HHsearch alignment for GI: 254780379 and conserved domain: COG1677

>COG1677 FliE Flagellar hook-basal body protein [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=99.92  E-value=8.1e-25  Score=166.84  Aligned_cols=72  Identities=28%  Similarity=0.417  Sum_probs=69.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             6659999999999999999999999999981489-89999999999999999999999999999999961889
Q gi|254780379|r   37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI  108 (108)
Q Consensus        37 ~~sF~~~L~~~i~~vn~~q~~a~~~~~~~~~G~~-dl~~vmia~~kA~lsl~~~vqVRnK~v~AYqeImrMqV  108 (108)
T Consensus        33 ~~sF~~~L~~ai~~vn~~Q~~a~~~~~~~~~G~~~~l~dVmia~~KAs~sLq~ai~VRnKlV~AYqEImrmqi  105 (105)
T COG1677          33 GASFAEVLKNAIDDVNDTQKKAEKASEAFILGQAGDLHDVMIAMQKASVSLQTAIQVRNKLVSAYQEIMRMQI  105 (105)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             3339999999999999999999999999984896409999999999999999999999999999999986769