BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780379|ref|YP_003064792.1| flagellar hook-basal body
protein FliE [Candidatus Liberibacter asiaticus str. psy62]
(108 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780379|ref|YP_003064792.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040056|gb|ACT56852.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
asiaticus str. psy62]
Length = 108
Score = 219 bits (559), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN
Sbjct: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI
Sbjct: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
>gi|315121848|ref|YP_004062337.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495250|gb|ADR51849.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 107
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 83/107 (77%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MIEQIQ T FI HT T+ M+ D Q++ E +S + FS+LLQDM + AIG ++KAE+
Sbjct: 1 MIEQIQRTEGFIPHTSTVEMQADSVQSAKEVSDASSVDFSSLLQDMVQEAIGKIKKAEDF 60
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
SL ALQGKTSMREA+D IMQAERTL +SIALRDKI+S+ E+SKMQI
Sbjct: 61 SLTALQGKTSMREAIDCIMQAERTLQVSIALRDKIVSSALEISKMQI 107
>gi|222084864|ref|YP_002543393.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
gi|254789304|sp|B9J966|FLIE_AGRRK RecName: Full=Flagellar hook-basal body complex protein FliE
gi|221722312|gb|ACM25468.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
Length = 116
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 34 GSSPI-SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
GSS + SF++++ D+AK + +++AEN S A ++G S RE VD +MQA++TL +IAL
Sbjct: 41 GSSAVGSFASVMSDVAKNTVSTLKEAENASFAGIKGTMSTREVVDKVMQADQTLQTAIAL 100
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA +++KMQI
Sbjct: 101 RDKMVSAFLDITKMQI 116
>gi|190890362|ref|YP_001976904.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
gi|226704239|sp|B3PPL9|FLIE_RHIE6 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|190695641|gb|ACE89726.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
Length = 113
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGVSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|86356311|ref|YP_468203.1| flagellar hook-basal body protein FliE [Rhizobium etli CFN 42]
gi|123513037|sp|Q2KCG0|FLIE_RHIEC RecName: Full=Flagellar hook-basal body complex protein FliE
gi|86280413|gb|ABC89476.1| flagellar hook-basal body protein [Rhizobium etli CFN 42]
Length = 113
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 56/76 (73%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF+++L MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGLSFASVLGGMASDAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|327193035|gb|EGE59947.1| flagellar hook-basal body protein FliE [Rhizobium etli CNPAF512]
Length = 113
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGMSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|241203105|ref|YP_002974201.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856995|gb|ACS54662.1| flagellar hook-basal body complex protein FliE [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 113
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGMSFASVMGNMASDAVSSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|209547927|ref|YP_002279844.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226704240|sp|B5ZQD7|FLIE_RHILW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|209533683|gb|ACI53618.1| flagellar hook-basal body complex protein FliE [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 113
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANNMSFASVMGNMASDAVSSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|218672514|ref|ZP_03522183.1| flagellar hook-basal body protein FliE [Rhizobium etli GR56]
Length = 113
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGMSFASVMGNMATEAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|116250481|ref|YP_766319.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255129|emb|CAK06203.1| putative flagellar hook-basal body complex protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 101
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 26 GAANGMSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 85
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 86 RDKVVSAFLEVTKMQM 101
>gi|218516083|ref|ZP_03512923.1| flagellar hook-basal body protein FliE [Rhizobium etli 8C-3]
Length = 113
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 57/76 (75%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ ++F++++ +MA A+ ++ AE++S A ++G + RE VD ++QAE+TL +IA+
Sbjct: 38 GAANGVNFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSMLQAEQTLQTAIAI 97
Query: 93 RDKILSAVSEVSKMQI 108
RDK++SA EV+KMQ+
Sbjct: 98 RDKVVSAFLEVTKMQM 113
>gi|115523178|ref|YP_780089.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisA53]
gi|115517125|gb|ABJ05109.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisA53]
Length = 106
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNE--EGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
+ +S S + D Q+++ G S + F +L+ +A AIG M+ E S+
Sbjct: 2 LDAVSSMTSSVSGVAKSSDVAQSASALAPTGGSAVGFDGVLEQVAADAIGSMKAGEAASI 61
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+++QGK S + V+ +M AERTL +++A+RDK++ A EVS+M I
Sbjct: 62 SSIQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106
>gi|325291940|ref|YP_004277804.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
gi|325059793|gb|ADY63484.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
Length = 111
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 7 QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
+GT++ S TD+I F + SF+++L +M+ A+ +++KAE S +
Sbjct: 15 RGTSNVSSLTDSI-----FGSQQTTPAQQTGASFASVLGNMSTDAMNNLKKAEVASFEGI 69
Query: 67 QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
QGK + RE VD ++ AE++L +IA RDKI+SA +++KMQI
Sbjct: 70 QGKANTREVVDAVLSAEQSLQTAIAFRDKIVSAYLDITKMQI 111
>gi|150395484|ref|YP_001325951.1| flagellar hook-basal body protein FliE [Sinorhizobium medicae
WSM419]
gi|166214856|sp|A6U636|FLIE_SINMW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|150026999|gb|ABR59116.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
medicae WSM419]
Length = 111
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F + T+ G + + G ++P SF+ +L +M AI ++
Sbjct: 1 MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE VSL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGVSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|15964414|ref|NP_384767.1| flagellar hook-basal body protein FliE [Sinorhizobium meliloti
1021]
gi|307311556|ref|ZP_07591197.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti BL225C]
gi|307318911|ref|ZP_07598342.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti AK83]
gi|17380479|sp|Q52945|FLIE_RHIME RecName: Full=Flagellar hook-basal body complex protein FliE
gi|15073591|emb|CAC45233.1| Flagellar hook-basal body complex protein [Sinorhizobium meliloti
1021]
gi|306895325|gb|EFN26080.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti AK83]
gi|306899573|gb|EFN30202.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti BL225C]
Length = 111
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F I T+ G + G ++P SF+ +L +M AI M+
Sbjct: 1 MIDAIQSVGAFSTIRETEGAGPAPSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE SL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|90422609|ref|YP_530979.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisB18]
gi|90104623|gb|ABD86660.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisB18]
Length = 106
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSN--EEGGSSPISFSALLQDMAKGAIGDMEKAE 59
M+E I +S +S + D ++++ + G+ I F +++ +A AIG ++ E
Sbjct: 1 MLETI---SSIVSSPGGLSKTTDVARSASALPQAGAPTIGFDGVMEQVAADAIGTLKAGE 57
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S++ +QGK S + V+ +M AERTL +++A+RDK++ A EVS+M I
Sbjct: 58 AASISGMQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106
>gi|110632657|ref|YP_672865.1| flagellar hook-basal body protein FliE [Mesorhizobium sp. BNC1]
gi|110283641|gb|ABG61700.1| flagellar hook-basal body complex protein FliE [Chelativorans sp.
BNC1]
Length = 102
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
+FSA++ ++A + + KAEN+SL ALQG R VD +M AE++L +IA+RDKI+S
Sbjct: 33 AFSAMVSELATNTVSRLTKAENLSLQALQGDGDTRAVVDAVMDAEQSLQAAIAIRDKIVS 92
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 93 AYLEISRMAI 102
>gi|2275160|gb|AAB81412.1| FliE [Sinorhizobium meliloti]
Length = 111
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F I T+ G + G ++P SF+ +L +M AI M+
Sbjct: 1 MIDAIQSVGAFSTIRETEGAGPASSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE SL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|227820857|ref|YP_002824827.1| flagellar hook-basal body protein FliE [Sinorhizobium fredii
NGR234]
gi|254789311|sp|C3MG23|FLIE_RHISN RecName: Full=Flagellar hook-basal body complex protein FliE
gi|227339856|gb|ACP24074.1| predicted flagellar hook-basal body complex protein FliE
[Sinorhizobium fredii NGR234]
Length = 111
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEK 57
MI+ IQ +F + + + + G S+P S F+ +L M AI M+
Sbjct: 1 MIDAIQSVGAFSNLKEAEGTSLTASTALSLPSAGASAPQSQSFAEVLGTMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE VSL A++G+ + RE VD +M AE++L ++A+RDK+++A E+++MQI
Sbjct: 61 AEGVSLQAIRGEANTREVVDAVMNAEQSLQTALAIRDKVVTAYLEIARMQI 111
>gi|15887899|ref|NP_353580.1| flagellar hook-basal body protein FliE [Agrobacterium tumefaciens
str. C58]
gi|3913678|sp|Q44337|FLIE_AGRT5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|1086560|gb|AAB68967.1| FliE [Agrobacterium tumefaciens]
gi|2459713|gb|AAB71789.1| FliE [Agrobacterium tumefaciens]
gi|15155491|gb|AAK86365.1| flagellar hook-basal body complex protein [Agrobacterium
tumefaciens str. C58]
Length = 112
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF+++L +++ A+ +++KAE S +QGK + RE VD ++ AE++L +IALRDKI+S
Sbjct: 43 SFASVLGNVSMDAMNNLKKAEVASFEGIQGKANTREVVDAVLSAEQSLQTAIALRDKIVS 102
Query: 99 AVSEVSKMQI 108
A +++KMQI
Sbjct: 103 AYLDITKMQI 112
>gi|296447439|ref|ZP_06889364.1| flagellar hook-basal body complex protein FliE [Methylosinus
trichosporium OB3b]
gi|296255059|gb|EFH02161.1| flagellar hook-basal body complex protein FliE [Methylosinus
trichosporium OB3b]
Length = 107
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SFS +L + A+ ++ +E S+AA+QGK S+++ VD +M AERTL +IA+RDK +
Sbjct: 38 SFSEVLGQLTTDAVDTLKSSEATSIAAVQGKASVQQVVDQVMTAERTLQTAIAVRDKAVG 97
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 98 AYQEISRMTI 107
>gi|163758014|ref|ZP_02165102.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
DFL-43]
gi|162284303|gb|EDQ34586.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
DFL-43]
Length = 114
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G S SFS ++Q + GA+ +++ AE SLAA++G+ R+ VD +M ER+L + A+
Sbjct: 39 GPQSSGSFSEVMQSLGVGAMNNLKAAEAQSLAAVRGEAVTRDVVDAVMAGERSLQTATAI 98
Query: 93 RDKILSAVSEVSKMQI 108
RDK+++A E+++MQI
Sbjct: 99 RDKLVTAYLEIARMQI 114
>gi|83309715|ref|YP_419979.1| flagellar hook-basal body protein FliE [Magnetospirillum magneticum
AMB-1]
gi|82944556|dbj|BAE49420.1| Flagellar hook-basal body protein [Magnetospirillum magneticum
AMB-1]
Length = 103
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
+ S EG + F+++L+D AK A+GD + AE S++A+ GK +RE V + AE TL
Sbjct: 24 KTSETEGNGT--DFASVLKDAAKVAVGDAKTAEKASMSAIAGKADIREVVAAVANAEMTL 81
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +RDK+++A +E+ +M I
Sbjct: 82 ETVVNVRDKVINAYNEILRMPI 103
>gi|222147570|ref|YP_002548527.1| flagellar hook-basal body protein FliE [Agrobacterium vitis S4]
gi|221734558|gb|ACM35521.1| flagellar hook-basal body complex protein [Agrobacterium vitis S4]
Length = 124
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
QN+ G ++ +SFS ++ + A+ +++ AE+ SL + GK S RE VD +M A+++L
Sbjct: 44 QNATP-GTATGMSFSDVVGGVMNDAMQNLKTAESNSLDGMLGKVSTREVVDSVMSAQKSL 102
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+IALRDK++SA +++KMQI
Sbjct: 103 QTAIALRDKLVSAFLDITKMQI 124
>gi|23016626|ref|ZP_00056380.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 103
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F+++L+D AK A+GD + AE S++A+ GK +RE V + AE TL + +RDK+++A
Sbjct: 35 FASVLKDAAKVAVGDAKSAEKASMSAIAGKADIREVVAAVANAEMTLETVVNVRDKVINA 94
Query: 100 VSEVSKMQI 108
+E+ +M I
Sbjct: 95 YNEILRMPI 103
>gi|319409188|emb|CBI82832.1| Flagellar hook-basal body complex protein fliE [Bartonella
schoenbuchensis R1]
Length = 114
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALR 93
SS +SFS +L ++ A ++ AE++S+ +L G +RE V+ +M+AER+L+ +IALR
Sbjct: 40 SSSVSFSKILSEVVGTAEMKLQNAESLSIGSLAGNDVGVREVVNSVMEAERSLSTAIALR 99
Query: 94 DKILSAVSEVSKMQI 108
DK++ A EVS+MQI
Sbjct: 100 DKMVQAYLEVSRMQI 114
>gi|319781682|ref|YP_004141158.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167570|gb|ADV11108.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 108
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 32 EGGSSP-------ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
+GG++P SF+ L A + M+ AE VS+ AL+G R+ VD +M A++
Sbjct: 25 QGGATPSAGGNVGTSFAEALSQAASKTVDTMQNAEQVSMQALKGDADTRQVVDAVMSAQQ 84
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L ++A+RDK++SA EVS+M I
Sbjct: 85 ALQTAVAIRDKVVSAYLEVSRMGI 108
>gi|118589982|ref|ZP_01547386.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
