HHsearch alignment for GI: 254780378 and conserved domain: PRK07739
>PRK07739 flgK flagellar hook-associated protein FlgK; Validated.
Probab=99.77 E-value=2.6e-19 Score=136.86 Aligned_cols=70 Identities=30% Similarity=0.395 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 4899999999999965999775421777340000222999998764025676655566545666311442021123223
Q gi|254780378|r 3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNV 81 (262)
Q Consensus 3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~ 81 (262)
T Consensus 7 ~Lnia~SGL~a~Q~~l~vt~~NIANanT~GYsRq~v~~~~~~~~~~---------~g~~~~~~~gq~G~GV~v~~V~R~ 76 (500)
T PRK07739 7 GLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPT---------VSRNDPKGPGQMGTGVEAGSIERI 76 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC---------CCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 5999999999999999999775732799980520567643467556---------665566677754367687458883