 DVLVAARAIPKGARLDAAMLRLKPYEAEAVPGGALRAVAEAEGRVAARDISKDDPITPDK 106 Query: 87 LHRPYVISRG 96 L ++RG Sbjct: 107 L-MAKGVTRG 115 >gi|289178132|gb|ADC85378.1| hypothetical protein BIF_01377 [Bifidobacterium animalis subsp. lactis BB-12] Length = 223 Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +L+ A+ AVV + ++AG V+ ++ +++ + + + D VGL Sbjct: 48 ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 107 Query: 71 VTRRVLLPDHVIPLSVLHR 89 VT+ + ++ + + Sbjct: 108 VTQTRIEKGDILLTTDVGE 126 >gi|227487790|ref|ZP_03918106.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227542431|ref|ZP_03972480.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227092292|gb|EEI27604.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227181629|gb|EEI62601.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 192 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 20/125 (16%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 +R + SL +L+ V S ++AGE L S V S I N Sbjct: 15 LRRIAAVSLVILAATLSLTRKDPTVVTLSRTVSAGETLAPSDFSRTSVPQSLIPDNAVTD 74 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVL-----------------HRPY---VISRGAKVRIIL 103 G V L ++ + P ++ G V I+ Sbjct: 75 DTAAHGNVAVTTLSRGQILTSTSYTGEGITPAGLTSVPLRLADPATSELLKHGDSVTIVA 134 Query: 104 TQGNM 108 G++ Sbjct: 135 GDGSI 139 >gi|330719628|gb|EGG98196.1| hypothetical protein imdm_386 [gamma proteobacterium IMCC2047] Length = 44 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 28/44 (63%) Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 M++ + GIA+++ +G I VKN + +++ VV++ V VV+ Sbjct: 1 MSVKSPGIAINNGRVGQQIQVKNKSSKRVITARVVNSRLVEVVM 44 >gi|219682833|ref|YP_002469216.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis AD011] gi|219620483|gb|ACL28640.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis AD011] Length = 192 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +L+ A+ AVV + ++AG V+ ++ +++ + + + D VGL Sbjct: 17 ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 76 Query: 71 VTRRVLLPDHVIPLSVLHR 89 VT+ + ++ + + Sbjct: 77 VTQTRIEKGDILLTTDVGE 95 >gi|322378357|ref|ZP_08052813.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter suis HS1] gi|321149214|gb|EFX43658.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter suis HS1] Length = 221 Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 ++ + L+ S + ++ + R + P ++ + + Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHF-NTLPIDASYINNSSARSFIAPHTILSIDRVGPKI 162 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147 +I + L +G + + T+ AL + + VI N+ + +V + G V Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220 >gi|322380927|ref|ZP_08054998.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter suis HS5] gi|321146650|gb|EFX41479.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter suis HS5] Length = 221 Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 ++ + L+ S + ++ + R + P ++ + + Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHF-NTLPIDASYINNSSARSFIAPHTILSIDRVGPKI 162 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147 +I + L +G + + T+ AL + + VI N+ + +V + G V Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220 >gi|116671247|ref|YP_832180.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24] gi|116611356|gb|ABK04080.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24] Length = 214 Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 8/120 (6%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VG 69 S+ + A I GE L + ++V ++ G+Y + + G Sbjct: 32 SVAGVVSLVGAADQTTEVYAAKGPIAVGERLTAENVNRVKVRLGDVEGHYVTAEAGLPDG 91 Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG------IALSDASIG 123 +V + + PD ++P L +P ++R V I + + AG +AL DA G Sbjct: 92 MVAVQRIGPDQLVPRDSLGKPDALNR-KPVAITIDEALPEQVAAGSRVDAWVALPDARNG 150 >gi|309811232|ref|ZP_07705024.1| SAF domain protein [Dermacoccus sp. Ellin185] gi|308434844|gb|EFP58684.1| SAF domain protein [Dermacoccus sp. Ellin185] Length = 760 Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I AGE L + + S RG + ++ +VG RR + Sbjct: 404 LAKSLVATRDIAAGEKLTRADVTIK----SPGRGLQPNRLEALVGRTMRRPIESGDFFYA 459 Query: 85 SVLHRPYV 92 + L Sbjct: 460 TDLTDAVA 467 >gi|156744073|ref|YP_001434202.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235401|gb|ABU60184.1| SAF domain protein [Roseiflexus castenholzii DSM 13941] Length = 267 Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 19/71 (26%), Gaps = 4/71 (5%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + + G + + + + N + + R + S+ Sbjct: 65 VAARPLAPGNTIGPDDILLKDYPVNLVPVNALTDTTQIENRILARTVGQGDPFQKSMF-- 122 Query: 90 PYVISRGAKVR 100 V RG + Sbjct: 123 --VGERGESIS 131 >gi|225872753|ref|YP_002754210.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum ATCC 51196] gi|225791215|gb|ACO31305.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum ATCC 51196] Length = 271 Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 21/130 (16%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + I GEV+ + +K + + + KDV+G + I + L P Sbjct: 43 AARPIAVGEVIQAADVKTILWPANLPLQGGMATTKDVIGRAAIFPVTVGQPILSTDLAAP 102 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSD------ASI---GDVIAV----KNIDTGVMV 137 G+ + I N IAL G + V +N + + Sbjct: 103 -----GSSLGITTRIPN---GMRAIALHTDDVIAVGGFIFPGSHVDVLVTYRNPGSPQPI 154 Query: 138 SGSVVDTGTV 147 + +V+ V Sbjct: 155 TATVLQNALV 164 >gi|300743849|ref|ZP_07072869.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia dentocariosa M567] gi|300380210|gb|EFJ76773.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia dentocariosa M567] Length = 747 Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 4/72 (5%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I GEV+ E+ + S RG + + ++G +R + Sbjct: 401 LAKSLVATRSIAKGEVITEADVTVK----SPGRGLQPNYLPQLLGRTIQRDVEEGSFFFE 456 Query: 85 SVLHRPYVISRG 96 L V R Sbjct: 457 GDLKDDLVTRRN 468 >gi|283797119|ref|ZP_06346272.1| Flp pilus assembly protein CpaB [Clostridium sp. M62/1] gi|291075536|gb|EFE12900.1| Flp pilus assembly protein CpaB [Clostridium sp. M62/1] Length = 280 Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V I GE + +K ++V N+ + Sbjct: 14 CIVLSLIICFAVTPLFNKAISDKTEIVRVVKEIRTGEEITADMVKTVEVGAYNLPEDVVR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 S + VVG ++P I S + + + +++S A + Sbjct: 74 STETVVGKFASADMVPGDYIIASKIAEEPAAENAYLYSLTGEKQAISVSVKSFA--NGLS 131 Query: 123 GDVIAVKNIDTGVMVS 138 G + +G +VS Sbjct: 132 GK------LQSGDIVS 141 >gi|332710335|ref|ZP_08430283.1| N-acetylneuraminate synthase [Lyngbya majuscula 3L] gi|332350884|gb|EGJ30476.1| N-acetylneuraminate synthase [Lyngbya majuscula 3L] Length = 755 Score = 41.4 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 4/74 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + + G+V+ ++ S +G + +++G + RR Sbjct: 400 ETLAKSLVINCNLEPGQVITSEMIEVK----SPGKGLQPNRKTELIGQLARRRFKAGDFF 455 Query: 83 PLSVLHRPYVISRG 96 S L R + +R Sbjct: 456 FPSDLEREQIQARN 469 >gi|117928960|ref|YP_873511.1| hypothetical protein Acel_1753 [Acidothermus cellulolyticus 11B] gi|117649423|gb|ABK53525.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B] Length = 236 Score = 41.4 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 4/97 (4%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65 L+ S+ + A + + G L+ S L ++V + Y Sbjct: 38 LLIVVSIAAGAKILDSARHYDTVWAAARDLAPGTTLSHSDLTPVKVRFRDHGARYVAGGS 97 Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102 D+ G R + +IP S + G VR++ Sbjct: 98 DLAGWTVTRPVPAGELIPRSAVSE----RAGTPVRLV 130 >gi|172039394|ref|YP_001805895.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. ATCC 51142] gi|171700848|gb|ACB53829.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. ATCC 51142] Length = 749 Score = 41.0 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G+V+ E+ ++ S +G + K+++G +R L S L + Sbjct: 412 LEPGQVITEAMIEVK----SPGKGLQPNRKKELIGKTAKRSLKAGDFFFSSDLEEAQI 465 >gi|283852072|ref|ZP_06369346.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B] gi|283572462|gb|EFC20448.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B] Length = 300 Score = 41.0 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 20/57 (35%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +V + + G L+ + ++ +VVG VT R + D I Sbjct: 48 VLVAARPLAKGARLDTTMVRLKPYDPEAAPLGAMRDASEVVGRVTAREISQDDPITP 104 >gi|253576735|ref|ZP_04854062.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843945|gb|EES71966.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 318 Score = 41.0 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 29/64 (45%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP+ I AG + S LK +++ +++ + S + + G + L + ++++ Sbjct: 68 VPTRDIPAGNRIAASDLKRVELPANSVPADLFKSQEAIAGKYAKIALRSMTPLTEALVYE 127 Query: 90 PYVI 93 + Sbjct: 128 EAPV 131 >gi|183601919|ref|ZP_02963288.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis subsp. lactis HN019] gi|241190409|ref|YP_002967803.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195815|ref|YP_002969370.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218804|gb|EDT89446.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis subsp. lactis HN019] gi|240248801|gb|ACS45741.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250369|gb|ACS47308.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793396|gb|ADG32931.1| hypothetical protein BalV_0343 [Bifidobacterium animalis subsp. lactis V9] Length = 185 Score = 41.0 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +L+ A+ AVV + ++AG V+ ++ +++ + + + D VGL Sbjct: 10 ALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGCPDDAVGL 69 Query: 71 VTRRVLLPDHVIPLSVLHR 89 VT+ + ++ + + Sbjct: 70 VTQTRIEKGDILLTTDVGE 88 >gi|226307879|ref|YP_002767839.1| hypothetical protein RER_43920 [Rhodococcus erythropolis PR4] gi|226186996|dbj|BAH35100.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 248 Score = 41.0 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 24/65 (36%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV S + G+V+ +S ++ ++ + + VVG + + + Sbjct: 71 VVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGETVTDVRV 130 Query: 88 HRPYV 92 P + Sbjct: 131 LSPRL 135 >gi|220930147|ref|YP_002507056.1| SAF domain protein [Clostridium cellulolyticum H10] gi|220000475|gb|ACL77076.1| SAF domain protein [Clostridium cellulolyticum H10] Length = 294 Score = 41.0 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V S I AG+ + + ++ ++V + N+ Sbjct: 14 CILLSLVICFAVTPLFNSSISQRTKIVRVSRDIKAGDKITGNMVQIVEVGSYNLPSGVIK 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAGI 115 + D +G + I + L G K + +T G+ +G Sbjct: 74 NKDDAIGKYASADMKTGDYIFNTKLSAAPAAENSYLYSLNGEKQAMSVTVGSFASGLSGK 133 Query: 116 ALSDASIGDVIAV 128 +S GD+++V Sbjct: 134 LMS----GDIVSV 142 >gi|149189201|ref|ZP_01867488.1| sialic acid synthase [Vibrio shilonii AK1] gi|148836955|gb|EDL53905.1| sialic acid synthase [Vibrio shilonii AK1] Length = 751 Score = 41.0 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +VV V I G+V+ E L S +G + + ++V V R + + + Sbjct: 400 ETLAKSVVADVNIKKGDVITEEMLAIK----SPGKGLAPYKLSELVNRVAVRDIPKNDFL 455 Query: 83 PLSVLHRPYV 92 S + V Sbjct: 456 YQSDIDGNVV 465 >gi|303325648|ref|ZP_07356091.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3] gi|302863564|gb|EFL86495.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3] Length = 353 Score = 41.0 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V + + AG+ L + L + + NY +V+GL RR L D V+ + Sbjct: 294 RSLVTTRAVPAGQALTPADLTWKRPAHGISPRNY----DEVLGLRARRDLPEDTVLTWAD 349 Query: 87 LHRP 90 L R Sbjct: 350 LDRA 353 >gi|167036494|ref|YP_001664072.1| SAF domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320114922|ref|YP_004185081.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855328|gb|ABY93736.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928013|gb|ADV78698.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 180 Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 VV I AG V+++ +K V S +R NYA S+ DV+G V + + IP+ Sbjct: 29 TEKVVVVEKDIPAGTVISQDAVKVTDVPASVVRPNYAKSLADVIGKVVKEGRVQGDFIPV 88 Query: 85 SVL--HRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 +L ++ G V + + + T L Sbjct: 89 EILTSQDEKLLEAG-HVIMTIQIDKVEAKT----LQSG 121 >gi|167772246|ref|ZP_02444299.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM 17241] gi|167665349|gb|EDS09479.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM 17241] Length = 281 Score = 40.6 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + L + S V I AG+ + ES ++ ++V N+ + Sbjct: 14 CIMLSLLICFGLTPLFNQSLSQKAEIVRVVQPIRAGDEITESMVQTVEVGGYNLPEDVLR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121 + VG L I S L + +Q +++S A Sbjct: 74 QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSIKSFAEGLSGK 133 Query: 122 I--GDVIAV 128 + GD+++V Sbjct: 134 LQSGDIVSV 142 >gi|254421375|ref|ZP_05035093.1| NeuB family [Synechococcus sp. PCC 7335] gi|196188864|gb|EDX83828.1| NeuB family [Synechococcus sp. PCC 7335] Length = 749 Score = 40.6 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + G+V+ + S +G + +++GL +R + Sbjct: 400 ETLAKSLVTKCDLAPGDVITAEMIDVR----SPGQGLQPNRKAELIGLRIKRSIQAGDFF 455 Query: 83 PLSVLHRPYVISR 95 S LH V +R Sbjct: 456 FPSDLHSEQVQAR 468 >gi|170725114|ref|YP_001759140.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908] gi|169810461|gb|ACA85045.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908] Length = 298 Score = 40.6 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82 + VV + + G++++E+ + ++ + + H +VG + + P + Sbjct: 49 MAQVVVATQELRKGDIISEANMSVRKIQADTLPLDAIHPKDFNQIVGQMLLEPMSPGRPL 108 >gi|226325180|ref|ZP_03800698.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758] gi|225206528|gb|EEG88882.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758] Length = 497 Score = 40.6 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKD----VVGLVTRRVL 76 S V + I+AG+ ++ S L + V NS + I D VG V + + Sbjct: 310 SGTTEVVAATKTIHAGDEISASDLAFVSVPNSTVADGAITKKDIDDSSKTPVGRVATQYI 369 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASIGDVIAV 128 + + + + G M T + +G ++ V Sbjct: 370 AKGSQLTNASTA-----GKDNPESLAAAIGDGMEAVTISVDAQSG-MGGMLRV 416 >gi|126660335|ref|ZP_01731448.1| Sialic acid synthase [Cyanothece sp. CCY0110] gi|126618366|gb|EAZ89122.1| Sialic acid synthase [Cyanothece sp. CCY0110] Length = 752 Score = 40.6 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 + G+++ E+ ++ S +G + K+++G +R S L + + Sbjct: 412 LEPGQIITEAMIEIK----SPGKGLQPNRKKELIGKTAKRPFKVGDFFFPSDLEEAQITA 467 Query: 95 RG 96 + Sbjct: 468 KN 469 >gi|163840497|ref|YP_001624902.1| hypothetical protein RSal33209_1753 [Renibacterium salmoninarum ATCC 33209] gi|162953973|gb|ABY23488.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC 33209] Length = 227 Score = 40.6 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + A+ S + AG ++ S + ++V + I +G L ++ Sbjct: 51 VETALAASKDLPAGSTISASDMVLLKVPLAAIPQAALARPSQAIGQQLAGALRKGQILTD 110 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT-GVMVSGSV 141 + L +++ G + + +S AG A + G ++ V N D+ G +G+V Sbjct: 111 TSLLGQSLLT-GTPAGSVAV--PLRLSDAGTA-KLVAPGQLVTVVLTNEDSTGRAENGTV 166 Query: 142 VD 143 + Sbjct: 167 LA 168 >gi|134298817|ref|YP_001112313.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1] gi|134051517|gb|ABO49488.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1] Length = 232 Score = 40.6 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 VP+ VI AG V+ + + + ++ G V L P I L Sbjct: 48 VPAHVIYAGHVITPGDITIRKFLKAAQEPTSIQDTTEITGRVAASDLYPMEQIRADKLVP 107 Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIG--DVIAVKN----IDTGVMVSGSVVD 143 P I + + + ++ G + + V+ ++N + +VSG V Sbjct: 108 PENILNTGEAYVSIKADSLEQILGGQIQPNMQVDVYHVVDLENAPVLLAKSAIVSGIVGA 167 Query: 144 TGTV 147 +G+V Sbjct: 168 SGSV 171 >gi|326388865|ref|ZP_08210447.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370] gi|326206465|gb|EGD57300.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370] Length = 347 Score = 40.6 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 10/102 (9%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 +V + G ++ + ++ Y ++ ++G V R + I Sbjct: 46 KVLVAQRALPVGTIITADAVSYQAWPKDLVQDAYFLQDKTDMQKLLGTVVRNPITAGQPI 105 Query: 83 PLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASIG 123 L P G + + G M T ++ G Sbjct: 106 TTGSLVAP-----GDRGFLAAALGPGMRAVTIPVSTRTGVAG 142 >gi|324990782|gb|EGC22717.1| pyruvate phosphate dikinase [Streptococcus sanguinis SK353] Length = 873 Score = 40.6 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D+ G+V + ++ + V++RG + G +TIS A+S S Sbjct: 428 TSPEDIEGMVVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEESKAVSCGS 484 Query: 122 I----GDVIAVKNIDTGVMVSGSV 141 + GDVI+V + +G + SG + Sbjct: 485 LVLTEGDVISV-DGSSGRIYSGEI 507 >gi|117619605|ref|YP_855990.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561012|gb|ABK37960.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 296 Score = 40.2 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNY---AHSIKDVVG 69 + + ++ + +V + + AG ++ L + + N+ G + K + G Sbjct: 38 APEPAASARLAQVLVAAHRVQAGAFIHPEDLVWQTLPAAEEMNLPGLFLFGFTDTKALKG 97 Query: 70 LVTRRVLLPDHVIPLSVLHRP 90 + R L ++ L RP Sbjct: 98 SLVTRTLEAGQIVSADDLVRP 118 >gi|218886984|ref|YP_002436305.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757938|gb|ACL08837.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 354 Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V + I AG V+ L + G I V+G R + D V+ S Sbjct: 297 RSLVAARPIAAGAVITRDDLTWKR----PAHGVSPREIDAVLGKRARADIAEDTVLQWSH 352 Query: 87 LH 88 L Sbjct: 353 LE 354 >gi|220905152|ref|YP_002480464.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869451|gb|ACL49786.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 356 Score = 40.2 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 SL L + ++V + I AG + + L + + NY +V+G+ Sbjct: 278 SLRALPEEEPARQHARRSLVTARAIPAGTPVTAADLTWKRPAHGISPRNY----DEVLGM 333 Query: 71 VTRRVLLPDHVIPLSVLH 88 R L D V+ S L Sbjct: 334 RARHDLAEDTVLHWSDLE 351 >gi|319653978|ref|ZP_08008071.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2] gi|317394300|gb|EFV75045.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2] Length = 221 Score = 40.2 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 ++ LD + V+ VI V+ + Q+ N + ++ DVV Sbjct: 20 MGAVAANELDLFKSLTTTQVVMAKDVIEKDTVITNENVWIFQMPNELVTDEMYRNVNDVV 79 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYV 92 G +V+LP + L + + Sbjct: 80 GKTATQVILPSQYVSAKALDQSLL 103 >gi|302335340|ref|YP_003800547.1| SAF domain protein [Olsenella uli DSM 7084] gi|301319180|gb|ADK67667.1| SAF domain protein [Olsenella uli DSM 7084] Length = 229 Score = 40.2 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 25/72 (34%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + + VV + G+V++++ + E + S+ DVVG + Sbjct: 40 IARYGGEVVRLVVSRGPLEPGDVVDQADVSERDWVTDLAPSDALTSLDDVVGREVTVPVA 99 Query: 78 PDHVIPLSVLHR 89 + + Sbjct: 100 ANAPVTALAFRD 111 >gi|295396211|ref|ZP_06806393.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294970999|gb|EFG46892.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 173 Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 18/61 (29%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I+ G V+ + I N VVG + L + + Sbjct: 11 RIVVAHTRIDPGTVITARLVTTRVFPPQLIPENAVTDPAQVVGTTSASSLDAGTPVTTTA 70 Query: 87 L 87 L Sbjct: 71 L 71 >gi|148657460|ref|YP_001277665.1| SAF domain-containing protein [Roseiflexus sp. RS-1] gi|148569570|gb|ABQ91715.1| SAF domain [Roseiflexus sp. RS-1] Length = 260 Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 18/71 (25%), Gaps = 4/71 (5%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + + G + + + N + V R + S+ Sbjct: 58 VAARSLTPGNAIGPDDILLKDFPVDLVPVNALTETTQIESRVLARAVGQGDPFQRSMF-- 115 Query: 90 PYVISRGAKVR 100 V RG V Sbjct: 116 --VGERGESVS 124 >gi|153956473|ref|YP_001397238.1| hypothetical protein CKL_3890 [Clostridium kluyveri DSM 555] gi|219856777|ref|YP_002473899.1| hypothetical protein CKR_3434 [Clostridium kluyveri NBRC 12016] gi|146349331|gb|EDK35867.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570501|dbj|BAH08485.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 276 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 9/142 (6%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V + I GE + + ++ ++V N+ + Sbjct: 14 CIVLSLLICFAVTPLFNQSISQKTEIVRVTKPIKIGEAITKDMVQTVEVGGYNLPEDVVR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 V+G L+P I S + + + +++S A Sbjct: 74 HTDTVIGKFASADLVPGDYIIASKIADTPAAENAYLYNLTGKKQAISVSVKSFA--AGLS 131 Query: 123 GDVIAVKNIDTGVMVSGSVVDT 144 G +I +G +VS V Sbjct: 132 GKLI------SGDIVS-IVAPD 146 >gi|220910291|ref|YP_002485602.1| N-acetylneuraminate synthase [Cyanothece sp. PCC 7425] gi|219866902|gb|ACL47241.1| N-acetylneuraminate synthase [Cyanothece sp. PCC 7425] Length = 748 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 12/84 (14%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + + G+V+ + S RG + +++GL +R Sbjct: 402 LAKSLVINCDLQPGQVITAEMIDVK----SPGRGLQPNRKVELIGLKAKRPFKAGDFFFP 457 Query: 85 SVLH------RPYVISR--GAKVR 100 S L RPY R G VR Sbjct: 458 SDLEYEKVQARPYKFKRPWGLPVR 481 >gi|332982946|ref|YP_004464387.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON] gi|332700624|gb|AEE97565.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON] Length = 332 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VV + IN + + + S + G+ V+G +T +P +I Sbjct: 27 EGTKQVVVVTKEINDTMEITSDMITVKALPVSAVPGDVLTDPNAVIGKMTTVGRIPGDLI 86 Query: 83 PLSVLHRP 90 P S+L +P Sbjct: 87 PKSILAKP 94 >gi|256826164|ref|YP_003150124.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547] gi|256689557|gb|ACV07359.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547] Length = 218 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 V +V I G L L+ +++ + A S++++ G L P Sbjct: 50 APPVTTEVLVADAEIAPGTTLTAEHLRTIELPEGAAAWD-AGSVEELTGRTVTIPLAPGD 108 Query: 81 VIPLSVL 87 + + Sbjct: 109 PVTPRSV 115 >gi|254478346|ref|ZP_05091725.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] gi|214035704|gb|EEB76399.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] Length = 181 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV I AG V++E +K + V S +R YA S+ DVVG V + + IP Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKIIDVPASAVRPEYARSLTDVVGKVVKEGRVRGDFIP 87 >gi|51245388|ref|YP_065272.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54] gi|50876425|emb|CAG36265.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54] Length = 285 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 26/90 (28%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 V ++ G + ++ + + ++ VVG + L Sbjct: 40 GQATTDIAVAVKDMSRGSKIGSEDVQMATYLQETLPSGHFTDLEQVVGRIVLSPLTTTEP 99 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 I S L + G I T+ M I Sbjct: 100 ILNSDLAPQDLTKGGLAAVITPTKRAMAIK 129 >gi|225017400|ref|ZP_03706592.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum DSM 5476] gi|224949810|gb|EEG31019.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum DSM 5476] Length = 290 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 12/132 (9%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 C+ + + L + AV V + VI G + ++ S + + A Sbjct: 16 CILLAVLVCFGITPLFNAGLKAQTEAVRVKAEVIPRGTYITADMVEVYTRGASGMPDSIA 75 Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAG 114 S+ +VVG T L + + L + G+KV I +T +G Sbjct: 76 TSLDEVVGRYTDVELRKNTDVNTGWLSSEPLTQYEYLTKLDGSKVAISVTIPTFAKGGSG 135 Query: 115 IALSDASIGDVI 126 GD+I Sbjct: 136 KV----EAGDII 143 >gi|325067747|ref|ZP_08126420.1| hypothetical protein AoriK_07996 [Actinomyces oris K20] Length = 250 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 9/101 (8%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +V S I+AG VL E + + + + S VG L V+ S+ Sbjct: 16 VLVASRSISAGAVLTEQDVSISNLPAGALPQSPLTSAGQAVGSRAAISLEKGTVLTASMT 75 Query: 88 ---------HRPYVISRGAKVRIILTQGNMTISTAGIALSD 119 ++ V L + + G A D Sbjct: 76 SGYLAQQLGDDERLVQVPVDVGAELARPGARVDIIGQASED 116 >gi|296122068|ref|YP_003629846.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776] gi|296014408|gb|ADG67647.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776] Length = 334 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 23 SVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 VI VP + I G ++ E + V NS ++ + + + +VG V R + Sbjct: 37 PVIATRNVPMAISDIEPGTLITEGHIGLGPVQNSQLKPDMLLANRVIVGRVARTKIRAAE 96 Query: 81 VIPLSVLHRP 90 I L++P Sbjct: 97 PIRAGQLYQP 106 >gi|209527045|ref|ZP_03275561.1| N-acylneuraminate-9-phosphate synthase [Arthrospira maxima CS-328] gi|209492556|gb|EDZ92895.1| N-acylneuraminate-9-phosphate synthase [Arthrospira maxima CS-328] Length = 749 Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I G+++ ++ S +G + I D++G V R ++P Sbjct: 402 LAKSLVTNQSIKKGQIIKREMIEVK----SPGQGLQPNRIHDLLGKVASRDMMPGDFFFE 457 Query: 85 SVLHRPYVISRGA 97 S + + I + Sbjct: 458 SDIVQ-KAIKKSE 469 >gi|320161465|ref|YP_004174689.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1] gi|319995318|dbj|BAJ64089.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1] Length = 376 Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 3/100 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + V+ I+ G NE+ + + ++ G + I++V+G + + I Sbjct: 55 MTSIVISVQPISRGLEFNETNVTTIPYPKKDLVEGAFITDIQEVLGKRAKFDIEARTPIT 114 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 +++L P ++ + + G + I+ LS + G Sbjct: 115 MTMLVDPT--TKNSPAAFQIPPGQVAITIPVSKLSSVAYG 152 >gi|257791505|ref|YP_003182111.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] gi|257475402|gb|ACV55722.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] Length = 243 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V+ + I+ G ++ LK + + S + +D+VG + + + + +L Sbjct: 77 VITTTAISQGTTISPDMLKVVDIPASFLNSEAIADTQDLVGKIALYNIAANSQVTSGMLS 136 Query: 89 R 89 Sbjct: 137 A 137 >gi|118443277|ref|YP_877857.1| sialic acid synthase [Clostridium novyi NT] gi|118133733|gb|ABK60777.1| Sialic acid synthase [Clostridium novyi NT] Length = 352 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 V ++V S I GE++ E L + + ++ Y KD++G + + D Sbjct: 289 MKVARKSIVASKYIRKGEIITEEHLDYKR-PGTGLKPKYY---KDIIGKKASKDIEADMQ 344 Query: 82 IPLSVLHR 89 I ++ R Sbjct: 345 ITFDLVER 352 >gi|242003723|ref|XP_002422836.1| Sialic acid synthase, putative [Pediculus humanus corporis] gi|212505706|gb|EEB10098.1| Sialic acid synthase, putative [Pediculus humanus corporis] Length = 376 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G VV + + G+V+ + I GNY H+ ++G + + D I Sbjct: 316 LGKTVVAAKPLKKGDVITWDNVSLKVAEPKGIPGNYLHN---IIGKTINKTVDEDESILE 372 Query: 85 SVL 87 + Sbjct: 373 NFF 375 >gi|167769285|ref|ZP_02441338.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM 17241] gi|167668253|gb|EDS12383.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM 17241] Length = 281 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + L + S V I AG+ + ES ++ ++V N+ + Sbjct: 14 CILLSLLICFGLTPLFNQSVSQKAEIVRVVQPIRAGDEITESMVQIVEVGGYNLPEDVLR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121 + VG L I S L + +Q +++S A Sbjct: 74 QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSIKSFAEGLSGK 133 Query: 122 I--GDVIAV 128 + GD+++V Sbjct: 134 LQSGDIVSV 142 >gi|154486709|ref|ZP_02028116.