RPSBLAST alignment for GI: 254780378 and conserved domain: COG4787

>gnl|CDD|34398 COG4787, FlgF, Flagellar basal body rod protein [Cell motility and secretion]. Length = 251

 Score =  104 bits (261), Expect = 3e-23
 Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 11  MSAQQTNLE---IIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADKAVVPEGI 67
           M A    LE   + ANN+AN +TTG+   RA+              P+++   A  P   
Sbjct: 9   MGAASQLLEQQAVTANNLANASTTGF---RAQLNAARAVQVHGDSLPTRTFVMASTP--- 62

Query: 68  SIGSGVQISSVRNVYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGSFNIDSKG 127
               G  +S        G + +TG  LD+A+ G GW  V+  D +  YTR G+  ID+ G
Sbjct: 63  ----GTDMS-------PGSLDYTGRPLDVAIQGDGWLAVQDADGSEAYTRNGNIQIDATG 111

Query: 128 QLVTADGNTLVPG---IVIPEETREIKVSRSGQILAVTGKNSD--FQPVGQLLIANFINE 182
           QL T  G+ ++     I +P    ++ ++  G I A+   +       VG+L +      
Sbjct: 112 QL-TIQGHPVIGEGGPITVPPGA-KVTIAADGTISALNPGDPANTVAVVGRLKLVQ-ATG 168

Query: 183 AGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQRAYE 242
             ++   D L   T+ +  P            V  G LE SNV+AV+E+++MIS  R +E
Sbjct: 169 QEVQRGDDGLFRLTAETQQPRGQVLKADPSVRVMSGALEGSNVNAVEEMTDMISLARQFE 228

Query: 243 MNSKVIEAADEMS 255
           M  K+I  AD+ +
Sbjct: 229 MQMKMISTADDNA 241