Query gi|254780378|ref|YP_003064791.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 262
No_of_seqs 139 out of 2802
Neff 7.2
Searched_HMMs 23785
Date Mon May 30 10:28:05 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780378.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a69_A Flagellar HOOK protein 100.0 0 0 374.3 17.1 239 3-262 1-402 (402)
2 1wlg_A Flagellar HOOK protein 100.0 3.1E-33 1.3E-37 220.2 8.3 135 94-229 2-299 (299)
3 1q7f_A NHL, brain tumor CG1071 70.2 4.8 0.0002 18.4 5.3 14 91-104 121-134 (286)
4 1ucu_A Phase 1 flagellin; flag 47.2 12 0.00052 15.9 4.9 38 224-261 455-492 (494)
5 1eej_A Thiol:disulfide interch 42.6 9 0.00038 16.7 1.7 36 101-138 25-60 (216)
6 1zxu_A AT5G01750 protein; PFAM 41.8 15 0.00063 15.4 3.3 50 89-139 33-90 (217)
7 3bu7_A Gentisate 1,2-dioxygena 37.4 17 0.00074 15.0 3.8 43 84-128 136-178 (394)
8 2ghs_A AGR_C_1268P; regucalcin 36.5 18 0.00076 14.9 4.7 51 148-199 233-293 (326)
9 2p9w_A MAL S 1 allergenic prot 35.6 19 0.00079 14.8 4.9 17 92-108 138-154 (334)
10 1nig_A Hypothetical protein TA 31.8 20 0.00084 14.6 2.0 19 220-238 39-57 (152)
11 1ory_B Flagellin; flagellar ch 30.2 19 0.00081 14.7 1.7 38 223-260 15-52 (55)
12 2dg1_A DRP35, lactonase; beta 26.7 26 0.0011 13.9 3.8 14 149-162 237-250 (333)
13 1rwi_B Serine/threonine-protei 26.2 27 0.0011 13.8 5.0 11 150-160 155-165 (270)
No 1
>3a69_A Flagellar HOOK protein FLGE; the bacterial flagellar motor, universal joint, bacterial flagellum, motor protein; 7.10A {Salmonella enterica subsp}
Probab=100.00 E-value=0 Score=374.28 Aligned_cols=239 Identities=35% Similarity=0.610 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 48999999999999659997754217773400002229999987640256766555665456663114420211232233
Q gi|254780378|r 3 AFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGISIGSGVQISSVRNVY 82 (262)
Q Consensus 3 ~ly~a~sgm~a~~~~l~~isnNlAN~nT~GfK~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~ 82 (262)
|||||+|||.|+|++|+|++|||||+|||||||+++.|++++. +.++|.||++.++.++|
T Consensus 1 s~~~a~sGl~A~q~al~vts~NIANaNT~GYsRq~v~f~~~~~--------------------~~~~G~GV~v~~v~r~~ 60 (402)
T 3a69_A 1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------------------GSKVGLGVKVAGITQDF 60 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC--------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHC--------------------CCCCCCCEEEEEEEEEC
T ss_conf 9789999999999735788888987776420657020777646--------------------68776744776789841
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC-----------------CCCC-
Q ss_conf 5787332652121232377526531489857787521223525883414667610443-----------------1013-
Q gi|254780378|r 83 TQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLVPG-----------------IVIP- 144 (262)
Q Consensus 83 ~qG~l~~Tg~~lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl~~-----------------~~~p- 144 (262)
.||.++.|++++|+||.|+|||.+..++|+.+|||.|+|.+|.+|+||+..|+.|++. +.++
T Consensus 61 ~qg~~~~t~~~~d~ai~~~g~f~~~~~~g~~~~tr~g~~~~~~~g~lvn~~g~~l~g~~~~~~~~~~~~~~~~~~~~i~~ 140 (402)
T 3a69_A 61 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPN 140 (402)
T ss_dssp ----------CEECCCSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCCEEEEEECBTTTTBCCTTCCCEECCCCC
T ss_pred CCCCEEECCCCCHHEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45645764760030142786178862798643641565342788878637896441231457775222567655521444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780378|r 145 -------------------------------------------------------------------------------- 144 (262)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (262)
T Consensus 141 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (402)
T 3a69_A 141 TLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAAT 220 (402)
T ss_dssp CCCCCBCCCEEEEEEEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCC
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCC
T ss_conf 45676553036763024655556653444557765513333379985899726666787763788523797036665554
Q ss_pred -----------------------------------------------------------------CCCCCCCCCCCCEEE
Q ss_conf -----------------------------------------------------------------565322101331255
Q gi|254780378|r 145 -----------------------------------------------------------------EETREIKVSRSGQIL 159 (262)
Q Consensus 145 -----------------------------------------------------------------~~~~~i~i~~dG~I~ 159 (262)
.....+.|++||.|.
