HHsearch alignment for GI: 254780378 and conserved domain: PRK12629
>PRK12629 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=99.73 E-value=3.3e-17 Score=124.03 Aligned_cols=45 Identities=31% Similarity=0.558 Sum_probs=42.6
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 073001023499999999999999999999999999999998715
Q gi|254780378|r 217 QGYLEASNVDAVKEISEMISAQRAYEMNSKVIEAADEMSSLITKM 261 (262)
Q Consensus 217 qG~LE~SNVd~~~Emv~lI~~qR~ye~n~k~i~t~Dem~~~~~~l 261 (262)
T Consensus 89 ~GyV~~pnVn~~~EMvdm~~AsRsYEANv~~~~~aK~m~~~aL~i 133 (135)
T PRK12629 89 DGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTM 133 (135)
T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 988846898889999999999999999999999999999999985