HHsearch alignment for GI: 254780378 and conserved domain: PRK12631
>PRK12631 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=99.71 E-value=1.1e-16 Score=120.90 Aligned_cols=45 Identities=40% Similarity=0.663 Sum_probs=42.7
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 073001023499999999999999999999999999999998715
Q gi|254780378|r 217 QGYLEASNVDAVKEISEMISAQRAYEMNSKVIEAADEMSSLITKM 261 (262)
Q Consensus 217 qG~LE~SNVd~~~Emv~lI~~qR~ye~n~k~i~t~Dem~~~~~~l 261 (262)
T Consensus 92 ~GyV~~pNVd~~~EMvdm~~A~RsYeANv~~~~~ak~m~~~aL~I 136 (138)
T PRK12631 92 DGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLRM 136 (138)
T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 888844898889999999999999999999999999999999974