T Consensus 221 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~dG~~~~~~~~~~i~~dG~v~ 300 (402)
T 3a69_A 221 APTTASTTLKFNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVV 300 (402)
T ss_dssp CCCSCSEEEEECTTSBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEESCBCCCCEEEEEECTTCEEE
T ss_pred CCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEE
T ss_conf 66555226874146521457720002345456555431000011200135653112102466555421234217895599
Q ss_pred ECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21588654322211000002662001006886433466665520002467762068607300102349999999999999
Q gi|254780378|r 160 AVTGKNSDFQPVGQLLIANFINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQR 239 (262)
Q Consensus 160 ~~~~~~~~~~~i~~i~l~~f~n~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~Emv~lI~~qR 239 (262)
+.+.. +....++++.++.|.||..|.+.|+++|..+..+|.+..+.+.....++|.||+||.||||+.+||++||..||
T Consensus 301 ~~~~~-~~~~~~~~~~~~~~~n~~~l~~~g~~~~~~~~~sg~~~~~~~~~~~~~~~~~~~lE~S~V~ldeEmtnli~~Q~ 379 (402)
T 3a69_A 301 GNYSN-EQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQR 379 (402)
T ss_dssp EEETT-SCEEEEEEECEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCCC---------CHHHHHHHHHHHH
T ss_pred EEECC-CCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHH
T ss_conf 97356-54210011234566785773304796064355677730067887873148107545114799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999987159
Q gi|254780378|r 240 AYEMNSKVIEAADEMSSLITKMR 262 (262)
Q Consensus 240 ~ye~n~k~i~t~Dem~~~~~~lr 262 (262)
+||+|+|+|++.|||+++++|||
T Consensus 380 aY~A~akvitt~demld~linlk 402 (402)
T 3a69_A 380 NYQSNAQTIKTQDQILNTLVNLR 402 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99997526649999999997059
No 2
>1wlg_A Flagellar HOOK protein FLGE; EAR-& motif, structural protein; 1.80A {Salmonella typhimurium} SCOP: b.152.1.1 PDB: 2bgy_A 2bgz_A
Probab=100.00 E-value=3.1e-33 Score=220.19 Aligned_cols=135 Identities=34% Similarity=0.574 Sum_probs=119.9
Q ss_pred EEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC-----------------CCCCCC----------
Q ss_conf 21232377526531489857787521223525883414667610443-----------------101356----------
Q gi|254780378|r 94 LDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLVPG-----------------IVIPEE---------- 146 (262)
Q Consensus 94 lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl~~-----------------~~~p~~---------- 146 (262)
|||||+|+|||.|++++|+.+|||+|+|++|.+|+||+..|++|+++ +.+|..