gi|118437479|gb|EAV44116.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
Length = 110
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 25 FTQNSNEEGGSSP---ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+T ++ + GG+ ISFS + ++ AI +++ E S+A + G+ S+++ V+ +M
Sbjct: 24 YTASTPDLGGTGSVGEISFSDAMAKVSTDAIDKIKQGEAASIAGVDGQASVQQVVEAVMA 83
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
AE TL +IA+RDK++SA E+S+M I
Sbjct: 84 AESTLQTAIAIRDKVVSAYQEISRMSI 110
>gi|254501297|ref|ZP_05113448.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
gi|222437368|gb|EEE44047.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
Length = 112
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 25 FTQNSNEEGGSSPIS---FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+ ++ E GG+ +S FS + ++++ AI ++ E ++A + G+ S+++ V+ +MQ
Sbjct: 26 YMNSTPELGGTEAVSGPSFSDAMAEVSQSAIDKVKNGEAAAIAGVDGQASVQQVVEAVMQ 85
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
AE TL +IA+RDK+++A E+S+M I
Sbjct: 86 AESTLQTAIAIRDKVVTAYQEISRMTI 112
>gi|260466620|ref|ZP_05812808.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
opportunistum WSM2075]
gi|259029626|gb|EEW30914.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
opportunistum WSM2075]
Length = 107
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 32 EGGSSP-------ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
+GG +P SF+ L A + M+ AE VS+ AL+G R+ VD +M A++
Sbjct: 24 QGGVAPAAPGNLGTSFAEALSQAASKTVSTMQNAEQVSMQALKGDADTRQVVDAVMSAQQ 83
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L ++A+RDK++SA EVS+M I
Sbjct: 84 ALQTAVAIRDKVVSAYLEVSRMGI 107
>gi|182680549|ref|YP_001834695.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636432|gb|ACB97206.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 114
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
FSA+L + A+ +++ AE S++ LQGK S+++ V+ +M A+++L +IA+RDK++SA
Sbjct: 46 FSAILSQVTNQAVDNLKTAEAASISGLQGKASVQQVVESMMTAQQSLQTAIAVRDKVVSA 105
Query: 100 VSEVSKMQI 108
+S+M I
Sbjct: 106 YQSISQMPI 114
>gi|323139653|ref|ZP_08074695.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
ATCC 49242]
gi|322395085|gb|EFX97644.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
ATCC 49242]
Length = 108
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +LQ A A+ ++ E +++ ++GK ++ + VD IM AER LN IALRDK ++
Sbjct: 39 SFGEVLQKFAADAVDSLKSGEAAAISGVEGKLAVHKVVDAIMSAERDLNTVIALRDKAVN 98
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 99 AYQEISRMAI 108
>gi|300024607|ref|YP_003757218.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526428|gb|ADJ24897.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
denitrificans ATCC 51888]
Length = 108
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 34 GSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
GS P SF+ L MA AI ++ E + A ++G+ S+++ V +M AE+TL +A+
Sbjct: 33 GSVPQASFADTLASMATDAISTIKAGETTATAGMKGQASLQQVVQAVMMAEQTLQTVVAV 92
Query: 93 RDKILSAVSEVSKMQI 108
RDK++ A E+S+MQI
Sbjct: 93 RDKVVGAYQEISRMQI 108
>gi|13472575|ref|NP_104142.1| flagellar hook-basal body protein FliE [Mesorhizobium loti
MAFF303099]
gi|38503149|sp|Q98HD8|FLIE_RHILO RecName: Full=Flagellar hook-basal body complex protein FliE
gi|14023321|dbj|BAB49928.1| flagellar hook-basal body protein; FleE [Mesorhizobium loti
MAFF303099]
Length = 107
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 32 EGGSSP-------ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
+GG +P SF+ + A + ++ AE VSL AL+G R+ VD +M A++
Sbjct: 24 QGGVAPATSGNLGTSFAEAVSQAASKTVNTLQNAEQVSLQALKGDADTRQVVDAVMSAQQ 83
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L ++A+RDK++SA EVS+M I
Sbjct: 84 ALQTAVAIRDKVVSAYLEVSRMGI 107
>gi|27381985|ref|NP_773514.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
USDA 110]
gi|38502984|sp|Q89F27|FLIE2_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 2
gi|27355155|dbj|BAC52139.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
USDA 110]
Length = 109
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ F ++++ + AIG ++ E S++A+QGK S R V+ +M AE+ L ++A+RDK++
Sbjct: 39 VGFDSVMKQVTTDAIGTLKAGEAASISAMQGKESTRRVVEALMSAEQALQTAVAVRDKVV 98
Query: 98 SAVSEVSKMQI 108
A EV +M I
Sbjct: 99 QAYQEVVRMSI 109
>gi|254473498|ref|ZP_05086895.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
gi|211957614|gb|EEA92817.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
Length = 118
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF+ + D+ + GD++ AE S+AA++G+ S ++ V+ +M+AE +L ++A+RDK++
Sbjct: 49 SFADTMADVVRETAGDLKTAEATSVAAVRGEVSAQKVVEAVMKAELSLKSAVAVRDKVVE 108
Query: 99 AVSEVSKMQI 108
A E S+M I
Sbjct: 109 AYQEFSRMSI 118
>gi|158422259|ref|YP_001523551.1| flagellar hook-basal body protein FliE [Azorhizobium caulinodans
ORS 571]
gi|158329148|dbj|BAF86633.1| flagellar hook-basal body complex protein [Azorhizobium caulinodans
ORS 571]
Length = 109
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F +L + A+ + + E +AA+QGK S+++ V+ +M AE+TL +IA+RDK+++A
Sbjct: 41 FGDVLASVTTDAMKTVRQGEAAGIAAIQGKASIQQVVEAVMSAEQTLQTAIAVRDKVVAA 100
Query: 100 VSEVSKMQI 108
EVS+M I
Sbjct: 101 YQEVSRMAI 109
>gi|170741835|ref|YP_001770490.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
gi|168196109|gb|ACA18056.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
Length = 112
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 2 MIEQIQGTNSFISHTDTI------GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
MIE + N+ I T + G+ + + P +F ++ +A G +
Sbjct: 1 MIEAVASLNALIDRTGPVSGPSSAGLLQGVLSPAPTAIPTGP-AFGDVMAQIASGMRDTL 59
Query: 56 EKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E ++A LQGK S ++ V+ ++ AE++L +IA+RDK+++A E+S+M I
Sbjct: 60 RAGEATAIAGLQGKASAQQVVEAVLSAEQSLQTTIAIRDKVVAAYLEISRMAI 112
>gi|328545506|ref|YP_004305615.1| flagellar hook-basal body complex protein FliE [polymorphum gilvum
SL003B-26A1]
gi|326415247|gb|ADZ72310.1| Flagellar hook-basal body complex protein FliE [Polymorphum gilvum
SL003B-26A1]
Length = 107
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SFS L ++ AI ++ E +L+ +QGK S ++ V+ +M AE +L +IA+RDK++S
Sbjct: 38 SFSDTLASVSMEAIERLKGGEAAALSGIQGKVSAQQVVEAVMAAEASLQTAIAIRDKVVS 97
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 98 AYQEISRMTI 107
>gi|319405400|emb|CBI79019.1| Flagellar hook-basal body complex protein fliE [Bartonella sp. AR
15-3]
Length = 114
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKI 96
+SF +L ++ + ++ AE++S+ + G +RE V+ +M AER+L+ +IALRDK+
Sbjct: 43 VSFDQVLSEIVEVVGTKLQTAESLSIGRISGNDVGVREVVNSVMAAERSLSTAIALRDKL 102
Query: 97 LSAVSEVSKMQI 108
+ A EVS+MQI
Sbjct: 103 VQAYLEVSRMQI 114
>gi|319406975|emb|CBI80612.1| Flagellar hook-basal body complex protein fliE [Bartonella sp.
1-1C]
Length = 112
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKI 96
+SF +L ++ + ++ AE++S+ + G +RE V+ +M+AER+L+ +IALRDK+
Sbjct: 41 VSFDQVLSEVVEVVGTKLQTAESLSIDRISGSDVGVREVVNSVMEAERSLSTAIALRDKL 100
Query: 97 LSAVSEVSKMQI 108
+ A EVS+MQI
Sbjct: 101 VQAYLEVSRMQI 112
>gi|319403960|emb|CBI77548.1| Flagellar hook-basal body complex protein fliE [Bartonella
rochalimae ATCC BAA-1498]
Length = 112
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKI 96
+SF +L ++ + ++ AE++S+ + G +RE V+ +M+AER+L+ +IALRDK+
Sbjct: 41 VSFDQVLSEVVEVVGTKLQTAESLSIDRISGSDVGVREVVNSVMEAERSLSTAIALRDKL 100
Query: 97 LSAVSEVSKMQI 108
+ A EVS+MQI
Sbjct: 101 VQAYLEVSRMQI 112
>gi|83944176|ref|ZP_00956632.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
gi|83845043|gb|EAP82924.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
Length = 105
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+ G +P F+ ++ D A A+ + + + +++ L G+ S++E V M E+T+ +S+
Sbjct: 28 KPAGPAPKDFAQMVGDAASQAVDSVREGDQMAIKGLTGQASLQEVVQATMAMEQTVQVSV 87
Query: 91 ALRDKILSAVSEVSKMQI 108
ALRDK++ A EV +M +
Sbjct: 88 ALRDKLVEAYQEVMRMPV 105
>gi|121601933|ref|YP_989401.1| flagellar hook-basal body complex protein FliE [Bartonella
bacilliformis KC583]
gi|120614110|gb|ABM44711.1| flagellar hook-basal body complex protein FliE [Bartonella
bacilliformis KC583]
Length = 110
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIAL 92
G++ SF +L + + ++KAE++S+ + G +RE V +M+AE++L+ +IAL
Sbjct: 35 GANTASFDQVLAKITESVGTKLQKAESLSMGKISGNDIGVREIVSSVMEAEQSLSTAIAL 94
Query: 93 RDKILSAVSEVSKMQI 108
RDK++ A EVS+MQI
Sbjct: 95 RDKMVQAYLEVSRMQI 110
>gi|319898636|ref|YP_004158729.1| flagellar hook-basal body complex protein fliE [Bartonella
clarridgeiae 73]
gi|319402600|emb|CBI76145.1| Flagellar hook-basal body complex protein fliE [Bartonella
clarridgeiae 73]
Length = 126
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 55 MEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ AE++S+ + G +RE V+ +M+AER+L+++IALRDK++ A EVS+MQI
Sbjct: 72 LQTAESLSIGRISGSDVGVREVVNSVMEAERSLSIAIALRDKLVQAYLEVSRMQI 126
>gi|83955123|ref|ZP_00963779.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
gi|83840452|gb|EAP79625.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
Length = 105
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+ G +P F+ ++ D A A+ + + + +++ L G+ S++E V M E+T+ +S+
Sbjct: 28 KPAGPAPKDFAQMVGDAASQAVESVREGDQMAIKGLTGQASLQEVVQATMAMEQTVQVSV 87
Query: 91 ALRDKILSAVSEVSKMQI 108
ALRDK++ A EV +M +
Sbjct: 88 ALRDKLVEAYQEVMRMPV 105
>gi|239834443|ref|ZP_04682771.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
LMG 3301]
gi|239822506|gb|EEQ94075.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
LMG 3301]
Length = 111
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M +E AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTDSVGQKLEAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|114706770|ref|ZP_01439670.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
HTCC2506]
gi|114537718|gb|EAU40842.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
HTCC2506]
Length = 108
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
FS +L + A ++ AE S+ + GK S + V+ +M AERTL ++A+RDK ++A
Sbjct: 40 FSEVLSRVMVDAADTVKTAEATSIQGVNGKASTQAVVEAVMSAERTLQTAVAVRDKAVAA 99
Query: 100 VSEVSKMQI 108
E+S+MQI
Sbjct: 100 YMELSRMQI 108
>gi|312115250|ref|YP_004012846.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
vannielii ATCC 17100]
gi|311220379|gb|ADP71747.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
vannielii ATCC 17100]
Length = 102
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
+ G++ FS++L + + D++ E+V+ A LQG+ S +E V + +AE +L
Sbjct: 21 EKKTASAGAATTDFSSVLAALGQQTAVDVKAGESVAAAGLQGRASTQEVVQAVSKAELSL 80
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
++A+RDK +SA E+++M I
Sbjct: 81 QAALAVRDKAVSAYQELTRMTI 102
>gi|256111944|ref|ZP_05452895.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 3
str. Ether]
gi|265993391|ref|ZP_06105948.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 3 str. Ether]
gi|262764261|gb|EEZ10293.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 3 str. Ether]
Length = 111
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFCEVLSQMTGSVSQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|209963542|ref|YP_002296457.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
gi|209957008|gb|ACI97644.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
Length = 104
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERT 85
T + E G SF+ ++ K AI + E +S A LQGK S +E V +M AE T
Sbjct: 27 TATAPERG-----SFAGFVETAVKSAIKTVRTGEEMSAAGLQGKASAQEVVQAVMSAEMT 81
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ + +RDK++SA ++ +M I
Sbjct: 82 VQAVVTVRDKLVSAYLDIMRMGI 104
>gi|256059609|ref|ZP_05449807.1| flagellar hook-basal body protein FliE [Brucella neotomae 5K33]
gi|261323578|ref|ZP_05962775.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
5K33]
gi|261299558|gb|EEY03055.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
5K33]
Length = 111
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTGSVSQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|153011525|ref|YP_001372739.1| flagellar hook-basal body protein FliE [Ochrobactrum anthropi ATCC
49188]
gi|166214852|sp|A6X6Q6|FLIE_OCHA4 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|151563413|gb|ABS16910.1| flagellar hook-basal body complex protein FliE [Ochrobactrum
anthropi ATCC 49188]
Length = 111
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTDSVGQKLQTAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|254720611|ref|ZP_05182422.1| flagellar hook-basal body protein FliE [Brucella sp. 83/13]
gi|265985651|ref|ZP_06098386.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
gi|306838573|ref|ZP_07471410.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
gi|264664243|gb|EEZ34504.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
gi|306406359|gb|EFM62601.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
Length = 111
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTDSVGQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|306846279|ref|ZP_07478840.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
gi|306273274|gb|EFM55143.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
Length = 111
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTDSVGQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|17989432|ref|NP_542065.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
str. 16M]
gi|23499915|ref|NP_699355.1| flagellar hook-basal body protein FliE [Brucella suis 1330]
gi|62317102|ref|YP_222955.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 1 str.
