HHsearch alignment for GI: 254780378 and conserved domain: COG1256

>COG1256 FlgK Flagellar hook-associated protein [Cell motility and secretion].
Probab=98.62  E-value=2.9e-08  Score=69.64  Aligned_cols=64  Identities=30%  Similarity=0.551  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf             04899999999999965999775421777340000222999998764025676655566545666311442021123223
Q gi|254780378|r    2 KAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNV   81 (262)
Q Consensus         2 r~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~   81 (262)
T Consensus         5 s~lnta~sgl~a~q~~l~vtg~NIsNant~gYsRQrv~~~~~~----------------~~~~~~~~~G~Gv~V~sI~R~   68 (552)
T COG1256           5 SLLNTALSGLNAAQAALDVTGHNISNANTPGYSRQRVIQTTNI----------------PYLGGGLNVGTGVNVVSIQRL   68 (552)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCC----------------CCCCCCCCCCCCEEEEEEEEH
T ss_conf             7799999999999999987561335689998630210432356----------------643576666676488863116