T Consensus 2 LDlAI~G~GFFvV~~~~g~~~YTRaG~F~~D~~G~LVn~~G~~l~G~~~d~~~~~~~~~~~~~~i~i~~~~~~~~aTt~~ 81 (299)
T 1wlg_A 2 LDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTA 81 (299)
T ss_dssp EECCCSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCCEEEEEECBTTTTBCCTTCCCEECCCCCCCBCCBCCCEE
T ss_pred CCEEECCCCEEEEECCCCCEEEECCCCEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 66787688379987699988883488701989998884999989857636888621257755542134445577653147
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780378|r 147 -------------------------------------------------------------------------------- 146 (262)
Q Consensus 147 -------------------------------------------------------------------------------- 146 (262)
T Consensus 82 ~~~~NL~a~~~~~~~~~~~~~~~~t~~~~ts~~vyDs~G~~~~~~~~f~k~~~~~w~~~~~~~~~~~~~~~~~~~~~l~F 161 (299)
T 1wlg_A 82 SMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKF 161 (299)
T ss_dssp EEEEEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCCCCCSCSEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf 88612554335555555564666640115668987479953343588765046513899923787545466553058885
Q ss_pred --------------------------------------------------------CCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf --------------------------------------------------------532210133125521588654322
Q gi|254780378|r 147 --------------------------------------------------------TREIKVSRSGQILAVTGKNSDFQP 170 (262)
Q Consensus 147 --------------------------------------------------------~~~i~i~~dG~I~~~~~~~~~~~~ 170 (262)
...|.|++||.|.+.+. |+..+.
T Consensus 162 d~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tq~~~~~~~~~~~~dG~~~G~l~~~~i~~dG~i~~~ys-NG~~~~ 240 (299)
T 1wlg_A 162 NENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYS-NEQEQV 240 (299)
T ss_dssp CTTSBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEECCBCCBCEEEEEECTTCEEEEEET-TSCEEE
T ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEC-CCCEEE
T ss_conf 6776201144200023454665421100000000001367421455403884300431001079808999967-994788
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 21100000266200100688643346666552000246776206860730010234999
Q gi|254780378|r 171 VGQLLIANFINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVK 229 (262)
Q Consensus 171 i~~i~l~~f~n~~~L~~~g~~l~~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~ 229 (262)
++||+|++|.||+.|+++|+++|+++.+||++..+.|+..+.++|++|+||.||||+++
T Consensus 241 lgqiala~F~Np~gL~~~g~n~~~~t~~SG~~~~g~~g~~g~G~i~~g~LE~SNVDla~ 299 (299)
T 1wlg_A 241 LGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSK 299 (299)
T ss_dssp EEEECEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCSSCEEEEC------
T ss_pred EEEEEEEEECCHHHHHHCCCCEEECCCCCCCCEECCCCCCCCEEEEECCEEHHHCCCCC
T ss_conf 77999996079788330159618765667874324799888233852744223325268
No 3
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=70.19 E-value=4.8 Score=18.37 Aligned_cols=14 Identities=7% Similarity=0.183 Sum_probs=6.9
Q ss_pred CCEEEEEECCCCEE
Q ss_conf 52121232377526
Q gi|254780378|r 91 GNNLDLALVGRGWF 104 (262)
Q Consensus 91 g~~lD~Ai~G~Gff 104 (262)
..|.++|++.+|.+
T Consensus 121 ~~p~~i~v~~~g~i 134 (286)
T 1q7f_A 121 QHPRGVTVDNKGRI 134 (286)
T ss_dssp SCEEEEEECTTSCE
T ss_pred CCCCEEEEECCCCE
T ss_conf 89527999447977
No 4
>1ucu_A Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium} SCOP: e.32.1.1 PDB: 3a5x_A
