HHsearch alignment for GI: 254780378 and conserved domain: PRK12620

>PRK12620 flgB flagellar basal body rod protein FlgB; Provisional.

Probab=98.87  E-value=3.4e-09  Score=75.31  Aligned_cols=45  Identities=24%  Similarity=0.476  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             489999999999996599977542177734000022299999876
Q gi|254780378|r    3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQA   47 (262)
Q Consensus         3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~   47 (262)
T Consensus         8 ~~~~~~~aL~lr~~Rq~viasNIANadTPgYKardv~Fe~~L~~a   52 (132)
T PRK12620          8 FLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSA   52 (132)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf             862889999999999999986022168999876658789999998