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis L2-32] gi|154084572|gb|EDN83617.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis L2-32] Length = 206 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 +++ A VV + G + ++ + + N H++ D VGL Sbjct: 6 TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREAVELREAPSDGSLSNAFHTLDDAVGL 65 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108 + + + V+ + V+ +G VR+ + Sbjct: 66 IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVADGL 106 >gi|154509492|ref|ZP_02045134.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC 17982] gi|153799126|gb|EDN81546.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC 17982] Length = 194 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 2/83 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 L+ S+ S S + I GE L ++E V S Y + + Sbjct: 11 LIIASVIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVRE--VVLSVDSDVYVPTSEA 68 Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89 +G V R + P ++ + L + Sbjct: 69 PMGSVATRQITPGQIVMRTDLSQ 91 >gi|311113094|ref|YP_003984316.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC 17931] gi|310944588|gb|ADP40882.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC 17931] Length = 747 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I GEV+ E+ + S RG + + ++G +R + Sbjct: 401 LAKSLVATRGIAKGEVITEADVTVK----SPGRGLQPNYLPQLLGRTIQRDVEEGSFFFE 456 Query: 85 SVLHRPYVISRGA 97 L +++R Sbjct: 457 GDLKD-DLVTRRD 468 >gi|167763885|ref|ZP_02436012.1| hypothetical protein BACSTE_02266 [Bacteroides stercoris ATCC 43183] gi|167698001|gb|EDS14580.1| hypothetical protein BACSTE_02266 [Bacteroides stercoris ATCC 43183] Length = 347 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 LY+ S + ++ + ++ G+++ E + S G VVG Sbjct: 274 LYIDPAVSAAKVKLERSIATNKALHPGDIITEEDIHL----LSPGDGFKWAERDKVVGRR 329 Query: 72 TRRVLLPDHVIPLSVLHR 89 R+ + + +I S++ Sbjct: 330 VRKEIPRNEIIYPSLIEE 347 >gi|323497096|ref|ZP_08102119.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326] gi|323317940|gb|EGA70928.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326] Length = 343 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + +VV + ++ G+VL + + + Y + V+G V + + D VI L Sbjct: 284 MRRSVVSARQLSKGDVLTLTDIVLKRPGTGVPADRY----ESVIGKVVTQDIAADQVIDL 339 Query: 85 SVLH 88 S L Sbjct: 340 SALK 343 >gi|332970970|gb|EGK09944.1| hypothetical protein HMPREF9374_2747 [Desmospora sp. 8437] Length = 245 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 28/83 (33%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V I + E+L + ++ + + + ++ G V+ L + Sbjct: 39 APTTVYVAKQEIASREILRPEFFEAKEIPSKYVTSSMVTDPAEIDGQVSVVPLGKGDQLT 98 Query: 84 LSVLHRPYVISRGAKVRIILTQG 106 S+L ++ G ++L Sbjct: 99 KSMLKPARQLNDGESRMVLLRTS 121 >gi|332305652|ref|YP_004433503.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172981|gb|AEE22235.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 753 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 5/74 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +G +V+ V I GE + L + Y ++G+ R + + Sbjct: 400 ESLGKSVIADVSIAKGEKITRKMLAVKS-PGKGLAPYYL---DKLIGMQANRDIDKNDFF 455 Query: 83 PLSVLHR-PYVISR 95 S P V +R Sbjct: 456 YHSDYSNLPKVAAR 469 >gi|167039378|ref|YP_001662363.1| SAF domain-containing protein [Thermoanaerobacter sp. X514] gi|300914019|ref|ZP_07131336.1| SAF domain protein [Thermoanaerobacter sp. X561] gi|307725296|ref|YP_003905047.1| SAF domain-containing protein [Thermoanaerobacter sp. X513] gi|166853618|gb|ABY92027.1| SAF domain [Thermoanaerobacter sp. X514] gi|300890704|gb|EFK85849.1| SAF domain protein [Thermoanaerobacter sp. X561] gi|307582357|gb|ADN55756.1| SAF domain protein [Thermoanaerobacter sp. X513] Length = 181 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V+ I AG V++E +K + + S +R +YA S+ DVVG V + + IP Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDIPASAVRPDYARSLTDVVGKVVKEGRVRGDFIP 87 >gi|284048527|ref|YP_003398866.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM 20731] gi|283952748|gb|ADB47551.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM 20731] Length = 339 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 22/64 (34%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A+ V + I VL E LK ++V + + K +G T L + Sbjct: 64 AAGNVTVVEAARDIAPQTVLTEEMLKTVEVPANLVPAGALTDKKQALGKKTGIDLFAGDI 123 Query: 82 IPLS 85 + Sbjct: 124 LTER 127 >gi|127511580|ref|YP_001092777.1| SAF domain-containing protein [Shewanella loihica PV-4] gi|126636875|gb|ABO22518.1| SAF domain protein [Shewanella loihica PV-4] Length = 298 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 8/66 (12%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDHV 81 + +V + + G++++++ + Q+ + + H + +V G + + + P Sbjct: 48 AMADVIVATQPLKKGDIISQANMSVRQIRADTLPLDAIHPSRFGEVAGQMLLQPMAPGRP 107 Query: 82 IPLSVL 87 + + L Sbjct: 108 LIETYL 113 >gi|154499687|ref|ZP_02037725.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC 29799] gi|150271285|gb|EDM98542.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC 29799] Length = 296 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 13/105 (12%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + + GE + + ++V N+ N AHS+ DV GL L I S + Sbjct: 48 TQPVLKGETITSDNAEVVEVGGYNLPSNVAHSMDDVEGLYVTADLAEGDYILTSKVSTVP 107 Query: 92 V---ISRGAKVRIILTQGNMTISTAGIALSDA-----SIGDVIAV 128 V ++ + G + IS L+ GD+I + Sbjct: 108 VSSDVALND-----IPSGKVAISLTVKTLASGLSDKLQPGDIIRI 147 >gi|261856885|ref|YP_003264168.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2] gi|261837354|gb|ACX97121.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2] Length = 258 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 2/73 (2%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVL 76 + + VVP + G+VL+ L + + + + + +G + L Sbjct: 39 TAAPQKMRTVVVPVHNLKVGDVLSAKDLATRDIPVAYVPADALTPDDYESHLGQMLTTPL 98 Query: 77 LPDHVIPLSVLHR 89 I + Sbjct: 99 AQGAPISAMAMEP 111 >gi|293189446|ref|ZP_06608166.1| SAF domain protein [Actinomyces odontolyticus F0309] gi|292821536|gb|EFF80475.1| SAF domain protein [Actinomyces odontolyticus F0309] Length = 194 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 2/83 (2%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 L+ SL S S + I GE L ++E V S Y + + Sbjct: 11 LIIASLIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVRE--VVLSVDSDVYVPTSEA 68 Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89 +G V R + P ++ + L + Sbjct: 69 PMGSVVTRQITPGQIVMRTDLSQ 91 >gi|78486069|ref|YP_391994.1| Flp pilus assembly CpaB [Thiomicrospira crunogena XCL-2] gi|78364355|gb|ABB42320.1| Flp (type IV) pilus assembly protein CpaB homolog [Thiomicrospira crunogena XCL-2] Length = 296 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV S I GE + +K + V + + ++ VG V + + I L Sbjct: 57 VVASRDIYRGEKIEADDVKVLNVPMEGLVVKGVIINPQNAVGHVAHQKIYAGEWILAKKL 116 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG--------DVIAV-KNIDTGVMVS 138 SR V +L + I +G DVI+V ++ D+ MVS Sbjct: 117 KLESQ-SRFQSVEALLEKTRRAIRLPIEP-DTGLLGIISPGDHVDVISVFESADSKRMVS 174 Query: 139 GSVVDTGTV 147 +++ TV Sbjct: 175 RTILQNITV 183 >gi|326773108|ref|ZP_08232392.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505] gi|326637740|gb|EGE38642.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505] Length = 261 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 3/92 (3%) Query: 14 VLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 VL S+ +V S I+AG +L + + + + + S + VG Sbjct: 10 VLVALSVLRPGPQRGQQVLVASHAISAGAILTDQDVSISTLPTGALPQSPLTSTEQAVGN 69 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102 L V+ S+ G R++ Sbjct: 70 RAAISLEKGTVLTASMTSGSLAQQLGDDERLV 101 >gi|269957599|ref|YP_003327388.1| SAF domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269306280|gb|ACZ31830.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 227 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 21/68 (30%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + VVP+ + G L L + V + D VG V L Sbjct: 51 APPPMRSVVVPTHRLEPGVELRAGDLTVVSVPAALAPDGALTDTADAVGRVPAVALEAGL 110 Query: 81 VIPLSVLH 88 + S++ Sbjct: 111 PLSASLVA 118 >gi|300781680|ref|ZP_07091534.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300533387|gb|EFK54448.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length = 212 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 26/63 (41%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 + ++ GE L+ ++ ++ + + + DV G + V+ + L P Sbjct: 47 TREVSPGEPLSADDVELQRMPEAIVPDGAFDQVSDVEGQIVASTASAGEVVTPTRLLGPD 106 Query: 92 VIS 94 ++S Sbjct: 107 LVS 109 >gi|83589608|ref|YP_429617.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073] gi|83572522|gb|ABC19074.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073] Length = 337 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 ++V + I AGE++ +S L + + I N VVG RR + + Sbjct: 276 MPAARRSLVAARDIAAGEIITDSCLTAKR-PGTGIPPNLW---DVVVGRQARRDIAAGSI 331 Query: 82 IPLSVL 87 + ++ Sbjct: 332 LSWDMI 337 >gi|294506511|ref|YP_003570569.1| Sialic acid synthase [Salinibacter ruber M8] gi|294342839|emb|CBH23617.1| Sialic acid synthase [Salinibacter ruber M8] Length = 338 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + + VV I AG + E R+ ++ + G A+ + V+G ++R L P Sbjct: 275 YRQSMKRRVVAGAEIPAGTTITEQRITLLRAND----GIKANRLDVVLGRKSQRSLQPGE 330 Query: 81 VIPLSVLH 88 I L Sbjct: 331 AITEDHLK 338 >gi|320161550|ref|YP_004174774.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1] gi|320161814|ref|YP_004175039.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1] gi|319995403|dbj|BAJ64174.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1] gi|319995668|dbj|BAJ64439.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1] Length = 290 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 L ++ ++L VV + + G VL E L ++ S + + Sbjct: 9 LAIVVFAVALALNQPEPQVSVVVAAGDLPEGRVLTEGDLTAKELPKSLAPEGAVSDPQSL 68 Query: 68 VGLVTRRVLLPDHVIPLSVLH 88 VG R + L Sbjct: 69 VGQRLRVARSAGDPVLPVHLG 89 >gi|194335912|ref|YP_002017706.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme BU-1] gi|194308389|gb|ACF43089.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme BU-1] Length = 263 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 S+ + + VV I AG+ + +++ + S + + + I VVG + ++P Sbjct: 27 SVAQTSMSRVVVVEQPIEAGKAIKAHQIRSIDWPGSAVPRDASTRIASVVGRIALVSMMP 86 Query: 79 DHVIPLSVLHR 89 + L Sbjct: 87 GEPVLPGKLAP 97 >gi|320532996|ref|ZP_08033744.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 171 str. F0337] gi|320134787|gb|EFW26987.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 171 str. F0337] Length = 319 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 3/92 (3%) Query: 14 VLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 VL S+ +V S I+AG +L + + + ++ + S VG Sbjct: 68 VLVALSVLRPGPERGQQVLVASRAISAGALLTDQDVSTSTLPAGSLPQSPLTSTGQAVGS 127 Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102 L V+ S+ GA R++ Sbjct: 128 RAAISLEKGTVLTASMTSGGMAQELGADERLV 159 >gi|197106458|ref|YP_002131835.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1] gi|196479878|gb|ACG79406.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1] Length = 287 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 4/67 (5%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS----IKDVVGLVTRRVLLPDHVIP 83 +V + + G +L S ++ Y S + G V R L P + Sbjct: 52 VLVAAQALPPGTILKPSHVRWQAWPADAPTAGYLTSAASGPAQIAGAVVRGELQPGQPLT 111 Query: 84 LSVLHRP 90 + + +P Sbjct: 112 TTGVVQP 118 >gi|83589202|ref|YP_429211.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073] gi|83572116|gb|ABC18668.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073] Length = 229 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 23/67 (34%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +VP+ INA + L QV + A D+VG V L + Sbjct: 46 QAMTQVIVPAHNINAYTQIKPGDLTWRQVPVGAVEPGTARKPDDLVGKVALAELYQGEQV 105 Query: 83 PLSVLHR 89 L + Sbjct: 106 RLERVGE 112 >gi|328953762|ref|YP_004371096.1| Flp pilus assembly protein CpaB [Desulfobacca acetoxidans DSM 11109] gi|328454086|gb|AEB09915.1| Flp pilus assembly protein CpaB [Desulfobacca acetoxidans DSM 11109] Length = 272 Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 I G VL LK +Q+ ++ + A +K + G VTR++++ VI L Sbjct: 50 RNIAPGSVLIPELLKVVQLPKEHVAADAATDLKALEGRVTRQLIVAGEVIQEHELAP 106 >gi|51468905|emb|CAE47778.1| pilus assembling protein [Bdellovibrio bacteriovorus] Length = 314 Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 25/64 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I + + ++ ++ ++ I+ + +++G V + ++ + Sbjct: 56 RVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVKNN 115 Query: 87 LHRP 90 L P Sbjct: 116 LLTP 119 >gi|301612838|ref|XP_002935918.1| PREDICTED: sialic acid synthase-like [Xenopus (Silurana) tropicalis] Length = 359 Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G +VV +V I AG VL S L V + RG I D+ G +R + D + Sbjct: 291 LGKSVVANVKIPAGTVLTLSMLT---VKVAEPRGFPPEEIYDLEGKTVKREIEEDESVTE 347 Query: 85 SVLH 88 + Sbjct: 348 EAIE 351 >gi|27381103|ref|NP_772632.1| hypothetical protein blr5992 [Bradyrhizobium japonicum USDA 110] gi|27354269|dbj|BAC51257.1| blr5992 [Bradyrhizobium japonicum USDA 110] Length = 356 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V ++V + + AGE++ + + + +Y ++G R L PD + Sbjct: 301 PVARKSIVAARALRAGEIIGPADITAKRPGAGRPPIDYWS----LIGTAAPRALEPDDPV 356 >gi|329956541|ref|ZP_08297138.1| SAF domain protein [Bacteroides clarus YIT 12056] gi|328524438|gb|EGF51508.1| SAF domain protein [Bacteroides clarus YIT 12056] Length = 347 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 LY+ S S + ++ + ++ G+++ E + S G VVG Sbjct: 274 LYIDSAVSAAKVKLERSIATNKALHPGDIITEEDIHL----LSPGDGFKWAERDKVVGRR 329 Query: 72 TRRVLLPDHVIPLSVLHR 89 R+ + + +I S++ Sbjct: 330 VRKEIPRNEIIYSSLIEE 347 >gi|289450946|gb|ADC93863.1| N-acetyl neuramic acid synthetase NeuB [Leptospira interrogans serovar Canicola] Length = 344 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + I+ GE+ +ES + + + N+ V+G RR D +I Sbjct: 287 PIARKSIVATRNISKGEIFSESNITTKRPGDGLSPMNW----DMVIGKQARRDFQIDELI 342 >gi|78186672|ref|YP_374715.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273] gi|78166574|gb|ABB23672.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273] Length = 266 Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVV-PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 F + + + + V G VV + I+AG + E++LK +Q S + + Sbjct: 16 MAAFITARWMGVVQSRSEVSGPTVVIAARAIDAGTAIAENQLKAVQWPRSTVPEGASART 75 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHR 89 DV G + R ++ + L Sbjct: 76 DDVAGRIARVSMIAGEPVLPGKLAP 100 >gi|119513229|ref|ZP_01632274.1| sialic acid synthase [Nodularia spumigena CCY9414] gi|119462123|gb|EAW43115.1| sialic acid synthase [Nodularia spumigena CCY9414] Length = 750 Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + + AGE++ + ++ S +G + +++G T+R Sbjct: 400 ETLAKSLVINCDLAAGEMITAAMIEVK----SPGKGLQPNRKAELIGKRTKRNFKIGDFF 455 Query: 83 PLSVLHRPYVISRG 96 S L V +R Sbjct: 456 YPSDLEHEQVKARN 469 >gi|323529414|ref|YP_004231566.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001] gi|323386416|gb|ADX58506.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001] Length = 278 Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ G+ LN + ++ + +++ K + G V R L P Sbjct: 33 SSAVTPVAVATAEVSLGQPLNANMIRTVNWPTASVPPGAFKDPKALDGRVVRTSLEPGEP 92 Query: 82 IPLSVLHRP 90 + S L Sbjct: 93 VIESKLAPQ 101 >gi|257793106|ref|YP_003186504.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479798|gb|ACV60115.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 272 Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 9/124 (7%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + +V + + A V + + GEV+ + V S + + Sbjct: 27 LVTAFVTDRVASHKVPMATAYVAAHDLTVGEVIGPKDVTRTVVPVSTLPPGALT--ASPI 84 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL----TQGNMTISTAGIALSDASIGD 124 G + V+ L + V + +T+ST + L+D S+G Sbjct: 85 GKTVTAPVYQGQVLVGGDLGHMGGV---DGVMRLYGMQTRAYPLTLSTQSVPLTDISVGQ 141 Query: 125 VIAV 128 + V Sbjct: 142 AVDV 145 >gi|24214309|ref|NP_711790.1| N-acetylneuraminic (sialic) acid synthetase [Leptospira interrogans serovar Lai str. 56601] gi|45658022|ref|YP_002108.1| N-acetylneuraminate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195230|gb|AAN48808.1| N-acetylneuraminic (sialic) acid synthetase [Leptospira interrogans serovar Lai str. 56601] gi|45601263|gb|AAS70745.1| N-acetylneuraminate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 344 Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + I+ GE+ +ES + + + N+ V+G RR D +I Sbjct: 287 PIARKSIVATRNISKGEIFSESNITTKRPGDGLSPMNW----DMVIGKQARRDFQIDELI 342 >gi|42521753|ref|NP_967133.1| putative flp pilus assembly protein CpaB [Bdellovibrio bacteriovorus HD100] gi|39574283|emb|CAE77787.1| putative flp pilus assembly protein CpaB [Bdellovibrio bacteriovorus HD100] Length = 301 Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 25/64 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I + + ++ ++ ++ I+ + +++G V + ++ + Sbjct: 43 RVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVKNN 102 Query: 87 LHRP 90 L P Sbjct: 103 LLTP 106 >gi|292491518|ref|YP_003526957.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4] gi|291580113|gb|ADE14570.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4] Length = 265 Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 23/68 (33%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 + A VV ++ I G+ + LK + N+ H V G V + Sbjct: 34 PGPVEVVAPETAPVVVAALEIPFGQKIETMHLKVISWPADNMPEGIFHETSAVEGRVASQ 93 Query: 75 VLLPDHVI 82 + P I Sbjct: 94 KIYPGEPI 101 >gi|148231444|ref|NP_001084989.1| hypothetical protein LOC432051 [Xenopus laevis] gi|47682297|gb|AAH70693.1| MGC83164 protein [Xenopus laevis] Length = 359 Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G +VV V I AG VL + L V + RG I D+ G +R + D + Sbjct: 291 LGKSVVAKVKIPAGTVLTLNMLT---VKVAEPRGFPPEEIYDLEGKTVKREIPEDESVTE 347 Query: 85 SVLH 88 + Sbjct: 348 EAIE 351 >gi|229495106|ref|ZP_04388852.1| SAF domain protein [Rhodococcus erythropolis SK121] gi|229318037|gb|EEN83912.1| SAF domain protein [Rhodococcus erythropolis SK121] Length = 234 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 21/56 (37%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV S + G+V+ +S ++ ++ + + VVG + + Sbjct: 57 VVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGETVT 112 >gi|218248201|ref|YP_002373572.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8801] gi|257060475|ref|YP_003138363.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8802] gi|218168679|gb|ACK67416.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8801] gi|256590641|gb|ACV01528.1| N-acylneuraminate-9-phosphate synthase [Cyanothece sp. PCC 8802] Length = 749 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 26/70 (37%), Gaps = 4/70 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + +++ + ++ G+++ ++ S +G + +++G +R Sbjct: 400 ETLAKSLIINCNLSPGQMITAEMIEVK----SPGKGLQPNRKSELIGTRAKRAFKAGDFF 455 Query: 83 PLSVLHRPYV 92 S L + Sbjct: 456 FPSDLEEAQI 465 >gi|189016770|ref|YP_001711809.1| hypothetical protein CMS_pCSL0080 [Clavibacter michiganensis subsp. sepedonicus] gi|167728941|emb|CAQ03323.1| hypothetical protein pCSL0080 [Clavibacter michiganensis subsp. sepedonicus] Length = 231 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSV 86 V S I G++++++ L + ++ DV+G L ++ S Sbjct: 66 VFVSSRDIARGQIISQTDLGTLDISQGQNTQGIPVADAADVIGQTATVDLPAGSLVTSSS 125 Query: 87 LHRPYVISRGA 97 + + G Sbjct: 126 VAPALSVPDGK 136 >gi|255327311|ref|ZP_05368385.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC 25296] gi|283458602|ref|YP_003363235.1| sialic acid synthase [Rothia mucilaginosa DY-18] gi|255295591|gb|EET74934.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC 25296] gi|283134650|dbj|BAI65415.1| sialic acid synthase [Rothia mucilaginosa DY-18] Length = 747 Score = 38.3 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I GEV+ E+ + S RG + + ++G +R + Sbjct: 401 LAKSLVATRHIAKGEVVTEADVAVK----SPGRGLQPNYLPQLLGRTMQRDVEEGSFFFE 456 Query: 85 SVLHRPYVISRGA 97 L +++R Sbjct: 457 GDLKD-DLVTRRD 468 >gi|296284551|ref|ZP_06862549.1| Flp pilus assembly protein CpaB [Citromicrobium bathyomarinum JL354] Length = 353 Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 11/95 (11%) Query: 7 LLFFSLYVLSLDSLFASVIG-------HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 + S++ + A+ G +V + G ++ + + +R Sbjct: 21 FIARSMFAGASAPEVAAATGPVEPTGPRVLVAQRSLPVGTIITQDAISYQAWPQELVRDA 80 Query: 60 YA----HSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 Y + ++G V R + + L P Sbjct: 81 YFIDGEADVSKLLGTVVRYQITAGEPVTQGALVAP 115 >gi|228943410|ref|ZP_04105855.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976380|ref|ZP_04136845.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228783328|gb|EEM31442.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816270|gb|EEM62450.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 331 Score = 37.9 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V V I GE++ +++ N ++++ V L + V+ Sbjct: 17 VTKVDIKKGEIITANKVTMELNVVENALNKL--EAEELLPQVAVYNLSAGTPLTKEVIEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|76663414|emb|CAE47790.1| pilus assembling protein [Bdellovibrio bacteriovorus] Length = 302 Score = 37.9 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 25/64 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I + + ++ ++ ++ I+ + +++G V + +I + Sbjct: 43 RVVVAKEDIAEMQTVYDTMVETKELPADFIQPDAITVPDEIIGNVAAVPIRKGQMIVKNN 102 Query: 87 LHRP 90 L P Sbjct: 103 LLTP 106 >gi|228982964|ref|ZP_04143223.1| hypothetical protein bthur0002_60970 [Bacillus thuringiensis Bt407] gi|228777147|gb|EEM25455.1| hypothetical protein bthur0002_60970 [Bacillus thuringiensis Bt407] Length = 292 Score = 37.9 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 20/66 (30%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V V I A +NES + + + Y I + G + LL I Sbjct: 51 VGTTIYVAKEDIQAKTEVNESMFTPVHIAKGGLLKGYVTDISQIKGAQLKGGLLKGEPIA 110 Query: 84 LSVLHR 89 L Sbjct: 111 TQRLES 116 >gi|269926136|ref|YP_003322759.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC BAA-798] gi|269789796|gb|ACZ41937.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC BAA-798] Length = 258 Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 22/68 (32%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + I G + S L+ SI D V + ++ +I +L Sbjct: 43 VVVAAQDIAQGSPITASMLETKPFPADFAPSEAVSSINDAVNRYSATNIVKGQIITRPLL 102 Query: 88 HRPYVISR 95 + + Sbjct: 103 SDTKQVGK 110 >gi|225375125|ref|ZP_03752346.1| hypothetical protein ROSEINA2194_00749 [Roseburia inulinivorans DSM 16841] gi|225212999|gb|EEG95353.1| hypothetical protein ROSEINA2194_00749 [Roseburia inulinivorans DSM 16841] Length = 257 Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDH 80 A V + + S + AGE L + L V + YA K+++G + L Sbjct: 10 AYVDTNVYLLSKALPAGEALTKDDLTSCTVKLPRSQSILYASDSKNLIGQYAKTALKKGQ 69 Query: 81 VIPLS-VLHRPYVISRG 96 ++ + R Sbjct: 70 LLTADFFYSDERLTERN 86 >gi|296393686|ref|YP_003658570.1| SAF domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180833|gb|ADG97739.1| SAF domain protein [Segniliparus rotundus DSM 44985] Length = 227 Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 22/70 (31%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 AVV + + G L + L ++ ++ + ++G + + Sbjct: 48 PGQAAAVVAAHDLRPGVALGPADLAVRSLSPGDVPAGAVADPRQLLGRTVAGPVRSGEAL 107 Query: 83 PLSVLHRPYV 92 + P + Sbjct: 108 TDVRIITPRL 117 >gi|297544463|ref|YP_003676765.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842238|gb|ADH60754.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 266 Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 17/123 (13%) Query: 9 FFSLYVLSLDSLFASVIG-----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 F+LY+ + + + G + + G+ L S G Sbjct: 1 MFNLYIKVKPLIASIIAGLFIFQSVFAATYTVKPGDTL---------WGISQRYGTTYTK 51 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + + GL + ++ P V+ + YV+ +G + +I + +T+ A + Sbjct: 52 LMALNGLQST-IIYPGQVLQVPGSDNTYVVQKGDSLYLIAKKYGITVDMLKSA--NGYKS 108 Query: 124 DVI 126 D+I Sbjct: 109 DII 111 >gi|145219385|ref|YP_001130094.1| SAF domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205549|gb|ABP36592.1| SAF domain protein [Chlorobium phaeovibrioides DSM 265] Length = 262 Score = 37.9 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 25/63 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V+ + I G+ + ++K + ++I +VVG + R ++P + Sbjct: 34 KVVIVAQPIELGKAITTEQIKTVNWPGADIPQGAVSKATEVVGRIARVSMMPGEPVLPGK 93 Query: 87 LHR 89 L Sbjct: 94 LAP 96 >gi|303241416|ref|ZP_07327919.1| SAF domain protein [Acetivibrio cellulolyticus CD2] gi|302591025|gb|EFL60770.1| SAF domain protein [Acetivibrio cellulolyticus CD2] Length = 255 Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 8/125 (6%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ LF + + + + S + GEV+ ++L+ ++V N+ N Sbjct: 16 CIVLSLFICFILTPMFNSGLKAQTEIIRISSDMKKGEVIAGNKLEVVKVGAYNLPQNIIK 75 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS-------RGAKVRIILTQGNMTISTAGI 115 +DVVG L+ I S + ++ G KV + +T + +G Sbjct: 76 RKEDVVGKYVNCDLMKGDYILSSKVTDKPLLEFEYLNDLDGTKVAMSITIKSFAAGLSGK 135 Query: 116 ALSDA 120 L Sbjct: 136 -LESG 139 >gi|298345527|ref|YP_003718214.1| hypothetical protein HMPREF0573_10401 [Mobiluncus curtisii ATCC 43063] gi|298235588|gb|ADI66720.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] Length = 211 Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 5 RFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 R +L +L +L++ + +V + +V + AG + ++ + G Sbjct: 17 RTVLGVALMILAVILVIVTVRVTSHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQ 76 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 Y + G V + + +IP + L + Sbjct: 77 YLREGEMQEGSVVVQTIAGGQLIPKASLSQ 106 >gi|221633004|ref|YP_002522229.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum DSM 5159] gi|221156453|gb|ACM05580.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum DSM 5159] Length = 331 Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 26/62 (41%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + + AG VL + ++ +++ A VVGLV L+ I L+ L P Sbjct: 49 AARDVRAGSVLTSEDVTVVETDPASVAPGTARQPDQVVGLVVAGDLVAGQRILLANLVLP 108 Query: 91 YV 92 V Sbjct: 109 SV 110 >gi|149179166|ref|ZP_01857734.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797] gi|148841984|gb|EDL56379.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797] Length = 591 Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%) Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147 ++I G L + + I V +T ++ +V+ V Sbjct: 209 HGISIKLPGTPLQNGQLHQKIKVVPANTNTLMPATVLSQNLV 250 >gi|296158793|ref|ZP_06841622.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1] gi|295890998|gb|EFG70787.