9-941]
gi|83269094|ref|YP_418385.1| flagellar hook-basal body protein FliE [Brucella melitensis biovar
Abortus 2308]
gi|161620235|ref|YP_001594121.1| flagellar hook-basal body protein FliE [Brucella canis ATCC 23365]
gi|163844345|ref|YP_001622000.1| flagellar hook-basal body protein FliE [Brucella suis ATCC 23445]
gi|189022367|ref|YP_001932108.1| flagellar hook-basal body protein FliE [Brucella abortus S19]
gi|225628624|ref|ZP_03786658.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
gi|225686011|ref|YP_002733983.1| flagellar hook-basal body protein FliE [Brucella melitensis ATCC
23457]
gi|237816664|ref|ZP_04595656.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
A]
gi|254691413|ref|ZP_05154667.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 6 str.
870]
gi|254695289|ref|ZP_05157117.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 3 str.
Tulya]
gi|254698387|ref|ZP_05160215.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 2 str.
86/8/59]
gi|254699460|ref|ZP_05161288.1| flagellar hook-basal body protein FliE [Brucella suis bv. 5 str.
513]
gi|254702575|ref|ZP_05164403.1| flagellar hook-basal body protein FliE [Brucella suis bv. 3 str.
686]
gi|254706293|ref|ZP_05168121.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
M163/99/10]
gi|254711413|ref|ZP_05173224.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
B2/94]
gi|254712012|ref|ZP_05173823.1| flagellar hook-basal body protein FliE [Brucella ceti M644/93/1]
gi|254715081|ref|ZP_05176892.1| flagellar hook-basal body protein FliE [Brucella ceti M13/05/1]
gi|254731832|ref|ZP_05190410.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 4 str.
292]
gi|256014941|ref|YP_003104950.1| flagellar basal body protein [Brucella microti CCM 4915]
gi|256029957|ref|ZP_05443571.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
M292/94/1]
gi|256043072|ref|ZP_05446016.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
str. Rev.1]
gi|256158119|ref|ZP_05456037.1| flagellar hook-basal body protein FliE [Brucella ceti M490/95/1]
gi|256252927|ref|ZP_05458463.1| flagellar hook-basal body protein FliE [Brucella ceti B1/94]
gi|256256599|ref|ZP_05462135.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 9 str.
C68]
gi|256262866|ref|ZP_05465398.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 2 str. 63/9]
gi|260544340|ref|ZP_05820161.1| flagellar hook-basal body complex protein fliE [Brucella abortus
NCTC 8038]
gi|260564302|ref|ZP_05834787.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. 16M]
gi|260568517|ref|ZP_05838986.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
str. 40]
gi|260757027|ref|ZP_05869375.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 6 str. 870]
gi|260759601|ref|ZP_05871949.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 4 str. 292]
gi|260762845|ref|ZP_05875177.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 2 str. 86/8/59]
gi|260882837|ref|ZP_05894451.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 9 str. C68]
gi|261215658|ref|ZP_05929939.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 3 str. Tulya]
gi|261216791|ref|ZP_05931072.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M13/05/1]
gi|261220018|ref|ZP_05934299.1| flagellar hook-basal body complex protein fliE [Brucella ceti
B1/94]
gi|261313737|ref|ZP_05952934.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M163/99/10]
gi|261319021|ref|ZP_05958218.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis B2/94]
gi|261319658|ref|ZP_05958855.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M644/93/1]
gi|261749911|ref|ZP_05993620.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
str. 513]
gi|261753155|ref|ZP_05996864.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
str. 686]
gi|265986976|ref|ZP_06099533.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M292/94/1]
gi|265989510|ref|ZP_06102067.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. Rev.1]
gi|265996636|ref|ZP_06109193.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M490/95/1]
gi|294853174|ref|ZP_06793846.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
07-0026]
gi|297249955|ref|ZP_06933656.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 5 str. B3196]
gi|54037112|sp|P67707|FLIE_BRUSU RecName: Full=Flagellar hook-basal body complex protein FliE
gi|54041063|sp|P67706|FLIE_BRUME RecName: Full=Flagellar hook-basal body complex protein FliE
gi|75495902|sp|Q579U0|FLIE_BRUAB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|123545537|sp|Q2YJ71|FLIE_BRUA2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189044491|sp|A9MDR2|FLIE_BRUC2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189044492|sp|A9WXL2|FLIE_BRUSI RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704222|sp|B2SCV8|FLIE_BRUA1 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|254789305|sp|C0RK96|FLIE_BRUMB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|17985309|gb|AAL54329.1| flagellar hook-basal body complex protein flie [Brucella melitensis
bv. 1 str. 16M]
gi|23463492|gb|AAN33360.1| flagellar hook-basal body complex protein FliE [Brucella suis 1330]
gi|62197295|gb|AAX75594.1| FliE, flagellar hook-basal body complex protein [Brucella abortus
bv. 1 str. 9-941]
gi|82939368|emb|CAJ12316.1| Flagellar hook-basal body complex protein FliE [Brucella melitensis
biovar Abortus 2308]
gi|161337046|gb|ABX63350.1| Hypothetical protein BCAN_B0154 [Brucella canis ATCC 23365]
gi|163675068|gb|ABY39178.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020941|gb|ACD73662.1| Flagellar hook-basal body complex protein FliE [Brucella abortus
S19]
gi|225616470|gb|EEH13518.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
gi|225642116|gb|ACO02029.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|237787477|gb|EEP61693.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
A]
gi|255997601|gb|ACU49288.1| flagellar basal body protein [Brucella microti CCM 4915]
gi|260097611|gb|EEW81485.1| flagellar hook-basal body complex protein fliE [Brucella abortus
NCTC 8038]
gi|260151945|gb|EEW87038.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. 16M]
gi|260155182|gb|EEW90263.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
str. 40]
gi|260669919|gb|EEX56859.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 4 str. 292]
gi|260673266|gb|EEX60087.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 2 str. 86/8/59]
gi|260677135|gb|EEX63956.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 6 str. 870]
gi|260872365|gb|EEX79434.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 9 str. C68]
gi|260917265|gb|EEX84126.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 3 str. Tulya]
gi|260918602|gb|EEX85255.1| flagellar hook-basal body complex protein fliE [Brucella ceti
B1/94]
gi|260921880|gb|EEX88448.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M13/05/1]
gi|261292348|gb|EEX95844.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M644/93/1]
gi|261298244|gb|EEY01741.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis B2/94]
gi|261302763|gb|EEY06260.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M163/99/10]
gi|261739664|gb|EEY27590.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
str. 513]
gi|261742908|gb|EEY30834.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
str. 686]
gi|262550933|gb|EEZ07094.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M490/95/1]
gi|263000179|gb|EEZ12869.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. Rev.1]
gi|263092701|gb|EEZ16910.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 2 str. 63/9]
gi|264659173|gb|EEZ29434.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M292/94/1]
gi|294818829|gb|EFG35829.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
07-0026]
gi|297173824|gb|EFH33188.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 5 str. B3196]
gi|326410334|gb|ADZ67398.1| flagellar hook-basal body protein FliE [Brucella melitensis M28]
gi|326553626|gb|ADZ88265.1| flagellar hook-basal body protein FliE [Brucella melitensis M5-90]
Length = 111
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTGSVSQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|306841050|ref|ZP_07473774.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
gi|306288939|gb|EFM60239.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
Length = 111
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L +IA+RDKI+
Sbjct: 42 SFGEVLSQMTDSVGQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|304392507|ref|ZP_07374447.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
R2A130]
gi|303295137|gb|EFL89497.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
R2A130]
Length = 103
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
ISF+ +L A+ + AE ++ + G+T +R+ D +M+AER++ ++ +RDKI+
Sbjct: 33 ISFAEMLGSQAQNLSNGLHGAEAIAAQGMTGETGIRQVADAVMEAERSMQAAVVVRDKIV 92
Query: 98 SAVSEVSKMQI 108
+A ++S+M I
Sbjct: 93 AAWLDISRMAI 103
>gi|217976224|ref|YP_002360371.1| flagellar hook-basal body complex protein FliE [Methylocella
silvestris BL2]
gi|217501600|gb|ACK49009.1| flagellar hook-basal body complex protein FliE [Methylocella
silvestris BL2]
Length = 104
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 45/69 (65%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F +L ++ A+ ++ E ++ L+GK S+++ V+ +M AE++L+ +IA+RDK +SA
Sbjct: 36 FGHVLAQVSSDAVNSLKTGEATAILGLEGKASVQQVVESVMSAEQSLHTAIAIRDKAVSA 95
Query: 100 VSEVSKMQI 108
+S+M I
Sbjct: 96 YQSISQMAI 104
>gi|148558234|ref|YP_001257212.1| flagellar hook-basal body protein FliE [Brucella ovis ATCC 25840]
gi|166214843|sp|A5VTQ7|FLIE_BRUO2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|148369519|gb|ABQ62391.1| flagellar hook-basal body complex protein FliE [Brucella ovis ATCC
25840]
Length = 111
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L M ++ AE S+ ++G +R+ V +M+AE++L IA+RDKI+
Sbjct: 42 SFGEVLSQMTGSVSQKLQAAEATSIQGIKGDAPVRDVVSSVMEAEQSLQTVIAIRDKIVQ 101
Query: 99 AVSEVSKMQI 108
A E+S+M I
Sbjct: 102 AYLEISRMPI 111
>gi|163850062|ref|YP_001638105.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens PA1]
gi|218528665|ref|YP_002419481.1| flagellar hook-basal body complex protein FliE [Methylobacterium
chloromethanicum CM4]
gi|240137196|ref|YP_002961665.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|163661667|gb|ABY29034.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens PA1]
gi|218520968|gb|ACK81553.1| flagellar hook-basal body complex protein FliE [Methylobacterium
chloromethanicum CM4]
gi|240007162|gb|ACS38388.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
Length = 117
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
++P F ++ +A A + E +++ +QGK + ++ V+ +M AE++L +A+RD
Sbjct: 44 TAPTDFGEVMAQVASSARDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRD 103
Query: 95 KILSAVSEVSKMQI 108
K+++A E+S+M I
Sbjct: 104 KVVAAYLELSRMPI 117
>gi|288958049|ref|YP_003448390.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
gi|288910357|dbj|BAI71846.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
Length = 99
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF +L+ AK +IG ++K+E++S A GK + + V + AE TL A+RDK+L+
Sbjct: 30 SFGDVLEQAAKESIGTLKKSEDMSALATVGKADLNDVVQAVTNAEVTLQTVTAVRDKVLN 89
Query: 99 AVSEVSKMQI 108
A E+ +M +
Sbjct: 90 AYQEILRMPM 99
>gi|188579866|ref|YP_001923311.1| flagellar hook-basal body complex protein FliE [Methylobacterium
populi BJ001]
gi|179343364|gb|ACB78776.1| flagellar hook-basal body complex protein FliE [Methylobacterium
populi BJ001]
Length = 117
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
S+P F ++ +A A + E +++ +QGK + ++ V+ +M AE++L +A+RD
Sbjct: 44 SAPTDFGDVMAQVAASARDAIRGGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRD 103
Query: 95 KILSAVSEVSKMQI 108
K+++A E+S+M I
Sbjct: 104 KVVAAYLELSRMPI 117
>gi|254559208|ref|YP_003066303.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
gi|254266486|emb|CAX22250.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
Length = 117
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
++P F ++ +A A + E +++ +QGK + ++ V+ +M AE++L +A+RD
Sbjct: 44 TAPTDFGEVMAQVASSARDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVLAIRD 103
Query: 95 KILSAVSEVSKMQI 108
K+++A E+S+M I
Sbjct: 104 KVVAAYLELSRMPI 117