Probab=47.21 E-value=12 Score=15.91 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 23499999999999999999999999999999998715
Q gi|254780378|r 224 NVDAVKEISEMISAQRAYEMNSKVIEAADEMSSLITKM 261 (262)
Q Consensus 224 NVd~~~Emv~lI~~qR~ye~n~k~i~t~Dem~~~~~~l 261 (262)
.+|.++||++|-..|=.+|+.+.|+..+.+.-+.+.+|
T Consensus 455 DaD~a~e~~~l~~~qi~~Qaa~~~laqAn~~~q~vl~L 492 (494)
T 1ucu_A 455 DSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSL 492 (494)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 14099999999999999999999999975267899984
No 5
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=42.62 E-value=9 Score=16.73 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=20.9
Q ss_pred CCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 75265314898577875212235258834146676104
Q gi|254780378|r 101 RGWFQVETPDKTVMYTRAGSFNIDSKGQLVTADGNTLV 138 (262)
Q Consensus 101 ~Gff~V~~~~G~~~yTR~G~f~~d~~G~Lvt~~G~~vl 138 (262)
+|||.|....+-.+.|.+|.+-+ .|.|.+..+...+
T Consensus 25 ~GlyeV~~~~~i~Y~~~dgkyli--~G~i~d~~~~~~~ 60 (216)
T 1eej_A 25 AGMKTVLTNSGVLYITDDGKHII--QGPMYDVSGTAPV 60 (216)
T ss_dssp TTEEEEEETTEEEEEETTSCEEE--ESCEEECSSSSCE
T ss_pred CCEEEEEECCEEEEECCCCCEEE--ECEEEECCCCCCC
T ss_conf 97399998998899839988898--4442643787732
No 6
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=41.83 E-value=15 Score=15.40 Aligned_cols=50 Identities=16% Similarity=0.357 Sum_probs=32.9
Q ss_pred CCCCEEEEEEC-------CCCEEEEECCCCCEEEEEEEEE-EECCCCCCCCCCCCCCCC
Q ss_conf 26521212323-------7752653148985778752122-352588341466761044
Q gi|254780378|r 89 HTGNNLDLALV-------GRGWFQVETPDKTVMYTRAGSF-NIDSKGQLVTADGNTLVP 139 (262)
Q Consensus 89 ~Tg~~lD~Ai~-------G~Gff~V~~~~G~~~yTR~G~f-~~d~~G~Lvt~~G~~vl~ 139 (262)
-+..+.+|.|. |++ |.|.+.+|++.|+=+|.+ .+...-.|.+.+|.+|+.
T Consensus 33 ~~~~~~~L~V~qK~~~~~g~~-f~V~D~~G~~vf~V~g~~~~~~~~~~l~D~~G~~l~~ 90 (217)
T 1zxu_A 33 CAPYPIDMAIVRKMMSLTDGN-FVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVT 90 (217)
T ss_dssp BCSSCEEEEEECC-----CCC-EEEEETTSCEEEEEECSSTTCCSEEEEECTTSCEEEE
T ss_pred CCCCCCEEEEEEEEEEECCCC-EEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEE
T ss_conf 457873899999887763897-5898589999999954466689879999899998999
No 7
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=37.38 E-value=17 Score=14.97 Aligned_cols=43 Identities=21% Similarity=0.377 Sum_probs=32.4
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCC
Q ss_conf 787332652121232377526531489857787521223525883
Q gi|254780378|r 84 QGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKGQ 128 (262)
Q Consensus 84 qG~l~~Tg~~lD~Ai~G~Gff~V~~~~G~~~yTR~G~f~~d~~G~ 128 (262)
.-+-..|.+.+.|.|+|+|=|.+- +|+...-+.|+|-+.+.+.
T Consensus 136 a~~HRH~~~AlrfvieG~G~~T~V--~Ge~~~~~~gD~~~tP~~~ 178 (394)
T 3bu7_A 136 AGAHRHAASALRFIMEGSGAYTIV--DGHKVELGANDFVLTPNGT 178 (394)
T ss_dssp CCCEEESSCEEEEEEECSCEEEEE--TTEEEEECTTCEEEECTTC
T ss_pred CCCCCCCHHHEEEEEECCCEEEEE--CCEEEEECCCCEEECCCCC
T ss_conf 752325551106799658526988--9989641189989669994
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=36.46 E-value=18 Score=14.88 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=24.5
Q ss_pred CCCCCCCCCEEEECCCCC-------CCCCCCCCCCEEECCCCCCCC---CCCCCCCCCCCCC
Q ss_conf 322101331255215886-------543222110000026620010---0688643346666
Q gi|254780378|r 148 REIKVSRSGQILAVTGKN-------SDFQPVGQLLIANFINEAGLR---NIGDNLLARTSVS 199 (262)
Q Consensus 148 ~~i~i~~dG~I~~~~~~~-------~~~~~i~~i~l~~f~n~~~L~---~~g~~l~~~~~~~ 199 (262)
..+.+|++|.|++....+ .+++.+.+|.+= ..++..+. +.++.||..+...