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1] Length = 316 Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 36/144 (25%), Gaps = 20/144 (13%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 + VV + + G+ + L+ + + + G V Sbjct: 31 APVAVTPATHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGAFTEPAQLAGRVPN 88 Query: 74 RVLLPDHVIPLSVLHRPYV--ISRGAKVRIILTQGN----------------MTISTAGI 115 + D + S L + G + + T+ G Sbjct: 89 AEIGADSPVLESQLSSGLAERVEAGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDGG 148 Query: 116 ALSDASIGDVIAVKNIDTGVMVSG 139 ++ + D + + + V V Sbjct: 149 SMGNGGEIDRTQARLLMSKVRVLA 172 >gi|289615606|emb|CBI57652.1| putative non-ribosomal peptide synthase [Sordaria macrospora] Length = 5202 Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 11/123 (8%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 +S+YV + D + +V +P I E++ V G +++D++ Sbjct: 889 LWSVYVGNQDVVIGTVTSGRTIPVPGI--DEIIGP---CIATVPLRTDLGG-VRTVRDLL 942 Query: 69 G--LVTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMTISTAGIALSDASIG 123 G R ++ V+PL + R I G + V + + ++T G A + G Sbjct: 943 GSVQAVGREVVRHSVLPLKEIKRVAGIKAGQRPFEVLFVYQETLDNLTTPGDADKEGGKG 1002 Query: 124 DVI 126 ++ Sbjct: 1003 KIV 1005 >gi|300856049|ref|YP_003781033.1| putative cell wall-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436164|gb|ADK15931.1| putative cell wall binding protein [Clostridium ljungdahlii DSM 13528] Length = 321 Score = 37.9 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 25/52 (48%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 +V + I+ G ++++ +K++QV + I NY + G T + + Sbjct: 43 LVAAETISPGTLIDKKMIKKIQVPYNPIFDNYIKDSSKIAGKYTTETISKNE 94 >gi|289578182|ref|YP_003476809.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9] gi|289527895|gb|ADD02247.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9] Length = 266 Score = 37.9 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 17/123 (13%) Query: 9 FFSLYVLSLDSLFASVIG-----HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 F+LY+ + + + G + + G+ L S G Sbjct: 1 MFNLYIKVKPLIASIIAGLFIFQSVFAATYTVKPGDTL---------WGISQKYGTTYTK 51 Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 + + GL + ++ P V+ + YV+ +G + +I + +T+ A + Sbjct: 52 LMALNGLQST-IIYPGQVLQVPGSDNTYVVQKGDSLYLIAKKYGITVDMLKSA--NGYKS 108 Query: 124 DVI 126 D+I Sbjct: 109 DII 111 >gi|317506822|ref|ZP_07964596.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316254896|gb|EFV14192.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 227 Score = 37.5 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 23/66 (34%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV + + G L + L ++ + A + + +VG + + + Sbjct: 52 PVVVAAHDLKPGAALLPADLGIRRLPPDQVPEGAATAAEQLVGRTVAGPVRTGETLTDAR 111 Query: 87 LHRPYV 92 + P + Sbjct: 112 VIAPRL 117 >gi|147677784|ref|YP_001211999.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum SI] gi|146273881|dbj|BAF59630.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum SI] Length = 242 Score = 37.5 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 23/63 (36%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V I A + ++ + I A S +++VG + + +LP I Sbjct: 40 RVAVARQRITARTRITAQMIELKDIPAKYINELAAVSPEEIVGKIAKSEILPGEQILRDR 99 Query: 87 LHR 89 L + Sbjct: 100 LAQ 102 >gi|325964059|ref|YP_004241965.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans Sphe3] gi|323470146|gb|ADX73831.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans Sphe3] Length = 257 Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 23/110 (20%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 A+ + ++AG ++ + + ++V + + + D G L Sbjct: 80 APVSTVTALAAARDLSAGAAISPADVSAVRVPPGMMADGFLQNAGDAAGKQLAAPLRKGQ 139 Query: 81 VIPLSVLHRP-----------------------YVISRGAKVRIILTQGN 107 ++ + L P ++S G V ++LT GN Sbjct: 140 LLTDAQLLGPGLLAGTPPGSAAVPLRMADPSSIQLVSPGQLVNVVLTAGN 189 >gi|315656141|ref|ZP_07909032.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493143|gb|EFU82743.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 211 Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 5 RFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 R +L +L +L++ + +V + +V + AG + ++ + G Sbjct: 17 RTVLGVALMILAVILVIMTVRVASHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQ 76 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 Y + G V + + +IP + L + Sbjct: 77 YLREGEIQEGSVVVQTIAGGQLIPKASLSQ 106 >gi|302871578|ref|YP_003840214.1| N-acetylneuraminate synthase [Caldicellulosiruptor obsidiansis OB47] gi|302574437|gb|ADL42228.1| N-acetylneuraminate synthase [Caldicellulosiruptor obsidiansis OB47] Length = 348 Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 8/73 (10%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 ++D FA+V V I AG+VL + + + I+ Y + ++G +R Sbjct: 283 TMDFAFATV-----VAIKNIKAGDVLTKDNIWVKRPGIGEIKAEYYYD---LLGKRAKRD 334 Query: 76 LLPDHVIPLSVLH 88 +L D + + Sbjct: 335 ILEDEHLRWEDIE 347 >gi|149907439|ref|ZP_01896186.1| Type III antifreeze protein:CBS domain:NeuB family [Moritella sp. PE36] gi|149809109|gb|EDM69038.1| Type III antifreeze protein:CBS domain:NeuB family [Moritella sp. PE36] Length = 487 Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V I GE++ ++ S +G + + D++G R + + Sbjct: 402 LAKSLVAIRHIKPGEIITRDMVEIK----SPGQGLQPNRLNDLIGKKVDRDIERGGFFYM 457 Query: 85 SVL 87 S + Sbjct: 458 SDI 460 >gi|258510582|ref|YP_003184016.1| SAF domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477308|gb|ACV57627.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 264 Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 3/121 (2%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + +V+ + + A V S + GE + + V S + + Sbjct: 27 LVTAFVMDRVATHKVPMATAYVASHDLTVGETIGAKDVTRTVVPVSTLPPGALT--ASPI 84 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR-IILTQGNMTISTAGIALSDASIGDVIA 127 G + V+ L ++ ++ + +T+ST + ++D S+G + Sbjct: 85 GKTVTAPVYQGQVLVGGDLGHMGGVNGVMRLYGMQTRAYPLTLSTQSVPMTDISVGQAVD 144 Query: 128 V 128 V Sbjct: 145 V 145 >gi|91783010|ref|YP_558216.1| putative signal peptide protein, CpaB like [Burkholderia xenovorans LB400] gi|91686964|gb|ABE30164.1| Putative signal peptide protein, CpaB like protein [Burkholderia xenovorans LB400] Length = 316 Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 22/145 (15%) Query: 15 LSLDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 + ++ +V VV + + G+ + L+ + + + G V Sbjct: 30 PAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGAFTEPAQLAGRVP 87 Query: 73 RRVLLPDHVIPLSVLHRPYV--ISRGAKVRIILTQGN----------------MTISTAG 114 + D + S L + G + + T+ G Sbjct: 88 NAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDG 147 Query: 115 IALSDASIGDVIAVKNIDTGVMVSG 139 ++ + D + + + V V Sbjct: 148 GSMGNGGEIDRTQARLLMSKVRVLA 172 >gi|326204891|ref|ZP_08194744.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM 2782] gi|325984940|gb|EGD45783.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM 2782] Length = 283 Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + C+ L V L + S V S I AG+ +N + ++ ++V + N+ Sbjct: 12 VSCILLSLVICFAVTPLFNSSLSQRTSIVRVSRDIKAGDKINGNMVQTVEVGSYNLPSGV 71 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120 S DV+ + I ++ L V + + ++++ Sbjct: 72 IKSKDDVIDKYVLADMKEGDYILITKLSAAPVAENSYLHSLNGEKQAISVT--------- 122 Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 V++ +G +SG ++ V V+ Sbjct: 123 -------VRSFASG--LSGKLMPGDIVSVIA 144 >gi|134295594|ref|YP_001119329.1| SAF domain-containing protein [Burkholderia vietnamiensis G4] gi|134138751|gb|ABO54494.1| SAF domain protein [Burkholderia vietnamiensis G4] Length = 314 Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 3/74 (4%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 V + ++ A+ V+ + + AG+ + +K + +++ VVG V Sbjct: 35 VPAQPAVAAN-PAPVVIATRTLPAGQPIAADAVKLQAI--ASVPTGAVVDPATVVGRVPA 91 Query: 74 RVLLPDHVIPLSVL 87 R + I L Sbjct: 92 RDIPASAPITPDAL 105 >gi|209962930|gb|ACJ02245.1| putative nitrous oxide reductase [uncultured bacterium] Length = 233 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 14/114 (12%) Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV---GLVTRRV 75 FA +V + ++N + + V G R Sbjct: 94 PTFAEPHDCIIVRADIVNPKSIWTRDDPMWEDARQWAAKDGVNLDTDSKVIRDGNRVRVY 153 Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQ--------GNMTISTAGIALSDAS 121 ++ + S + + +G +V I +T +TI+ GIA+ + Sbjct: 154 MVS---VAPSFTMEKFTVKQGDEVTIFVTNMDRIDDLTHGLTIANYGIAMEVGA 204 >gi|326202872|ref|ZP_08192739.1| SAF domain protein [Clostridium papyrosolvens DSM 2782] gi|325986949|gb|EGD47778.1| SAF domain protein [Clostridium papyrosolvens DSM 2782] Length = 216 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 22/121 (18%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 Y+ + + VV + I G V+ E L++ QV S + I +V G Sbjct: 27 YIFTKYPINTEKTVAVVVATENIKEGTVIEEGFLRKKQVYASGVNSGVETEIGNVAGKKA 86 Query: 73 RRVLLPDHVIPLSVL----------------------HRPYVISRGAKVRIILTQGNMTI 110 + D I L +I +G+ V I L + + Sbjct: 87 LTNIHRDDYIRAHDLLERKDWYRDDERIIILPVSMEERLANLIRKGSYVDIRLQRDTSEV 146 Query: 111 S 111 + Sbjct: 147 T 147 >gi|85373132|ref|YP_457194.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594] gi|84786215|gb|ABC62397.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594] Length = 371 Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 4/68 (5%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 +V + G ++ L ++ Y I ++G V R + + Sbjct: 46 KVLVAQRGLPVGTIITADALGFQMWPEELVQDAYFIEGESDITQLLGTVVRHPVTAGEPL 105 Query: 83 PLSVLHRP 90 L P Sbjct: 106 TQGTLVSP 113 >gi|288870575|ref|ZP_06114611.2| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] gi|288866630|gb|EFC98928.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] Length = 275 Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 7/102 (6%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 S + G ++ + ++ +V + N+ N A S +DVVG L+ I S + Sbjct: 44 SKPVLKGAIITDKNVELAEVGSYNLPANIARSTEDVVGKYAVSDLMEGDYILSSKISALP 103 Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDA-----SIGDVIAV 128 + S + G + IS + L+ GD++ + Sbjct: 104 LTS--DIALNDIPSGRVAISLSVKTLASGLSDKLQAGDIVRI 143 >gi|153834861|ref|ZP_01987528.1| sialic acid synthase [Vibrio harveyi HY01] gi|148868732|gb|EDL67809.1| sialic acid synthase [Vibrio harveyi HY01] Length = 333 Score = 37.5 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ ++V I+AG+++ L+ + N G +VVG V ++ +I Sbjct: 279 VVRKSIVAGQEISAGQLITPDMLEIKRPGN----GISPTRWDEVVGSVAKKDYQIGELI 333 >gi|300788927|ref|YP_003769218.1| SAF domain-containing protein [Amycolatopsis mediterranei U32] gi|299798441|gb|ADJ48816.1| SAF domain-containing protein [Amycolatopsis mediterranei U32] Length = 221 Score = 37.1 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 AV + + GEV+ L+E+QV + +R DVVG + L P ++ Sbjct: 61 AVGVARPVRYGEVITADALREVQVRPDPGVRPLPWDRRFDVVGRTSPTDLQPGEIVTPDA 120 Query: 87 LHRPYVI 93 + P ++ Sbjct: 121 VTDPAIV 127 >gi|167908128|ref|ZP_02495333.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei NCTC 13177] Length = 256 Score = 37.1 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVARTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|254478253|ref|ZP_05091634.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] gi|214035849|gb|EEB76542.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653] Length = 181 Score = 37.1 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V+ I AG V++E +K + V S + +YA S DVVG V + + IP Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVIDVPASVVNPDYARSPADVVGKVVKEGRVRGDFIP 87 >gi|27381082|ref|NP_772611.1| polysaccharide biosynthesis related protein [Bradyrhizobium japonicum USDA 110] gi|27354248|dbj|BAC51236.1| blr5971 [Bradyrhizobium japonicum USDA 110] Length = 641 Score = 37.1 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + I AG V+++ + S +G + ++G + +R + D Sbjct: 295 LAKSLVAARDIEAGTVISDDDIAVK----SPGQGLSPLKMPALIGKILKRKMAADDYFFQ 350 Query: 85 SVLHR 89 S L Sbjct: 351 SDLDE 355 >gi|167841424|ref|ZP_02468108.1| putative pilus assembly protein CpaB [Burkholderia thailandensis MSMB43] Length = 281 Score = 37.1 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + +N GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|187478777|ref|YP_786801.1| pilus assembly protein [Bordetella avium 197N] gi|115423363|emb|CAJ49897.1| putative pilus assembly protein [Bordetella avium 197N] Length = 270 Score = 37.1 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 36/90 (40%), Gaps = 7/90 (7%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLLPDH 80 V+ +V + AG++L E + ++ + S + ++G + ++ Sbjct: 59 VMVTRLVAWADLEAGQLLTEDDIASREIPKNWAPHQSL-SPEQTGLLIGSRLKVPVMAGQ 117 Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTI 110 I + + +S G R+ + + +T+ Sbjct: 118 PILQADIE---FVSPGTAARLGVGKRALTL 144 >gi|229065648|ref|ZP_04200877.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus AH603] gi|228715621|gb|EEL67416.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus AH603] Length = 331 Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V V I GE++ +++ N ++++ V L + V+ Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|220932531|ref|YP_002509439.1| N-acetylneuraminate synthase [Halothermothrix orenii H 168] gi|219993841|gb|ACL70444.1| N-acetylneuraminate synthase [Halothermothrix orenii H 168] Length = 331 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 ++ ++V + I GE E L + + I Y ++G V +R D +I Sbjct: 274 DIVRKSIVAAHSIRKGERFTEGNLTVKR-PGNGISPMYW---DQIIGKVAKRDYKKDELI 329 >gi|85709744|ref|ZP_01040809.1| N-acylneuraminate-9-phosphate synthase [Erythrobacter sp. NAP1] gi|85688454|gb|EAQ28458.1| N-acylneuraminate-9-phosphate synthase [Erythrobacter sp. NAP1] Length = 749 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+G ++V + I G +L + S +G + KD++G + + Sbjct: 400 EVLGKSLVAARPIMRGAMLCDEDFAVR----SPGQGLEPYRRKDLLGCAAKHDMKAGDFF 455 Query: 83 PLSVLHRPYVISRG 96 S L +R Sbjct: 456 FPSDLDEERTKARN 469 >gi|167924331|ref|ZP_02511422.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei BCC215] Length = 281 Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|307265038|ref|ZP_07546599.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306920023|gb|EFN50236.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 181 Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV I AG V++E +K + V S + +YA S DVVG V + + IP Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKVIDVPASVVNPSYARSPADVVGKVVKDGRVKGDFIP 87 >gi|229014866|ref|ZP_04171963.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus mycoides DSM 2048] gi|228746447|gb|EEL96353.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus mycoides DSM 2048] Length = 331 Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V V I GE++ +++ N ++++ V L + V+ Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|229170303|ref|ZP_04297981.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus AH621] gi|228613164|gb|EEK70311.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus AH621] Length = 331 Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V V I GE++ +++ N ++++ V L + V+ Sbjct: 17 VTKVDIKKGEIITANKVDMELGIVENALNQL--QFEELLPQVALYNLQAGTPLTKEVIEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|195055885|ref|XP_001994843.1| GH13892 [Drosophila grimshawi] gi|193892606|gb|EDV91472.1| GH13892 [Drosophila grimshawi] Length = 376 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G ++V + ++ G + S L S I ++G+ R + D I Sbjct: 315 LGKSIVAARDLDKGHKIQVSDLTIKVSEPSGISAETYFD---IIGMQLTRSVNQDEPIIE 371 Query: 85 SVL 87 +VL Sbjct: 372 NVL 374 >gi|187919323|ref|YP_001888354.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN] gi|187717761|gb|ACD18984.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN] Length = 269 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + S ++ VV + IN G+ + LK ++++ I+ + G V + L Sbjct: 20 MVSQSSNATTRVVVAAADINLGQRIGPDYLKLTDWPSNSVPPGSYSDIQKLDGRVLKESL 79 Query: 77 LPDHVI 82 L I Sbjct: 80 LRGEPI 85 >gi|254192395|ref|ZP_04898834.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei S13] gi|169649153|gb|EDS81846.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei S13] Length = 281 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|167744174|ref|ZP_02416948.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 14] Length = 281 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|167725246|ref|ZP_02408482.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei DM98] Length = 245 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|156972992|ref|YP_001443899.1| sialic acid synthase [Vibrio harveyi ATCC BAA-1116] gi|156524586|gb|ABU69672.1| hypothetical protein VIBHAR_00670 [Vibrio harveyi ATCC BAA-1116] Length = 333 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+ ++V I+AG++++ L+ + N G +VVG V ++ +I Sbjct: 279 VVRKSIVAGQEISAGQLISPDMLEIKRPGN----GISPTRWDEVVGSVAKKDYQIGELI 333 >gi|53723206|ref|YP_112191.1| pilus assembly-related, exported protein [Burkholderia pseudomallei K96243] gi|76817358|ref|YP_336468.1| pilus assembly transmembrane protein [Burkholderia pseudomallei 1710b] gi|126444606|ref|YP_001064075.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 668] gi|126455786|ref|YP_001076988.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1106a] gi|167829714|ref|ZP_02461185.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 9] gi|167899812|ref|ZP_02487213.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 7894] gi|167916475|ref|ZP_02503566.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 112] gi|217424287|ref|ZP_03455786.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 576] gi|226194084|ref|ZP_03789685.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei Pakistan 9] gi|237507313|ref|ZP_04520028.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346] gi|242313081|ref|ZP_04812098.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1106b] gi|254182584|ref|ZP_04889178.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1655] gi|254187135|ref|ZP_04893650.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei Pasteur 52237] gi|254262844|ref|ZP_04953709.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1710a] gi|254296484|ref|ZP_04963940.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 406e] gi|52213620|emb|CAH39674.1| putative pilus assembly-related, exported protein [Burkholderia pseudomallei K96243] gi|76581831|gb|ABA51305.1| pilus assembly transmembrane protein [Burkholderia pseudomallei 1710b] gi|126224097|gb|ABN87602.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 668] gi|126229554|gb|ABN92967.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1106a] gi|157806446|gb|EDO83616.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 406e] gi|157934818|gb|EDO90488.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei Pasteur 52237] gi|184213119|gb|EDU10162.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1655] gi|217392752|gb|EEC32775.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 576] gi|225934029|gb|EEH30015.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei Pakistan 9] gi|234999518|gb|EEP48942.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346] gi|242136320|gb|EES22723.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1106b] gi|254213846|gb|EET03231.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 1710a] Length = 281 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|304391083|ref|ZP_07373035.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325966|gb|EFL93212.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 187 Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 12 LYVLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + + L + V H +V + AG + ++ + G Y + Sbjct: 2 ILAVILVIVTVRVTSHLEGYLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGEMQE 61 Query: 69 GLVTRRVLLPDHVIPLSVLHR 89 G V + + +IP + L + Sbjct: 62 GSVVVQTIAGGQLIPKASLSQ 82 >gi|308234323|ref|ZP_07665060.1| Flp pilus assembly protein CpaB [Atopobium vaginae DSM 15829] Length = 272 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 6/72 (8%), Positives = 22/72 (30%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + + VV + + G+ + + + + + DV+G + + Sbjct: 40 IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 99 Query: 78 PDHVIPLSVLHR 89 + + Sbjct: 100 ENVPLSTMHFTE 111 >gi|302387867|ref|YP_003823689.1| SAF domain protein [Clostridium saccharolyticum WM1] gi|302198495|gb|ADL06066.1| SAF domain protein [Clostridium saccharolyticum WM1] Length = 283 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 28/87 (32%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + + + V + I G+ + + ++ N+ + + Sbjct: 15 CIITALIICFGLTPMFNNALQSKVELVRVTTEIKKGDEITAGMITAVETGGYNLPSDVIY 74 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHR 89 +DV+G L I S L Sbjct: 75 KKEDVIGKFANADLYKGDYILKSKLSD 101 >gi|317133361|ref|YP_004092675.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3] gi|315471340|gb|ADU27944.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3] Length = 287 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 12/131 (9%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 + + + L + V +I G + + ++ QV+ N++ N Sbjct: 45 SIGLAVVVGFGGVFLVNRLTMATVPVVRAKEIIPQGTQITPNMIEVDQVSKYNLQSNVTG 104 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120 + VVG ++P I L + + L G M +S LSDA Sbjct: 105 NTSLVVGAYATTEIMPQDNITGDKLSKSNPVY-------TLDTGEMLVSVPVKNLSDALA 157 Query: 121 ---SIGDVIAV 128 GD++ V Sbjct: 158 GQLKAGDIVRV 168 >gi|167851181|ref|ZP_02476689.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei B7210] Length = 253 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|251795111|ref|YP_003009842.1| SAF domain protein [Paenibacillus sp. JDR-2] gi|247542737|gb|ACS99755.1| SAF domain protein [Paenibacillus sp. JDR-2] Length = 237 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 9/139 (6%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 L + L+ L + +V + AG L E+ + ++ K Sbjct: 20 LVYGLFQLQKLQVTRGETVEVIVAKQFVEAGRRLTEADIAYKRIPREGYEHEMLVDAKQA 79 Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 VG+ T L + I + + +++ G + + + + + GI GD + Sbjct: 80 VGMETVIPLGTNEPILGWKIDKYHLLPTGLESTFQIPRDYVRSISNGI-----RAGDKVT 134 Query: 128 V----KNIDTGVMVSGSVV 142 V +N + + V Sbjct: 135 VYLSGENEPSRRIFDSLVT 153 >gi|147900772|ref|NP_001087593.1| N-acetylneuraminic acid synthase [Xenopus laevis] gi|51513381|gb|AAH80398.1| MGC84329 protein [Xenopus laevis] Length = 359 Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G +VV V I AG VL + L V + RG I D+ G +R + D + Sbjct: 291 LGKSVVAKVKIPAGTVLTLNMLT---VKVAEPRGFPPEEIYDLEGKTLKREIEEDDSVTE 347 Query: 85 SVLH 88 + Sbjct: 348 EAIE 351 >gi|167821373|ref|ZP_02453053.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 91] Length = 251 Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|78186538|ref|YP_374581.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273] gi|78166440|gb|ABB23538.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273] Length = 262 Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 25/63 (39%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V+ ++ I G+ + ++K + ++ + DVV + R ++P + Sbjct: 34 KVVIVALPIELGKAITAEQIKAVNWPGTDAPQGAYANTADVVSRIARVSMMPGEPVLPGK 93 Query: 87 LHR 89 L Sbjct: 94 LAP 96 >gi|322389754|ref|ZP_08063301.1| pyruvate phosphate dikinase [Streptococcus parasanguinis ATCC 903] gi|321143593|gb|EFX39024.1| pyruvate phosphate dikinase [Streptococcus parasanguinis ATCC 903] Length = 872 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D+ G++ + ++ + V++RG + G +TIS +LS S Sbjct: 428 TSPEDIEGMIVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEENKSLSCGS 484 Query: 122 I----GDVIAVKNIDTGVMVSG 139 + GD+I+V + +G + G Sbjct: 485 LVLREGDLISV-DGYSGRIYRG 505 >gi|319947190|ref|ZP_08021424.1| pyruvate phosphate dikinase [Streptococcus australis ATCC 700641] gi|319747238|gb|EFV99497.1| pyruvate phosphate dikinase [Streptococcus australis ATCC 700641] Length = 873 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D+ G++ + ++ + V++RG + G +TIS +LS S Sbjct: 428 TSPEDIEGMIVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELTISEENKSLSCGS 484 Query: 122 I----GDVIAVKNIDTGVMVSG 139 + GD+I+V + +G + G Sbjct: 485 LVLREGDLISV-DGYSGRIYRG 505 >gi|328943875|ref|ZP_08241340.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM 15829] gi|327491844|gb|EGF23618.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM 15829] Length = 255 Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 6/72 (8%), Positives = 22/72 (30%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + + VV + + G+ + + + + + DV+G + + Sbjct: 23 IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 82 Query: 78 PDHVIPLSVLHR 89 + + Sbjct: 83 ENVPLSTMHFTE 94 >gi|134097376|ref|YP_001103037.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL 2338] gi|291009066|ref|ZP_06567039.1| hypothetical protein SeryN2_31485 [Saccharopolyspora erythraea NRRL 2338] gi|133909999|emb|CAM00111.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL 2338] Length = 183 Score = 36.8 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 17/64 (26%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V + + G VL + + G + + G V + Sbjct: 23 PVLVAARDLAPGHVLEPDDVARRTMPAELAPGGVLSEVDEATGRVLGTASRSGEPLTDVR 82 Query: 87 LHRP 90 L P Sbjct: 83 LAGP 86 >gi|120603674|ref|YP_968074.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris DP4] gi|120563903|gb|ABM29647.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris DP4] Length = 352 Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V + I AG+VL + L + + Y +VVG+ R + D V+ Sbjct: 295 RSLVAARAIPAGKVLEPADLTWKRPAHGISPRCY----DEVVGMKARADIAEDTVLKWGH 350 Query: 87 LH 88 L Sbjct: 351 LE 352 >gi|46578765|ref|YP_009573.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448177|gb|AAS94832.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232632|gb|ADP85486.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris RCH1] Length = 352 Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V + I AG+VL + L + + Y +VVG+ R + D V+ Sbjct: 295 RSLVAARAIPAGKVLEPADLTWKRPAHGISPRCY----DEVVGMKARADIAEDTVLKWGH 350 Query: 87 LH 88 L Sbjct: 351 LE 352 >gi|89897311|ref|YP_520798.1| hypothetical protein DSY4565 [Desulfitobacterium hafniense Y51] gi|89336759|dbj|BAE86354.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 277 Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 6 FLLFFSLYVL-SLDSLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYA 61 + SL++ L LF + V I +G V+ + ++ ++V + N+ N Sbjct: 13 LCIVLSLFICFVLTPLFNQGVARKATVVRVVKDIKSGGVITKDMVQTVEVGSYNLPENVI 72 Query: 62 HSIKDVVGLVTRRVLLPDHVI 82 + V+G LLP I Sbjct: 73 RQSETVIGKYAEADLLPGDSI 93 >gi|332188388|ref|ZP_08390113.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17] gi|332011617|gb|EGI53697.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17] Length = 329 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 10/101 (9%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIP 83 +V + + G +++ + LK + G Y + + G V R + + Sbjct: 51 VLVATRALPVGTIIDATALKFQPWPKEMVGGAYYLKGQADLAKLQGTVVRYAITAGQPLT 110 Query: 84 LSVLHRPYVISRGAKVRIILT-QGNMTISTAGIALSDASIG 123 + +P G + + M T ++ G Sbjct: 111 QGAVVQP-----GDRGFLAAALTPGMRAVTVPVSAQTGVAG 146 >gi|323341956|ref|ZP_08082189.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464381|gb|EFY09574.