>gi|163744320|ref|ZP_02151680.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
indolifex HEL-45]
gi|161381138|gb|EDQ05547.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
indolifex HEL-45]
Length = 110
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 48/78 (61%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
EE G+S SF+ L+Q ++ A+ + E V+ A L+G+ ++ V+ ++ E T+ +++
Sbjct: 33 EEAGASANSFTNLVQQASESALETVRGGEAVAQAGLRGEADTQQVVEAMLAMESTVKVAV 92
Query: 91 ALRDKILSAVSEVSKMQI 108
++RD+ + A E+ +M I
Sbjct: 93 SVRDRFVEAYQEILRMPI 110
>gi|23008563|ref|ZP_00049956.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 116
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F ++ +A A + E ++A +QG+ + ++ V+ +M AE++L +A+RDK+++A
Sbjct: 48 FGDVMAQVAASARDALRGGEATAIAGIQGRATAQQVVEAVMSAEQSLQTVVAIRDKVVAA 107
Query: 100 VSEVSKMQI 108
E+S+M I
Sbjct: 108 YLELSRMPI 116
>gi|170748108|ref|YP_001754368.1| flagellar hook-basal body complex protein FliE [Methylobacterium
radiotolerans JCM 2831]
gi|170654630|gb|ACB23685.1| flagellar hook-basal body complex protein FliE [Methylobacterium
radiotolerans JCM 2831]
Length = 110
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 37/54 (68%)
Query: 55 MEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ E +++ +QGK S + V+ +M AE++L ++A+RDK+++A E+ +M I
Sbjct: 57 VKTGEAAAISGIQGKASTQAVVEAVMSAEQSLQTAVAIRDKVVAAYLEIVRMAI 110
>gi|288962708|ref|YP_003453002.1| FliE protein [Azospirillum sp. B510]
gi|288914974|dbj|BAI76458.1| FliE protein [Azospirillum sp. B510]
Length = 119
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F L A+ ++++E VSLAA+ GK S ++ V ++ AE T+ +A+RDK++ A
Sbjct: 51 FGGFLDKSISQAVDTLKESERVSLAAVSGKASAQDVVRSVLAAEMTVQSVVAIRDKMVQA 110
Query: 100 VSEVSKMQI 108
E+ ++ +
Sbjct: 111 YQEIMRIAV 119
>gi|163794132|ref|ZP_02188105.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
gi|159180746|gb|EDP65265.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
Length = 98
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F+ ++D A AI + + E+VS + GK + + V + AE TL LRDK++SA
Sbjct: 30 FANYVRDAASEAIDSLHRGEDVSKEGIAGKADLTDVVAAVNDAELTLQTVTTLRDKLVSA 89
Query: 100 VSEVSKMQI 108
E+ ++ I
Sbjct: 90 YQEILRIPI 98
>gi|89068703|ref|ZP_01156089.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
gi|89045666|gb|EAR51728.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
Length = 109
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
+ P SFS+ +Q A A+G + +A+ A + G+ + V+ + E T+ +++++R
Sbjct: 35 AAKPDSFSSFVQTAATDAVGTVREADAAMKAGVTGEMDTQAVVEATLALESTVKVAVSVR 94
Query: 94 DKILSAVSEVSKMQI 108
DK++ A +V +M I
Sbjct: 95 DKVVEAYQQVMQMPI 109
>gi|147678425|ref|YP_001212640.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
SI]
gi|146274522|dbj|BAF60271.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
SI]
Length = 95
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER-TLNL 88
E GGSS FS +LQD K KA+N++ L G+ V MQ R T+ L
Sbjct: 19 QEAGGSS---FSEMLQDALKKVNDAQVKADNLARQLLTGEVQDIHQVTVAMQEARLTMQL 75
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ +R+KI+ A E+S+MQ+
Sbjct: 76 AVEVRNKIIEAYQEISRMQV 95
>gi|144900467|emb|CAM77331.1| flagellar hook-basal body complex protein FliE [Magnetospirillum
gryphiswaldense MSR-1]
Length = 105
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F+++L+D AK ++ +++ E S AA+ GK +RE V + AE TL + +RDK+++A
Sbjct: 37 FASVLKDAAKMSLNAVKQGEQASAAAIAGKADIREVVAAVNNAEMTLETVVTVRDKVINA 96
Query: 100 VSEVSKMQI 108
+E+ +M I
Sbjct: 97 YNEILRMPI 105
>gi|83594156|ref|YP_427908.1| flagellar hook-basal body protein FliE [Rhodospirillum rubrum ATCC
11170]
gi|83577070|gb|ABC23621.1| Flagellar hook-basal body complex protein FliE [Rhodospirillum
rubrum ATCC 11170]
Length = 106
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 47 MAKGAIGDM----EKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSE 102
M KGAI D + E S A++GK +R+ V + AE TL +A+RDK+++A
Sbjct: 41 MVKGAIDDTITAGRQGEAQSRLAIEGKADLRDVVMAVNNAESTLQTVVAVRDKVVNAYET 100
Query: 103 VSKMQI 108
+ +M I
Sbjct: 101 ILRMPI 106
>gi|209964220|ref|YP_002297135.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
gi|209957686|gb|ACI98322.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
Length = 102
Score = 40.8 bits (94), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF LL+ A+ +I M+ E S+ + GK + + V + AE TL + +RD++++
Sbjct: 33 SFGDLLRHAAEESIDTMKLGEQKSIEGIVGKADLADVVTAVSNAEVTLQAVVNVRDRVIT 92
Query: 99 AVSEVSKMQI 108
A E+ +M I
Sbjct: 93 AYQEILRMPI 102
>gi|206890164|ref|YP_002248114.1| flagellar hook-basal body complex protein (FliE)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742102|gb|ACI21159.1| flagellar hook-basal body complex protein (FliE)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 97
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
Q+ E G+ SF L+D K A ++A+N A +G+ S+ + V + +A+ TL
Sbjct: 16 QDLKELQGTQKESFEQALKDAIKEASQVEQEAQNAIEAFSKGELSIHQVVLAMEKADMTL 75
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
I +R+K+L+A E+S+MQ+
Sbjct: 76 QTLIQVRNKVLTAYEEISRMQV 97
>gi|163852026|ref|YP_001640069.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
extorquens PA1]
gi|218530780|ref|YP_002421596.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
chloromethanicum CM4]
gi|240139293|ref|YP_002963768.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|254561749|ref|YP_003068844.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
gi|163663631|gb|ABY30998.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
extorquens PA1]
gi|218523083|gb|ACK83668.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
chloromethanicum CM4]
gi|240009265|gb|ACS40491.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|254269027|emb|CAX24988.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
Length = 107
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIA 91
+G ++P F+ LQ +A+ +L+A GK ++ + V + ++E L +A
Sbjct: 31 QGLTAPGGFTGFLQQSLDNVAQSGAQADRAALSAATGKANVVDVVTAVAESETALQTLVA 90
Query: 92 LRDKILSAVSEVSKMQI 108
+RD+++SA E+ +M I
Sbjct: 91 VRDRVISAYEEIMRMPI 107
>gi|148380621|ref|YP_001255162.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. ATCC 3502]
gi|153932224|ref|YP_001384907.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
str. ATCC 19397]
gi|153936171|ref|YP_001388376.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
str. Hall]
gi|148290105|emb|CAL84224.1| flagellar hook-basal body complex protein [Clostridium botulinum A
str. ATCC 3502]
gi|152928268|gb|ABS33768.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. ATCC 19397]
gi|152932085|gb|ABS37584.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. Hall]
Length = 104
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + +SFS +L+D G KA+N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTKSVSFSEILKDKLDGVNAKQVKADNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G +T + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDETDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|168180912|ref|ZP_02615576.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum NCTC 2916]
gi|182668256|gb|EDT80235.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum NCTC 2916]
gi|322806994|emb|CBZ04564.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum H04402 065]
Length = 104
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + +SFS +L+D G KA+N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G +T + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDETDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|188581883|ref|YP_001925328.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
populi BJ001]
gi|179345381|gb|ACB80793.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
populi BJ001]
Length = 106
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIA 91
+G ++P F+ LQ +A+ +L+A GK ++ + V + ++E L +A
Sbjct: 30 QGLTAPGGFTGFLQQSLDSVAQSGAQADRAALSAATGKANVVDVVTAVAESETALQTLVA 89
Query: 92 LRDKILSAVSEVSKMQI 108
+RD+++SA E+ +M I
Sbjct: 90 VRDRVISAYEEIMRMPI 106
>gi|296534149|ref|ZP_06896645.1| flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
gi|296265525|gb|EFH11654.1| flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
Length = 106
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF A+L+ + + A+ S+ L+G+ E V + +AE L ++A+RD+++S
Sbjct: 37 SFGAMLERAVEKVVDTTRAADVASVQGLRGEVGATEVVLAVSRAELALQTTVAVRDRVVS 96
Query: 99 AVSEVSKMQI 108
A EV +M +
Sbjct: 97 AYQEVMRMSL 106
>gi|197104392|ref|YP_002129769.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
zucineum HLK1]
gi|196477812|gb|ACG77340.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
zucineum HLK1]
Length = 103
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIA 91
E G+ P F +L+ AI +AE A +QGK + + V I AE +L +A
Sbjct: 28 EPGAGP-GFGEILKAAMGDAIQASRQAETQMAAQVQGKAELVDVVTAISAAEASLETVLA 86
Query: 92 LRDKILSAVSEVSKMQI 108
+RD+++SA E+ +M I
Sbjct: 87 VRDQVISAYKEILQMPI 103
>gi|315498434|ref|YP_004087238.1| flagellar hook-basal body complex protein flie [Asticcacaulis
excentricus CB 48]
gi|315416446|gb|ADU13087.1| flagellar hook-basal body complex protein FliE [Asticcacaulis
excentricus CB 48]
Length = 102
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
+FS +L + + + AE+ +A QGK + +AV + AE +L IA+RD+++S
Sbjct: 33 AFSKVLNGAMEQTMKSTQNAESQMIAHSQGKAELIDAVTAVASAEASLESVIAIRDQVIS 92
Query: 99 AVSEVSKMQI 108
A E+ +M I
Sbjct: 93 AYQEILRMPI 102
>gi|118588699|ref|ZP_01546107.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
gi|118438685|gb|EAV45318.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
Length = 106
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ F AL+ + G + A++ ++ ++GK + + V I + E L +A+RD+++
Sbjct: 36 LDFGALVNEAVGGVVDKGRVADDKAVGLVEGKADVVDVVTAIAETEVALETMVAVRDRVI 95
Query: 98 SAVSEVSKMQI 108
SA E+ +M I
Sbjct: 96 SAYEEIMRMPI 106
>gi|302384098|ref|YP_003819921.1| flagellar hook-basal body complex protein FliE [Brevundimonas
subvibrioides ATCC 15264]
gi|302194726|gb|ADL02298.1| flagellar hook-basal body complex protein FliE [Brevundimonas
subvibrioides ATCC 15264]
Length = 99
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 40 FSALLQDMAKGAIGDMEK----AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
FS +LQ G +G+M + AE A+QG+ SM + V + AE +L IA+RD+
Sbjct: 31 FSQMLQ----GVMGNMTQQTRAAETQMTQAVQGQGSMIDMVTAVSSAEASLETVIAVRDQ 86
Query: 96 ILSAVSEVSKMQI 108
++ A E+ +M +
Sbjct: 87 VIQAYQEIMRMPV 99
>gi|170761355|ref|YP_001787984.1| flagellar hook-basal body protein FliE [Clostridium botulinum A3
str. Loch Maree]
gi|169408344|gb|ACA56755.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A3 str. Loch Maree]
Length = 104
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + +SFS +L+D GA KA N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTESVSFSEILKDKLDGANAKQVKANNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDEIDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|168183268|ref|ZP_02617932.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Bf]
gi|237796103|ref|YP_002863655.1| flagellar hook-basal body protein FliE [Clostridium botulinum Ba4
str. 657]
gi|182673620|gb|EDT85581.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Bf]
gi|229261204|gb|ACQ52237.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Ba4 str. 657]
Length = 104
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + +SFS +L+D G KA+N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDEVDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|220925379|ref|YP_002500681.1| flagellar hook-basal body complex protein FliE [Methylobacterium
nodulans ORS 2060]
gi|219949986|gb|ACL60378.1| flagellar hook-basal body complex protein FliE [Methylobacterium
nodulans ORS 2060]
Length = 100
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
R T+ + EGG F LL G ++E +A GK ++ + V + +
Sbjct: 19 RLSPTRPAAPEGG-----FGQLLTAAVDGVAEAGRRSEQQMMAVGAGKANIVDVVTAVAE 73
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
+E L +A+RD+++SA ++ +MQI
Sbjct: 74 SETALQTLVAVRDRVISAYEDIMRMQI 100
>gi|153939516|ref|YP_001391963.1| flagellar hook-basal body protein FliE [Clostridium botulinum F
str. Langeland]
gi|152935412|gb|ABS40910.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum F str. Langeland]
Length = 104
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + +SFS +L+D G KA+N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDEIDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|170748651|ref|YP_001754911.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
