HHsearch alignment for GI: 254780378 and conserved domain: PRK05683
>PRK05683 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.50 E-value=2.2e-07 Score=64.31 Aligned_cols=64 Identities=34% Similarity=0.517 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 48999999999999659997754217773400002229999987640256766555665456663114420211232233
Q gi|254780378|r 3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNVY 82 (262)
Q Consensus 3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~ 82 (262)
T Consensus 3 ll~ig~sgL~a~q~al~vt~~NIaN~nT~GYsRq~v~~~~~~---------~-------~~~~~~~~G~Gv~v~~i~R~~ 66 (676)
T PRK05683 3 LISIGLSGLGASQTALATTGNNIANVDTAGYSRQQAVQTTKA---------S-------QFSGAGYIGTGTTLADVRRIY 66 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC---------C-------CCCCCCCEECCEEEEEEEEHH
T ss_conf 789999999999999998736664179988140166631346---------7-------556785031588973598816