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414] Length = 269 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 4/106 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV + A + + ++ V + VVG VT + + Sbjct: 36 LTQVVVALKPLTAQTRITQDMIEVKNVHKDAAPEGAFADAERVVGKVTTTKMSVGDMFTG 95 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130 + V+ +G+ + NM T + G +I V N Sbjct: 96 ---EKVEVVGQGSSGLSTVLTDNMRAYTVKLEGQYGMQG-LIRVGN 137 >gi|228918804|ref|ZP_04082202.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228840876|gb|EEM86120.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 585 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 ++ + IN GE++ + + N + + ++ V + + + I +++ Sbjct: 272 LIANKEINKGEIIPIQKTSYKRCDNEKA--LMPLNAEKLLPQVAKNTIQFNEPITANMIE 329 Query: 89 RPYV 92 +P + Sbjct: 330 KPKI 333 >gi|114321312|ref|YP_742995.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227706|gb|ABI57505.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola ehrlichii MLHE-1] Length = 316 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 26 GHAVVPSVV-INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 GH VV +V + G+++ E+ + T + ++V+GL + ++ Sbjct: 55 GHPVVFAVTELEPGQLVGEADIHTE--TLRRVPPLAFSDPEEVIGLRVEAPIQEGELLTA 112 Query: 85 SVLHRPYVISRG 96 +SRG Sbjct: 113 PRFSVASQVSRG 124 >gi|83589197|ref|YP_429206.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC 39073] gi|83572111|gb|ABC18663.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC 39073] Length = 212 Score = 36.8 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 A+ V I AGE + + ++V S + A + KD+ G + LL D Sbjct: 32 ATKTVEVVKAVRFIPAGERITADSITTVRVPES-MASGLATNPKDLEGKEAKVSLLKDQF 90 Query: 82 I 82 + Sbjct: 91 V 91 >gi|284992651|ref|YP_003411205.1| SAF domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284065896|gb|ADB76834.1| SAF domain protein [Geodermatophilus obscurus DSM 43160] Length = 317 Score = 36.8 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 25/75 (33%) Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 + A + + AG VL L + V ++ G Y + G R Sbjct: 55 ARVVTAADATVPVWSAAGDLAAGTVLAAGDLVAVDVRLDDVAGAYLATSTRPEGRTLARA 114 Query: 76 LLPDHVIPLSVLHRP 90 + ++P + L P Sbjct: 115 VRNGELLPRTALEEP 129 >gi|229827062|ref|ZP_04453131.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC 49176] gi|229788680|gb|EEP24794.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC 49176] Length = 278 Score = 36.8 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 3/82 (3%) Query: 14 VLSLDSLFASVIGHA--VVP-SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 L L+ ++ VV I GE++ +L+ + V + + SI + G Sbjct: 22 AFVLTPLYGGILEKQEEVVRVKEKITEGELITADKLETVNVGAYGLSPDVVKSIDGITGK 81 Query: 71 VTRRVLLPDHVIPLSVLHRPYV 92 + I L + Sbjct: 82 YAKTDFYKGSYITGEGLSDVAL 103 >gi|170692565|ref|ZP_02883727.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M] gi|170142221|gb|EDT10387.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M] Length = 278 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ G+ LN + ++ + +++ K + G V R L P Sbjct: 33 SSALTPVAVATAEVSLGQPLNSTMIRTVNWPTASVPPGAFKDPKALDGRVVRASLEPGEP 92 Query: 82 IPLSVLHRP 90 + S L Sbjct: 93 VIESKLAPQ 101 >gi|167038605|ref|YP_001666183.1| SAF domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116994|ref|YP_004187153.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857439|gb|ABY95847.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319930085|gb|ADV80770.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 181 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V+ I AG V++E +K + V S ++ NYA S+ +VVG V + + IP Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDVPASAVKPNYARSLSNVVGKVVKEGRVRGDFIP 87 >gi|83717368|ref|YP_440455.1| pilus assembly protein [Burkholderia thailandensis E264] gi|167617228|ref|ZP_02385859.1| pilus assembly protein [Burkholderia thailandensis Bt4] gi|257141103|ref|ZP_05589365.1| pilus assembly protein [Burkholderia thailandensis E264] gi|83651193|gb|ABC35257.1| pilus assembly protein [Burkholderia thailandensis E264] Length = 279 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + +N GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|266619843|ref|ZP_06112778.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] gi|288868552|gb|EFD00851.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] Length = 283 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 4/92 (4%) Query: 7 LLFFSLYVL-SLDSLFASVIGHAVVPSVV---INAGEVLNESRLKEMQVTNSNIRGNYAH 62 + SL + + +F + V V I GE + + + ++ N+ N + Sbjct: 15 CIVVSLLICFGITPMFNDALKSKVTLVRVTKEIRTGEQITDKMVTSVEAVGYNLPSNVIY 74 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I++VVG L I S L ++ Sbjct: 75 KIEEVVGKYANADLYKGDYILKSKLSDTPMLR 106 >gi|289642191|ref|ZP_06474342.1| SAF domain protein [Frankia symbiont of Datisca glomerata] gi|289508037|gb|EFD28985.1| SAF domain protein [Frankia symbiont of Datisca glomerata] Length = 275 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 28/86 (32%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 V + VV + + G + + ++ + + + S +D VG Sbjct: 39 FAVAAARPARPPSPTPVVVAAADLAGGATMAATDVRMVSLPTDVVPVGAVRSPQDAVGRT 98 Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGA 97 + I + + P +I+R Sbjct: 99 LTAAVRQGEPITDARVLGPGLITRRQ 124 >gi|304405122|ref|ZP_07386782.1| SAF domain protein [Paenibacillus curdlanolyticus YK9] gi|304346001|gb|EFM11835.1| SAF domain protein [Paenibacillus curdlanolyticus YK9] Length = 240 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + VVP I AGE L + L + S ++ + + + G L + + Sbjct: 37 MVRIVVPKRFIAAGERLEAADLTYRSIAKSAVQQDMVLELVEADGWEAVVPLGAEEPL 94 >gi|195110807|ref|XP_001999971.1| GI24828 [Drosophila mojavensis] gi|193916565|gb|EDW15432.1| GI24828 [Drosophila mojavensis] Length = 377 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G ++V S + G+++ + + + S G YA +++ + D I Sbjct: 316 LGKSIVASRNLLKGQIIQAADIA---IKVSEPSGIYAERYFEIINKQLTDNVNEDEPITE 372 Query: 85 SVLHR 89 VL Sbjct: 373 HVLSA 377 >gi|193213116|ref|YP_001999069.1| Flp pilus assembly protein CpaB [Chlorobaculum parvum NCIB 8327] gi|193086593|gb|ACF11869.1| Flp pilus assembly protein CpaB [Chlorobaculum parvum NCIB 8327] Length = 263 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 V+ ++ I+AG+V+ ++K +Q +S + N DVVG V R ++ + Sbjct: 34 AKVVIVAMPIDAGKVIAPDQIKAVQWPSSAVPLNAFARTADVVGRVARVSMIAGEPVLP 92 >gi|167579113|ref|ZP_02371987.1| pilus assembly protein [Burkholderia thailandensis TXDOH] Length = 279 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + +N GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + + L Sbjct: 93 VLGTKLAP 100 >gi|326793922|ref|YP_004311742.1| N-acetylneuraminate synthase [Marinomonas mediterranea MMB-1] gi|326544686|gb|ADZ89906.1| N-acetylneuraminate synthase [Marinomonas mediterranea MMB-1] Length = 750 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V + + G+++ + LK M S +G I ++VG +R + Sbjct: 401 ETLAKSIVAAASLKKGQLVTRNVLKIM----SPGQGLQPVYIDELVGRPAKRDISEGDYF 456 Query: 83 PLSVLHRPYVISR 95 S L + +R Sbjct: 457 YESDLDGEILEAR 469 >gi|317486066|ref|ZP_07944919.1| NeuB family protein [Bilophila wadsworthia 3_1_6] gi|316922693|gb|EFV43926.1| NeuB family protein [Bilophila wadsworthia 3_1_6] Length = 352 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V + I AG+++++ L + +Y +V+G+ R + D V+ + Sbjct: 295 RSLVANRNIPAGKIIDKDDLTWKRPAGGISPRHYY----EVLGMAARADIEEDTVLQWAH 350 Query: 87 LH 88 L Sbjct: 351 LE 352 >gi|229194313|ref|ZP_04321146.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus ATCC 10876] gi|228589166|gb|EEK47152.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus cereus ATCC 10876] Length = 331 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + I GE++ +++ N ++++ + L + V+ Sbjct: 17 VTKIDIKKGEIITANKIAMELDVVENALNQL--EAEELLPQIALYNLSAGTPLSKEVMEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|254445443|ref|ZP_05058919.1| NeuB family [Verrucomicrobiae bacterium DG1235] gi|198259751|gb|EDY84059.1| NeuB family [Verrucomicrobiae bacterium DG1235] Length = 345 Score = 36.8 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ S I AGEV L+ ++ + ++ ++++G +R L + Sbjct: 289 RSIYASQDIEAGEVFTTENLRIVRPSLGLGPKHW----EEILGTTAKRNLAAGTPLSKQD 344 Query: 87 L 87 L Sbjct: 345 L 345 >gi|255020087|ref|ZP_05292158.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC 51756] gi|254970449|gb|EET27940.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC 51756] Length = 419 Score = 36.8 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 2/64 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVIPL 84 AVVP I G +L+ S + + + + G LL I Sbjct: 67 KAVVPVQDIAPGTILDLSMVAARSIPADTAPSDVITPETFDQYAGHRVNVPLLQGRPILA 126 Query: 85 SVLH 88 S L Sbjct: 127 SYLS 130 >gi|257784838|ref|YP_003180055.1| SAF domain-containing protein [Atopobium parvulum DSM 20469] gi|257473345|gb|ACV51464.1| SAF domain protein [Atopobium parvulum DSM 20469] Length = 275 Score = 36.8 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 5/83 (6%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + I GE L+ S + + I + + V+G V+ + L Sbjct: 51 LVATKQIEPGETLSSSNTQVKSWISDLIPEGAITNPESVMGRTVSSVIGVGMPVVSLHLR 110 Query: 89 RPYVISRGAKVRIILTQGNMTIS 111 +++ I +TIS Sbjct: 111 SVA-----SQITIPENLIGLTIS 128 >gi|312794261|ref|YP_004027184.1| SAF domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181401|gb|ADQ41571.1| SAF domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 194 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 3/92 (3%) Query: 4 VRFLLFFSLYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + ++ V L +F S + V +I+ GE+++++ + +++ + + Sbjct: 6 IKLAVIPAVLVALLSYIFISRQTNMIQVPVAKNLIHQGEIIDDNDITFLKLPSYALPPGT 65 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + +VG + V+ YV Sbjct: 66 VKEKEQLVGKRAGVTRVAGDFFYDDVIKSVYV 97 >gi|291486232|dbj|BAI87307.1| hypothetical protein BSNT_05583 [Bacillus subtilis subsp. natto BEST195] Length = 592 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 2/64 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V + I GE++ + + N N +D V L + + + + Sbjct: 278 VTANRNIKKGEIITLEKTSYKRCGNENA--LMPLQAEDAFPQVATADLSLNQPVTPNDIK 335 Query: 89 RPYV 92 +P + Sbjct: 336 KPRI 339 >gi|222530414|ref|YP_002574296.1| hypothetical protein Athe_2455 [Caldicellulosiruptor bescii DSM 6725] gi|222457261|gb|ACM61523.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM 6725] Length = 194 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV---VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + ++ V L +F S + + V +I+ GE++N++ + +++ + + Sbjct: 6 IKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNLIHQGEIINDNDITFLKLPSYALPRGV 65 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + +VG + V+ YV Sbjct: 66 IKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYV 97 >gi|184200331|ref|YP_001854538.1| hypothetical protein KRH_06850 [Kocuria rhizophila DC2201] gi|183580561|dbj|BAG29032.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 223 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 4/107 (3%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 + V + + AG L L Q + S + G + L P Sbjct: 46 GARTAPVVTAAHEVPAGTSLGAGDLAVSQFPEALAPTGAYASPAEAQGQTSAVALTPGQP 105 Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 + S + P V++ G + +S + L GD + V Sbjct: 106 VTSSTVLGPGVLT-GQPTGTTAAT--VRVSDPAV-LRHVRPGDAVDV 148 >gi|167584956|ref|ZP_02377344.1| Flp pilus assembly CpaB [Burkholderia ubonensis Bu] Length = 280 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 25/67 (37%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + V + +N GE + ++++ + ++ K + G V R L + Sbjct: 34 SAVTQVAVATTDLNLGEPIGPAQIRTISWPTGSVPPGAFTDTKSLEGRVVRTSLARGEPV 93 Query: 83 PLSVLHR 89 + L Sbjct: 94 LEAKLAP 100 >gi|89897409|ref|YP_520896.1| hypothetical protein DSY4663 [Desulfitobacterium hafniense Y51] gi|89336857|dbj|BAE86452.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 286 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 18/149 (12%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L + L + S V I AG+ + + + ++V N+ + Sbjct: 26 CIVLSLVICFALTPLFNQSVSQKASVVRVVKEIKAGDAITKDMFQTVEVGEYNLPEDVIK 85 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 V+G L+P I + L + + +++S Sbjct: 86 QQDSVLGKYAVADLVPGDYILSAKLSDTPASENAYLYNLSGDKQAISVS----------- 134 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +KN G +SG ++ V V+ Sbjct: 135 -----IKNFAGG--LSGKLISGDIVSVIA 156 >gi|313902408|ref|ZP_07835811.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM 13965] gi|313467339|gb|EFR62850.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM 13965] Length = 302 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 7/94 (7%) Query: 1 MDCVRFLLFFSLYVLSLDS-------LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN 53 M + + SL V L L A+ VV + + A + + + + Sbjct: 1 MPRMSWRAAASLGVALLAGTTAYLIYLDATASLPVVVATRPLRAPLNVEADMVSVVPLPA 60 Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 + + V+G V RR + + + + Sbjct: 61 AAVHPRAVGDPSRVIGHVLRRDVEAGEPLLEADV 94 >gi|284802136|ref|YP_003414001.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5578] gi|284995278|ref|YP_003417046.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5923] gi|284057698|gb|ADB68639.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5578] gi|284060745|gb|ADB71684.1| pilus assembly protein CpaB [Listeria monocytogenes 08-5923] Length = 284 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 18/149 (12%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V + I G+ + + ++ ++V + N+ + Sbjct: 14 CIVLSLIICFAVTPLFNKGMSQKTEIVRVTKDIKIGDEITKDMVQIVEVGSYNLPEDVVK 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + + V+G ++P I S + + + M++S Sbjct: 74 NTETVLGKFASADMVPGDYIISSKIAAEPAAENAYLYNLTGEKQAMSVS----------- 122 Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151 VK+ TG +SG +V V ++ Sbjct: 123 -----VKSFATG--LSGKLVSGDIVSIIA 144 >gi|260904284|ref|ZP_05912606.1| SAF domain-containing protein [Brevibacterium linens BL2] Length = 209 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 23/74 (31%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + + G L L ++ + S+ D T L + S + Sbjct: 52 VVANRNLPPGSQLRTQDLTLVEFPARLVPDKAFTSVSDADHKRTSAGLSKGSPLTQSAVL 111 Query: 89 RPYVISRGAKVRII 102 + G+ ++ Sbjct: 112 DQQALPDGSTDLLM 125 >gi|18075741|emb|CAD11293.1| sialic acid synthase [Helicobacter pylori] gi|18075745|emb|CAD11296.1| sialic acid synthase [Helicobacter pylori] Length = 127 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93 I GE L E+ +K ++ Y K+++G + L + + + RP + Sbjct: 73 IQKGEALTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLSADDIERPLQV 127 >gi|118474466|ref|YP_892689.1| sialic acid synthase [Campylobacter fetus subsp. fetus 82-40] gi|118413692|gb|ABK82112.1| sialic acid synthase [Campylobacter fetus subsp. fetus 82-40] Length = 340 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 I GE+L ++ ++ N Y +++G ++ L + + L + Sbjct: 291 IKKGEILTPQNIRSIRPNNGLHPKFY----DEILGKTAKKDLEFGYPLSLDDIR 340 >gi|218710407|ref|YP_002418028.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32] gi|218323426|emb|CAV19603.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32] Length = 279 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 22/64 (34%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV S I AG ++ E L + I N ++VG V + V+ Sbjct: 75 PVVVASQEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVANTIYAGEVLHKMR 134 Query: 87 LHRP 90 P Sbjct: 135 FTIP 138 >gi|298345610|ref|YP_003718297.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC 43063] gi|304390701|ref|ZP_07372654.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657893|ref|ZP_07910773.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235671|gb|ADI66803.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC 43063] gi|304326457|gb|EFL93702.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491690|gb|EFU81301.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 198 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 2/83 (2%) Query: 12 LYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 L V +LF VV + AG + ++ + S + ++ V+G Sbjct: 20 LAVFVAVTLFLPEKAAATVVVVKHEVCAGCEITAQDVRLSALAPSAVPQDHFQKADRVIG 79 Query: 70 LVTRRVLLPDHVIPLSVLHRPYV 92 L V+ ++L V Sbjct: 80 KTAAVSLTSGTVLQPALLVENAV 102 >gi|317122041|ref|YP_004102044.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM 12885] gi|315592021|gb|ADU51317.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM 12885] Length = 284 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L A+ VV + + A + + V + + VVG V RR + Sbjct: 27 LDATASLPVVVATQALQAPLKIEPGMVAVSHVPAAAVHPEAVSDPAAVVGRVLRRDVEAG 86 Query: 80 HVIPLSVLHR 89 + + + Sbjct: 87 EPLLAADVAA 96 >gi|296156488|ref|ZP_06839326.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1] gi|295893087|gb|EFG72867.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1] Length = 269 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + S ++ VV + IN G+ + LK + ++++ I+ + G V + L Sbjct: 20 MVSQSSNATTKVVVAATDINLGQRIGPDFLKLTEWPSNSVPPGSFTDIQKLDGRVLKESL 79 Query: 77 LPDHVI 82 L + Sbjct: 80 LHGEPV 85 >gi|168187390|ref|ZP_02622025.1| sialic acid synthase [Clostridium botulinum C str. Eklund] gi|169294695|gb|EDS76828.1| sialic acid synthase [Clostridium botulinum C str. Eklund] Length = 352 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 V ++V S I GE++ E L + + + Y KD++G + D Sbjct: 289 MKVARKSIVASKNIKKGEIITEKHLDYKR-PGTGLAPKYY---KDIIGKRASIDIETDMQ 344 Query: 82 IPLSVLHR 89 I ++ R Sbjct: 345 ITFDLVER 352 >gi|320533999|ref|ZP_08034557.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133787|gb|EFW26177.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 235 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 8/110 (7%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 + I AG+V+++ L V++ A I VVG R + ++ S L Sbjct: 73 LAAKDTIKAGQVIDKEDLVSASVSSDLTTLVRADQIDQVVGRTARVEISKGQLLDTSQLA 132 Query: 89 -RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137 P V + G GD + V +I + ++ Sbjct: 133 TDPVPGGDLQVVGVSANAGRFPAGGL-------QPGDKVDVVDIGSQNVI 175 >gi|257790303|ref|YP_003180909.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] gi|325830168|ref|ZP_08163625.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1] gi|257474200|gb|ACV54520.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] gi|325487635|gb|EGC90073.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1] Length = 215 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 20/61 (32%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V I AGE ++ S ++ + S DVVG +L V+ Sbjct: 52 VAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSDDVVGKKASSTILAGEVLSERRFRD 111 Query: 90 P 90 Sbjct: 112 A 112 >gi|218290612|ref|ZP_03494714.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239396|gb|EED06593.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 267 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 9/124 (7%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 + +V+ + + A V + + GEV+ + +V + + V Sbjct: 28 LVTAFVIERVATHKVPMAMAFVAAHDLTVGEVIGPKDVTRTKVPVATLPPGAMTVS--PV 85 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG----NMTISTAGIALSDASIGD 124 G + + V+ L R ++ V + +T+ST + ++D S+G Sbjct: 86 GKMVTSPVYQGQVLVGGDLGRMGGVN---GVMRLYGTQTRAYPLTLSTQSVPMNDVSVGQ 142 Query: 125 VIAV 128 + V Sbjct: 143 AVDV 146 >gi|307726374|ref|YP_003909587.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003] gi|307586899|gb|ADN60296.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003] Length = 278 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V + ++ G+ LN + ++ + +++ K + G V R L P Sbjct: 33 SSAVTPVAVVTAEVSLGQPLNANMIRTVNWPTASVPPGAFKDPKALDGRVVRTSLEPGEP 92 Query: 82 IPLSVLHRP 90 + S L Sbjct: 93 VIESKLAPQ 101 >gi|206891038|ref|YP_002248324.1| CMP-NeuNAc synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742976|gb|ACI22033.1| CMP-NeuNAc synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 345 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V I AGE++ E + + + I + + ++G +R + + ++ Sbjct: 284 RSIVSLSDIKAGEIITEDMI-WSKRPGTGIPSYF---MDKIIGAKAKRFIPANTLLSWDD 339 Query: 87 LH 88 + Sbjct: 340 IE 341 >gi|289451029|gb|ADC93945.1| spore coat polysaccharide biosynthesis protein E [Leptospira interrogans serovar Autumnalis] gi|289451113|gb|ADC94028.1| N-acetyl neuramic acid synthetase NeuB [Leptospira interrogans serovar Grippotyphosa] Length = 331 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + ++I VV V + E ++ +L + N Y +++ V + RR + + Sbjct: 268 YRNMIRRHVVSKVDLKKDEKIDSGKLVLKRSAIEN----YIDNLEFVYEKIARRDIRANT 323 Query: 81 VIPLSVL 87 I + Sbjct: 324 PITKEDI 330 >gi|241203192|ref|YP_002974288.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857082|gb|ACS54749.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 342 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G +++ I GE L +L I V+G +R + I Sbjct: 282 LGKSIIAYSDIRVGEELTLDKLSGRIFNTHYIP---VRESNKVLGKTVKRDIAKGEPIQY 338 Query: 85 SVLH 88 S Sbjct: 339 SDFG 342 >gi|317122047|ref|YP_004102050.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM 12885] gi|315592027|gb|ADU51323.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM 12885] Length = 236 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 9/93 (9%) Query: 6 FLLFFSLYVLSLDSLFASVIG---------HAVVPSVVINAGEVLNESRLKEMQVTNSNI 56 + L V L + + V VV + + A L L QV + Sbjct: 12 LPVLVGLAVTVLVAFYIRVPAGQAESGPRVPVVVATRPVPAQTRLEADMLAVRQVPADLV 71 Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 ++D VG VT+ L + S L R Sbjct: 72 GRGAIGRLEDAVGKVTKVPLAEGEFVLASKLAR 104 >gi|148656324|ref|YP_001276529.1| SAF domain-containing protein [Roseiflexus sp. RS-1] gi|148568434|gb|ABQ90579.1| SAF domain [Roseiflexus sp. RS-1] Length = 304 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 28/83 (33%), Gaps = 1/83 (1%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66 + SL + + + V+ + I + L +++ ++ + Sbjct: 30 IMTSLAAAAYGYIESRRTERVVIAARDIPYAAQITVDDLAVIELPLHRPVQVAGITDPQA 89 Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89 V+G R + + ++ +L Sbjct: 90 VIGQYATRQIGMNDLLNPGMLAA 112 >gi|299067806|emb|CBJ39017.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia solanacearum CMR15] Length = 295 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S V +V +N G+ L+ ++ + +++ + G VTR L P + Sbjct: 41 SGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPV 100 Query: 83 PLSVLHR 89 S L Sbjct: 101 LESKLTP 107 >gi|323139438|ref|ZP_08074487.1| multi-sensor signal transduction histidine kinase [Methylocystis sp. ATCC 49242] gi|322395309|gb|EFX97861.1| multi-sensor signal transduction histidine kinase [Methylocystis sp. ATCC 49242] Length = 776 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 44/111 (39%), Gaps = 5/111 (4%) Query: 42 NESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101 + LK + +I +++ T + L ++ + L + +++RG + Sbjct: 568 TATYLKVARRLLERPPQEAGTNIVELIDKATIQTLRAGKIV--NSLRQ--LVARGEPDKT 623 Query: 102 ILTQGNMTISTAGIALSDASIGD-VIAVKNIDTGVMVSGSVVDTGTVRVVV 151 +++ + ++T L+D + D I ++ + V V V++ Sbjct: 624 LVSVHELILNTYDSMLADGAKTDAQIRLERNASRDDVVADRAQLQQVLVIL 674 >gi|315655932|ref|ZP_07908830.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC 51333] gi|315489996|gb|EFU79623.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC 51333] Length = 187 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 +V + AG + ++ + G Y + G V + + +IP + L Sbjct: 22 LVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGELQEGSVVVQTIAGGQLIPKASLS 81 Query: 89 R 89 + Sbjct: 82 Q 82 >gi|119961944|ref|YP_948401.1| hypothetical protein AAur_2686 [Arthrobacter aurescens TC1] gi|119948803|gb|ABM07714.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length = 214 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV-GLVTRRVLLPDH 80 A I G+V+ E+ L ++V ++ +Y V G V + + + Sbjct: 43 ADRTTQVYTAREDIAVGQVVTEADLSIVKVRLDDVESSYVTVENGVAEGKVALQRVAKNQ 102 Query: 81 VIPLSVLHRPYVISR 95 ++P L P ++R Sbjct: 103 LVPQESLGVPDALNR 117 >gi|163856620|ref|YP_001630918.1| N-acetylneuraminate synthase [Bordetella petrii DSM 12804] gi|163260348|emb|CAP42650.1| N-acetylneuraminate synthase [Bordetella petrii] Length = 351 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 10/60 (16%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNY---AHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 + AGE + E ++ ++R + + DVVG R + + + L Sbjct: 299 KPLQAGETITEDAVR-------SVRPGFGLPPKQLDDVVGRKVGRDIAANTPVRAQDLRD 351 >gi|228924281|ref|ZP_04087535.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835388|gb|EEM80775.1| Spore coat polysaccharide biosynthesis protein spsF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 331 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + I GE++ +++ N ++++ + L + V+ Sbjct: 17 VTKIDIKKGEIITANKIAMELDVVENALNQL--EAEELLPQIALYNLSAGAPLSKEVIEP 74 Query: 90 PYVI 93 P V+ Sbjct: 75 PKVV 78 >gi|256372054|ref|YP_003109878.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008638|gb|ACU54205.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 237 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 24/64 (37%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + I AG + + L +T ++ D VG + P ++ S++ Sbjct: 61 GVVVTRPIPAGATIERADLGLASITVPQAVRATLLAVDDAVGRTAAVTIAPGTLLERSMV 120 Query: 88 HRPY 91 P Sbjct: 121 LGPR 124 >gi|220913319|ref|YP_002488628.1| SAF domain protein [Arthrobacter chlorophenolicus A6] gi|219860197|gb|ACL40539.1| SAF domain protein [Arthrobacter chlorophenolicus A6] Length = 242 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 23/104 (22%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 A+ + + AG + S L ++V + + G L ++ Sbjct: 69 TALSAARDLPAGTAVTASDLVPVRVPPGLLSEGVLSGQAEAAGKQLATPLRKGQLVTDVQ 128 Query: 87 LHRP-----------------------YVISRGAKVRIILTQGN 107 L P ++S G V ++LT GN Sbjct: 129 LLGPGLLTGTPPGSAAVPLRMADASSIQLVSPGQLVNVVLTSGN 172 >gi|46580523|ref|YP_011331.1| hypothetical protein DVU2118 [Desulfovibrio vulgaris str. Hildenborough] gi|46449942|gb|AAS96591.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234262|gb|ADP87116.1| Flp pilus assembly protein CpaB [Desulfovibrio vulgaris RCH1] Length = 272 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV +V + G + +LK +++ K +VG V + VI + L Sbjct: 45 VVAAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104 Query: 89 RPYVISRGAKVRI 101 S G I Sbjct: 105 PADATSGGVSTMI 117 >gi|146296447|ref|YP_001180218.1| hypothetical protein Csac_1426 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410023|gb|ABP67027.1| hypothetical protein Csac_1426 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 194 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 3/92 (3%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV---VPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 ++ + ++ V L +F S + + V I+ GE++++S + +++ + + Sbjct: 6 IKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNFIHQGEIIDDSDITFLKLPSYALPQGV 65 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92 + +VG + V+ YV Sbjct: 66 IKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYV 97 >gi|296329249|ref|ZP_06871750.1| N-acylneuraminate-9-phosphate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153605|gb|EFG94422.1| N-acylneuraminate-9-phosphate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 508 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 I GEV+ E+ +K ++ +N Y +++G R L + + Sbjct: 454 IKKGEVITENNIKSVRPSNGISPKFYY----EIIGKKVNRDLEFGTPLLFEYIEE 504 >gi|154250525|ref|YP_001411349.1| SAF domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154154475|gb|ABS61692.1| SAF domain protein [Parvibaculum lavamentivorans DS-1] Length = 317 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79 L A +V + + G+ ++E+ L ++ G++A + +G V + Sbjct: 69 LAAENAVTVLVAARDVVRGQRISEADLGLRRMEGPAPSGSFA-DAQSAIGRVATDDIRSS 127 Query: 80 HVIPLSVLHRPYV 92 +I L Sbjct: 128 QIIFQQALSSEPA 140 >gi|328954938|ref|YP_004372271.