radiotolerans JCM 2831]
gi|170655173|gb|ACB24228.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
radiotolerans JCM 2831]
Length = 104
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 52 IGDM-EKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+GD +A++ +++A GK ++ + V + ++E L +A+RD+++SA E+ +MQI
Sbjct: 47 VGDAGRRADSQAVSAAAGKANVVDVVTAVAESETALQTMVAVRDRMISAYEEIMRMQI 104
>gi|307945653|ref|ZP_07660989.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
TrichSKD4]
gi|307771526|gb|EFO30751.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
TrichSKD4]
Length = 110
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 30 NEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
NE +P + F ++Q+ + A+ ++ ++GKT + + V I +AE L +
Sbjct: 31 NEAKVKTPDVDFGQMVQEAVSNIVQQGRDADQKAMGLVEGKTDVVDVVTAIAEAEVALEM 90
Query: 89 SIALRDKILSAVSEVSKMQI 108
+++ D+++SA E+ +M I
Sbjct: 91 MVSVCDRVISAYEEIKRMPI 110
>gi|328543167|ref|YP_004303276.1| flagellar hook-basal body protein FliE [polymorphum gilvum
SL003B-26A1]
gi|326412913|gb|ADZ69976.1| Flagellar hook-basal body protein FliE [Polymorphum gilvum
SL003B-26A1]
Length = 100
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 42/84 (50%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
+ + E +S + F L+++ + + + ++ +QGK + + V I + E
Sbjct: 17 LARQAEAETPTSSVDFGGLVREAVNSVVEKGRETDQKTIGLVQGKADVVDVVTAIAETEV 76
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L +++RD+++SA E+ +M I
Sbjct: 77 ALETMVSVRDRVISAYEEIMRMPI 100
>gi|162147441|ref|YP_001601902.1| flagellar hook-basal body complex protein fliE [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545551|ref|YP_002277780.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786018|emb|CAP55600.1| putative flagellar hook-basal body complex protein fliE
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533228|gb|ACI53165.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
diazotrophicus PAl 5]
Length = 113
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAE 83
TQ+++ SS + FS L KGAI + AE + L GK ++ + + +A+
Sbjct: 29 TQDADPNAQSSDVVTGFSDALNSAIKGAIKTGKTAEAQTAVGLSGKGNLTDIATSVEEAK 88
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
TL A+RD+++ A V +M I
Sbjct: 89 LTLQTVTAVRDRVVQAYQNVMQMTI 113
>gi|39996796|ref|NP_952747.1| MoxR family protein [Geobacter sulfurreducens PCA]
gi|39983684|gb|AAR35074.1| MoxR family protein [Geobacter sulfurreducens PCA]
gi|298505807|gb|ADI84530.1| MoxR family ATPase [Geobacter sulfurreducens KN400]
Length = 313
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH------- 78
TQN E+ G+ P+ S L + M + IG E + A ++G S+R+ + H
Sbjct: 148 TQNPVEQVGTYPLPESQLDRFMVRSGIG--YPPEAIEKAIIKGG-SIRDGIRHLEPLVTV 204
Query: 79 --IMQAERTLNLSIALRDKILSAVSEV 103
I++A+RT+ SI L DK++ + +
Sbjct: 205 NDIIEAQRTVRESIYLSDKVVDYIHAI 231
>gi|146341893|ref|YP_001206941.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. ORS278]
gi|146194699|emb|CAL78724.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
ORS278]
Length = 118
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
++GG S FSALL+D + K+++ ++A GK ++ + V + + + ++ +
Sbjct: 44 DKGGPS---FSALLKDAIGSVVETGRKSDSQAVAMASGKANVMDVVTAVAETDVAVSTLV 100
Query: 91 ALRDKILSAVSEVSKMQI 108
++RD+++ A +V KM I
Sbjct: 101 SVRDRVIQAYEDVMKMTI 118
>gi|187778747|ref|ZP_02995220.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
15579]
gi|187772372|gb|EDU36174.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
15579]
Length = 104
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 9 TNSFISHT---DTIGMRYDFTQNSNEEG-GSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
N F+ + D G + N NE+ + +SFS +L+D G KA+N + +
Sbjct: 3 VNEFVPNIKVFDNFGKNF---VNGNEKTENTEKVSFSEVLKDKLDGVNAKQVKADNSTQS 59
Query: 65 ALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++G+ + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 60 FIKGEEIDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|325288777|ref|YP_004264958.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
glycolicus DSM 8271]
gi|324964178|gb|ADY54957.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
glycolicus DSM 8271]
Length = 107
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTS-----MREAVDHIMQAERTLNLSIALRD 94
FSA LQ+ A+ ++E+ ++ + A++G T+ V + +A +L+L++ +R+
Sbjct: 38 FSAFLQN----AVDNLEQTQSEASVAVEGLTTGAISDFHVPVIALQKAALSLDLTVNVRN 93
Query: 95 KILSAVSEVSKMQI 108
KIL A E+ +MQI
Sbjct: 94 KILDAYHEIMRMQI 107
>gi|170756175|ref|YP_001782280.1| flagellar hook-basal body protein FliE [Clostridium botulinum B1
str. Okra]
gi|169121387|gb|ACA45223.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum B1 str. Okra]
Length = 104
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 28 NSNEEG-GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERT 85
N NE+ + + FS +L+D G KA+N + A ++G + + + + +A+ +
Sbjct: 22 NKNEKAENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEAKMS 81
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ L++ +R+K++ A E+S+MQ+
Sbjct: 82 MELAVQVRNKLVEAYQELSRMQL 104
>gi|226950076|ref|YP_002805167.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A2 str. Kyoto]
gi|226844224|gb|ACO86890.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A2 str. Kyoto]
Length = 104
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 9 TNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N F+ + +F + + + + FS +L+D G KA+N + A ++
Sbjct: 3 VNEFVPNIKVFDNFEKNFINKNEKTENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIK 62
Query: 68 G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + + + + +A+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 63 GDEIDIHNVMLNAEEAKMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|188997544|ref|YP_001931795.1| flagellar hook-basal body complex subunit FliE
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932611|gb|ACD67241.1| flagellar hook-basal body complex subunit FliE
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 94
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
E+ S SFS LLQ+ K D+ A+N+ GK ++++A+ I +A+ + L
Sbjct: 16 EKKEESNTSFSDLLQNFIKDVNNDLINAKNIEQDLSLGKIQNIQDAMYQIEKADISFRLL 75
Query: 90 IALRDKILSAVSEVSKMQI 108
+R+K L + E+ +MQ+
Sbjct: 76 TEIRNKALESYQEIMRMQV 94
>gi|16125207|ref|NP_419771.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
CB15]
gi|221233943|ref|YP_002516379.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
NA1000]
gi|38503159|sp|Q9A9M3|FLIE_CAUCR RecName: Full=Flagellar hook-basal body complex protein FliE
gi|13422231|gb|AAK22939.1| flagellar hook-basal body complex protein FliE [Caulobacter
crescentus CB15]
gi|220963115|gb|ACL94471.1| flagellar hook-basal body complex protein FliE [Caulobacter
crescentus NA1000]
Length = 103
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 33 GGS--SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
GGS + F LL+ GA + AE+ A + GK + + V I AE +L +
Sbjct: 26 GGSQDKGVDFGDLLKSAMDGATKASKVAEHKIAAQVAGKAELVDVVTAISSAEASLETVM 85
Query: 91 ALRDKILSAVSEVSKMQI 108
++RD+++SA E+ +M I
Sbjct: 86 SIRDQVISAYQEIMRMPI 103
>gi|148256778|ref|YP_001241363.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. BTAi1]
gi|146408951|gb|ABQ37457.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
BTAi1]
Length = 118
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLN 87
N ++GG S FSA+L+D + K+++ ++A GK ++ + V + + + ++
Sbjct: 41 NGADKGGPS---FSAVLKDAIGSVMETGRKSDSQAVAMAAGKANVMDVVTAVAETDVAVS 97
Query: 88 LSIALRDKILSAVSEVSKMQI 108
+++RD+++ A +V KM I
Sbjct: 98 TLVSVRDRVIQAYEDVMKMTI 118
>gi|291288217|ref|YP_003505033.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
acetiphilus DSM 12809]
gi|290885377|gb|ADD69077.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
acetiphilus DSM 12809]
Length = 101
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+ D T++S E + + FS++L+D + G +A++ L G+T E+ +Q
Sbjct: 14 KLDTTKSSQAEKPEASVDFSSMLKDALRDVNGAQIEADDAVQKVLSGETKDIESTMIALQ 73
Query: 82 -AERTLNLSIALRDKILSAVSEVSKMQI 108
A+ +L + + +R+KI+ A EV + QI
Sbjct: 74 KADVSLKMMLEVRNKIMEAYQEVMRTQI 101
>gi|268680291|ref|YP_003304722.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
deleyianum DSM 6946]
gi|268618322|gb|ACZ12687.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
deleyianum DSM 6946]
Length = 98
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 22/103 (21%)
Query: 9 TNSFISHTDTIGMRYDFT---QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
+N+ ++ T+++G DF+ QNS +E + + + D+A G + D+ +A ++A
Sbjct: 15 SNATLTKTESVG--EDFSKILQNSIDEINDTQVKGDRAMADLATGEVKDLHQA---AIAI 69
Query: 66 LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +TSM+ L + +R+K LSA E+SK QI
Sbjct: 70 NKAETSMK--------------LMLEIRNKALSAYKEISKTQI 98
>gi|329890581|ref|ZP_08268924.1| flagellar hook-basal body complex protein FliE [Brevundimonas
diminuta ATCC 11568]
gi|328845882|gb|EGF95446.1| flagellar hook-basal body complex protein FliE [Brevundimonas
diminuta ATCC 11568]
Length = 107
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
N GG F+ LLQ++ AE ++QG+ ++ + V I AE +L
Sbjct: 33 PNAAGG-----FADLLQNVMTQTTQQTRAAETQMAQSVQGQGNLIDVVTAISSAEASLET 87
Query: 89 SIALRDKILSAVSEVSKMQI 108
+A+RD+++SA E+ +M I
Sbjct: 88 VMAVRDQVISAYQEIMRMPI 107
>gi|254470039|ref|ZP_05083443.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
gi|211960350|gb|EEA95546.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
Length = 114
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 50 GAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G I D++ SL LQGK ++ + V + + E L +++RD+++SA E+ +M I
Sbjct: 61 GQIADVQ-----SLDLLQGKANVVDVVTAVAETELALETVVSVRDRVISAYEEIMRMPI 114
>gi|163781741|ref|ZP_02176741.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882961|gb|EDP76465.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 97
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALR 93
SP F+ L++ E A+NV A L+G+ + V +A LNL I +R
Sbjct: 23 KSPEDFADALKEFVLWVNSQQENAKNVKEAVLRGEDVPLHRMVIEFEKAGVALNLMIEVR 82
Query: 94 DKILSAVSEVSKMQI 108
+++L E+ +MQ+
Sbjct: 83 NRLLEGYQELLRMQV 97
>gi|254452485|ref|ZP_05065922.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198266891|gb|EDY91161.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 189
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
F EEG +P++F AL D AKG++ D + + VS AA+ G+ +
Sbjct: 126 FIAAFREEG--APVTFEALPDDSAKGSLSDAPRKKPVSDAAMSGRVA 170
>gi|114765222|ref|ZP_01444354.1| flagellar hook-basal body protein FliE [Pelagibaca bermudensis
HTCC2601]
gi|114542357|gb|EAU45385.1| flagellar hook-basal body protein FliE [Roseovarius sp. HTCC2601]
Length = 109
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 9 TNSFISHTDTIGMRYDFTQN---------SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
TNSF+S G Y +Q+ ++EG S F+ ++ A+ + +AE
Sbjct: 5 TNSFLSINAASGA-YRASQDMTAAPVADLGSDEGKPS---FADMVAQAGSDAVQTIREAE 60
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ L+G + V+ ++ + T+ ++A+RDK++ A E+ +M I
Sbjct: 61 VTAQTGLRGNADTQAVVEATLELDSTVKTAVAVRDKLVEAYQEIIRMPI 109
>gi|303326605|ref|ZP_07357047.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
3_1_syn3]
gi|302862593|gb|EFL85525.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
3_1_syn3]
Length = 148
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 20/119 (16%)
Query: 8 GTNSFISHT-------------DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD 54
G + SHT +T G + DF + +++ +P++ S D KG++
Sbjct: 32 GKQTLFSHTLDQSLLRDSVDKGETFGAQADFIRYPDQQ--HTPVTPSNSFGDTIKGSLNK 89
Query: 55 MEKAENVSLAALQGKTSMREAVDH-----IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + ++ A+ S R H + ++ + L+ A+R K+L A E+SKMQ
Sbjct: 90 VNELQSAKAQAIDDFASGRSQNVHELMITMQKSSLAMKLTSAVRGKVLEAYKEISKMQF 148
>gi|75675327|ref|YP_317748.1| flagellar hook-basal body protein FliE [Nitrobacter winogradskyi
Nb-255]
gi|74420197|gb|ABA04396.1| Flagellar hook-basal body complex protein FliE [Nitrobacter
winogradskyi Nb-255]
Length = 103
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 32 EGGSSPISFSALLQDMAKGAI--GDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLS 89
GG P SF A+L+D+ G + G A+ V++A GK ++ + V + + ++
Sbjct: 28 PGGDGP-SFGAVLKDVLGGVVEAGRASDAQTVAMA--SGKANLMDVVTAVADTDVAVSTL 84
Query: 90 IALRDKILSAVSEVSKMQI 108
+++RD+++ + ++ +M I
Sbjct: 85 VSVRDRVIQSYEDIMRMPI 103
>gi|85706170|ref|ZP_01037265.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. 217]
gi|85669334|gb|EAQ24200.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. 217]
