HHsearch alignment for GI: 254780378 and conserved domain: PRK06945
>PRK06945 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.58 E-value=9.3e-08 Score=66.60 Aligned_cols=64 Identities=33% Similarity=0.460 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 89999999999996599977542177734000022299999876402567665556654566631144202112322335
Q gi|254780378|r 4 FMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNVYT 83 (262)
Q Consensus 4 ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~ 83 (262)
T Consensus 5 l~ig~sgL~a~Q~~l~vtg~NIaN~nT~GYsRq~v~~~~~---------~~-------~~~~~g~~G~Gv~v~~I~R~~D 68 (649)
T PRK06945 5 FNIGVSGLNAAQWGLTTTGHNISNAATPGYSRQRPVQAEA---------SG-------QYTGSGYLGQGVNTVTVKRQYN 68 (649)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC---------CC-------CCCCCCCCCCCEEEEEEEEHHH
T ss_conf 8999999999999999885756517898804016663045---------77-------4557875457779836998042