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2] gi|328455262|gb|AEB06456.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2] Length = 223 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 V + I GE L+E+ ++ + S + A S++DV G + V+ Sbjct: 52 VATRTIEPGETLDETNVQVKEWVASLLPQGAATSLRDVAGTRVTSRVPSHAVLCPVYTE 110 >gi|119961714|ref|YP_948564.1| Flp pilus assembly protein [Arthrobacter aurescens TC1] gi|119948573|gb|ABM07484.1| putative Flp pilus assembly protein CpaB family [Arthrobacter aurescens TC1] Length = 269 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 5 RFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59 R + L V + ++ VV + + G L ES L + V Sbjct: 70 RLAVALLLCVAAGIAVHQLTPASEQRVSVVVAARDLPTGTSLTESDLTSVGVPPDLALSG 129 Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKV 99 +SI +VG L + S L P +++ GA V Sbjct: 130 ALNSIGTLVGRQLASPLGKGQIPTESSLLGPGLLT-GAPV 168 >gi|37680845|ref|NP_935454.1| Flp pilus assembly protein CpaB [Vibrio vulnificus YJ016] gi|37199594|dbj|BAC95425.1| Flp pilus assembly protein CpaB [Vibrio vulnificus YJ016] Length = 248 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 + ++ I AG V+ L + S + K++VG + + P +I L Sbjct: 48 IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107 Query: 90 P 90 P Sbjct: 108 P 108 >gi|296134297|ref|YP_003641544.1| Flp pilus assembly protein CpaB [Thermincola sp. JR] gi|296032875|gb|ADG83643.1| Flp pilus assembly protein CpaB [Thermincola potens JR] Length = 257 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 6/79 (7%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD-HVIPLS 85 VV +V I A V+ + V + N + V+G V+ + V+ Sbjct: 39 KVVVANVNIPARTVITGDMVSVKDVPEEFVHPNAVLDEEQVIGFVSGSDISAGEQVLREK 98 Query: 86 VLHRPYVISRGAKVRIILT 104 +L G V + Sbjct: 99 ILR-----KEGNPVSLSYQ 112 >gi|45187616|ref|NP_983839.1| ADL257Cp [Ashbya gossypii ATCC 10895] gi|44982354|gb|AAS51663.1| ADL257Cp [Ashbya gossypii ATCC 10895] Length = 410 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 13/80 (16%) Query: 77 LPDH-----VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI-ALSDASIGDVIAVKN 130 P V ++ P + G + +T G AL GD + + Sbjct: 240 QPGQIPGDVVFVVNEQEHPRFVRNGDNLHYEAEIDLLTAIAGGQFALEH-VSGDWLKID- 297 Query: 131 IDTGVMVSGSVVDTGTVRVV 150 +V G V+ G V+V+ Sbjct: 298 -----IVPGEVIAPGMVKVI 312 >gi|320155488|ref|YP_004187867.1| flp pilus assembly protein RcpC/CpaB [Vibrio vulnificus MO6-24/O] gi|319930800|gb|ADV85664.1| flp pilus assembly protein RcpC/CpaB [Vibrio vulnificus MO6-24/O] Length = 248 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 + ++ I AG V+ L + S + K++VG + + P +I L Sbjct: 48 IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107 Query: 90 P 90 P Sbjct: 108 P 108 >gi|312126639|ref|YP_003991513.1| SAF domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311776658|gb|ADQ06144.1| SAF domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 208 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 L F+ Y L ++ +V I AG + +L +V + A + K + Sbjct: 19 LAFAEYYLLTNTANKPQYQLIIVAKQDIPAGAQITLDKLSVARVDV-RTPVHAATTRKQI 77 Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89 +G + I L Sbjct: 78 LGRYALYDIKAGEPIIPEHLTD 99 >gi|27365105|ref|NP_760633.1| Flp pilus assembly protein CpaB [Vibrio vulnificus CMCP6] gi|27361251|gb|AAO10160.1| Flp pilus assembly protein CpaB [Vibrio vulnificus CMCP6] Length = 248 Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 + ++ I AG V+ L + S + K++VG + + P +I L Sbjct: 48 IAAIEIPAGSVIEPQHLTTKLLEKSWRELSQYTDPKELVGQIVAGAIYPGEIIIEQRLTV 107 Query: 90 P 90 P Sbjct: 108 P 108 >gi|261885916|ref|ZP_06009955.1| sialic acid synthase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 231 Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 I GE+L ++ ++ N Y +++G ++ L + + L + Sbjct: 182 IKKGEILTPQNIRSIRPNNGLHAKFY----DEILGKTAKKDLEFGYPLSLDDIR 231 >gi|170049890|ref|XP_001858599.1| vacuolar protein sorting-associated protein [Culex quinquefasciatus] gi|167871568|gb|EDS34951.1| vacuolar protein sorting-associated protein [Culex quinquefasciatus] Length = 3259 Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 82 IPLSVLHRPYVISR--GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139 I + PY++ G ++I + I + L ++IA++ + + S Sbjct: 1892 IVKTETQAPYMVQNDTGQDIKINFVGSDFVIQAS--HLQSGREDELIAIEQTGSQEVTSC 1949 Query: 140 SVVDTGT 146 V+ G Sbjct: 1950 IVMPNGR 1956 >gi|313902402|ref|ZP_07835805.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM 13965] gi|313467333|gb|EFR62844.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM 13965] Length = 236 Score = 35.6 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 V L+ F + V + ++ + VV + + A L L QV + Sbjct: 19 AVTILVAFYVRVPAGEAGKEPRV-PVVVATRPVPAQTPLQADMLAVRQVPADVVGRGAVG 77 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHR 89 I++ VG VT+ L + S L R Sbjct: 78 RIEEAVGKVTKVPLAEGEFVLTSKLAR 104 >gi|168704728|ref|ZP_02737005.1| chaperone protein HscC [Gemmata obscuriglobus UQM 2246] Length = 580 Score = 35.6 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRV 75 LD+ + + A +P + L ++ E+ + R + +++G RR Sbjct: 276 LDAWVSPTLARAELPVRRVLGDARLTRDQIDEVILVGGATRMPLVVSRVTELLGKEPRRR 335 Query: 76 LLPDHVIPLSVLHRPYVISRGAKV 99 L PD V+ L + ++ R A V Sbjct: 336 LNPDEVVALGAAVQAGLVGRAAAV 359 >gi|260776716|ref|ZP_05885611.1| flp pilus assembly protein RcpC/CpaB [Vibrio coralliilyticus ATCC BAA-450] gi|260607939|gb|EEX34204.1| flp pilus assembly protein RcpC/CpaB [Vibrio coralliilyticus ATCC BAA-450] Length = 247 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + I AG V+ E L + S ++++G V + P +I + L P Sbjct: 49 AAQEIPAGSVIGEQHLTSKLLEKDWRDEFQFTSSEELIGQVVATSIFPGEIINQNRLTVP 108 >gi|322419945|ref|YP_004199168.1| Flp pilus assembly protein CpaB [Geobacter sp. M18] gi|320126332|gb|ADW13892.1| Flp pilus assembly protein CpaB [Geobacter sp. M18] Length = 308 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%) Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 +D A VV + I G ++E +LK +I A +K +VG V R + Sbjct: 33 MDMTKAVQPQTLVVAAADIPIGGTISEPQLKTTSWPKDSIPPGSAADVKSLVGRVAIRPI 92 Query: 77 LPDHVIPLSVLHR 89 + L Sbjct: 93 SNGDAVTEQKLKP 105 >gi|17545375|ref|NP_518777.1| pilus assembly transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427667|emb|CAD14186.1| probable pilus assembly cpab transmembrane protein [Ralstonia solanacearum GMI1000] Length = 288 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S V +V +N G+ L+ ++ + +++ + G VTR L P + Sbjct: 34 SGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPV 93 Query: 83 PLSVLHR 89 S L Sbjct: 94 LESKLTP 100 >gi|33593024|ref|NP_880668.1| hypothetical protein BP1995 [Bordetella pertussis Tohama I] gi|33563399|emb|CAE42275.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332382436|gb|AEE67283.1| hypothetical protein BPTD_1965 [Bordetella pertussis CS] Length = 313 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I AG+ L LK + G + ++G + R+ + + + Sbjct: 50 PVVVAGKPIAAGDRLAADLLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107 Query: 87 LHR 89 L R Sbjct: 108 LAR 110 >gi|167747677|ref|ZP_02419804.1| hypothetical protein ANACAC_02398 [Anaerostipes caccae DSM 14662] gi|239625012|ref|ZP_04668043.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|167653039|gb|EDR97168.1| hypothetical protein ANACAC_02398 [Anaerostipes caccae DSM 14662] gi|239521398|gb|EEQ61264.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 263 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+ + ++ ++V + N+ + ++V+G + P I S + Sbjct: 46 IKIGDKITGDMVRTVEVGSLNLPSEVMKNKENVIGKYASADMAPGDYIINSKVADEPAAE 105 Query: 95 RGAKVRIILTQGNMTISTAGIALS-DASI--GDVIAV 128 + + +++S A + GD+++V Sbjct: 106 NAYLYNLSGEKQAISVSVKSFATGLSGKLKSGDIVSV 142 >gi|197117447|ref|YP_002137874.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem] gi|197086807|gb|ACH38078.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem] Length = 291 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 30/82 (36%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 L +S + S A+ VV +V I G + ++LK +I A I+ V Sbjct: 24 LAYSFLQQEVKSAKAAQPQRIVVAAVDIPIGTAITPAQLKVASWPKDSIPPGSARGIEAV 83 Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89 V R + + + L Sbjct: 84 ANRVAIRPITGGDAVTEAKLKP 105 >gi|145297253|ref|YP_001140094.1| sialic acid synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850025|gb|ABO88346.1| sialic acid synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 348 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 I AGEVL + +K ++ +Y ++G R + + + Sbjct: 296 IAAGEVLTAAHIKSVRPALGLPPADY----DRLIGKRVSRDMAANQPLS 340 >gi|307265848|ref|ZP_07547398.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1] gi|306919123|gb|EFN49347.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1] Length = 266 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 18/112 (16%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + + G+ L S G + + GL + ++ P V+ + Sbjct: 28 ATYTVKPGDTL---------WGISQKYGTTYTKLMSLNGLQST-IIYPGQVLQVPGSDNT 77 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA------VKNIDTGVM 136 YV+ +G + +I + +T+ A + D+I + N + Sbjct: 78 YVVQKGDSLYLIALKYGITVDMLKSA--NGYKSDIIYPGQVFIIPNASSNRT 127 >gi|226310155|ref|YP_002770049.1| hypothetical protein BBR47_05680 [Brevibacillus brevis NBRC 100599] gi|226093103|dbj|BAH41545.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 279 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 10/128 (7%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 +A +PS + + +L ++ +Y + VT L +I + Sbjct: 46 ANADIPSRAL-----IQPDQLTVREIPKKYADDSYVIDKASLKNQVTIVPLSKGDIITKN 100 Query: 86 VLHRPYVIS-RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144 ++ V+ ++ + + N+ AL D+I + + +G V+ + Sbjct: 101 IMKPANVVRDENNRLVTVFSSNNIVFDQELEALDRV---DII-ISHEVSGKPVTEVFMKD 156 Query: 145 GTVRVVVK 152 V +V K Sbjct: 157 VPVAMVAK 164 >gi|258512891|ref|YP_003186325.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479617|gb|ACV59936.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 677 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 113 AGIALSDA-SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 G+A GD + V+N V+ V G RVV Sbjct: 579 LGVAAERGIQDGDWVRVRNKKASVIARARVQAEGHPRVV 617 >gi|242309883|ref|ZP_04809038.1| sialic acid synthase [Helicobacter pullorum MIT 98-5489] gi|239523884|gb|EEQ63750.1| sialic acid synthase [Helicobacter pullorum MIT 98-5489] Length = 336 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63 V LL Y LS S V ++ I GE + E++++ +IR Y Sbjct: 256 VEELLGVESYELSQKSKEGRVFMRSLFVVEDIAKGERIKENQIR-------SIRPGYGIP 308 Query: 64 IK---DVVGLVTRRVLLPDHVIPLSVLH 88 K VVG ++ L + Sbjct: 309 PKMKYQVVGKKAKKALKRGEPLSFGDWE 336 >gi|148976663|ref|ZP_01813350.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3] gi|145964014|gb|EDK29272.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3] Length = 249 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 23/64 (35%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV S I AG V+ E L + I N ++++G V + V+ Sbjct: 45 PVVVASQEIEAGTVIEEQFLTTKLMEVDWINENNYSDKEELIGKVVANTIYAGEVLHKLR 104 Query: 87 LHRP 90 P Sbjct: 105 FTVP 108 >gi|33596968|ref|NP_884611.1| hypothetical protein BPP2375 [Bordetella parapertussis 12822] gi|33566419|emb|CAE37672.1| putative membrane protein [Bordetella parapertussis] Length = 313 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I AG+ L LK + G + ++G + R+ + + + Sbjct: 50 PVVVAGKPIAAGDRLAAELLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107 Query: 87 LHR 89 L R Sbjct: 108 LAR 110 >gi|94264703|ref|ZP_01288484.1| N-acylneuraminate-9-phosphate synthase [delta proteobacterium MLMS-1] gi|93454869|gb|EAT05116.1| N-acylneuraminate-9-phosphate synthase [delta proteobacterium MLMS-1] Length = 749 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + + GE++ ++ S +G + ++++VG V R Sbjct: 402 LAKSLVINQDLTQGEMIQRDMIEVK----SPGQGLQPNRLEELVGKVAVRDFRAGDFFFE 457 Query: 85 SVLHR 89 S + Sbjct: 458 SDIKP 462 >gi|25027510|ref|NP_737564.1| hypothetical protein CE0954 [Corynebacterium efficiens YS-314] gi|259507082|ref|ZP_05749982.1| secreted protein [Corynebacterium efficiens YS-314] gi|23492792|dbj|BAC17764.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165360|gb|EEW49914.1| secreted protein [Corynebacterium efficiens YS-314] Length = 215 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 4 VRFLLFFSLYVLSLDSLFASVIG---HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 +R L +L +++ S+I VV S I AG + + L+ ++ + Sbjct: 18 LRRALAATLLIVAGFLFAGSLISTDPRVVVFSRDIPAGTEITDQDLELRRIPADLVPDQV 77 Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 ++ +G +T + + ++S Sbjct: 78 IRIPEEALGRITASSVTAGEWVTAPRFVGTELVS 111 >gi|146297616|ref|YP_001181387.1| SAF domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411192|gb|ABP68196.1| SAF domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 219 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS--V 86 +V S+ I GE + + +L ++V A + +V+ + I + Sbjct: 43 IVASMDIKKGEKITQDKLALVRVAAPT-PIPAAKNPVEVLNKYVLYDIKRGEPIIPAKLT 101 Query: 87 LHRPYVISRGAKVRII 102 + P +S+G +I Sbjct: 102 VKPPIDVSKGQYSMLI 117 >gi|218290594|ref|ZP_03494696.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239378|gb|EED06575.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 261 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 3/80 (3%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 ++++ + A+ V + I + S + + + + + + VG Sbjct: 19 AVWLDWMVLERANATVQVPVAAQTIPPYTTITSSDITWKSIPRNALPSDLVTNP---VGR 75 Query: 71 VTRRVLLPDHVIPLSVLHRP 90 +T + I S L Sbjct: 76 LTVLGVAAGDPIESSELAAQ 95 >gi|111022595|ref|YP_705567.1| hypothetical protein RHA1_ro05629 [Rhodococcus jostii RHA1] gi|110822125|gb|ABG97409.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 237 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + + G VL ++ ++ + + + ++ DV G + + Sbjct: 70 VVVAARDLQPGVVLTDADVELVDLEAGTLPDGAVTALADVDGRTLAGPTRAGEALTDVRV 129 Query: 88 HRPYV 92 P + Sbjct: 130 LGPRL 134 >gi|326331487|ref|ZP_08197777.1| putative membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950743|gb|EGD42793.1| putative membrane protein [Nocardioidaceae bacterium Broad-1] Length = 224 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 7/105 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGLVTRRVLLPDHVIP 83 +V I G ++ +K +Q++ S DV+G + ++ Sbjct: 60 TQDVLVARHTIERGSLIEADDIKRIQISADPALEALPGSSYGDVIGKKAGLDIAAGALLT 119 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 + G V + ++T+ + GD + V Sbjct: 120 EEATTSSPMPPDGMSVV------GLALATSHSPAVNLRTGDRVRV 158 >gi|320107043|ref|YP_004182633.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4] gi|319925564|gb|ADV82639.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4] Length = 176 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-----GVMVSGSVVDTG 145 + G V ++ QG I GI+ ++ IGD I ++ I + + + SV G Sbjct: 112 AVHAGQTVDLLYEQGPAKIHLRGISEANGYIGDRIVLRPIASLGSPPELRLHASVTAEG 170 >gi|33600810|ref|NP_888370.1| hypothetical protein BB1825 [Bordetella bronchiseptica RB50] gi|33568410|emb|CAE32322.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 313 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV I AG+ L LK + G + ++G + R+ + + + Sbjct: 50 PVVVAGKPIAAGDRLAADLLKIERWPVQPANG--YAESEALLGQMVRQDIPAGEPVTAPM 107 Query: 87 LHR 89 L R Sbjct: 108 LAR 110 >gi|103486618|ref|YP_616179.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256] gi|98976695|gb|ABF52846.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256] Length = 345 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 13/128 (10%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIPL 84 +V + + G ++ + + Y + +VG V R + + Sbjct: 49 LVATRQLPVGTIVGPDSFRFQPWPKDLVENAYFVKEKTDVNTLVGTVVRHPITAGQPLTQ 108 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI-----GDVIAVKNIDTGVMVSG 139 L P RG M T ++ GD + V T + G Sbjct: 109 GALVHPN--DRGFLAA--ALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIEVEEG 164 Query: 140 SVVDTGTV 147 S + Sbjct: 165 STYPDDQI 172 >gi|261837628|gb|ACX97394.1| sialic acid synthase [Helicobacter pylori 51] Length = 340 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 I GE L E+ +K ++ Y K+++G + L + + + RP Sbjct: 288 IQKGETLTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLSADGIERP 339 >gi|260204206|ref|ZP_05771697.1| hypothetical protein MtubK8_07852 [Mycobacterium tuberculosis K85] gi|289573628|ref|ZP_06453855.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289538059|gb|EFD42637.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length = 218 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 19/58 (32%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + G VL ++ + + + + + VVG V+ Sbjct: 54 AEVVVAAHDLRPGTVLTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111 >gi|195166110|ref|XP_002023878.1| GL27311 [Drosophila persimilis] gi|194106038|gb|EDW28081.1| GL27311 [Drosophila persimilis] Length = 372 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G ++V + + G L + L + + +VG + D I Sbjct: 311 LGKSIVAARTLRKGLKLQLTDLAIKVSEPNGLPAEAYFD---IVGKELTDTVYEDEPIAG 367 Query: 85 SVLH 88 +++ Sbjct: 368 NMVK 371 >gi|20559814|gb|AAM27589.1|AF498403_8 ORF_8; similar to NeuB family [Pseudomonas aeruginosa] Length = 361 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 VV + I AG ++ L + + G S+ ++VG ++R L + Sbjct: 304 QAARQQVVAARDIEAGMIITRDDLTTAR----SGHGLPPTSLWELVGSTSKRAFLAGETL 359 >gi|302038298|ref|YP_003798620.1| putative n-acetylneuraminate synthase [Candidatus Nitrospira defluvii] gi|300606362|emb|CBK42695.1| putative N-acetylneuraminate synthase [Candidatus Nitrospira defluvii] Length = 348 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV V I G V+ + + ++ + A +K V+G V + + D I Sbjct: 289 VVSEVAIPRGTVITPTMV-WVKRPSPGPGAVAAKDLKKVIGKVAKTDIPKDSQIR 342 >gi|168703131|ref|ZP_02735408.1| flp pilus assembly protein [Gemmata obscuriglobus UQM 2246] Length = 442 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 4/86 (4%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLK----EMQVTNSNIRGNYAHSIKDVV 68 ++ + S VV + + G +L + LK ++ + + +++V Sbjct: 21 FLTAQMSAKPIEQMEVVVAAKDLPVGTMLGKEDLKAAVKIVKRPKEGLPPTVVLNPEELV 80 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVIS 94 R + + VI L + VI+ Sbjct: 81 DKRLSRPIRAEEVINSQDLSKGGVIT 106 >gi|149911410|ref|ZP_01900028.1| Flp pilus assembly protein CpaB [Moritella sp. PE36] gi|149805518|gb|EDM65523.1| Flp pilus assembly protein CpaB [Moritella sp. PE36] Length = 264 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 23/53 (43%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 ++VI G ++ +K + S N ++ G++ + + D +I L Sbjct: 45 TMVIPIGTIIEAKHIKLKILPESMSPDNTVTDPDEIYGMIAKDTIYIDDIIRL 97 >gi|82617362|emb|CAI64274.1| NeuB family member [uncultured archaeon] gi|268323069|emb|CBH36657.1| conserved hypothetical protein, NeuB family [uncultured archaeon] Length = 360 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 ++V V I + L + + I + V+G TRR + D +I Sbjct: 303 RSIVAKVTIPEDTTIAADMLAFKR-PGTGISTKFV---DRVIGKKTRRRINEDEII 354 >gi|85707703|ref|ZP_01038769.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1] gi|85689237|gb|EAQ29240.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1] Length = 365 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 22/130 (16%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 +V + + AG ++ + ++ Y + ++G V R + + Sbjct: 45 KVLVANRALPAGTIITADAMGYQMWPEELVQDAYFIEGESDMSQLLGTVVRFPVTAGEPV 104 Query: 83 PLSVLHRPYVISRGAKVRIILTQG-NMTISTAGIALSDASI-----GDVIAVKNIDTGVM 136 L P G + + G M T ++ GD + V + Sbjct: 105 TQGSLVSP-----GDRGFLAAALGPGMRAVTVPVSAKTGVAGFVFPGDRVDV-------V 152 Query: 137 VSGSVVDTGT 146 ++ +V G Sbjct: 153 LTQTVSGEGR 162 >gi|317009864|gb|ADU80444.1| sialic acid synthase [Helicobacter pylori India7] Length = 340 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 I GE L E+ +K ++ Y K+++G + L + + + RP Sbjct: 288 IQKGEALTENNIKALRPNLGLHPKFY----KEILGQKASKFLKANTPLNADDIERP 339 >gi|229816461|ref|ZP_04446762.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM 13280] gi|229808003|gb|EEP43804.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM 13280] Length = 226 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + + V I G+ ++E +K ++ +S + + S+ D GLV + Sbjct: 43 YGGDVTRVCVALREIEPGDEISEGNVKVVEWVSSLMPEDALTSMGDASGLVATARIPAHT 102 Query: 81 VIPLSVL---HRPYVISRGAKVRIILTQ 105 + + R + RG + + Sbjct: 103 PLAKAHFLRDERVVQVPRGTVAISVASD 130 >gi|149927034|ref|ZP_01915292.1| Flp pilus assembly CpaB [Limnobacter sp. MED105] gi|149824255|gb|EDM83475.1| Flp pilus assembly CpaB [Limnobacter sp. MED105] Length = 321 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 5/102 (4%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV +V I G+ + LK + I DV+G + + Sbjct: 45 PVVVSTVEIQFGKPVTPEMLKVEKFAI--APSGAFTDIGDVIGKKPLFNIGKGLPVTNQY 102 Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 V A+VR + + +A + GD + V Sbjct: 103 FESGAV---AAEVREGYRAFALRLDENNVATAKIKAGDYVDV 141 >gi|156741391|ref|YP_001431520.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232719|gb|ABU57502.1| SAF domain protein [Roseiflexus castenholzii DSM 13941] Length = 298 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 23/66 (34%), Gaps = 1/66 (1%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 ++ + + G+ + L +++ I+ V+G R + + ++ Sbjct: 47 TERVIIAARDVPYGQQITIDDLAIIELPLHRPIQVAGITDPNIVIGQYATRQIGTNDLLN 106 Query: 84 LSVLHR 89 +L Sbjct: 107 PGMLSP 112 >gi|167574002|ref|ZP_02366876.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis C6786] Length = 282 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V ++ +N GE L ++L+ + +++ +K + G V R L Sbjct: 33 SSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSLARGEP 92 Query: 82 IPLSVLHR 89 + S L Sbjct: 93 VLGSKLAP 100 >gi|239617658|ref|YP_002940980.1| N-acylneuraminate-9-phosphate synthase [Kosmotoga olearia TBF 19.5.1] gi|239506489|gb|ACR79976.1| N-acylneuraminate-9-phosphate synthase [Kosmotoga olearia TBF 19.5.1] Length = 355 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++V I AG+++ E+ ++ + Y V+G R + D ++ Sbjct: 296 RSLVAKRFIPAGKIIEETDIEIKRPGTGVSPLLY----DKVIGSKATRDIGEDEILQFGD 351 Query: 87 LH 88 Sbjct: 352 FR 353 >gi|319945759|ref|ZP_08020010.1| adenine-specific methyltransferase [Streptococcus australis ATCC 700641] gi|319748119|gb|EFW00362.1| adenine-specific methyltransferase [Streptococcus australis ATCC 700641] Length = 321 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61 +C R L + L + L A+ + + V G+ + LKE V S++ Y Sbjct: 134 NCQRSLDYLGLEIDDLLIDLAASMAEVMKADVNFAQGDAIRPQVLKESDVIISDLPVGYY 193 Query: 62 HSIKDVV 68 D + Sbjct: 194 --PDDAI 198 >gi|218289538|ref|ZP_03493766.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240406|gb|EED07588.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 235 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V + A + + ++ ++V S + + + + ++G T + + + V+ Sbjct: 37 VYVARTQMPADTPIQATDVERIRVPKSEVSPDAITNAEGLIGAYTAQPVDQNQVLTALDT 96 Query: 88 HR-PYVISRGAK 98 P+ I+ G + Sbjct: 97 EPDPFTITPGTE 108 >gi|261420563|ref|YP_003254245.1| pseudaminic acid synthase [Geobacillus sp. Y412MC61] gi|319768232|ref|YP_004133733.1| pseudaminic acid synthase [Geobacillus sp. Y412MC52] gi|261377020|gb|ACX79763.1| pseudaminic acid synthase [Geobacillus sp. Y412MC61] gi|317113098|gb|ADU95590.1| pseudaminic acid synthase [Geobacillus sp. Y412MC52] Length = 351 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 4/51 (7%) Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + AGE L + ++ ++ + + Y ++G +R + + Sbjct: 300 RDMRAGETLTKENVRAIR-PGNGLPPKYF---DQLLGKTVKRDVKKGTPVT 346 >gi|218131533|ref|ZP_03460337.1| hypothetical protein BACEGG_03152 [Bacteroides eggerthii DSM 20697] gi|317474800|ref|ZP_07934074.1| NeuB family protein [Bacteroides eggerthii 1_2_48FAA] gi|217986465|gb|EEC52802.1| hypothetical protein BACEGG_03152 [Bacteroides eggerthii DSM 20697] gi|316909481|gb|EFV31161.1| NeuB family protein [Bacteroides eggerthii 1_2_48FAA] Length = 346 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 4/76 (5%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71 LY+ + + ++ + ++ G+++ E + S G VVG Sbjct: 274 LYIDPAVAAAKVKLERSIATNKALHPGDIIKEEDIHL----LSPGDGFKWADCDKVVGRQ 329 Query: 72 TRRVLLPDHVIPLSVL 87 R+ + + +I + Sbjct: 330 VRKEIPRNEIIYPDSI 345 >gi|189467418|ref|ZP_03016203.1| hypothetical protein BACINT_03806 [Bacteroides intestinalis DSM 17393] gi|189435682|gb|EDV04667.1| hypothetical protein BACINT_03806 [Bacteroides intestinalis DSM 17393] Length = 302 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIDGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 281 QTIRVENSD---IVAAKVINELKIK 302 >gi|188581530|ref|YP_001924975.1| ROK family protein [Methylobacterium populi BJ001] gi|179345028|gb|ACB80440.1| ROK family protein [Methylobacterium populi BJ001] Length = 305 Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 37 AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 AG L+ ++ RG+YA ++ + GLV + P +SR Sbjct: 18 AGIALDAEGTTRAEIRVPTPRGDYAGTLDAIAGLVATLERQAGTTGASVGVGMPGAVSR- 76 Query: 97 AKVRIILTQGNMTISTAGIALS-DASIGDVIAVKNIDTGVMVSGSVVDTG 145 +I ++ ++ A +G + V+N + VS +V G Sbjct: 77 -ATGLIKNANSVWLNGRPFPQDLAARLGRPVRVENDANCLAVSEAVDGAG 125 >gi|78358296|ref|YP_389745.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220701|gb|ABB40050.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 351 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74 ++D +ASV V I AG++L++ + + I A + V+G V +R Sbjct: 285 PTIDFAYASV-----VAIRDIRAGDILSKDNIWVKRPGTGEI---LARDYERVLGRVAKR 336 Query: 75 VLLPDHVIPLSVLH 88 L + + Sbjct: 337 PLQKNAQLAWDDFD 350 >gi|254478855|ref|ZP_05092220.1| NeuB family protein [Carboxydibrachium pacificum DSM 12653] gi|214035217|gb|EEB75926.1| NeuB family protein [Carboxydibrachium pacificum DSM 12653] Length = 347 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + ++V + I G ++NE+ L + + I + I ++G + +L D ++ Sbjct: 287 IARKSIVAATYIPKGSIINENMLTVKR-PGTGIPPKF---IDYLIGKKAKIDILKDTILD 342 Query: 84 LSVLH 88 LS++ Sbjct: 343 LSMIE 347 >gi|189189348|ref|XP_001931013.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972619|gb|EDU40118.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 508 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 11/94 (11%) Query: 20 LFASVIGHAVVPSVVI--NAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + +++P +I +G + + ++E + + + R LL Sbjct: 347 VTLQIYSESIMPIRLIVAESGSTMTDEEVREALENLPQ-------DLTQIYNQILERTLL 399 Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 P ++ V R I + ++++ Sbjct: 400 PGQAYRANIFKFVLVAKR--PTTIHEMREALSVT 431 >gi|284029612|ref|YP_003379543.1| SAF domain-containing protein [Kribbella flavida DSM 17836] gi|283808905|gb|ADB30744.1| SAF domain protein [Kribbella flavida DSM 17836] Length = 219 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%) Query: 31 PSVVINAGEVLNESRLKEMQV--TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + AG L L ++V T+S G Y + D+ GLV R + +P Sbjct: 60 AERDLPAGTKLTSDDLTTVRVRFTSSEAAGQYVAADADLKGLVMSRAVKAGEFVPRRA 117 >gi|167566933|ref|ZP_02359849.