Length = 96
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 18 TIGMRYDFTQNSNEEG---GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
T +Y T+ + E G+ +F Q++AK +++ E V+ +A+ GK
Sbjct: 7 TAAQKYTATRTATEPALGQGTGGAAF----QNIAKDFAATLKEGEEVAKSAMIGKADPHS 62
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V + Q E + I +RD+++ A E+ +M +
Sbjct: 63 LVQALAQTELAVEAVITVRDRVVEAYQEILRMPV 96
>gi|86750884|ref|YP_487380.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
HaA2]
gi|86573912|gb|ABD08469.1| flagellar hook-basal body complex protein FliE subunit
[Rhodopseudomonas palustris HaA2]
Length = 101
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 29 SNEEGGSSPI----SFSALLQDMAKGAIGDM-EKAENVSLAALQGKTSMREAVDHIMQAE 83
+N G P SF AL++D A G++ D K++ ++A GK+++ + V + + +
Sbjct: 18 ANPGGAGKPTDNGPSFGALVKD-AMGSVLDAGRKSDAQTVAMANGKSNVMDVVTAVAETD 76
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
++ +++RD+++ + E+ +MQI
Sbjct: 77 VAVSTLVSVRDRVIQSYEEILRMQI 101
>gi|42524764|ref|NP_970144.1| hypothetical protein Bd3405 [Bdellovibrio bacteriovorus HD100]
gi|39576974|emb|CAE78203.1| fliE [Bdellovibrio bacteriovorus HD100]
Length = 111
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAAL-QGKTSMREAVDHIMQAERT---LNLSIALRD 94
SF+ L+D A G++ +M+KA + ++ L GKT D ++ AE+ L + + +R+
Sbjct: 41 SFADTLKD-AVGSVNEMQKASDKAMQNLATGKTD--NVADVMIAAEKADIALKVMVQVRN 97
Query: 95 KILSAVSEVSKMQI 108
KI+ A EV KMQ+
Sbjct: 98 KIIDAYQEVMKMQV 111
>gi|163869290|ref|YP_001610546.1| ATP-binding component of ABC-transporter system [Bartonella
tribocorum CIP 105476]
gi|161018993|emb|CAK02551.1| ATP-binding component of ABC-transporter system [Bartonella
tribocorum CIP 105476]
Length = 264
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 41 SALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDH 78
+ + QD KG+ G + EN++LAAL+G + S+R A++H
Sbjct: 83 ACVFQDSLKGSCGSLTIEENLALAALRGNRRSLRSALNH 121
>gi|119384844|ref|YP_915900.1| flagellar hook-basal body complex protein FliE [Paracoccus
denitrificans PD1222]
gi|119374611|gb|ABL70204.1| flagellar hook-basal body complex protein FliE [Paracoccus
denitrificans PD1222]
Length = 92
Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 55 MEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
ME+ + + A+ G+T + V I +AE L +A+RDK++ A E+ +M +
Sbjct: 39 MEQVDLDAAGAMTGQTDTHDLVHSIARAEIALETVVAIRDKVVEAYQEILRMPV 92
>gi|260836899|ref|XP_002613443.1| hypothetical protein BRAFLDRAFT_84579 [Branchiostoma floridae]
gi|229298828|gb|EEN69452.1| hypothetical protein BRAFLDRAFT_84579 [Branchiostoma floridae]
Length = 138
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQ----NSNEEGGSSPISFSALLQDMAKGAIGDME 56
+M E++QGT +I DT+ + DF S+ + G SPIS+ +Q A G
Sbjct: 25 VMQERLQGTPIYIVLPDTLFSQPDFDNLVGGCSSRQKGFSPISYLVEVQHTANNQQGSPH 84
Query: 57 KAENVSLAALQGKTSMREAV 76
K +V QG+ S +++
Sbjct: 85 KESSVESRTTQGQQSPPQSL 104
>gi|209884537|ref|YP_002288394.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
carboxidovorans OM5]
gi|209872733|gb|ACI92529.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
carboxidovorans OM5]
Length = 108
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 41/70 (58%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF+ALL++ G + K++ ++A GK ++ + V + + + ++ +++RDK++
Sbjct: 39 SFNALLKEAMNGVLETGHKSDAQAVAMASGKANVMDVVTAVAETDVAVSTLVSVRDKVIQ 98
Query: 99 AVSEVSKMQI 108
A ++ +M I
Sbjct: 99 AYEDIMRMPI 108
>gi|27380923|ref|NP_772452.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
USDA 110]
gi|38502985|sp|Q89I27|FLIE1_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 1
gi|27354089|dbj|BAC51077.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
USDA 110]
Length = 102
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 27 QNSNEEGGS--SPISFSALLQDMAKGAI---GDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+NS GS S SF++LL+D A G++ G A+ V++AA GK ++ + V +
Sbjct: 19 ENSGAGKGSEASGQSFASLLKD-AVGSVMESGRKSDAQTVAMAA--GKANVMDVVTAVAD 75
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ +++RD+++SA ++ KM I
Sbjct: 76 TDVAVSTLVSVRDRVISAYEDIMKMPI 102
>gi|157738154|ref|YP_001490838.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
gi|315636297|ref|ZP_07891547.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
gi|157700008|gb|ABV68168.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
gi|315479386|gb|EFU70069.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
Length = 106
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ----GKT-SMREAVDHIMQA 82
++NE G S Q++ GA+ D+ + +++ GK +++EAV I +A
Sbjct: 28 DNNELAGKS-------FQELLDGAVNDVNSTQIKGYDSMKEIATGKVVNLQEAVQKIEEA 80
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
E T+ L++ +++K ++A EV +MQ+
Sbjct: 81 ELTMKLALEVKNKAINAYREVMRMQV 106
>gi|254502943|ref|ZP_05115094.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
gi|222439014|gb|EEE45693.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
Length = 104
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ F ++Q + + A+ ++ ++GKT + + V + +AE TL +A+RD+++
Sbjct: 34 VDFGQMVQSAVENVVDQGRVADAKAVGLIEGKTDVVDVVTAVAEAEVTLETMVAVRDRVI 93
Query: 98 SAVSEVSKMQI 108
SA E+ +M I
Sbjct: 94 SAYEEIMRMPI 104
>gi|126730137|ref|ZP_01745949.1| putative flagellar hook-basal body complex protein [Sagittula
stellata E-37]
gi|126709517|gb|EBA08571.1| putative flagellar hook-basal body complex protein [Sagittula
stellata E-37]
Length = 97
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 40/89 (44%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
+Y ++ + E + P A + + + + AE S A+ G V+ +
Sbjct: 9 AQKYAASRPAMEPDSADPTKMEADFARVTEDFVQQLRAAEETSQEAMTGDADPHALVEAL 68
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q+E + +A+RDK++ A E+ +M +
Sbjct: 69 AQSELAVETVVAVRDKVVEAYQEILRMPV 97
>gi|71997492|ref|NP_001021872.1| UNCoordinated family member (unc-13) [Caenorhabditis elegans]
gi|32697975|emb|CAD56619.2| C. elegans protein ZK524.2c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|32698012|emb|CAD56561.2| C. elegans protein ZK524.2c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1475
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1167 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDMARESEKSL 1216
>gi|71997501|ref|NP_001021873.1| UNCoordinated family member (unc-13) [Caenorhabditis elegans]
gi|51338690|sp|P27715|UNC13_CAEEL RecName: Full=Phorbol ester/diacylglycerol-binding protein unc-13;
AltName: Full=Uncoordinated protein 13
gi|32697974|emb|CAD90190.2| C. elegans protein ZK524.2d, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|32698011|emb|CAD90173.2| C. elegans protein ZK524.2d, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|32698027|emb|CAD90170.2| C. elegans protein ZK524.2d, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 2155
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1847 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDMARESEKSL 1896
>gi|71997504|ref|NP_001021874.1| UNCoordinated family member (unc-13) [Caenorhabditis elegans]
gi|32697976|emb|CAE11317.1| C. elegans protein ZK524.2e, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|32698013|emb|CAE11294.1| C. elegans protein ZK524.2e, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|32698028|emb|CAE11299.1| C. elegans protein ZK524.2e, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1816
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1508 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDMARESEKSL 1557
>gi|71997482|ref|NP_001021871.1| UNCoordinated family member (unc-13) [Caenorhabditis elegans]
gi|3874343|emb|CAB01966.1| C. elegans protein ZK524.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|3874959|emb|CAB07173.1| C. elegans protein ZK524.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|3881736|emb|CAA98147.1| C. elegans protein ZK524.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 1813
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1505 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDMARESEKSL 1554
>gi|242319811|emb|CAZ65548.1| C. elegans protein ZK524.2f, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|242333227|emb|CAZ65468.1| C. elegans protein ZK524.2f, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|242334888|emb|CAZ65479.1| C. elegans protein ZK524.2f, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1819
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1511 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDMARESEKSL 1560
>gi|163737621|ref|ZP_02145038.1| Inositol monophosphatase family protein [Phaeobacter gallaeciensis
BS107]
gi|161389147|gb|EDQ13499.1| Inositol monophosphatase family protein [Phaeobacter gallaeciensis
BS107]
Length = 266
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
+I+ I GT SFIS GM F + + G+ IS A L ++ G +G
Sbjct: 90 WVIDPIDGTRSFISGHPLFGMLIAFLSHGQLQAGT--ISMPA-LNEVYCGGLGVPATCNG 146
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
+ + + G+ + AV +I + E+ L A+ ++L A
Sbjct: 147 IPI-QVSGQRELNSAVLYINEGEKLLENHPAIATRLLQA 184
>gi|170743257|ref|YP_001771912.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
gi|168197531|gb|ACA19478.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
Length = 101
Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
F L+ G ++ E+ +A GK ++ + V + ++E L +A+RD+++S
Sbjct: 32 GFGQLVASAIDGVEAAGKRGEHQMMAVGAGKANVVDVVTAVAESETALQTLVAVRDRVIS 91
Query: 99 AVSEVSKMQI 108
A ++ +MQI
Sbjct: 92 AYEDIMRMQI 101
>gi|253573517|ref|ZP_04850860.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251847045|gb|EES75050.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 102
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS----FSALLQDMAKGAIGDMEK 57
MIE++ SF S GM Q S E +P FS+ L D +G
Sbjct: 1 MIERM----SFDSLKPLTGM-----QTSGNEQNLTPAQAIKQFSSYLNDALEGVAAQEAN 51
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A+ V+ L GK S E + QA +L L+ +R+K++ A E+ + QI
Sbjct: 52 AQQVNNQFLLGKVSADEMMIASEQALLSLQLTTQVRNKVIEAYQEIMRTQI 102
>gi|163740805|ref|ZP_02148198.1| Inositol monophosphatase family protein [Phaeobacter gallaeciensis
2.10]
gi|161385796|gb|EDQ10172.1| Inositol monophosphatase family protein [Phaeobacter gallaeciensis
2.10]
Length = 264
Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
+I+ I GT SFIS GM F + + G+ IS A L ++ G +G
Sbjct: 88 WVIDPIDGTRSFISGHPLFGMLIAFLSHGQLQAGT--ISMPA-LNEVYCGGLGVPATCNG 144
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
+ + + G+ + AV +I + E+ L A+ ++L A
Sbjct: 145 IPI-QVSGQRELNSAVLYINEGEKLLENHPAIATRLLQA 182
>gi|309360526|emb|CAP30996.2| CBR-UNC-13 protein [Caenorhabditis briggsae AF16]
Length = 2250
Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
P+S ALL+ + IGD+ K + ++ +++G S+++ +D ++E++L
Sbjct: 1926 PLSDKALLKQLPNAKIGDVTKLMSTNIQSIKGMNSVKDMMDIARESEKSL 1975
Searching..................................................done
Results from round 2
>gi|254780379|ref|YP_003064792.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040056|gb|ACT56852.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
asiaticus str. psy62]
Length = 108
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN
Sbjct: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI
Sbjct: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
>gi|315121848|ref|YP_004062337.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495250|gb|ADR51849.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 107
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/107 (62%), Positives = 83/107 (77%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MIEQIQ T FI HT T+ M+ D Q++ E +S + FS+LLQDM + AIG ++KAE+
Sbjct: 1 MIEQIQRTEGFIPHTSTVEMQADSVQSAKEVSDASSVDFSSLLQDMVQEAIGKIKKAEDF 60
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
SL ALQGKTSMREA+D IMQAERTL +SIALRDKI+S+ E+SKMQI
Sbjct: 61 SLTALQGKTSMREAIDCIMQAERTLQVSIALRDKIVSSALEISKMQI 107
>gi|325291940|ref|YP_004277804.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
gi|325059793|gb|ADY63484.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
Length = 111
Score = 94.0 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYD--FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
MI+ I+ S T + D F + SF+++L +M+ A+ +++K
Sbjct: 1 MIDGIKQLGSLSLTRGTSNVSSLTDSIFGSQQTTPAQQTGASFASVLGNMSTDAMNNLKK 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE S +QGK + RE VD ++ AE++L +IA RDKI+SA +++KMQI
