BLAST/PSIBLAST alignment of GI: 254780378 and GI: 209547928 at iteration 1
>gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 262
>gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 262
 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/260 (60%), Positives = 209/260 (80%), Gaps = 1/260 (0%)

Query: 1   MKAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADK 60
           M+A  IAA GM AQQTNLE+IANNIANINTTG+KRARAEF+D LYQ E+  G  ++ A++
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANR-ANQ 59

Query: 61  AVVPEGISIGSGVQISSVRNVYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGS 120
           AVVPEG +IG GVQ S+VRN++ QGE+  TGN+LD+AL+G+G+FQ+++ D T +YTRAG+
Sbjct: 60  AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGA 119

Query: 121 FNIDSKGQLVTADGNTLVPGIVIPEETREIKVSRSGQILAVTGKNSDFQPVGQLLIANFI 180
           FN + +GQLVT DG  ++PGI IP  + E+ +SRSGQ+ A     +D   +GQL +A+F+
Sbjct: 120 FNKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVSAKLPGAADATVLGQLTLADFV 179

Query: 181 NEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQRA 240
           NEAGL+ +GDNL   T+ SG+ ++ NPD+ GFA++KQGYLE+SNVD VKEI+E+ISAQRA
Sbjct: 180 NEAGLQPLGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRA 239

Query: 241 YEMNSKVIEAADEMSSLITK 260
           YEMNSKVI  ADEM+S+++K
Sbjct: 240 YEMNSKVITTADEMASIVSK 259