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis EO147] Length = 274 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S + V ++ +N GE L ++L+ + +++ +K + G V R L Sbjct: 25 SSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSLARGEP 84 Query: 82 IPLSVLHR 89 + S L Sbjct: 85 VLGSKLAP 92 >gi|254705714|ref|ZP_05167542.1| UxaA family hydrolase [Brucella pinnipedialis M163/99/10] gi|261313134|ref|ZP_05952331.1| galactarate dehydratase [Brucella pinnipedialis M163/99/10] gi|261302160|gb|EEY05657.1| galactarate dehydratase [Brucella pinnipedialis M163/99/10] Length = 514 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|254695831|ref|ZP_05157659.1| hydrolase, UxaA family protein [Brucella abortus bv. 3 str. Tulya] gi|261216252|ref|ZP_05930533.1| galactarate dehydratase [Brucella abortus bv. 3 str. Tulya] gi|260917859|gb|EEX84720.1| galactarate dehydratase [Brucella abortus bv. 3 str. Tulya] Length = 514 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|225629275|ref|ZP_03787308.1| UxaA family hydrolase [Brucella ceti str. Cudo] gi|254710946|ref|ZP_05172757.1| hydrolase, UxaA family protein [Brucella pinnipedialis B2/94] gi|254712580|ref|ZP_05174391.1| hydrolase, UxaA family protein [Brucella ceti M644/93/1] gi|254715653|ref|ZP_05177464.1| hydrolase, UxaA family protein [Brucella ceti M13/05/1] gi|256029329|ref|ZP_05442943.1| hydrolase, UxaA family protein [Brucella pinnipedialis M292/94/1] gi|256157522|ref|ZP_05455440.1| hydrolase, UxaA family protein [Brucella ceti M490/95/1] gi|256253501|ref|ZP_05459037.1| hydrolase, UxaA family protein [Brucella ceti B1/94] gi|260167581|ref|ZP_05754392.1| hydrolase, UxaA family protein [Brucella sp. F5/99] gi|261217402|ref|ZP_05931683.1| galactarate dehydratase [Brucella ceti M13/05/1] gi|261220629|ref|ZP_05934910.1| galactarate dehydratase [Brucella ceti B1/94] gi|261318527|ref|ZP_05957724.1| galactarate dehydratase [Brucella pinnipedialis B2/94] gi|261320275|ref|ZP_05959472.1| galactarate dehydratase [Brucella ceti M644/93/1] gi|261757003|ref|ZP_06000712.1| hydrolase [Brucella sp. F5/99] gi|265986328|ref|ZP_06098885.1| galactarate dehydratase [Brucella pinnipedialis M292/94/1] gi|265996022|ref|ZP_06108579.1| galactarate dehydratase [Brucella ceti M490/95/1] gi|225615771|gb|EEH12820.1| UxaA family hydrolase [Brucella ceti str. Cudo] gi|260919213|gb|EEX85866.1| galactarate dehydratase [Brucella ceti B1/94] gi|260922491|gb|EEX89059.1| galactarate dehydratase [Brucella ceti M13/05/1] gi|261292965|gb|EEX96461.1| galactarate dehydratase [Brucella ceti M644/93/1] gi|261297750|gb|EEY01247.1| galactarate dehydratase [Brucella pinnipedialis B2/94] gi|261736987|gb|EEY24983.1| hydrolase [Brucella sp. F5/99] gi|262550319|gb|EEZ06480.1| galactarate dehydratase [Brucella ceti M490/95/1] gi|264658525|gb|EEZ28786.1| galactarate dehydratase [Brucella pinnipedialis M292/94/1] Length = 514 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|157151192|ref|YP_001450109.1| pyruvate phosphate dikinase [Streptococcus gordonii str. Challis substr. CH1] gi|157075986|gb|ABV10669.1| pyruvate, phosphate dikinase [Streptococcus gordonii str. Challis substr. CH1] Length = 873 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121 S +D+ G+V + ++ + V++RG + G ++I LS S Sbjct: 428 TSPEDIEGMVVSQAIVTSQ---GGMTSHAAVVARGMGTCCVAGCGELSIREESKTLSCGS 484 Query: 122 I----GDVIAVKNIDTGVMVSGSV 141 + GD+I+V + +G + SG + Sbjct: 485 LTLTEGDIISV-DGSSGCIYSGEI 507 >gi|50119733|ref|YP_048900.1| hypothetical protein ECA0788 [Pectobacterium atrosepticum SCRI1043] gi|49610259|emb|CAG73702.1| putative exported protein [Pectobacterium atrosepticum SCRI1043] Length = 314 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 15/111 (13%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD----VVGLVTRRVLLPDHVIP 83 +V + ++ G+ ++ + L+ + R KD ++G R + + Sbjct: 47 VLVAAKALHPGDFIDSASLRWDETDKPVSRTFNFIRGKDSQSLLLGATLRETVAEGTPLT 106 Query: 84 LSVLHRPYVISRGAK--VRIILTQG--NMTISTAGIALSDA--SIGDVIAV 128 + ++ V +L +G +++ T+ IA + S GD + V Sbjct: 107 SN-----VLVKPNEPGFVAAVLRKGMRAISVPTSAIASNAGLVSAGDRVDV 152 >gi|126437236|ref|YP_001072927.1| SAF domain-containing protein [Mycobacterium sp. JLS] gi|126237036|gb|ABO00437.1| SAF domain [Mycobacterium sp. JLS] Length = 218 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 13/103 (12%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV + + G L ES ++ + + + A V+G+ V+ Sbjct: 53 DVVVAATDLTPGMDLAESDVRVERRPLTTVPDGAAKDPTAVIGMTVAGPTRRGEVLTDLR 112 Query: 87 LHRPYVIS--RGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127 L P + G RI+ Q L+D ++ D++ Sbjct: 113 LLGPRIAEAAAGPDARIVSLQ-----------LADGALVDLVR 144 >gi|167040069|ref|YP_001663054.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X514] gi|256752689|ref|ZP_05493539.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1] gi|300914153|ref|ZP_07131469.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561] gi|307724611|ref|YP_003904362.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513] gi|166854309|gb|ABY92718.1| cell wall hydrolase, SleB [Thermoanaerobacter sp. X514] gi|256748408|gb|EEU61462.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1] gi|300889088|gb|EFK84234.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561] gi|307581672|gb|ADN55071.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513] Length = 267 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 25/131 (19%) Query: 19 SLFASVIGHAVV------PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 L ASVIG + + + G+ L S G + + GL + Sbjct: 10 PLIASVIGGLFIFQSIFAATYTVKPGDTL---------WGISQKYGTTYTKLMSLNGLQS 60 Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI---AV- 128 V+ P V+ + YV+ +G + +I + +T+ A + D+I V Sbjct: 61 T-VIYPGQVLQVPGSDNTYVVQKGDSLYLIALKYGITVDMLKSA--NGYKSDIIYPGQVF 117 Query: 129 ---KNIDTGVM 136 ++ + Sbjct: 118 IIPRDTSSNRT 128 >gi|189234957|ref|XP_973182.2| PREDICTED: similar to CG17754 CG17754-PC [Tribolium castaneum] Length = 886 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 14/121 (11%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G ++V + + G++L +K I + KDV+G + V+ D I Sbjct: 290 LGKSLVAATTLRKGDILQHENIKIKVAEPKGIDASLL---KDVIGKHVKGVINEDESILQ 346 Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA----SIGDVIAVKNIDTGVMVSGS 140 L + ++ + G ++GDV G ++ Sbjct: 347 ENLDNNGKKVQAHRLVLSAASEYFAAMFTGNLRESGESEITLGDV-------NGDVLQAV 399 Query: 141 V 141 V Sbjct: 400 V 400 >gi|78357402|ref|YP_388851.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219807|gb|ABB39156.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 272 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 7/60 (11%), Positives = 17/60 (28%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V + + G + ++ + S ++ G V + I + L Sbjct: 46 VAAADMTKGTRIRAEQITMAEFLLQTAPAGAFSSADELTGRVLASAVTAGEPITPARLVE 105 >gi|223984146|ref|ZP_03634297.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM 12042] gi|223963878|gb|EEF68239.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM 12042] Length = 238 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 2/92 (2%) Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60 + V L+F +++ + + + + ++ L + V ++ ++ + Sbjct: 12 LTAVLVLIFSGIFLFRRELTRRLSLVSVPISVSTLPPRHLITVDDLTWIDVPSAYLQADI 71 Query: 61 AHSIKDVVGLVTRR--VLLPDHVIPLSVLHRP 90 ++VGL TR + +L P Sbjct: 72 LWEEAELVGLWTRLEGTIPAGSFFYQEMLDAP 103 >gi|29826723|ref|NP_821357.1| hypothetical protein SAV_183 [Streptomyces avermitilis MA-4680] gi|29603819|dbj|BAC67892.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 234 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 6/103 (5%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSV 86 V + + G+VL+E L + + A + VVG L P ++ S Sbjct: 67 VVTVARDVQVGQVLSEEDLGKASIALDPAVKAVRAGDLDSVVGKRAAVELRPGSLLAPSQ 126 Query: 87 LHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIGDVIAV 128 + ++ G + V I L + AL +++ V Sbjct: 127 VTEDSLVKAGEQLVPIGLKSEQV----PATALVPGQKVELVHV 165 >gi|317154606|ref|YP_004122654.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2] gi|316944857|gb|ADU63908.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2] Length = 273 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 4/126 (3%) Query: 7 LLFFSLYVLSLDSLFASV--IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 L+F ++ + A VV + G L + L+ Q T + Sbjct: 24 LIFMWTSGVTQQPVAAPRAETVPVVVALTDLRPGIKLTPAMLETRQFTPDSRPSGAFGEP 83 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SI 122 + G V + + + + L VI G I + M++ + Sbjct: 84 GLLDGRVLGVAVGANEAVTEAKLADASVIGGGVSALIEPGKRAMSVKGNAVMGLAGFVRP 143 Query: 123 GDVIAV 128 GD + V Sbjct: 144 GDRVDV 149 >gi|224824212|ref|ZP_03697320.1| Flp pilus assembly protein CpaB [Lutiella nitroferrum 2002] gi|224603631|gb|EEG09806.1| Flp pilus assembly protein CpaB [Lutiella nitroferrum 2002] Length = 282 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV S+ I+ G L+ L+ + + +I K + G V + + I Sbjct: 27 AAQKVVVASMDIDLGSKLSPEMLRSVDWPSGSIPEGAILDPKALDGRVLKTSVNRGEAIL 86 Query: 84 LSVLHR 89 S L Sbjct: 87 ESKLAP 92 >gi|254700020|ref|ZP_05161848.1| hydrolase, UxaA family protein [Brucella suis bv. 5 str. 513] gi|261750503|ref|ZP_05994212.1| galactarate dehydratase [Brucella suis bv. 5 str. 513] gi|261740256|gb|EEY28182.1| galactarate dehydratase [Brucella suis bv. 5 str. 513] Length = 514 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|115526230|ref|YP_783141.1| N-acetylneuraminate synthase [Rhodopseudomonas palustris BisA53] gi|115520177|gb|ABJ08161.1| N-acetylneuraminate synthase [Rhodopseudomonas palustris BisA53] Length = 357 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 2/66 (3%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82 + VV + + G +L L + I + + +VG +R + + I Sbjct: 290 MVKRVVAARELKKGHMLAAEDLAFRIPVGAKITSHTLRPFEAEQIVGHALKRDIGFEEPI 349 Query: 83 PLSVLH 88 L Sbjct: 350 TRVDLG 355 >gi|294776375|ref|ZP_06741854.1| conjugative transposon TraN protein [Bacteroides vulgatus PC510] gi|294449791|gb|EFG18312.1| conjugative transposon TraN protein [Bacteroides vulgatus PC510] Length = 296 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 215 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKVLVIELVEKNGGRH 274 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 275 QTIRVENSD---IVAAKVINELKIK 296 >gi|23500539|ref|NP_699979.1| UxaA family hydrolase [Brucella suis 1330] gi|83269337|ref|YP_418628.1| D-galactarate dehydratase/altronate hydrolase [Brucella melitensis biovar Abortus 2308] gi|161620865|ref|YP_001594751.1| galactarate dehydratase [Brucella canis ATCC 23365] gi|189022612|ref|YP_001932353.1| hydrolase, UxaA family [Brucella abortus S19] gi|237816912|ref|ZP_04595904.1| UxaA family hydrolase [Brucella abortus str. 2308 A] gi|254690859|ref|ZP_05154113.1| hydrolase, UxaA family protein [Brucella abortus bv. 6 str. 870] gi|254698640|ref|ZP_05160468.1| hydrolase, UxaA family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732087|ref|ZP_05190665.1| hydrolase, UxaA family protein [Brucella abortus bv. 4 str. 292] gi|256015571|ref|YP_003105580.1| hydrolase, UxaA family [Brucella microti CCM 4915] gi|260544594|ref|ZP_05820415.1| hydrolase [Brucella abortus NCTC 8038] gi|260567930|ref|ZP_05838399.1| hydrolase [Brucella suis bv. 4 str. 40] gi|260756438|ref|ZP_05868786.1| galactarate dehydratase [Brucella abortus bv. 6 str. 870] gi|260759870|ref|ZP_05872218.1| galactarate dehydratase [Brucella abortus bv. 4 str. 292] gi|260763109|ref|ZP_05875441.1| galactarate dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|294853421|ref|ZP_06794093.1| galactarate dehydratase [Brucella sp. NVSL 07-0026] gi|23464173|gb|AAN33984.1| hydrolase, UxaA family [Brucella suis 1330] gi|82939611|emb|CAJ12597.1| D-galactarate dehydratase/Altronate hydrolase, N-terminal:D-galactarate dehydratase/Altronate hydrolase, C-terminal [Brucella melitensis biovar Abortus 2308] gi|161337676|gb|ABX63980.1| Galactarate dehydratase [Brucella canis ATCC 23365] gi|189021186|gb|ACD73907.1| hydrolase, UxaA family [Brucella abortus S19] gi|237787725|gb|EEP61941.1| UxaA family hydrolase [Brucella abortus str. 2308 A] gi|255998231|gb|ACU49918.1| hydrolase, UxaA family [Brucella microti CCM 4915] gi|260097865|gb|EEW81739.1| hydrolase [Brucella abortus NCTC 8038] gi|260154595|gb|EEW89676.1| hydrolase [Brucella suis bv. 4 str. 40] gi|260670188|gb|EEX57128.1| galactarate dehydratase [Brucella abortus bv. 4 str. 292] gi|260673530|gb|EEX60351.1| galactarate dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|260676546|gb|EEX63367.1| galactarate dehydratase [Brucella abortus bv. 6 str. 870] gi|294819076|gb|EFG36076.1| galactarate dehydratase [Brucella sp. NVSL 07-0026] Length = 514 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|315501061|ref|YP_004079948.1| saf domain protein [Micromonospora sp. L5] gi|315407680|gb|ADU05797.1| SAF domain protein [Micromonospora sp. L5] Length = 222 Score = 34.8 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIP 83 G + + ++ G L L ++V+ A + +V+GL L P ++ Sbjct: 56 TGTYLAVARPVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAAVRLTPGTLLT 115 Query: 84 LSVLHRPYVISRGAK 98 + L ++ G + Sbjct: 116 PAQLTEAPLLGPGQQ 130 >gi|254703141|ref|ZP_05164969.1| hydrolase, UxaA family protein [Brucella suis bv. 3 str. 686] gi|261753761|ref|ZP_05997470.1| galactarate dehydratase [Brucella suis bv. 3 str. 686] gi|261743514|gb|EEY31440.1| galactarate dehydratase [Brucella suis bv. 3 str. 686] Length = 514 Score = 34.8 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|62317360|ref|YP_223213.1| UxaA family hydrolase [Brucella abortus bv. 1 str. 9-941] gi|62197553|gb|AAX75852.1| hydrolase, UxaA family [Brucella abortus bv. 1 str. 9-941] Length = 514 Score = 34.8 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|148558072|ref|YP_001257750.1| UxaA family hydrolase [Brucella ovis ATCC 25840] gi|148369357|gb|ABQ62229.1| hydrolase, UxaA family [Brucella ovis ATCC 25840] Length = 514 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D + G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIAPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|144899766|emb|CAM76630.1| NeuB [Magnetospirillum gryphiswaldense MSR-1] Length = 337 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72 +L + + + ++ + I AG+++++ + + G + H + V+G Sbjct: 267 RILPTEEKWRAAARKSLYAARDIAAGQIISDDDIAIRR----PADGIHPHHLDLVIGRTA 322 Query: 73 RRVLLPDHVIPLSVL 87 R+ + +I ++ Sbjct: 323 RQAIACGALISWDMV 337 >gi|328545280|ref|YP_004305389.1| Flp pilus assembly CpaB [polymorphum gilvum SL003B-26A1] gi|326415022|gb|ADZ72085.1| Flp pilus assembly CpaB [Polymorphum gilvum SL003B-26A1] Length = 258 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 19/62 (30%), Gaps = 6/62 (9%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD------VVGLVTRRVLLPDHV 81 +V + I G+ L S + + + + +VG + + + Sbjct: 47 VLVATRDIRLGDHLAASDISWAEWPENVVPQGAITRQNQPDAEELMVGQIAKAPIYSGEP 106 Query: 82 IP 83 I Sbjct: 107 IR 108 >gi|261252086|ref|ZP_05944659.1| flp pilus assembly protein RcpC/CpaB [Vibrio orientalis CIP 102891] gi|260935477|gb|EEX91466.1| flp pilus assembly protein RcpC/CpaB [Vibrio orientalis CIP 102891] Length = 247 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 21/59 (35%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 + I AG V+ E + + +++VG V + P +I + L Sbjct: 49 AAQEIFAGSVIEEQHVTSRLLEKDWRDELQFTKAEELVGQVAATTIYPGEIIHPNRLSS 107 >gi|83749639|ref|ZP_00946622.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum UW551] gi|207728107|ref|YP_002256501.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2] gi|207744157|ref|YP_002260549.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609] gi|83723700|gb|EAP70895.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum UW551] gi|206591352|emb|CAQ56964.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2] gi|206595561|emb|CAQ62488.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609] Length = 284 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 +S I VV + I+ G+ L+ +K + ++++ + G V R L+ Sbjct: 33 SSGITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEP 92 Query: 82 IPLSVLHRP 90 + S L Sbjct: 93 VLESKLTPQ 101 >gi|330811038|ref|YP_004355500.1| hypothetical protein PSEBR_a4092 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379146|gb|AEA70496.1| Hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 271 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + VV +V I G+++ ++ +++ I + S + VG + +L ++ Sbjct: 39 LRSVVVATVEIPFGQMVEAQQVTTVRMPMDTIPDDAFDSSEQAVGKIATFDILRGDIVRG 98 Query: 85 SVLHR 89 + L Sbjct: 99 ARLSE 103 >gi|195391642|ref|XP_002054469.1| GJ24471 [Drosophila virilis] gi|194152555|gb|EDW67989.1| GJ24471 [Drosophila virilis] Length = 377 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN-YAHSIKDVVGLVTRRVLLPDHVIP 83 +G ++V + + + + + L S I Y D++G+ + + D I Sbjct: 316 LGKSIVAARNLEVRQQIQATDLAIKVSEPSGIPAEKYF----DIIGMRLKDSVYEDEPIT 371 Query: 84 LSVL 87 ++L Sbjct: 372 ENML 375 >gi|16588792|gb|AAL26896.1|AF317621_1 cadherin-related midgut membrane protein [Lymantria dispar] Length = 1723 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 13/94 (13%) Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV-ISRGAKVRII---LTQGNMTISTAGIA 116 A VG + R + P I Y+ + II + TI+ + Sbjct: 697 ATDRGTAVGRIIVRQIRPGVTIDYEEFEMLYLTVRVRDLNTIIGEDYDESTFTITI--VD 754 Query: 117 LSD-------ASIGDVIAVKNIDTGVMVSGSVVD 143 ++D ++ V+ + + +V GSV+ Sbjct: 755 MNDNPPVWVEGTLEQEFRVREMSSSGVVIGSVLA 788 >gi|33867071|ref|NP_898629.1| hypothetical protein PBD2.014 [Rhodococcus erythropolis] gi|33668905|gb|AAP73899.1| conserved hypothetical protein [Rhodococcus erythropolis] Length = 235 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + + +V S I G+ + L QV + I VVG V + V+ Sbjct: 71 VTNVLVVSQDIAQGQQITSQDLTTKQVNAHAGIASVAIEDKATVVGQVAAVPIPSGTVLN 130 Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128 + + + ++G + +T+S A + GD++ + Sbjct: 131 PNAVTSAVIPTKGLTLV------GVTVSYAKLPAEPLRAGDMVRI 169 >gi|218516081|ref|ZP_03512921.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium etli 8C-3] Length = 58 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 27/44 (61%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ 50 ++ + + + + +G+AVVP+ +I G+ L+ S+L+E++ Sbjct: 15 AAMIAVAGIMVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVE 58 >gi|209886527|ref|YP_002290384.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5] gi|209874723|gb|ACI94519.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5] Length = 272 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 24/146 (16%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA------HSIKDVVGLVTRRVLLP 78 +V I G+ + + + ++ ++ D+ G + R L Sbjct: 42 TTDVLVAKADIPLGQTIKAEDMTWQTWPAATASSSFIRKSERASAVADLTGSIARSPFLA 101 Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV----- 128 I + L + S G+ + M + I+ + G D + V Sbjct: 102 GEPIRETKLVK----SNGSGFMAAILPSGMRAVSTEISPETGAGGFILPNDRVDVMLSRR 157 Query: 129 -KNIDT--GVMVSGSVVDTGTVRVVV 151 +N D+ G MVS ++ + VRV+ Sbjct: 158 QRNPDSNGGEMVSSEIILSD-VRVLA 182 >gi|295087246|emb|CBK68769.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length = 286 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 205 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 264 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 265 QTIRVENSD---VVAAKVINELKIK 286 >gi|62389769|ref|YP_225171.1| hypothetical protein cg1002 [Corynebacterium glutamicum ATCC 13032] gi|21323646|dbj|BAB98273.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41325104|emb|CAF19585.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032] Length = 217 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 AVV I AG + S L + S + SI DVVGLV L + Sbjct: 44 TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 101 >gi|297572143|ref|YP_003697917.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595] gi|296932490|gb|ADH93298.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 203 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 10/117 (8%) Query: 6 FLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 F +++ SL S A AVV + + AG L++S L + + + + G+ Sbjct: 9 FAALVAVFAQSLVSALDSSAPARYRAVVAATDLPAGHQLSDSDLSVLPLP-TQLPGSTV- 66 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK-----VRIILTQGNMTISTAG 114 ++ DV G + +I + P + + + ++ G +++ G Sbjct: 67 NVTDVSGHHLLVSVPKGALISTHHVLSPQTLEQASPGYVIAPVLLADTGGLSLIHTG 123 >gi|118581114|ref|YP_902364.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503824|gb|ABL00307.1| SAF domain protein [Pelobacter propionicus DSM 2379] Length = 291 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 24/57 (42%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 VV S I G LN + LK M ++I K ++ ++ R + P + + Sbjct: 45 VVASADIPVGSKLNTTHLKMMAWPATSIPPGSFTDTKALIDRISIRPIGPGEPLTEA 101 >gi|315654208|ref|ZP_07907116.1| SAF domain protein [Mobiluncus curtisii ATCC 51333] gi|315491243|gb|EFU80860.1| SAF domain protein [Mobiluncus curtisii ATCC 51333] Length = 198 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 12 LYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69 L V + +LF VV + AG + +K + S + N+ V+G Sbjct: 20 LAVFVVVTLFLPEKAAATVVVVKHEVCAGCEITAQNVKLSALAPSAVPQNHFQKADRVIG 79 Query: 70 LVTRRVLLPDHVIPLSVLHRPYV 92 L V+ ++L V Sbjct: 80 KTAAVSLTSGTVLQPALLVENAV 102 >gi|293572500|ref|ZP_06683479.1| N-acetylneuraminate synthase [Enterococcus faecium E980] gi|294620995|ref|ZP_06700194.1| N-acetylneuraminate synthase [Enterococcus faecium U0317] gi|291599453|gb|EFF30471.1| N-acetylneuraminate synthase [Enterococcus faecium U0317] gi|291607417|gb|EFF36760.1| N-acetylneuraminate synthase [Enterococcus faecium E980] Length = 334 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V ++V + +N G++L E L + N +G +R + D V+ Sbjct: 273 EVSRKSLVVTENLNVGDILTEKSLTIKRPGNGIAPKFLY----QYIGKKVKRPISADSVL 328 Query: 83 PLSVLH 88 + Sbjct: 329 LEEDVE 334 >gi|120602160|ref|YP_966560.1| SAF domain-containing protein [Desulfovibrio vulgaris DP4] gi|120562389|gb|ABM28133.1| SAF domain [Desulfovibrio vulgaris DP4] Length = 272 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV +V + G + +LK +++ K +VG V + VI + L Sbjct: 45 VVSAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104 Query: 89 RPYVISRGAKVRI 101 S G I Sbjct: 105 PADATSGGVSTMI 117 >gi|84498693|ref|ZP_00997446.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649] gi|84381030|gb|EAP96917.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649] Length = 191 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 26/112 (23%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG---NYAHSIKDVVGLVTRRVLLP 78 A+V + + +G VL L+ Q+ + ++D+VG + + Sbjct: 15 PPPTTSALVAARDLPSGAVLTADDLRTTQIRGESDSPGTVGAVGRVRDLVGRLLTSPVAA 74 Query: 79 DHVIPLS-----------------------VLHRPYVISRGAKVRIILTQGN 107 ++ S ++S G +V + G Sbjct: 75 GELVTTSRLVPRTAAEGLPGDTVAAHVLHADERSLDLVSAGQRVTLFADTGG 126 >gi|69248924|ref|ZP_00604816.1| N-acetylneuraminate synthase [Enterococcus faecium DO] gi|257880181|ref|ZP_05659834.1| N-acetylneuraminate synthase [Enterococcus faecium 1,230,933] gi|257882983|ref|ZP_05662636.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,502] gi|257891434|ref|ZP_05671087.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,410] gi|68194334|gb|EAN08846.1| N-acetylneuraminate synthase [Enterococcus faecium DO] gi|257814409|gb|EEV43167.1| N-acetylneuraminate synthase [Enterococcus faecium 1,230,933] gi|257818641|gb|EEV45969.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,502] gi|257827794|gb|EEV54420.1| N-acetylneuraminate synthase [Enterococcus faecium 1,231,410] Length = 335 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V ++V + +N G++L E L + N +G +R + D V+ Sbjct: 274 EVSRKSLVVTENLNVGDILTEKSLTIKRPGNGIAPKFLY----QYIGKKVKRPISADSVL 329 Query: 83 PLSVLH 88 + Sbjct: 330 LEEDVE 335 >gi|299482785|gb|ADJ19196.1| Lea4 [Escherichia coli] Length = 333 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 ++ ++V S I AG ++ L+ + + + +VVG V ++ +I Sbjct: 279 IVRKSIVASKPIVAGTIITSDMLEIKRPGSGISPSRW----DEVVGSVAKKDYQIGELI 333 >gi|157952344|ref|YP_001497236.1| hypothetical protein NY2A_B040L [Paramecium bursaria Chlorella virus NY2A] gi|155122571|gb|ABT14439.1| hypothetical protein NY2A_B040L [Paramecium bursaria Chlorella virus NY2A] Length = 1471 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRV---LLPDHVI 82 VV + +I G +L +L + N +I GN + + R +L V Sbjct: 421 VVANYLIGNGMLLESVQLTVPRSANIDIVGNVIANANVDTQNITTTVMRTGNVILSGQVS 480 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + + Y + G+ + I G I+ G + + + N+ TGV+V+G+ + Sbjct: 481 VVGNVSAAYFVGNGSTITGIPATGTQPINIIGNVFAPGN----VNAANVSTGVIVAGNAI 536 Query: 143 DTGTVRVV 150 G + V Sbjct: 537 AVGQINTV 544 >gi|307293449|ref|ZP_07573295.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1] gi|306881515|gb|EFN12731.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1] Length = 338 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 H +V + + G +L+ + + Y + +VG V R + + Sbjct: 48 HVLVATKALPVGTILDAESFRFQPWPKELVEQAYYLKGQSDPQKLVGSVIRTAISAGQPM 107 Query: 83 PLSVLHRP 90 L + +P Sbjct: 108 TLGSVIKP 115 >gi|294146465|ref|YP_003559131.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] gi|292676882|dbj|BAI98399.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] Length = 302 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 2/71 (2%) Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77 + + V + I GE + + ++ + R YA + +VVG V R + Sbjct: 42 APVRVAAPVLLVRAARAIRTGETITAAMIRNAPGDPT--RYPYAATSAEVVGKVATRDIG 99 Query: 78 PDHVIPLSVLH 88 +I + Sbjct: 100 LHALIARDAVG 110 >gi|39936739|ref|NP_949015.1| hypothetical protein RPA3677 [Rhodopseudomonas palustris CGA009] gi|192292565|ref|YP_001993170.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1] gi|39650595|emb|CAE29118.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] gi|192286314|gb|ACF02695.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1] Length = 193 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 10/115 (8%) Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVV 68 + + +V I G+ + L+ + N+ D+ Sbjct: 36 PGAPAAPVAQTVEVLVAKNDIPLGQAVTPGDLQWQTWPAATASSNFIRRDLHPGATTDIG 95 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123 G +TR + I L + G+ M + AL + G Sbjct: 96 GSITRAPFIAGEPIRRQKLVQAD----GSSSVPAFVPTGMRAISTETALEPGATG 146 >gi|253701799|ref|YP_003022988.1| Flp pilus assembly protein CpaB [Geobacter sp. M21] gi|251776649|gb|ACT19230.1| Flp pilus assembly protein CpaB [Geobacter sp. M21] Length = 291 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67 L +S + S A VV + I G + ++LK +I A I+ V Sbjct: 24 LAYSFLQQEVKSAKAIQPQRIVVAAADIPIGTAITPAQLKVTSWPKDSIPPGSARDIEAV 83 Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89 V R + + + L Sbjct: 84 ANRVAIRPITGGDAVTEAKLKP 105 >gi|87199102|ref|YP_496359.