HHsearch alignment for GI: 254780378 and conserved domain: pfam00460
>pfam00460 Flg_bb_rod Flagella basal body rod protein.
Probab=98.65 E-value=1.3e-08 Score=71.78 Aligned_cols=31 Identities=58% Similarity=0.812 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 8999999999999659997754217773400
Q gi|254780378|r 4 FMIAAAGMSAQQTNLEIIANNIANINTTGYK 34 (262)
Q Consensus 4 ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK 34 (262)
T Consensus 1 l~~a~sal~a~~~~l~vianNiAN~nT~G~k 31 (31)
T pfam00460 1 LYTAVSALNAQQIALDVIANNIANANTTGYK 31 (31)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9138876508999999998610245576789