HHsearch alignment for GI: 254780378 and conserved domain: PRK05683

>PRK05683 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.50  E-value=2.2e-07  Score=64.31  Aligned_cols=64  Identities=34%  Similarity=0.517  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf             48999999999999659997754217773400002229999987640256766555665456663114420211232233
Q gi|254780378|r    3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNVY   82 (262)
Q Consensus         3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~   82 (262)
T Consensus         3 ll~ig~sgL~a~q~al~vt~~NIaN~nT~GYsRq~v~~~~~~---------~-------~~~~~~~~G~Gv~v~~i~R~~   66 (676)
T PRK05683          3 LISIGLSGLGASQTALATTGNNIANVDTAGYSRQQAVQTTKA---------S-------QFSGAGYIGTGTTLADVRRIY   66 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC---------C-------CCCCCCCEECCEEEEEEEEHH
T ss_conf             789999999999999998736664179988140166631346---------7-------556785031588973598816