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444] gi|87134783|gb|ABD25525.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444] Length = 342 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 4/68 (5%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 +V + G ++ + ++ Y ++ ++G V R + + Sbjct: 46 KVLVAQRALPVGTIITADSINFQAWPKDMVQDAYFVEGEADMQKLLGTVVRNPITAGEPV 105 Query: 83 PLSVLHRP 90 L P Sbjct: 106 TKGNLVAP 113 >gi|300704929|ref|YP_003746532.1| pilus assembly (cpab), transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299072593|emb|CBJ43943.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 284 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S I VV + I+ G+ L+ +K + ++++ + G V R L+ + Sbjct: 34 SGITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEPV 93 Query: 83 PLSVLHRP 90 S L Sbjct: 94 LESKLTPQ 101 >gi|269958186|ref|YP_003327974.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894] gi|269306867|gb|ACZ32416.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 234 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 7/100 (7%) Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYV 92 + G+V+ + L ++++ A S VVG L+ V+ + V Sbjct: 76 TVVRGQVITKDDLMSVRISVDPALHPVATSQSATVVGKRAALDLVAGGVVTAEQVTDTPV 135 Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132 + G V + +++A + +GD + + + Sbjct: 136 PADGQSVV------GLNLTSAMLPAQQIRVGDKVRIVSTS 169 >gi|253571572|ref|ZP_04848978.1| conjugate transposon [Bacteroides sp. 1_1_6] gi|251838780|gb|EES66865.1| conjugate transposon [Bacteroides sp. 1_1_6] Length = 302 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 281 QTIRVENSD---IVAAKVINELKIK 302 >gi|20807498|ref|NP_622669.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis MB4] gi|20516027|gb|AAM24273.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis MB4] Length = 268 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 10/89 (11%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 A + + G+ L S G + + GL T + P V+ + Sbjct: 25 AFAATYTVKPGDTL---------WGISQKYGITYTKLMALNGLQTT-TIYPGQVLQVPGN 74 Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIA 116 YV+ +G + +I + +T+ A Sbjct: 75 DNTYVVQKGDSLYLIAKKYGITVDALKAA 103 >gi|299132282|ref|ZP_07025477.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2] gi|298592419|gb|EFI52619.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2] Length = 273 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 6/67 (8%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA------HSIKDVVGLVTRRVLLP 78 +V I G+ + +K + ++ +IKD+ G + R L Sbjct: 43 TTDVLVAKSDIPLGQTITADDMKWQSWPAATASSSFVKKSERADAIKDMTGSIVRSPFLA 102 Query: 79 DHVIPLS 85 I + Sbjct: 103 GEPIRET 109 >gi|237722525|ref|ZP_04553006.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448335|gb|EEO54126.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 302 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKVLVIELVEKNGGRH 280 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 281 QTIRVENSD---VVAAKVINELKIK 302 >gi|189465155|ref|ZP_03013940.1| hypothetical protein BACINT_01500 [Bacteroides intestinalis DSM 17393] gi|189437429|gb|EDV06414.1| hypothetical protein BACINT_01500 [Bacteroides intestinalis DSM 17393] Length = 345 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64 R+L LY+ S + + ++ + ++ G+++ E + S G Sbjct: 266 RWLGKEELYIDSSVTSAKVKLERSIATNKTLHPGDIITEDDIHL----LSPGDGFKWAER 321 Query: 65 KDVVGLVTRRVLLPDHVIPLSVL 87 + VVG + + + +I S + Sbjct: 322 EKVVGHKVLKEIPRNEIIYPSSI 344 >gi|157953228|ref|YP_001498119.1| hypothetical protein AR158_C037L [Paramecium bursaria Chlorella virus AR158] gi|156067876|gb|ABU43583.1| hypothetical protein AR158_C037L [Paramecium bursaria Chlorella virus AR158] Length = 1467 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRV---LLPDHVI 82 VV + +I G +L +L + N +I GN + + R +L V Sbjct: 421 VVANYLIGNGMLLESVQLTVPRSANIDIVGNVIANANVDTQNITTTVMRTGNVILSGQVS 480 Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142 + + Y + G+ + I G I+ G + + + N+ TGV+V+G+ + Sbjct: 481 VVGNVSAAYFVGNGSTITGIPATGTQPINIIGNVFAPGN----VNAANVSTGVIVAGNAI 536 Query: 143 DTGTVRVV 150 G + V Sbjct: 537 AVGQINTV 544 >gi|19552105|ref|NP_600107.1| hypothetical protein NCgl0844 [Corynebacterium glutamicum ATCC 13032] Length = 184 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 AVV I AG + S L + S + SI DVVGLV L + Sbjct: 11 TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 68 >gi|56477529|ref|YP_159118.1| pilus assembly transmembrane protein [Aromatoleum aromaticum EbN1] gi|56313572|emb|CAI08217.1| pilus assembly transmembrane protein [Aromatoleum aromaticum EbN1] Length = 283 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 23/64 (35%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 V +V + G + ++ ++ + +I H + + G V + P + S Sbjct: 36 NRIAVAAVELQLGSRIAPEAIRLVEWPSGSIPAGAFHDLAKLDGRVAITGIQPGEPVLES 95 Query: 86 VLHR 89 L Sbjct: 96 RLAP 99 >gi|71900822|ref|ZP_00682940.1| Allantoinase [Xylella fastidiosa Ann-1] gi|71729392|gb|EAO31505.1| Allantoinase [Xylella fastidiosa Ann-1] Length = 449 Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 2/69 (2%) Query: 43 ESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102 +S L+ + I + KD+V R LLP + P + +G V Sbjct: 19 DSDLRIENGRIARIDTGLSAQSKDIVIDAAGRRLLPGMIDDQVHFREPGLTHKGDIVSES 78 Query: 103 LT--QGNMT 109 G +T Sbjct: 79 AAAVAGGLT 87 >gi|284172757|ref|YP_003406139.1| fumarylacetoacetate (FAA) hydrolase [Haloterrigena turkmenica DSM 5511] gi|284017517|gb|ADB63466.1| fumarylacetoacetate (FAA) hydrolase [Haloterrigena turkmenica DSM 5511] Length = 239 Score = 34.4 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%) Query: 63 SIKDVVGLVTRR-VLLPDHVIPLSVLHRPYVISRGAKVRIILTQ-GNMTISTAG 114 +VV +++R P V+ P +I G V I G + S G Sbjct: 183 DPYEVVSYLSKRFTFRPGDVVAFGSPANPGLIEPGDTVEITYENVGTLRNSVVG 236 >gi|270001379|gb|EEZ97826.1| hypothetical protein TcasGA2_TC000193 [Tribolium castaneum] Length = 350 Score = 34.4 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 +G ++V + + G++L +K I + KDV+G + V+ D I Sbjct: 290 LGKSLVAATTLRKGDILQHENIKIKVAEPKGIDASLL---KDVIGKHVKGVINEDESILQ 346 Query: 85 SVLH 88 L Sbjct: 347 ENLE 350 >gi|323499922|ref|ZP_08104881.1| Flp pilus assembly protein CpaB [Vibrio sinaloensis DSM 21326] gi|323315163|gb|EGA68215.1| Flp pilus assembly protein CpaB [Vibrio sinaloensis DSM 21326] Length = 247 Score = 34.4 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 22/64 (34%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ S I AG + E + + ++++G V + V+ + Sbjct: 45 PVIIASQEIPAGTPIEEQHVSSRLLEVDWRNEGQFTKAEELIGQVVATTIYQGEVVHQNR 104 Query: 87 LHRP 90 L P Sbjct: 105 LAAP 108 >gi|29345496|ref|NP_808999.1| conjugate transposon protein [Bacteroides thetaiotaomicron VPI-5482] gi|29337388|gb|AAO75193.1| conserved protein found in conjugate transposon [Bacteroides thetaiotaomicron VPI-5482] Length = 302 Score = 34.4 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTI---STAGIAL--SDASIG 123 V +R + + VI + ++ G + VR + T TI I L + Sbjct: 221 KVAKRTAIQETVIDPVRSYNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRH 280 Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148 I V+N D +V+ V++ ++ Sbjct: 281 QTIRVENSD---VVAAKVINELKIK 302 >gi|78485799|ref|YP_391724.1| N-acylneuraminate-9-phosphate synthase [Thiomicrospira crunogena XCL-2] gi|78364085|gb|ABB42050.1| N-acetylneuraminate synthase [Thiomicrospira crunogena XCL-2] Length = 334 Score = 34.4 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 4/69 (5%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 V + +S+ +V +V + I V +E + + G +A V+G + Sbjct: 267 VSASESMNIAVARKRIVAACPIAKNTVFSEENITLKRSD----SGVFATEWDQVIGQKST 322 Query: 74 RVLLPDHVI 82 R D I Sbjct: 323 RDYQEDEGI 331 >gi|330938338|gb|EGH41970.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. pisi str. 1704B] Length = 319 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 ++ + ++ + VV + I A + L ++ + R +I +VG Sbjct: 49 AIQTPPTPPVEDALRHNVVVLAKDIPANTAITADDLTIERLKVAPPRS--FEAIDKIVGR 106 Query: 71 VTRRVLLPDHVIPLSVLHR 89 + R L + S Sbjct: 107 SSWRTLTAGSWLTESNFEA 125 >gi|325525577|gb|EGD03367.1| Flp pilus assembly protein CpaB [Burkholderia sp. TJI49] Length = 277 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + V + +N GE L +++ + ++ K++ G V R L + Sbjct: 34 SSVTPIAVAATDLNLGEPLGPNQVHTVSWPTGSVPPGAFTDPKELDGRVVRTSLARGEPV 93 Query: 83 PLSVLHR 89 S L Sbjct: 94 IESKLAP 100 >gi|219848639|ref|YP_002463072.1| SAF domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219542898|gb|ACL24636.1| SAF domain protein [Chloroflexus aggregans DSM 9485] Length = 265 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66 L + + L A V+ + + G L+ L + + I+ S Sbjct: 28 LIVTAVFTVIAFLEAGQSEPVVILARDVPYGHQLSADDLTVVLLPRHRPIQLTGIASPAQ 87 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRP 90 V+G R L + ++ S++ Sbjct: 88 VIGQYAARNLSANDLLQPSMVTAQ 111 >gi|323700358|ref|ZP_08112270.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. ND132] gi|323460290|gb|EGB16155.1| Flp pilus assembly protein CpaB [Desulfovibrio desulfuricans ND132] Length = 273 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 2/100 (2%) Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90 + G L E L+ + T + +K V G V + + + L Sbjct: 50 AKTDLGRGVKLTEDMLEIRKFTQDSRPSGAFAEVKQVEGRVLNQTVGMGDALTPLKLADK 109 Query: 91 YVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128 ++ G I + M + + GD + V Sbjct: 110 SIMGGGVSALITPGKRAMAVKGNEVMGLSGFVRPGDRVDV 149 >gi|322434103|ref|YP_004216315.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9] gi|321161830|gb|ADW67535.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9] Length = 291 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 21/57 (36%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 H V S + +GE L ++ + SN +D+VG + D + Sbjct: 40 HYVAASRPLQSGEQLKPDSMELVNWPASNPIAGGFLKPEDLVGRSVLYPVEKDQPLT 96 >gi|258651609|ref|YP_003200765.1| SAF domain-containing protein [Nakamurella multipartita DSM 44233] gi|258554834|gb|ACV77776.1| SAF domain protein [Nakamurella multipartita DSM 44233] Length = 214 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 1/85 (1%) Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI- 64 L+ ++ + + S S ++AG V+ L ++V + G Y Sbjct: 27 LLVIAAIVLGARVMAAGSQTTPVWAASRSLSAGTVIGAGDLTAVEVNLGDQAGAYLTPAG 86 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHR 89 VG L ++ S + Sbjct: 87 DSPVGRTLVAPLGAGELLAGSAVEP 111 >gi|300692330|ref|YP_003753325.1| pilus assembly (cpaB), transmembrane protein [Ralstonia solanacearum PSI07] gi|299079390|emb|CBJ52061.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia solanacearum PSI07] Length = 284 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 24/68 (35%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 AS I V S + G+ L+ +K + +++ + G V + L Sbjct: 33 ASGITKVAVASADVELGQRLSPEMVKLVDWPAASLPPGVVTDAHALDGRVVKASLTRGEP 92 Query: 82 IPLSVLHR 89 + S L Sbjct: 93 VLESKLTP 100 >gi|193213897|ref|YP_001995096.1| carboxyl transferase [Chloroherpeton thalassium ATCC 35110] gi|193087374|gb|ACF12649.1| carboxyl transferase [Chloroherpeton thalassium ATCC 35110] Length = 513 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 +++ + + V G V +V GE++ E L V + + + + G++ Sbjct: 178 MMADKTSYMFVTGPKVAKTVT---GEMITEEDLGGASVHATKSGVTHFVAQDENEGILLI 234 Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKV 99 R LL +P + L P V+ + Sbjct: 235 RKLL--SYLPQNNLEEPQVVECDDPI 258 >gi|307721766|ref|YP_003892906.1| SAF domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979859|gb|ADN09894.1| SAF domain protein [Sulfurimonas autotrophica DSM 16294] Length = 292 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 V + + G++L+ +K+ ++ S I +++ R + D I L + Sbjct: 44 VFVAAKNLKKGDLLDAGSIKKAKLPKSYISFTPLTD-SEIISHYARVNIYKDEPIRLEKI 102 Query: 88 HRPYVISR 95 + + Sbjct: 103 SALKPVEK 110 >gi|170769778|ref|ZP_02904231.1| NnaB [Escherichia albertii TW07627] gi|170121392|gb|EDS90323.1| NnaB [Escherichia albertii TW07627] Length = 346 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V ++V I GEV + + N + +++G R D +I Sbjct: 282 VARKSIVAKRNIKKGEVFTIDNITIKRPGNGISPMYWY----ELLGKKAERDFDEDQLII 337 Query: 84 LSVLHRPYV 92 S V Sbjct: 338 QSGFVAQEV 346 >gi|149186254|ref|ZP_01864568.1| pilus assembly protein CpaB [Erythrobacter sp. SD-21] gi|148830285|gb|EDL48722.1| pilus assembly protein CpaB [Erythrobacter sp. SD-21] Length = 361 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 4/68 (5%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 +V + G ++ + ++ Y + ++G V R + + Sbjct: 47 KVLVAQRALPTGTIITADAIGYQLWPEELVQDAYFLDGEADVSKLIGTVVRHPVTAGEPV 106 Query: 83 PLSVLHRP 90 L P Sbjct: 107 TQGSLVSP 114 >gi|317125617|ref|YP_004099729.1| SAF domain protein [Intrasporangium calvum DSM 43043] gi|315589705|gb|ADU49002.1| SAF domain protein [Intrasporangium calvum DSM 43043] Length = 238 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66 L+ S + + A V + AG+ + + + + V S+ G Y + Sbjct: 42 LVLVSATLGARLVASADERTPYFVAVDDLVAGDRVTGATFRRVDVALSDGMGGYLRADFP 101 Query: 67 V-VGLVTRRVLLPDHVIPLSVLHRP 90 V VG R L ++P S L P Sbjct: 102 VPVGKALTRDLRAGELVPSSALSDP 126 >gi|226943876|ref|YP_002798949.1| sigma54-dependent activator protein [Azotobacter vinelandii DJ] gi|226718803|gb|ACO77974.1| sigma54-dependent activator protein [Azotobacter vinelandii DJ] Length = 466 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 14/93 (15%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL---------PDHVIPLSVLH 88 G V+ + + + + R + +G RV+ I L +L Sbjct: 31 GTVIVDRDARIVWINERYARRFGLADPAEALGQPVERVIPGSLLREVAHSGQPILLDMLD 90 Query: 89 RP--YVISRGAKVRIILTQGNMTISTAGIALSD 119 P ++ VR + +I G AL D Sbjct: 91 TPKDPLVVMRLPVR---DEDGRSIGAIGFALFD 120 >gi|254506783|ref|ZP_05118923.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16] gi|219550364|gb|EED27349.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16] Length = 233 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 21/64 (32%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ S I AG + E + + ++G V + P V+ + Sbjct: 31 PVIIASQEIPAGTPIEEQHITTKLLEVEWRNEGQFTDQNAILGQVVATTIFPGEVLHQNR 90 Query: 87 LHRP 90 L P Sbjct: 91 LTVP 94 >gi|189500073|ref|YP_001959543.1| Lytic transglycosylase catalytic [Chlorobium phaeobacteroides BS1] gi|189495514|gb|ACE04062.1| Lytic transglycosylase catalytic [Chlorobium phaeobacteroides BS1] Length = 596 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 19/98 (19%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTR----------------- 73 I G+ L + + S + Y + +GL+ + Sbjct: 473 KRTIYPGQKLKVYGVSSSTSSASTAKATYHKVRRGESLGLIAKKYGVSTSKLAAWNNLGS 532 Query: 74 -RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110 R + P + LS + + + RG + +I + +TI Sbjct: 533 KRTIYPGQRLRLSPATKIHKVRRGESLGLIAKKYGVTI 570 >gi|30249539|ref|NP_841609.1| type III antifreeze protein [Nitrosomonas europaea ATCC 19718] gi|30138902|emb|CAD85481.1| Type III antifreeze protein:CBS domain:NeuB family [Nitrosomonas europaea ATCC 19718] Length = 749 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + ++V + ++ G+++ S + S +G + I ++ G V +R Sbjct: 402 LAKSLVINCDLSQGQLIRRSMITVK----SPGQGLQPNRIDELAGKVAQRDFKAGDFFFE 457 Query: 85 SVLHRPYVISRGAKV 99 + + P + + V Sbjct: 458 TDI-TPKSVKKQHYV 471 >gi|84387246|ref|ZP_00990267.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01] gi|84377893|gb|EAP94755.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01] Length = 249 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 22/64 (34%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV S I AG ++ + L + I N D++G V + V+ Sbjct: 45 PVVVASQEIEAGTIIEDQFLTTRLMEVDWINENNYSDKADLIGKVVANTIYAGEVLHKLR 104 Query: 87 LHRP 90 P Sbjct: 105 FTVP 108 >gi|86147468|ref|ZP_01065780.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222] gi|85834761|gb|EAQ52907.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222] Length = 249 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 22/64 (34%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV S I AG V+ + L + I N +++G V + V+ Sbjct: 45 PVVVASQEIEAGTVIEDQYLTTKLMEVDWINENNYSDQNELIGKVVANTIYAGEVLHKLR 104 Query: 87 LHRP 90 P Sbjct: 105 FTVP 108 >gi|299821787|ref|ZP_07053675.1| N-acetylneuraminate synthase [Listeria grayi DSM 20601] gi|299817452|gb|EFI84688.1| N-acetylneuraminate synthase [Listeria grayi DSM 20601] Length = 342 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 8/62 (12%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDH 80 ++V I GE+ L + GN +K +++G + R D Sbjct: 274 EAARKSIVAKRSIRKGEIFTADNLTVKR------PGNGISPMKWYEILGKESTRDFAEDD 327 Query: 81 VI 82 +I Sbjct: 328 LI 329 >gi|207108996|ref|ZP_03243158.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter pylori HPKX_438_CA4C1] Length = 186 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 34/95 (35%), Gaps = 4/95 (4%) Query: 19 SLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76 + SVIG A + I E + + ++ ++ + D V + + Sbjct: 87 PVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKNFI 144 Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111 P+ ++ ++ + + + +G ++I Sbjct: 145 PPNTLLSADKTQALIIVRKNDIITGVYEEGQISIE 179 >gi|55469113|gb|AAV52288.1| putative N-acetyl neuramic acid synthetase NeuB [Aeromonas hydrophila] Length = 751 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V+G +++ + + GE++ + + S +G + ++G+V RR + Sbjct: 401 EVLGKSLICTRDLKIGEIITSNAVDIR----SPGKGLPPYEKNKLIGMVARRDIAVGDFF 456 Query: 83 PLSVLHR 89 S L+ Sbjct: 457 YPSDLNE 463 >gi|326383759|ref|ZP_08205444.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197523|gb|EGD54712.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 182 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 18/59 (30%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85 + + + G VL L + + + + + VG + +I + Sbjct: 24 RVLTAAADLRPGTVLTADDLTSVPMPAATVPASALRDTGKAVGQRLTGPVTRGEIITET 82 >gi|31792181|ref|NP_854674.1| hypothetical protein Mb1017c [Mycobacterium bovis AF2122/97] gi|121636917|ref|YP_977140.1| hypothetical protein BCG_1045c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|215402806|ref|ZP_03414987.1| hypothetical protein Mtub0_03760 [Mycobacterium tuberculosis 02_1987] gi|215410589|ref|ZP_03419397.1| hypothetical protein Mtub9_04524 [Mycobacterium tuberculosis 94_M4241A] gi|215426268|ref|ZP_03424187.1| hypothetical protein MtubT9_07731 [Mycobacterium tuberculosis T92] gi|215445138|ref|ZP_03431890.1| hypothetical protein MtubT_04052 [Mycobacterium tuberculosis T85] gi|224989389|ref|YP_002644076.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo 172] gi|260185899|ref|ZP_05763373.1| hypothetical protein MtubCP_07697 [Mycobacterium tuberculosis CPHL_A] gi|260200017|ref|ZP_05767508.1| hypothetical protein MtubT4_07787 [Mycobacterium tuberculosis T46] gi|289442410|ref|ZP_06432154.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46] gi|289446571|ref|ZP_06436315.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289744726|ref|ZP_06504104.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749518|ref|ZP_06508896.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92] gi|289757073|ref|ZP_06516451.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294995178|ref|ZP_06800869.1| hypothetical protein Mtub2_11847 [Mycobacterium tuberculosis 210] gi|298524484|ref|ZP_07011893.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis 94_M4241A] gi|31617769|emb|CAD93878.1| HYPOTHETICAL PROTEIN Mb1017c [Mycobacterium bovis AF2122/97] gi|121492564|emb|CAL71032.1| Hypothetical protein BCG_1045c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772502|dbj|BAH25308.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo 172] gi|289415329|gb|EFD12569.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46] gi|289419529|gb|EFD16730.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289685254|gb|EFD52742.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690105|gb|EFD57534.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92] gi|289712637|gb|EFD76649.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298494278|gb|EFI29572.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis 94_M4241A] gi|326904784|gb|EGE51717.1| hypothetical protein TBPG_02700 [Mycobacterium tuberculosis W-148] Length = 218 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 18/58 (31%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + G L ++ + + + + + VVG V+ Sbjct: 54 AEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111 >gi|331683723|ref|ZP_08384319.1| N-acetylneuraminate synthase [Escherichia coli H299] gi|331078675|gb|EGI49877.1| N-acetylneuraminate synthase [Escherichia coli H299] Length = 345 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V ++V I GE+ + + N + +V+G + L D +I Sbjct: 281 VARKSIVAKRDIKKGEIFTTDNITTKRPGNGISPMYWY----EVLGKKAEQDFLEDQLIK 336 Query: 84 LSVLHRPYV 92 +S + Sbjct: 337 VSGFEEQEI 345 >gi|78191376|gb|ABB29902.1| NnaB [Escherichia coli] Length = 345 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 V ++V I GE+ + + N + +V+G + L D +I Sbjct: 281 VARKSIVAKRDIKKGEIFTTDNITTKRPGNGISPMYWY----EVLGKKAEQDFLEDQLIK 336 Query: 84 LSVLHRPYV 92 +S + Sbjct: 337 VSGFEEQEI 345 >gi|239934071|ref|ZP_04691024.1| hypothetical protein SghaA1_38087 [Streptomyces ghanaensis ATCC 14672] Length = 182 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 38 GEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96 G+VL E L E V A +K VVG L P ++ S + + ++ G Sbjct: 22 GQVLTEQDLGEASVALDPAVKAVPADDLKSVVGKRAAVELKPGSLLSPSQVTKDSLVKPG 81 Query: 97 AK 98 + Sbjct: 82 EQ 83 >gi|309790167|ref|ZP_07684739.1| SAF domain protein [Oscillochloris trichoides DG6] gi|308227752|gb|EFO81408.1| SAF domain protein [Oscillochloris trichoides DG6] Length = 274 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 1/85 (1%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKD 66 L ++ + L L + VV + G+ ++ L + V Sbjct: 31 LLGAVTLAILGFLESRKSETVVVMVRDVPYGQQISAEDLGTVTVPLHRPAQLAGVSDPAT 90 Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPY 91 VVG R L + ++ S+L Sbjct: 91 VVGQYAARNLGSNDLLQPSMLMAAP 115 >gi|187927688|ref|YP_001898175.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J] gi|187724578|gb|ACD25743.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J] Length = 283 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + VV + ++ G+ L +L+ + ++ K + G V R L I Sbjct: 34 SSVKQVVVAASDMDLGQPLGNEQLRTVSWPAGSLPPGTFDDPKALQGRVVRASLQKGEPI 93 Query: 83 PLSVLHR 89 + L Sbjct: 94 LENKLAP 100 >gi|77919344|ref|YP_357159.1| Flp pilus assembly protein CpaB [Pelobacter carbinolicus DSM 2380] gi|77545427|gb|ABA88989.1| Flp pilus assembly protein CpaB [Pelobacter carbinolicus DSM 2380] Length = 272 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 + VV + +N G L+++ L Q +++ I+ VVG V+ ++ I Sbjct: 44 AMTEIVVAAADVNIGTRLDQTLLAMAQWPKASVPKGAFEDIEQVVGRVSVSKMVTGTPIL 103 Query: 84 LSVLHRP 90 + L P Sbjct: 104 AAELAAP 110 >gi|312199830|ref|YP_004019891.1| SAF domain protein [Frankia sp. EuI1c] gi|311231166|gb|ADP84021.1| SAF domain protein [Frankia sp. EuI1c] Length = 287 Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 4/110 (3%) Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYA--HSI 64 + S+ + + A V + AG V++ L ++ S+ G Y + Sbjct: 54 VLVSVVLGARLFATADRTSAWVAAKADLPAGHVVSAGDLVTVRAQLSDATAGRYYPGRRL 113 Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114 K+VVG R + +I S P + V I++ G + G Sbjct: 114 KEVVGGTLARPVGAGDLISGSDFAGPDT-AATRLVPIVVQAGRLPDLAPG 162 >gi|108801257|ref|YP_641454.1| hypothetical protein Mmcs_4293 [Mycobacterium sp. MCS] gi|119870408|ref|YP_940360.1| SAF domain-containing protein [Mycobacterium sp. KMS] gi|108771676|gb|ABG10398.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696497|gb|ABL93570.1| SAF domain [Mycobacterium sp. KMS] Length = 218 Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 22/66 (33%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV + + G L ES ++ + + + A V+G V+ Sbjct: 53 DVVVAATDLTPGTELAESDVRVERRPLTTVPDGAAVDPTAVIGATVAGPTRRGEVLTDVR 112 Query: 87 LHRPYV 92 L P + Sbjct: 113 LLGPRI 118 >gi|215429850|ref|ZP_03427769.1| hypothetical protein MtubE_04012 [Mycobacterium tuberculosis EAS054] gi|289753048|ref|ZP_06512426.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289693635|gb|EFD61064.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length = 218 Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 18/58 (31%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + G L ++ + + + + + VVG V+ Sbjct: 54 AEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111 >gi|289675700|ref|ZP_06496590.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae FF5] Length = 160 Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + VV + I A + L ++ + + +I +VG + R L + S Sbjct: 65 NVVVLARDIPAYTAITADDLTIERLKVAPL--GSFEAIDKIVGRSSWRTLTAGSWLTESN 122 Query: 87 LHR 89 Sbjct: 123 FEA 125 >gi|28899194|ref|NP_798799.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD 2210633] gi|153836767|ref|ZP_01989434.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810] gi|260361568|ref|ZP_05774595.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030] gi|260876725|ref|ZP_05889080.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034] gi|260898196|ref|ZP_05906692.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466] gi|260900396|ref|ZP_05908791.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037] gi|28807418|dbj|BAC60683.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749913|gb|EDM60658.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810] gi|308089099|gb|EFO38794.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466] gi|308091466|gb|EFO41161.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034] gi|308109142|gb|EFO46682.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037] gi|308114026|gb|EFO51566.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030] gi|328474269|gb|EGF45074.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 10329] Length = 251 Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 24/64 (37%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 VV ++ + G +L+E L + I + +G + + ++ + Sbjct: 45 PVVVATMELEPGTILDEKHLTTKLMEVDWIDDETLKVPEQALGRIVANTIYAGELVNPNR 104 Query: 87 LHRP 90 L +P Sbjct: 105 LAQP 108 >gi|308050060|ref|YP_003913626.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799] gi|307632250|gb|ADN76552.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799] Length = 288 Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 6/82 (7%) Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91 ++ + +G ++ E L V + + VVG+V + L+ + Sbjct: 44 AISVPSGTIIQEKHLVLKSVPPGLVPDEVLSKPEQVVGMVAKFPLVEGDFLSR-----QK 98 Query: 92 VISRGA-KVRIILTQGNMTIST 112 ++ +G V L NM T Sbjct: 99 LVPKGEGSVLASLIAPNMRAVT 120 >gi|254255253|ref|ZP_04948569.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158] gi|124900990|gb|EAY71740.