HHsearch alignment for GI: 254780378 and conserved domain: PRK12692

>PRK12692 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00  E-value=0  Score=511.84  Aligned_cols=260  Identities=55%  Similarity=0.887  Sum_probs=241.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             90489999999999996599977542177734000022299999876402567665556654566631144202112322
Q gi|254780378|r    1 MKAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRN   80 (262)
Q Consensus         1 lr~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~   80 (262)
T Consensus         1 lr~ly~a~sGm~a~q~~ldviaNNlANvnT~GfK~~~~~F~~~l~~~~~~~~~~~~~~~-~~~~~~~~~g~gv~~~~~~~   79 (262)
T PRK12692          1 MRALAIAATGMSAQQLNVEVIANNIANLNTTGFKRARAEFTDLLYQAERQQGVPNQAGQ-EAVPEGAMLGLGVRAAAIRN   79 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCC-CCCCCCCEECCCEEEEEEEE
T ss_conf             92399999999999971478888998777664585746389999877521477665677-44676653234135535787


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             33578733265212123237752653148985778752122352588341466761044310135653221013312552
Q gi|254780378|r   81 VYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLVPGIVIPEETREIKVSRSGQILA  160 (262)
Q Consensus        81 ~~~qG~l~~Tg~~lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl~~~~~p~~~~~i~i~~dG~I~~  160 (262)
T Consensus        80 ~~~qG~l~~Tg~~lDlAI~G~GfF~V~~~~G~~~yTR~G~F~~d~~G~Lvt~~G~~v~~~i~~p~~~~~i~i~~~G~i~~  159 (262)
T PRK12692         80 LHRQGPLAQTGNPLDLAVNGRGWFQVTGPNGEINYTRAGSFNKNADGQLVTAEGYAVDPAILIPQNTTQVTINESGQVFA  159 (262)
T ss_pred             ECCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf             51578742169810389868967999747995878974537899999988178877477521688851588779855999


Q ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             15886543222110000026620010068864334666655200024677620686073001023499999999999999
Q gi|254780378|r  161 VTGKNSDFQPVGQLLIANFINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQRA  240 (262)
Q Consensus       161 ~~~~~~~~~~i~~i~l~~f~n~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~Emv~lI~~qR~  240 (262)
T Consensus       160 ~~~g~~~~~~ig~l~l~~f~~~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~EMv~mI~~qRa  239 (262)
T PRK12692        160 KLDGQVTPQLLGQLTLANFANESGLEPLGNGLYRETPASGAPVVGVPGDVGFGKIQQGYLESSNVDPVKEITELISAQRA  239 (262)
T ss_pred             ECCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCHHHHHHHHHHHHHH
T ss_conf             52787675300058899615802032568862014666778544678878745383176103556599999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999999998715
Q gi|254780378|r  241 YEMNSKVIEAADEMSSLITKM  261 (262)
Q Consensus       241 ye~n~k~i~t~Dem~~~~~~l  261 (262)
T Consensus       240 fe~n~k~i~~~Dem~~~~~~l  260 (262)
T PRK12692        240 FEMNSKVIQAADEMAGTVSKG  260 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999976