Sbjct: 61 AEVASFEGIQGKANTREVVDAVLSAEQSLQTAIAFRDKIVSAYLDITKMQI 111
>gi|15964414|ref|NP_384767.1| flagellar hook-basal body protein FliE [Sinorhizobium meliloti
1021]
gi|307311556|ref|ZP_07591197.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti BL225C]
gi|307318911|ref|ZP_07598342.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti AK83]
gi|17380479|sp|Q52945|FLIE_RHIME RecName: Full=Flagellar hook-basal body complex protein FliE
gi|15073591|emb|CAC45233.1| Flagellar hook-basal body complex protein [Sinorhizobium meliloti
1021]
gi|306895325|gb|EFN26080.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti AK83]
gi|306899573|gb|EFN30202.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
meliloti BL225C]
Length = 111
Score = 93.6 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F I T+ G + G ++P SF+ +L +M AI M+
Sbjct: 1 MIDAIQSVGAFSTIRETEGAGPAPSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE SL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|15887899|ref|NP_353580.1| flagellar hook-basal body protein FliE [Agrobacterium tumefaciens
str. C58]
gi|3913678|sp|Q44337|FLIE_AGRT5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|1086560|gb|AAB68967.1| FliE [Agrobacterium tumefaciens]
gi|2459713|gb|AAB71789.1| FliE [Agrobacterium tumefaciens]
gi|15155491|gb|AAK86365.1| flagellar hook-basal body complex protein [Agrobacterium
tumefaciens str. C58]
Length = 112
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDF-----TQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
MI+ I+ S G+ + + + SF+++L +++ A+ +++
Sbjct: 1 MIDGIKQLGSLSLTRGASGVSSLTESLFGGEQQSTPAQQTGASFASVLGNVSMDAMNNLK 60
Query: 57 KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
KAE S +QGK + RE VD ++ AE++L +IALRDKI+SA +++KMQI
Sbjct: 61 KAEVASFEGIQGKANTREVVDAVLSAEQSLQTAIALRDKIVSAYLDITKMQI 112
>gi|2275160|gb|AAB81412.1| FliE [Sinorhizobium meliloti]
Length = 111
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F I T+ G + G ++P SF+ +L +M AI M+
Sbjct: 1 MIDAIQSVGAFSTIRETEGAGPASSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE SL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|170741835|ref|YP_001770490.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
gi|168196109|gb|ACA18056.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
Length = 112
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 2 MIEQIQGTNSFISHTDTI------GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
MIE + N+ I T + G+ + + P +F ++ +A G +
Sbjct: 1 MIEAVASLNALIDRTGPVSGPSSAGLLQGVLSPAPTAIPTGP-AFGDVMAQIASGMRDTL 59
Query: 56 EKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E ++A LQGK S ++ V+ ++ AE++L +IA+RDK+++A E+S+M I
Sbjct: 60 RAGEATAIAGLQGKASAQQVVEAVLSAEQSLQTTIAIRDKVVAAYLEISRMAI 112
>gi|150395484|ref|YP_001325951.1| flagellar hook-basal body protein FliE [Sinorhizobium medicae
WSM419]
gi|166214856|sp|A6U636|FLIE_SINMW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|150026999|gb|ABR59116.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
medicae WSM419]
Length = 111
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPI--SFSALLQDMAKGAIGDMEK 57
MI+ IQ +F + T+ G + + G ++P SF+ +L +M AI ++
Sbjct: 1 MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE VSL A++G+ + RE VD +M AE++L +IA+RDK+++A E+++MQI
Sbjct: 61 AEGVSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111
>gi|227820857|ref|YP_002824827.1| flagellar hook-basal body protein FliE [Sinorhizobium fredii
NGR234]
gi|254789311|sp|C3MG23|FLIE_RHISN RecName: Full=Flagellar hook-basal body complex protein FliE
gi|227339856|gb|ACP24074.1| predicted flagellar hook-basal body complex protein FliE
[Sinorhizobium fredii NGR234]
Length = 111
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 2 MIEQIQGTNSF--ISHTDTIGMRYDFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEK 57
MI+ IQ +F + + + + G S+P S F+ +L M AI M+
Sbjct: 1 MIDAIQSVGAFSNLKEAEGTSLTASTALSLPSAGASAPQSQSFAEVLGTMTTDAIRSMKS 60
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE VSL A++G+ + RE VD +M AE++L ++A+RDK+++A E+++MQI
Sbjct: 61 AEGVSLQAIRGEANTREVVDAVMNAEQSLQTALAIRDKVVTAYLEIARMQI 111
>gi|153011525|ref|YP_001372739.1| flagellar hook-basal body protein FliE [Ochrobactrum anthropi ATCC
49188]
gi|166214852|sp|A6X6Q6|FLIE_OCHA4 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|151563413|gb|ABS16910.1| flagellar hook-basal body complex protein FliE [Ochrobactrum
anthropi ATCC 49188]
Length = 111
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I I N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSISARNALSRLSETVAEKGVGSTSAPQAVPAAPGASFGEVLSQMTDSVGQKLQTAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|239834443|ref|ZP_04682771.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
LMG 3301]
gi|239822506|gb|EEQ94075.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
LMG 3301]
Length = 111
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I I N+ ++T+ + + ++ + ++P SF +L M +E AE
Sbjct: 5 IMSISARNALSRLSETVVEKGVGSASAPQAVPATPGASFGEVLSQMTDSVGQKLEAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|306841050|ref|ZP_07473774.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
gi|306288939|gb|EFM60239.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
Length = 111
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I I N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSISARNALSRLSETVAEKGVGSASAPQAVPATPGASFGEVLSQMTDSVGQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|222147570|ref|YP_002548527.1| flagellar hook-basal body protein FliE [Agrobacterium vitis S4]
gi|221734558|gb|ACM35521.1| flagellar hook-basal body complex protein [Agrobacterium vitis S4]
Length = 124
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
T S + + G ++ +SFS ++ + A+ +++ AE+ SL +
Sbjct: 24 STASLGGTHSLFSTQTGVAAQNATPGTATGMSFSDVVGGVMNDAMQNLKTAESNSLDGML 83
Query: 68 GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GK S RE VD +M A+++L +IALRDK++SA +++KMQI
Sbjct: 84 GKVSTREVVDSVMSAQKSLQTAIALRDKLVSAFLDITKMQI 124
>gi|323139653|ref|ZP_08074695.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
ATCC 49242]
gi|322395085|gb|EFX97644.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
ATCC 49242]
Length = 108
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERT 85
Q++ ++ SF +LQ A A+ ++ E +++ ++GK ++ + VD IM AER
Sbjct: 26 AQSARPAADAAGSSFGEVLQKFAADAVDSLKSGEAAAISGVEGKLAVHKVVDAIMSAERD 85
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
LN IALRDK ++A E+S+M I
Sbjct: 86 LNTVIALRDKAVNAYQEISRMAI 108
>gi|254720611|ref|ZP_05182422.1| flagellar hook-basal body protein FliE [Brucella sp. 83/13]
gi|265985651|ref|ZP_06098386.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
gi|306838573|ref|ZP_07471410.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
gi|264664243|gb|EEZ34504.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
gi|306406359|gb|EFM62601.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
Length = 111
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSVSARNALSRLSETVAEKGVGSASAPQAVPTTPGASFGEVLSQMTDSVGQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|13472575|ref|NP_104142.1| flagellar hook-basal body protein FliE [Mesorhizobium loti
MAFF303099]
gi|38503149|sp|Q98HD8|FLIE_RHILO RecName: Full=Flagellar hook-basal body complex protein FliE
gi|14023321|dbj|BAB49928.1| flagellar hook-basal body protein; FleE [Mesorhizobium loti
MAFF303099]
Length = 107
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
+ G+ SF+ + A + ++ AE VSL AL+G R+ VD +M A++ L
Sbjct: 28 APATSGNLGTSFAEAVSQAASKTVNTLQNAEQVSLQALKGDADTRQVVDAVMSAQQALQT 87
Query: 89 SIALRDKILSAVSEVSKMQI 108
++A+RDK++SA EVS+M I
Sbjct: 88 AVAIRDKVVSAYLEVSRMGI 107
>gi|90422609|ref|YP_530979.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisB18]
gi|90104623|gb|ABD86660.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisB18]
Length = 106
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSN--EEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
++ +S +S + D ++++ + G+ I F +++ +A AIG ++ E S+
Sbjct: 2 LETISSIVSSPGGLSKTTDVARSASALPQAGAPTIGFDGVMEQVAADAIGTLKAGEAASI 61
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +QGK S + V+ +M AERTL +++A+RDK++ A EVS+M I
Sbjct: 62 SGMQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106
>gi|296447439|ref|ZP_06889364.1| flagellar hook-basal body complex protein FliE [Methylosinus
trichosporium OB3b]
gi|296255059|gb|EFH02161.1| flagellar hook-basal body complex protein FliE [Methylosinus
trichosporium OB3b]
Length = 107
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI G S ++ + T S SFS +L + A+ ++ +E
Sbjct: 1 MIPLATGIVSSVAADLGVSALQGITGKSTLTPKVDGPSFSEVLGQLTTDAVDTLKSSEAT 60
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+AA+QGK S+++ VD +M AERTL +IA+RDK + A E+S+M I
Sbjct: 61 SIAAVQGKASVQQVVDQVMTAERTLQTAIAVRDKAVGAYQEISRMTI 107
>gi|306846279|ref|ZP_07478840.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
gi|306273274|gb|EFM55143.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
Length = 111
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + +P SF +L M ++ AE
Sbjct: 5 IMSVSARNTLSRLSETVAEKGVGSASAPQAVPVAPGASFGEVLSQMTDSVGQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|256111944|ref|ZP_05452895.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 3
str. Ether]
gi|265993391|ref|ZP_06105948.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 3 str. Ether]
gi|262764261|gb|EEZ10293.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 3 str. Ether]
Length = 111
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSVSARNALSRLSETVAEKGVGSASAPQAVPATPGASFCEVLSQMTGSVSQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|256059609|ref|ZP_05449807.1| flagellar hook-basal body protein FliE [Brucella neotomae 5K33]
gi|261323578|ref|ZP_05962775.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
5K33]
gi|261299558|gb|EEY03055.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
5K33]
Length = 111
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 ITSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|260466620|ref|ZP_05812808.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
opportunistum WSM2075]
gi|259029626|gb|EEW30914.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
opportunistum WSM2075]
Length = 107
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
+ G+ SF+ L A + M+ AE VS+ AL+G R+ VD +M A++ L
Sbjct: 28 APAAPGNLGTSFAEALSQAASKTVSTMQNAEQVSMQALKGDADTRQVVDAVMSAQQALQT 87
Query: 89 SIALRDKILSAVSEVSKMQI 108
++A+RDK++SA EVS+M I
Sbjct: 88 AVAIRDKVVSAYLEVSRMGI 107
>gi|148558234|ref|YP_001257212.1| flagellar hook-basal body protein FliE [Brucella ovis ATCC 25840]
gi|166214843|sp|A5VTQ7|FLIE_BRUO2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|148369519|gb|ABQ62391.1| flagellar hook-basal body complex protein FliE [Brucella ovis ATCC
25840]
Length = 111
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTVIAIRDKIVQAYLEISRMPI 111
>gi|17989432|ref|NP_542065.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
str. 16M]
gi|23499915|ref|NP_699355.1| flagellar hook-basal body protein FliE [Brucella suis 1330]
gi|62317102|ref|YP_222955.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 1 str.
9-941]
gi|83269094|ref|YP_418385.1| flagellar hook-basal body protein FliE [Brucella melitensis biovar
Abortus 2308]
gi|161620235|ref|YP_001594121.1| flagellar hook-basal body protein FliE [Brucella canis ATCC 23365]
gi|163844345|ref|YP_001622000.1| flagellar hook-basal body protein FliE [Brucella suis ATCC 23445]
gi|189022367|ref|YP_001932108.1| flagellar hook-basal body protein FliE [Brucella abortus S19]
gi|225628624|ref|ZP_03786658.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
gi|225686011|ref|YP_002733983.1| flagellar hook-basal body protein FliE [Brucella melitensis ATCC
23457]
gi|237816664|ref|ZP_04595656.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
A]
gi|254691413|ref|ZP_05154667.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 6 str.
870]
gi|254695289|ref|ZP_05157117.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 3 str.
Tulya]
gi|254698387|ref|ZP_05160215.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 2 str.
86/8/59]
gi|254699460|ref|ZP_05161288.1| flagellar hook-basal body protein FliE [Brucella suis bv. 5 str.
513]
gi|254702575|ref|ZP_05164403.1| flagellar hook-basal body protein FliE [Brucella suis bv. 3 str.
