HHsearch alignment for GI: 254780378 and conserved domain: PRK12630
>PRK12630 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=99.76 E-value=1.1e-17 Score=126.91 Aligned_cols=45 Identities=29% Similarity=0.578 Sum_probs=42.4
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 073001023499999999999999999999999999999998715
Q gi|254780378|r 217 QGYLEASNVDAVKEISEMISAQRAYEMNSKVIEAADEMSSLITKM 261 (262)
Q Consensus 217 qG~LE~SNVd~~~Emv~lI~~qR~ye~n~k~i~t~Dem~~~~~~l 261 (262)
T Consensus 97 ~GyV~~PnVd~~~EMvdm~~AsRsYEANv~v~~~aK~m~~~tL~i 141 (143)
T PRK12630 97 EGYVSMPNVNVLNEMADMMASTRSYEANVTAMNAEKSMFSKALEI 141 (143)
T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 988846898889999999999999999999999999999999985