HHsearch alignment for GI: 254780378 and conserved domain: PRK12692
>PRK12692 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00 E-value=0 Score=511.84 Aligned_cols=260 Identities=55% Similarity=0.887 Sum_probs=241.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 90489999999999996599977542177734000022299999876402567665556654566631144202112322
Q gi|254780378|r 1 MKAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRN 80 (262)
Q Consensus 1 lr~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~ 80 (262)
T Consensus 1 lr~ly~a~sGm~a~q~~ldviaNNlANvnT~GfK~~~~~F~~~l~~~~~~~~~~~~~~~-~~~~~~~~~g~gv~~~~~~~ 79 (262)
T PRK12692 1 MRALAIAATGMSAQQLNVEVIANNIANLNTTGFKRARAEFTDLLYQAERQQGVPNQAGQ-EAVPEGAMLGLGVRAAAIRN 79 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCC-CCCCCCCEECCCEEEEEEEE
T ss_conf 92399999999999971478888998777664585746389999877521477665677-44676653234135535787
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 33578733265212123237752653148985778752122352588341466761044310135653221013312552
Q gi|254780378|r 81 VYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLVPGIVIPEETREIKVSRSGQILA 160 (262)
Q Consensus 81 ~~~qG~l~~Tg~~lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl~~~~~p~~~~~i~i~~dG~I~~ 160 (262)
T Consensus 80 ~~~qG~l~~Tg~~lDlAI~G~GfF~V~~~~G~~~yTR~G~F~~d~~G~Lvt~~G~~v~~~i~~p~~~~~i~i~~~G~i~~ 159 (262)
T PRK12692 80 LHRQGPLAQTGNPLDLAVNGRGWFQVTGPNGEINYTRAGSFNKNADGQLVTAEGYAVDPAILIPQNTTQVTINESGQVFA 159 (262)
T ss_pred ECCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 51578742169810389868967999747995878974537899999988178877477521688851588779855999
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15886543222110000026620010068864334666655200024677620686073001023499999999999999
Q gi|254780378|r 161 VTGKNSDFQPVGQLLIANFINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQRA 240 (262)
Q Consensus 161 ~~~~~~~~~~i~~i~l~~f~n~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~Emv~lI~~qR~ 240 (262)
T Consensus 160 ~~~g~~~~~~ig~l~l~~f~~~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~EMv~mI~~qRa 239 (262)
T PRK12692 160 KLDGQVTPQLLGQLTLANFANESGLEPLGNGLYRETPASGAPVVGVPGDVGFGKIQQGYLESSNVDPVKEITELISAQRA 239 (262)
T ss_pred ECCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 52787675300058899615802032568862014666778544678878745383176103556599999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999998715
Q gi|254780378|r 241 YEMNSKVIEAADEMSSLITKM 261 (262)
Q Consensus 241 ye~n~k~i~t~Dem~~~~~~l 261 (262)
T Consensus 240 fe~n~k~i~~~Dem~~~~~~l 260 (262)
T PRK12692 240 FEMNSKVIQAADEMAGTVSKG 260 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999976