HHsearch results for GI: 254780378 and protein with PDBid: 3a69_A
>3a69_A Flagellar HOOK protein FLGE; the bacterial flagellar motor, universal joint, bacterial flagellum, motor protein; 7.10A {Salmonella enterica subsp}
Probab=100.00 E-value=0 Score=374.28 Aligned_cols=239 Identities=35% Similarity=0.610 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 48999999999999659997754217773400002229999987640256766555665456663114420211232233
Q gi|254780378|r 3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNVY 82 (262)
Q Consensus 3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~ 82 (262)
|||||+|||.|+|++|+|++|||||+|||||||+++.|++++. +.++|.||++.++.++|
T Consensus 1 s~~~a~sGl~A~q~al~vts~NIANaNT~GYsRq~v~f~~~~~--------------------~~~~G~GV~v~~v~r~~ 60 (402)
T 3a69_A 1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------------------GSKVGLGVKVAGITQDF 60 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC--------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHC--------------------CCCCCCCEEEEEEEEEC
T ss_conf 9789999999999735788888987776420657020777646--------------------68776744776789841
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC-----------------CCCC-
Q ss_conf 5787332652121232377526531489857787521223525883414667610443-----------------1013-
Q gi|254780378|r 83 TQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLVPG-----------------IVIP- 144 (262)
Q Consensus 83 ~qG~l~~Tg~~lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl~~-----------------~~~p- 144 (262)
.||.++.|++++|+||.|+|||.+..++|+.+|||.|+|.+|.+|+||+..|+.|++. +.++
T Consensus 61 ~qg~~~~t~~~~d~ai~~~g~f~~~~~~g~~~~tr~g~~~~~~~g~lvn~~g~~l~g~~~~~~~~~~~~~~~~~~~~i~~ 140 (402)
T 3a69_A 61 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPN 140 (402)
T ss_dssp ----------CEECCCSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCCEEEEEECBTTTTBCCTTCCCEECCCCC
T ss_pred CCCCEEECCCCCHHEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45645764760030142786178862798643641565342788878637896441231457775222567655521444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780378|r 145 -------------------------------------------------------------------------------- 144 (262)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (262)
T Consensus 141 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (402)
T 3a69_A 141 TLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAAT 220 (402)
T ss_dssp CCCCCBCCCEEEEEEEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCC
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCC
T ss_conf 45676553036763024655556653444557765513333379985899726666787763788523797036665554
Q ss_pred -----------------------------------------------------------------CCCCCCCCCCCCEEE
Q ss_conf -----------------------------------------------------------------565322101331255
Q gi|254780378|r 145 -----------------------------------------------------------------EETREIKVSRSGQIL 159 (262)
Q Consensus 145 -----------------------------------------------------------------~~~~~i~i~~dG~I~ 159 (262)
.....+.|++||.|.
T Consensus 221 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~dG~~~~~~~~~~i~~dG~v~ 300 (402)
T 3a69_A 221 APTTASTTLKFNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVV 300 (402)
T ss_dssp CCCSCSEEEEECTTSBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEESCBCCCCEEEEEECTTCEEE
T ss_pred CCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEE
T ss_conf 66555226874146521457720002345456555431000011200135653112102466555421234217895599
Q ss_pred ECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21588654322211000002662001006886433466665520002467762068607300102349999999999999
Q gi|254780378|r 160 AVTGKNSDFQPVGQLLIANFINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQR 239 (262)
Q Consensus 160 ~~~~~~~~~~~i~~i~l~~f~n~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~Emv~lI~~qR 239 (262)
+.+.. +....++++.++.|.||..|.+.|+++|..+..+|.+..+.+.....++|.||+||.||||+.+||++||..||
T Consensus 301 ~~~~~-~~~~~~~~~~~~~~~n~~~l~~~g~~~~~~~~~sg~~~~~~~~~~~~~~~~~~~lE~S~V~ldeEmtnli~~Q~ 379 (402)
T 3a69_A 301 GNYSN-EQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQR 379 (402)
T ss_dssp EEETT-SCEEEEEEECEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCCC---------CHHHHHHHHHHHH
T ss_pred EEECC-CCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHH
T ss_conf 97356-54210011234566785773304796064355677730067887873148107545114799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999987159
Q gi|254780378|r 240 AYEMNSKVIEAADEMSSLITKMR 262 (262)
Q Consensus 240 ~ye~n~k~i~t~Dem~~~~~~lr 262 (262)
+||+|+|+|++.|||+++++|||
T Consensus 380 aY~A~akvitt~demld~linlk 402 (402)
T 3a69_A 380 NYQSNAQTIKTQDQILNTLVNLR 402 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99997526649999999997059