T Consensus 233 dG~~vD~~GnLWVA~~~~g~V~~~dp~G~~i~~i~lP-~~~~T~~~FgG~d~~~LyVTsa~~ 293 (326)
T 2ghs_A 233 DGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP-GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS-CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECC-CCCEEEEEEECCCCCEEEEEECCC
T ss_conf 8156879998999882898899998999599999899-996179898479999999995465
No 9
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=35.55 E-value=19 Score=14.80 Aligned_cols=17 Identities=18% Similarity=-0.093 Sum_probs=10.1
Q ss_pred CEEEEEECCCCEEEEEC
Q ss_conf 21212323775265314
Q gi|254780378|r 92 NNLDLALVGRGWFQVET 108 (262)
Q Consensus 92 ~~lD~Ai~G~Gff~V~~ 108 (262)
.|.|+|++.+|-.-|.+
T Consensus 138 ~p~diavD~~Gn~yV~d 154 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred CCCEEEECCCCCEEEEC
T ss_conf 76417897999999971
No 10
>1nig_A Hypothetical protein TA1238; structural genomics, four helixbundle, PSI, protein structure initiative; 2.00A {Thermoplasma acidophilum} SCOP: a.25.2.1
Probab=31.77 E-value=20 Score=14.63 Aligned_cols=19 Identities=26% Similarity=0.372 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 0010234999999999999
Q gi|254780378|r 220 LEASNVDAVKEISEMISAQ 238 (262)
Q Consensus 220 LE~SNVd~~~Emv~lI~~q 238 (262)
-|+++|.-++||.+++++-
T Consensus 39 SEg~kV~e~re~lDilDtl 57 (152)
T 1nig_A 39 SEGIKVRETREILDIIDTV 57 (152)
T ss_dssp HTCSSHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHH
T ss_conf 7225738999999999999
No 11
>1ory_B Flagellin; flagellar chaperone, cytosolic export chaperone, FLIS, FLIC; 2.45A {Aquifex aeolicus}
Probab=30.18 E-value=19 Score=14.71 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02349999999999999999999999999999999871
Q gi|254780378|r 223 SNVDAVKEISEMISAQRAYEMNSKVIEAADEMSSLITK 260 (262)
Q Consensus 223 SNVd~~~Emv~lI~~qR~ye~n~k~i~t~Dem~~~~~~ 260 (262)
..+|.+.||+++-..|=..|+...|+..+.++-+.+.+
T Consensus 15 ~DaD~A~E~~~lak~qIL~qa~~amLaQAN~~~q~vL~ 52 (55)
T 1ory_B 15 RNVDFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQ 52 (55)
T ss_dssp -CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 41559999999999999999999999998426789997
No 12
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=26.68 E-value=26 Score=13.88 Aligned_cols=14 Identities=0% Similarity=0.083 Sum_probs=8.1
Q ss_pred CCCCCCCCEEEECC
Q ss_conf 22101331255215
Q gi|254780378|r 149 EIKVSRSGQILAVT 162 (262)
Q Consensus 149 ~i~i~~dG~I~~~~ 162 (262)
.+.++++|.|++..
T Consensus 237 G~avD~dG~l~Va~ 250 (333)
T 2dg1_A 237 SCCIDSDDNLYVAM 250 (333)
T ss_dssp EEEEBTTCCEEEEE
T ss_pred CCEECCCCCEEEEE
T ss_conf 11398999999997
No 13
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=26.23 E-value=27 Score=13.83 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=4.7
Q ss_pred CCCCCCCEEEE
Q ss_conf 21013312552
Q gi|254780378|r 150 IKVSRSGQILA 160 (262)
Q Consensus 150 i~i~~dG~I~~ 160 (262)
+.++++|.|++
T Consensus 155 i~~d~~g~i~v 165 (270)
T 1rwi_B 155 VAVDNSGNVYV 165 (270)
T ss_dssp EEECTTCCEEE
T ss_pred EEECCCCCEEE
T ss_conf 79989998986
Done!