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158] Length = 323 Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 S + V + +N GE L +++ + + ++ K + G V R L + Sbjct: 76 SAVTSVAVAATDLNLGEPLGANQIHMVSWPSGSVPTGAFTDTKALEGRVVRTSLARGEPV 135 Query: 83 PLSVLHR 89 S L Sbjct: 136 IESKLAP 142 >gi|323698198|ref|ZP_08110110.1| N-acetylneuraminate synthase [Desulfovibrio sp. ND132] gi|323458130|gb|EGB13995.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans ND132] Length = 338 Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V +V + I AGE E+ + + + G +V+GL +R P I Sbjct: 280 DVARRFLVATAPIKAGEPFTEANVAARR---TGCGGVSPMRWDEVMGLTAKRNFQPGEGI 336 >gi|256820499|ref|YP_003141778.1| efflux transporter, RND family, MFP subunit [Capnocytophaga ochracea DSM 7271] gi|256582082|gb|ACU93217.1| efflux transporter, RND family, MFP subunit [Capnocytophaga ochracea DSM 7271] Length = 359 Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 41 LNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100 + +L++ ++ N + NY +S V G R + ++ + ++S G + Sbjct: 135 VTAQQLEQARLQLKNAQANY-NSAAIVSGDTAVRS-KINGIVTSKEVEEGTLVSAGQTLF 192 Query: 101 IILTQGNMTISTAGIALSDA--SIGDVIAVKNIDTGVMVSGSVV 142 ++ N+ + +GDV+ +K + ++ G ++ Sbjct: 193 NVVNIDNLKLKITVDESQVGELKVGDVVKIKPSTSSELIDGKII 236 >gi|225851159|ref|YP_002731393.1| N-acetylneuraminate synthase [Persephonella marina EX-H1] gi|225644874|gb|ACO03060.1| N-acetylneuraminate synthase [Persephonella marina EX-H1] Length = 335 Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 4/60 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V ++V I GE+ E L + + +++G R D VI Sbjct: 276 PVARKSIVAKRDIKKGEIFTEENLTVKRPGTGISPMRW----NEIIGKKAPRDFKKDEVI 331 >gi|15608130|ref|NP_215505.1| hypothetical protein Rv0990c [Mycobacterium tuberculosis H37Rv] gi|15840415|ref|NP_335452.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551] gi|148660771|ref|YP_001282294.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra] gi|167968056|ref|ZP_02550333.1| hypothetical protein MtubH3_08483 [Mycobacterium tuberculosis H37Ra] gi|254231287|ref|ZP_04924614.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C] gi|254363908|ref|ZP_04979954.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str. Haarlem] gi|306775124|ref|ZP_07413461.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis SUMu001] gi|306781961|ref|ZP_07420298.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis SUMu002] gi|306783684|ref|ZP_07422006.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis SUMu003] gi|306788039|ref|ZP_07426361.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis SUMu004] gi|306792372|ref|ZP_07430674.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis SUMu005] gi|306796774|ref|ZP_07435076.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis SUMu006] gi|306802661|ref|ZP_07439329.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis SUMu008] gi|306806841|ref|ZP_07443509.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis SUMu007] gi|306967040|ref|ZP_07479701.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis SUMu009] gi|306971230|ref|ZP_07483891.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis SUMu010] gi|307078960|ref|ZP_07488130.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis SUMu011] gi|307083518|ref|ZP_07492631.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis SUMu012] gi|2052124|emb|CAB08150.1| HYPOTHETICAL PROTEIN Rv0990c [Mycobacterium tuberculosis H37Rv] gi|13880585|gb|AAK45266.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551] gi|124600346|gb|EAY59356.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C] gi|134149422|gb|EBA41467.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str. Haarlem] gi|148504923|gb|ABQ72732.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra] gi|308216331|gb|EFO75730.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis SUMu001] gi|308325350|gb|EFP14201.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis SUMu002] gi|308331529|gb|EFP20380.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis SUMu003] gi|308335333|gb|EFP24184.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis SUMu004] gi|308339140|gb|EFP27991.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis SUMu005] gi|308342811|gb|EFP31662.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis SUMu006] gi|308346664|gb|EFP35515.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis SUMu007] gi|308350579|gb|EFP39430.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis SUMu008] gi|308355270|gb|EFP44121.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis SUMu009] gi|308359224|gb|EFP48075.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis SUMu010] gi|308363136|gb|EFP51987.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis SUMu011] gi|308366793|gb|EFP55644.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis SUMu012] gi|323720557|gb|EGB29638.1| hypothetical protein TMMG_02985 [Mycobacterium tuberculosis CDC1551A] Length = 218 Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 18/58 (31%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + G L ++ + + + + + VVG V+ Sbjct: 54 SEVVVAAHDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111 >gi|229819398|ref|YP_002880924.1| SAF domain protein [Beutenbergia cavernae DSM 12333] gi|229565311|gb|ACQ79162.1| SAF domain protein [Beutenbergia cavernae DSM 12333] Length = 207 Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 +V + I A + + + ++ + + + + + DVVG L + + + Sbjct: 37 DVLVAAHDIAAAQEIVPADVRVVALPADAVPPDALDAADDVVGRQLAHALPAGYPLGPGM 96 Query: 87 LHRPYVIS---RGAKV 99 + P + RG V Sbjct: 97 VLGPGLADGAPRGTTV 112 >gi|54026930|ref|YP_121172.1| hypothetical protein nfa49560 [Nocardia farcinica IFM 10152] gi|54018438|dbj|BAD59808.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 221 Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 20/71 (28%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 + VV + + G VL + L ++ + G + P V Sbjct: 52 GAARIPVVVAARELPPGTVLAAADLTVAPHEAGSLPAGAVRDPAVLTGATLTAAMHPGEV 111 Query: 82 IPLSVLHRPYV 92 + P + Sbjct: 112 FTDLRVVGPRL 122 >gi|302185188|ref|ZP_07261861.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae 642] Length = 319 Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 2/79 (2%) Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70 ++ + ++ + VV + I A + L ++ +I +VG Sbjct: 49 AIQTPPTPPVEDALRHNVVVLARDIPAYTAITADDLTIERLKV--APPGSFEAIDKIVGR 106 Query: 71 VTRRVLLPDHVIPLSVLHR 89 + R L + S Sbjct: 107 SSWRTLTAGSWLTESNFEA 125 >gi|134291858|ref|YP_001115627.1| SAF domain-containing protein [Burkholderia vietnamiensis G4] gi|134135047|gb|ABO59372.1| SAF domain protein [Burkholderia vietnamiensis G4] Length = 281 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 24/65 (36%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 + V + +N GE L +++ + ++ K++ G V R L + Sbjct: 36 VTSVAVATTDLNLGEPLGPNQIHMVSWPAGSVPTGAFTDTKELEGRVVRTSLARGEPVIE 95 Query: 85 SVLHR 89 S L Sbjct: 96 SKLAP 100 >gi|328908302|gb|EGG28061.1| SAF domain protein [Propionibacterium sp. P08] Length = 219 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + I G V+ S L+ +++ + A ++ V G + ++ S + Sbjct: 63 VVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAA-ALAQVEGRQASVRITEGTILTTSAV 121 >gi|294678479|ref|YP_003579094.1| sialic acid synthase [Rhodobacter capsulatus SB 1003] gi|294477299|gb|ADE86687.1| sialic acid synthase [Rhodobacter capsulatus SB 1003] Length = 342 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88 VV + AG ++ E+ + + S Y VVG T R L + + S L Sbjct: 286 VVADRDLPAGHLITEADI-WARRPGSGEIAGY--DFDKVVGKRTTRALPRNTQLKWSDLA 342 >gi|257792166|ref|YP_003182772.1| N-acylneuraminate-9-phosphate synthase [Eggerthella lenta DSM 2243] gi|257476063|gb|ACV56383.1| N-acylneuraminate-9-phosphate synthase [Eggerthella lenta DSM 2243] Length = 345 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 10/65 (15%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI---KDVVGLVTRRVLLPDHVIP 83 ++ I+ GE + ++ +IR Y + ++G +++R + I Sbjct: 287 RSLYAVDSISKGEPFTKDNVR-------SIRPGYGIAPKHLDKLLGRISKRDIDFGSPIT 339 Query: 84 LSVLH 88 L Sbjct: 340 EDDLD 344 >gi|284038638|ref|YP_003388568.1| hypothetical protein Slin_3774 [Spirosoma linguale DSM 74] gi|283817931|gb|ADB39769.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74] Length = 791 Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 FS+ + S D+ + ++ +N + + E L E V + SI+DV+ Sbjct: 519 AFSISIKSADNQYIPTFSIPILAGRNLNPSDTVREYLLNETAVKALQLA-----SIQDVI 573 Query: 69 GLVTRRVLLPDHVI 82 G P ++ Sbjct: 574 GKTATINGRPGTIV 587 >gi|148822199|ref|YP_001286953.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11] gi|218752660|ref|ZP_03531456.1| hypothetical protein MtubG1_04075 [Mycobacterium tuberculosis GM 1503] gi|253799982|ref|YP_003032983.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN 1435] gi|254549974|ref|ZP_05140421.1| hypothetical protein Mtube_05853 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289555228|ref|ZP_06444438.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN 605] gi|289761124|ref|ZP_06520502.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM 1503] gi|297633515|ref|ZP_06951295.1| hypothetical protein MtubK4_05303 [Mycobacterium tuberculosis KZN 4207] gi|297730500|ref|ZP_06959618.1| hypothetical protein MtubKR_05383 [Mycobacterium tuberculosis KZN R506] gi|313657829|ref|ZP_07814709.1| hypothetical protein MtubKV_05383 [Mycobacterium tuberculosis KZN V2475] gi|148720726|gb|ABR05351.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11] gi|253321485|gb|ACT26088.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN 1435] gi|289439860|gb|EFD22353.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN 605] gi|289708630|gb|EFD72646.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM 1503] gi|328459724|gb|AEB05147.1| hypothetical protein TBSG_03018 [Mycobacterium tuberculosis KZN 4207] Length = 218 Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 18/58 (31%) Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83 VV + + G L ++ + + + + + VVG V+ Sbjct: 54 SEVVVAAQDLRPGTALTPGDVRLEKRSATTLPDGSQADLDAVVGSTLASPTRRGEVLT 111 >gi|294012240|ref|YP_003545700.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] gi|292675570|dbj|BAI97088.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] Length = 295 Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV----GLVTRRVLLPDH 80 + VV +V + G + +++ + +++ + G V R + P Sbjct: 27 MAKVVVATVSLPFGSAVTAEKIRVVDWPANSVPPGAFRDPIQLTSLGKGRVVLRQIEPGE 86 Query: 81 VIPLS 85 I S Sbjct: 87 PILAS 91 >gi|297172345|gb|ADI23321.1| hypothetical protein [uncultured nuHF2 cluster bacterium HF0770_19K18] Length = 1262 Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 4/42 (9%) Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126 + P ++ R + T + I G A ++ IG I Sbjct: 545 NGFEEPILVYRND----VSTGNPLRIKLKGKASNNGGIGAKI 582 >gi|241662166|ref|YP_002980526.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D] gi|309780761|ref|ZP_07675502.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA] gi|240864193|gb|ACS61854.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D] gi|308920443|gb|EFP66099.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA] Length = 283 Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%) Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81 S I V + I+ G+ L+ +K + S++ + + G V R L Sbjct: 33 GSGITKIAVAATDIDLGQRLSPEAIKLVDWPASSLPPGAINDPHALDGRVVRASLTRGEP 92 Query: 82 IPLSVLHR 89 + S L Sbjct: 93 VLDSKLTP 100 >gi|257790639|ref|YP_003181245.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] gi|257474536|gb|ACV54856.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243] Length = 432 Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80 + VV + + AGE + E+ L+ V + + A + DV G + Sbjct: 257 NVVVTNRDVAAGETITEADLETQAVPKAYCPTDAATKVSDVAGHTSLTTQTAGT 310 >gi|307294423|ref|ZP_07574267.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1] gi|306880574|gb|EFN11791.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1] Length = 307 Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV----GLVTRRVLLPDH 80 + VV +V + G + +++ + +++ + G V R + P Sbjct: 41 MAKVVVATVSLPFGSAVTAEKIRTVDWPANSVPPGAFRDPIQLTSLGKGRVVLRQIEPGE 100 Query: 81 VIPLS 85 I S Sbjct: 101 PILAS 105 >gi|294012432|ref|YP_003545892.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] gi|292675762|dbj|BAI97280.1| Flp pilus assembly protein CpaB [Sphingobium japonicum UT26S] Length = 338 Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82 H +V + + G +L+ + + Y + +VG V R + + Sbjct: 48 HVLVATKALPVGTILDAESFRFQPWPKDLVEQAYYIKGQADPQKLVGSVIRTAISAGQPM 107 Query: 83 PLSVLHRP 90 L + +P Sbjct: 108 TLGSVIKP 115 >gi|76801923|ref|YP_326931.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Natronomonas pharaonis DSM 2160] gi|76557788|emb|CAI49372.1| probable 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 3; probable 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 3 [Natronomonas pharaonis DSM 2160] Length = 236 Score = 34.1 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 50 QVTNSNIRGNYAHSIKDVVGLVTRR-VLLPDHVIPLSVLHRPYVISRGAKVRIILTQ-GN 107 ++ + N ++V+ ++ R L PD VI P ++ RG ++ I G Sbjct: 169 ELRQEDNTENMFIKPREVISFLSERFTLKPDDVISFGSPANPGLLERGDEIEIYYEGIGT 228 Query: 108 MTISTAG 114 + + G Sbjct: 229 LRNTVGG 235 >gi|317489752|ref|ZP_07948251.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911098|gb|EFV32708.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 215 Score = 33.7 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 20/61 (32%) Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89 V I AGE ++ S ++ + S DVVG +L V+ Sbjct: 52 VAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSGDVVGKKASSTILAGEVLSERRFRD 111 Query: 90 P 90 Sbjct: 112 A 112 >gi|289424445|ref|ZP_06426228.1| SAF domain protein [Propionibacterium acnes SK187] gi|289155142|gb|EFD03824.1| SAF domain protein [Propionibacterium acnes SK187] Length = 205 Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 +V + I G V+ S L +++ + A + V G + ++ S + Sbjct: 38 VIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEGTILTSSAV 96 Query: 88 HRPYVISRGA 97 + G Sbjct: 97 LSGSAVGSGK 106 >gi|302390221|ref|YP_003826042.1| D-proline reductase (dithiol) [Thermosediminibacter oceani DSM 16646] gi|302200849|gb|ADL08419.1| D-proline reductase (dithiol) [Thermosediminibacter oceani DSM 16646] Length = 584 Score = 33.7 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 30/132 (22%) Query: 38 GEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLPDHVIPLSVL---- 87 G +++ + L++ + + V+G + + I ++ Sbjct: 25 GTIISPADLEDPAIFPDLEDSGLLTIPENVLTIGQVLGKKLIKTIDALTPITPDMIEGGL 84 Query: 88 ---HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV----MVSGS 140 +P V+ V+ +G A + G+VI + +I+ G + Sbjct: 85 DQGEKPEVVEEAEMVQ------------SGAAQTVTGAGNVIRI-HIEEGKGINLEIPAI 131 Query: 141 VVDTGTVRVVVK 152 V GT K Sbjct: 132 VTAAGTAEPAAK 143 >gi|160878992|ref|YP_001557960.1| hypothetical protein Cphy_0834 [Clostridium phytofermentans ISDg] gi|160427658|gb|ABX41221.1| hypothetical protein Cphy_0834 [Clostridium phytofermentans ISDg] Length = 300 Score = 33.7 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 + + IN GE+L++ LK++ + Y ++ +G + + D I ++ Sbjct: 46 YVYLAKDTINPGEILSDDNLKKVYLECDMPTEYYITEVQ--LGTMAIIPIEVDMPILRTM 103 >gi|326792632|ref|YP_004310453.1| N-acetylneuraminate synthase [Clostridium lentocellum DSM 5427] gi|326543396|gb|ADZ85255.1| N-acetylneuraminate synthase [Clostridium lentocellum DSM 5427] Length = 333 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI--KDVVGLVTRRVLLPDH 80 +V ++V + IN GE L E L + GN + +V+G R D Sbjct: 275 AVARKSIVAARPINLGERLTEENLNVKR------PGNGISPMKWDEVIGRKALRNYEKDE 328 Query: 81 VI 82 +I Sbjct: 329 LI 330 >gi|256059016|ref|ZP_05449227.1| hydrolase, UxaA family protein [Brucella neotomae 5K33] gi|261322961|ref|ZP_05962158.1| galactarate dehydratase [Brucella neotomae 5K33] gi|261298941|gb|EEY02438.1| galactarate dehydratase [Brucella neotomae 5K33] Length = 514 Score = 33.7 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI----STAGIALSDASIGDVI 126 V R + I + + +I RG KV + + G+A D G+ + Sbjct: 23 VARVPVRAGDPIGIDEITARELIGRGHKVALRAIPAGREVLKYGQVIGVATRDIVPGEHV 82 Query: 127 AVKNI 131 ++N+ Sbjct: 83 HLQNL 87 >gi|89100212|ref|ZP_01173079.1| hypothetical protein B14911_20170 [Bacillus sp. NRRL B-14911] gi|89085062|gb|EAR64196.1| hypothetical protein B14911_20170 [Bacillus sp. NRRL B-14911] Length = 274 Score = 33.7 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 38/86 (44%) Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68 FF L +S + + V + I + ++ ++K +++ N + ++ +++D++ Sbjct: 24 FFVLQKVSALNSELGGMTEVYVAASDIPSRTLIEREQVKTVEIPNRYVNNSHVTNVEDLI 83 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVIS 94 V + + VI +++ + Sbjct: 84 NKVLVVPVAAEDVITKTMIKPVSNVR 109 >gi|85714635|ref|ZP_01045622.1| N-acetylneuraminate synthase [Nitrobacter sp. Nb-311A] gi|85698520|gb|EAQ36390.1| N-acetylneuraminate synthase [Nitrobacter sp. Nb-311A] Length = 358 Score = 33.7 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 +V ++V + I G++L + L E + ++G R +PD +I Sbjct: 301 AVARRSLVAARAIRKGDILTQDMLAEKRPGTGLPPIEALR----LIGRPAGRDYMPDDLI 356 Query: 83 PL 84 Sbjct: 357 EP 358 >gi|73542328|ref|YP_296848.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134] gi|72119741|gb|AAZ62004.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134] Length = 280 Score = 33.7 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 27/62 (43%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + +N G+ LN S+L+ + +++ +K + G V R L + + L Sbjct: 39 VVVAANDLNLGQPLNGSQLRLVNWPTASVPPGAFEDLKLLEGRVVRTSLQRGEPVLDAKL 98 Query: 88 HR 89 Sbjct: 99 AP 100 >gi|3057081|gb|AAC38341.1| nitrous oxide reductase [uncultured eubacterium S321195C] Length = 528 Score = 33.7 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 14/120 (11%) Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVV-- 68 + VL FA +V + ++N V + S +VV Sbjct: 381 MAVLHDGPTFAEPHDCIIVRADIVNPRSVWARDDAMWATTAAQAAKDGVKLESGSEVVRE 440 Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ--------GNMTISTAGIALSDA 120 G R + + + + + +G +V +I+T +TI+ G+A+ Sbjct: 441 GNKVRVYIWS---VAPTFSMEKFTVKQGDEVTLIVTNLDKVDDLTHGITIANYGVAMEVG 497 >gi|145295050|ref|YP_001137871.1| hypothetical protein cgR_0993 [Corynebacterium glutamicum R] gi|140844970|dbj|BAF53969.1| hypothetical protein [Corynebacterium glutamicum R] Length = 217 Score = 33.7 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84 AVV I AG + S L + S + SI DVVGLV L + Sbjct: 44 TAVVIVQEIPAGTKVESSDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATK 101 >gi|313835437|gb|EFS73151.1| SAF domain protein [Propionibacterium acnes HL037PA2] gi|314928544|gb|EFS92375.1| SAF domain protein [Propionibacterium acnes HL044PA1] gi|314970476|gb|EFT14574.1| SAF domain protein [Propionibacterium acnes HL037PA3] Length = 191 Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87 VV + I G V+ S L+ +++ + A ++ V G + ++ S + Sbjct: 35 VVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAA-ALAQVEGRQASVRITEGTILTTSAV 93 >gi|88855598|ref|ZP_01130261.1| putative membrane/secreted protein [marine actinobacterium PHSC20C1] gi|88814922|gb|EAR24781.1| putative membrane/secreted protein [marine actinobacterium PHSC20C1] Length = 215 Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%) Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK-DVVGLVTRRVLLPDHVIPLSV 86 + G+ + S L V ++ Y + V G + R + +IP S Sbjct: 50 VYAAGAPLTPGDRVLSSDLVIRSVKLNDASQYYIARGELPVEGFIATRPIGAGELIPASS 109 Query: 87 LHR 89 L Sbjct: 110 LGS 112 >gi|125975123|ref|YP_001039033.1| N-acetylneuraminate synthase [Clostridium thermocellum ATCC 27405] gi|256003221|ref|ZP_05428213.1| N-acylneuraminate-9-phosphate synthase [Clostridium thermocellum DSM 2360] gi|281418456|ref|ZP_06249475.1| N-acetylneuraminate synthase [Clostridium thermocellum JW20] gi|125715348|gb|ABN53840.1| N-acetylneuraminate synthase [Clostridium thermocellum ATCC 27405] gi|255992912|gb|EEU03002.1| N-acylneuraminate-9-phosphate synthase [Clostridium thermocellum DSM 2360] gi|281407540|gb|EFB37799.1| N-acetylneuraminate synthase [Clostridium thermocellum JW20] gi|316939290|gb|ADU73324.1| N-acetylneuraminate synthase [Clostridium thermocellum DSM 1313] Length = 330 Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 V ++V I GE+ E L + N + +V+G R D +I Sbjct: 274 VARKSIVAKRYIQKGEIFTEENLTVKRPGNGISPMQWF----EVLGRRAVRDFQEDELI 328 >gi|301614600|ref|XP_002936778.1| PREDICTED: copper-transporting ATPase 2-like [Xenopus (Silurana) tropicalis] Length = 1483 Score = 33.7 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRII----LTQGNMTISTAGIALSDASIGDVIAVKN 130 + +I ++ RG V+++ I +A G+ + V+ Sbjct: 840 TFGANQIILREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGTSMADESLITGEPMPVRK 899 Query: 131 IDTGVMVSGSVVDTGTVRVVV 151 ++++GS+ GTV V Sbjct: 900 KPGSMVIAGSINAHGTVLVEA 920 >gi|313672686|ref|YP_004050797.1| n-acetylneuraminate synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312939442|gb|ADR18634.1| N-acetylneuraminate synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 343 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 ++ I GEV +E ++ ++ Y K+++G R + I + Sbjct: 285 RSLFAVEDIKKGEVFSEKNVRSIRPGYGLHPKYY----KEIIGKKANRDIPRGTPISWDI 340 Query: 87 LHR 89 + + Sbjct: 341 IEK 343 >gi|254785441|ref|YP_003072870.1| N-acylneuraminate-9-phosphate synthase [Teredinibacter turnerae T7901] gi|237685192|gb|ACR12456.1| N-acylneuraminate-9-phosphate synthase [Teredinibacter turnerae T7901] Length = 333 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 + ++V INAG++ + L + N+ +V+G +R PD +I Sbjct: 277 IARKSIVARTAINAGDIFSIDNLAVKRPGTGISPMNW----DEVIGRQAKRDYSPDELI 331 >gi|261367847|ref|ZP_05980730.1| N-acetylneuraminate synthase [Subdoligranulum variabile DSM 15176] gi|282570653|gb|EFB76188.1| N-acetylneuraminate synthase [Subdoligranulum variabile DSM 15176] Length = 331 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVLLPDH 80 +V ++V + I AGEV L + G+ ++ DV+G R D Sbjct: 274 AVARKSIVAARPIKAGEVFTADNLTTKR------PGDGISPMRWYDVLGKTAPRDFDEDE 327 Query: 81 VI 82 I Sbjct: 328 KI 329 >gi|116208740|ref|XP_001230179.1| hypothetical protein CHGG_03663 [Chaetomium globosum CBS 148.51] gi|88184260|gb|EAQ91728.1| hypothetical protein CHGG_03663 [Chaetomium globosum CBS 148.51] Length = 983 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 11/84 (13%) Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVIS--RGAKVRIILTQGNMTISTAGIALSDASIGD 124 +VGLV +I P VI RGA++RI + G+ ++ IA A G+ Sbjct: 659 LVGLVA--------IIDPPRPEIPEVIKTLRGARIRIFMVTGDFALTAQAIARELADYGE 710 Query: 125 VIAVKNIDTGVM-VSGSVVDTGTV 147 V+ + + + + G V Sbjct: 711 VVFARTTPEQKLRIVRELQARGHV 734 >gi|27364257|ref|NP_759785.1| N-acetylneuraminate synthase [Vibrio vulnificus CMCP6] gi|320157650|ref|YP_004190029.1| legionaminic acid synthase [Vibrio vulnificus MO6-24/O] gi|27360375|gb|AAO09312.1| N-acetylneuraminate synthase [Vibrio vulnificus CMCP6] gi|319932962|gb|ADV87826.1| legionaminic acid synthase [Vibrio vulnificus MO6-24/O] Length = 333 Score = 33.7 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82 ++ ++V I AG ++ L+ + N G +VVG + ++ +I Sbjct: 279 IVRKSLVAGKPIMAGSIICADMLEIKRPGN----GISPTRWDEVVGSIAKKDYQIGELI 333 >gi|266625537|ref|ZP_06118472.1| putative Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] gi|288862557|gb|EFC94855.1| putative Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479] Length = 231 Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 38/97 (39%), Gaps = 3/97 (3%) Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94 I G+ + ++ ++V + N+ + ++V+G ++P I S + Sbjct: 12 IKIGDKVTGDMVRSVEVGSLNLPSEVMKNKENVIGKYASADMVPGDYIINSKVADEPAAE 71 Query: 95 RGAKVRIILTQGNMTISTAGIALS-DASI--GDVIAV 128 + + +++S A + GD+++V Sbjct: 72 NAYLYNLSGEKQAISVSVKSFATGLSGKLKSGDIVSV 108 >gi|325288260|ref|YP_004264441.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM 8271] gi|324963661|gb|ADY54440.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM 8271] Length = 274 Score = 33.7 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62 C+ L V L + S V I AG+ + + ++ ++V + N Sbjct: 14 CILLSLLICFGVTPLFNKSVSQKTEIVRVVKEIKAGDEITKDTVQTVEVGGFGLPDNVIR 73 Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122 + V+G + L I + L + T+ M+++ A + Sbjct: 74 QSEMVIGKYAKSDLSIGDYILNTKLSDTPAAENAYLYNLDGTKQAMSVTIKSFA--NGLS 131 Query: 123 GDVIAVKNIDTGVMVS 138 G + +G +VS Sbjct: 132 GK------LQSGDIVS 141 >gi|302864767|ref|YP_003833404.1| SAF domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302567626|gb|ADL43828.1| SAF domain protein [Micromonospora aurantiaca ATCC 27029] Length = 222 Score = 33.7 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%) Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIP 83 G + + ++ G L L ++V+ A + +V+GL L P ++ Sbjct: 56 TGTYLAVARQVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAAVRLTPGTLLT 115 Query: 84 LSVLHRPYVISRGAK 98 + L ++ G + Sbjct: 116 PAQLTEAPLLGPGQQ 130 >gi|187923644|ref|YP_001895286.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN] gi|187714838|gb|ACD16062.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN] Length = 316 Score = 33.7 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 2/76 (2%) Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73 L + VV + + AG+ + ++ + + + G V Sbjct: 31 ALVAVTPATQASFRVVVATHTLPAGKAITVDDVRVQSLPIN--PNGAFTDPAQLAGRVPN 88 Query: 74 RVLLPDHVIPLSVLHR 89 + + + S L Sbjct: 89 AEIGAESPVLESQLSS 104 >gi|256396011|ref|YP_003117575.1| SAF domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362237|gb|ACU75734.1| SAF domain protein [Catenulispora acidiphila DSM 44928] Length = 222 Score = 33.7 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIP 83 +V + G+V++ LK + + + +A K VVG L+PD V+ Sbjct: 64 PVLVVGAPVQVGQVISADDLKVVDIAPGTLAHVAFADEEKQVVGQPAAVPLVPDEVLT 121 >gi|163857692|ref|YP_001631990.1| putative Flp pilus assembly protein [Bordetella petrii DSM 12804] gi|163261420|emb|CAP43722.1| putative Flp pilus assembly protein [Bordetella petrii] Length = 320 Score = 33.7 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86 V+ + I AG L+ LK Q G +D+ G V R + I Sbjct: 56 PVVLAAKDIQAGTRLDAGMLKVQQWPIPLAHG--YAKPEDLAGQVARLDIAGGEPITNQS 113 Query: 87 LHR 89 L + Sbjct: 114 LAQ 116 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.155 0.416 Lambda K H 0.267 0.0475 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,929,505,469 Number of Sequences: 14124377 Number of extensions: 131457231 Number of successful extensions: 354017 Number of sequences better than 10.0: 1810 Number of HSP's better than 10.0 without gapping: 1772 Number of HSP's successfully gapped in prelim test: 654 Number of HSP's that attempted gapping in prelim test: 350933 Number of HSP's gapped (non-prelim): 2821 length of query: 152 length of database: 4,842,793,630 effective HSP length: 115 effective length of query: 37 effective length of database: 3,218,490,275 effective search space: 119084140175 effective search space used: 119084140175 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 76 (33.7 bits)