686]
gi|254706293|ref|ZP_05168121.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
M163/99/10]
gi|254711413|ref|ZP_05173224.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
B2/94]
gi|254712012|ref|ZP_05173823.1| flagellar hook-basal body protein FliE [Brucella ceti M644/93/1]
gi|254715081|ref|ZP_05176892.1| flagellar hook-basal body protein FliE [Brucella ceti M13/05/1]
gi|254731832|ref|ZP_05190410.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 4 str.
292]
gi|256014941|ref|YP_003104950.1| flagellar basal body protein [Brucella microti CCM 4915]
gi|256029957|ref|ZP_05443571.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
M292/94/1]
gi|256043072|ref|ZP_05446016.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
str. Rev.1]
gi|256158119|ref|ZP_05456037.1| flagellar hook-basal body protein FliE [Brucella ceti M490/95/1]
gi|256252927|ref|ZP_05458463.1| flagellar hook-basal body protein FliE [Brucella ceti B1/94]
gi|256256599|ref|ZP_05462135.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 9 str.
C68]
gi|256262866|ref|ZP_05465398.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 2 str. 63/9]
gi|260544340|ref|ZP_05820161.1| flagellar hook-basal body complex protein fliE [Brucella abortus
NCTC 8038]
gi|260564302|ref|ZP_05834787.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. 16M]
gi|260568517|ref|ZP_05838986.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
str. 40]
gi|260757027|ref|ZP_05869375.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 6 str. 870]
gi|260759601|ref|ZP_05871949.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 4 str. 292]
gi|260762845|ref|ZP_05875177.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 2 str. 86/8/59]
gi|260882837|ref|ZP_05894451.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 9 str. C68]
gi|261215658|ref|ZP_05929939.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 3 str. Tulya]
gi|261216791|ref|ZP_05931072.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M13/05/1]
gi|261220018|ref|ZP_05934299.1| flagellar hook-basal body complex protein fliE [Brucella ceti
B1/94]
gi|261313737|ref|ZP_05952934.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M163/99/10]
gi|261319021|ref|ZP_05958218.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis B2/94]
gi|261319658|ref|ZP_05958855.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M644/93/1]
gi|261749911|ref|ZP_05993620.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
str. 513]
gi|261753155|ref|ZP_05996864.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
str. 686]
gi|265986976|ref|ZP_06099533.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M292/94/1]
gi|265989510|ref|ZP_06102067.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. Rev.1]
gi|265996636|ref|ZP_06109193.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M490/95/1]
gi|294853174|ref|ZP_06793846.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
07-0026]
gi|297249955|ref|ZP_06933656.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 5 str. B3196]
gi|54037112|sp|P67707|FLIE_BRUSU RecName: Full=Flagellar hook-basal body complex protein FliE
gi|54041063|sp|P67706|FLIE_BRUME RecName: Full=Flagellar hook-basal body complex protein FliE
gi|75495902|sp|Q579U0|FLIE_BRUAB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|123545537|sp|Q2YJ71|FLIE_BRUA2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189044491|sp|A9MDR2|FLIE_BRUC2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189044492|sp|A9WXL2|FLIE_BRUSI RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704222|sp|B2SCV8|FLIE_BRUA1 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|254789305|sp|C0RK96|FLIE_BRUMB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|17985309|gb|AAL54329.1| flagellar hook-basal body complex protein flie [Brucella melitensis
bv. 1 str. 16M]
gi|23463492|gb|AAN33360.1| flagellar hook-basal body complex protein FliE [Brucella suis 1330]
gi|62197295|gb|AAX75594.1| FliE, flagellar hook-basal body complex protein [Brucella abortus
bv. 1 str. 9-941]
gi|82939368|emb|CAJ12316.1| Flagellar hook-basal body complex protein FliE [Brucella melitensis
biovar Abortus 2308]
gi|161337046|gb|ABX63350.1| Hypothetical protein BCAN_B0154 [Brucella canis ATCC 23365]
gi|163675068|gb|ABY39178.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020941|gb|ACD73662.1| Flagellar hook-basal body complex protein FliE [Brucella abortus
S19]
gi|225616470|gb|EEH13518.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
gi|225642116|gb|ACO02029.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|237787477|gb|EEP61693.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
A]
gi|255997601|gb|ACU49288.1| flagellar basal body protein [Brucella microti CCM 4915]
gi|260097611|gb|EEW81485.1| flagellar hook-basal body complex protein fliE [Brucella abortus
NCTC 8038]
gi|260151945|gb|EEW87038.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. 16M]
gi|260155182|gb|EEW90263.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
str. 40]
gi|260669919|gb|EEX56859.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 4 str. 292]
gi|260673266|gb|EEX60087.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 2 str. 86/8/59]
gi|260677135|gb|EEX63956.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 6 str. 870]
gi|260872365|gb|EEX79434.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 9 str. C68]
gi|260917265|gb|EEX84126.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 3 str. Tulya]
gi|260918602|gb|EEX85255.1| flagellar hook-basal body complex protein fliE [Brucella ceti
B1/94]
gi|260921880|gb|EEX88448.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M13/05/1]
gi|261292348|gb|EEX95844.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M644/93/1]
gi|261298244|gb|EEY01741.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis B2/94]
gi|261302763|gb|EEY06260.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M163/99/10]
gi|261739664|gb|EEY27590.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
str. 513]
gi|261742908|gb|EEY30834.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
str. 686]
gi|262550933|gb|EEZ07094.1| flagellar hook-basal body complex protein fliE [Brucella ceti
M490/95/1]
gi|263000179|gb|EEZ12869.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 1 str. Rev.1]
gi|263092701|gb|EEZ16910.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
bv. 2 str. 63/9]
gi|264659173|gb|EEZ29434.1| flagellar hook-basal body complex protein fliE [Brucella
pinnipedialis M292/94/1]
gi|294818829|gb|EFG35829.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
07-0026]
gi|297173824|gb|EFH33188.1| flagellar hook-basal body complex protein fliE [Brucella abortus
bv. 5 str. B3196]
gi|326410334|gb|ADZ67398.1| flagellar hook-basal body protein FliE [Brucella melitensis M28]
gi|326553626|gb|ADZ88265.1| flagellar hook-basal body protein FliE [Brucella melitensis M5-90]
Length = 111
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENV 61
I + N+ ++T+ + + ++ + ++P SF +L M ++ AE
Sbjct: 5 IMSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ ++G +R+ V +M+AE++L +IA+RDKI+ A E+S+M I
Sbjct: 65 SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111
>gi|288958049|ref|YP_003448390.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
gi|288910357|dbj|BAI71846.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
Length = 99
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLS 89
SF +L+ AK +IG ++K+E++S A GK + + V + AE TL
Sbjct: 21 PGMAARDGASFGDVLEQAAKESIGTLKKSEDMSALATVGKADLNDVVQAVTNAEVTLQTV 80
Query: 90 IALRDKILSAVSEVSKMQI 108
A+RDK+L+A E+ +M +
Sbjct: 81 TAVRDKVLNAYQEILRMPM 99
>gi|118589982|ref|ZP_01547386.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
gi|118437479|gb|EAV44116.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
Length = 110
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI---SFSALLQDMAKGAIGDMEKA 58
MI +I S +T ++ + GG+ + SFS + ++ AI +++
Sbjct: 1 MINEISALTSSTDGVLKAASTTRYTASTPDLGGTGSVGEISFSDAMAKVSTDAIDKIKQG 60
Query: 59 ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E S+A + G+ S+++ V+ +M AE TL +IA+RDK++SA E+S+M I
Sbjct: 61 EAASIAGVDGQASVQQVVEAVMAAESTLQTAIAIRDKVVSAYQEISRMSI 110
>gi|222084864|ref|YP_002543393.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
gi|254789304|sp|B9J966|FLIE_AGRRK RecName: Full=Flagellar hook-basal body complex protein FliE
gi|221722312|gb|ACM25468.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
Length = 116
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 63/106 (59%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ +G S + + + G S+ SF++++ D+AK + +++AEN S
Sbjct: 11 LSATRGLGSIATDLSSAASNAIASTPETAIGSSAVGSFASVMSDVAKNTVSTLKEAENAS 70
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A ++G S RE VD +MQA++TL +IALRDK++SA +++KMQI
Sbjct: 71 FAGIKGTMSTREVVDKVMQADQTLQTAIALRDKMVSAFLDITKMQI 116
>gi|254559208|ref|YP_003066303.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
gi|254266486|emb|CAX22250.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
Length = 117
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNS----------NEEGGSSPISFSALLQDMAKGA 51
MIE + +F T TQ + ++P F ++ +A A
Sbjct: 1 MIEALNSLAAFDKVAGTSFAGAAPTQKAMFSPAALSGIAGTAPTAPTDFGEVMAQVASSA 60
Query: 52 IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E +++ +QGK + ++ V+ +M AE++L +A+RDK+++A E+S+M I
Sbjct: 61 RDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVLAIRDKVVAAYLELSRMPI 117
>gi|163794132|ref|ZP_02188105.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
gi|159180746|gb|EDP65265.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
Length = 98
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
+ N + F+ ++D A AI + + E+VS + GK + + V
Sbjct: 7 GPLPPVAGGGANMASGPTAGNKDFANYVRDAASEAIDSLHRGEDVSKEGIAGKADLTDVV 66
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ AE TL LRDK++SA E+ ++ I
Sbjct: 67 AAVNDAELTLQTVTTLRDKLVSAYQEILRIPI 98
>gi|163850062|ref|YP_001638105.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens PA1]
gi|218528665|ref|YP_002419481.1| flagellar hook-basal body complex protein FliE [Methylobacterium
chloromethanicum CM4]
gi|240137196|ref|YP_002961665.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|163661667|gb|ABY29034.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens PA1]
gi|218520968|gb|ACK81553.1| flagellar hook-basal body complex protein FliE [Methylobacterium
chloromethanicum CM4]
gi|240007162|gb|ACS38388.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
Length = 117
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNS----------NEEGGSSPISFSALLQDMAKGA 51
MIE + +F T TQ + ++P F ++ +A A
Sbjct: 1 MIEALNSLAAFDKVAGTSFAGAAPTQKAMFSPAALSGIAGTAPTAPTDFGEVMAQVASSA 60
Query: 52 IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E +++ +QGK + ++ V+ +M AE++L +A+RDK+++A E+S+M I
Sbjct: 61 RDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 117
>gi|319781682|ref|YP_004141158.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167570|gb|ADV11108.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 108
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLN 87
+ GG+ SF+ L A + M+ AE VS+ AL+G R+ VD +M A++ L
Sbjct: 28 ATPSAGGNVGTSFAEALSQAASKTVDTMQNAEQVSMQALKGDADTRQVVDAVMSAQQALQ 87
Query: 88 LSIALRDKILSAVSEVSKMQI 108
++A+RDK++SA EVS+M I
Sbjct: 88 TAVAIRDKVVSAYLEVSRMGI 108
>gi|110632657|ref|YP_672865.1| flagellar hook-basal body protein FliE [Mesorhizobium sp. BNC1]
gi|110283641|gb|ABG61700.1| flagellar hook-basal body complex protein FliE [Chelativorans sp.
BNC1]
Length = 102
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
I G + + T Q + + +FSA++ ++A + + KAEN+SL A
Sbjct: 2 ISGIGNITNLPST--GTESVLQQAETAAPTDGDAFSAMVSELATNTVSRLTKAENLSLQA 59
Query: 66 LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
LQG R VD +M AE++L +IA+RDKI+SA E+S+M I
Sbjct: 60 LQGDGDTRAVVDAVMDAEQSLQAAIAIRDKIVSAYLEISRMAI 102
>gi|182680549|ref|YP_001834695.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636432|gb|ACB97206.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 114
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 56/103 (54%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
+ G S + + + S FSA+L + A+ +++ AE S++
Sbjct: 12 LDGLASVATDAVGKTITSIKRGPAASNITDSGTDFSAILSQVTNQAVDNLKTAEAASISG 71
Query: 66 LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
LQGK S+++ V+ +M A+++L +IA+RDK++SA +S+M I
Sbjct: 72 LQGKASVQQVVESMMTAQQSLQTAIAVRDKVVSAYQSISQMPI 114
>gi|188579866|ref|YP_001923311.1| flagellar hook-basal body complex protein FliE [Methylobacterium
populi BJ001]
gi|179343364|gb|ACB78776.1| flagellar hook-basal body complex protein FliE [Methylobacterium
populi BJ001]
Length = 117
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 2 MIEQIQGTNSFISHTDT----------IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA 51
MIE + ++F T + S+P F ++ +A A
Sbjct: 1 MIEALSSLSAFDKIAGTSFAETAPAQKAAFSPAAVSGISGTAPSAPTDFGDVMAQVAASA 60
Query: 52 IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E +++ +QGK + ++ V+ +M AE++L +A+RDK+++A E+S+M I
Sbjct: 61 RDAIRGGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 117
>gi|319405400|emb|CBI79019.1| Flagellar hook-basal body complex protein fliE [Bartonella sp. AR
15-3]
Length = 114
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALR 93
+ +SF +L ++ + ++ AE++S+ + G +RE V+ +M AER+L+ +IALR
Sbjct: 40 GNKVSFDQVLSEIVEVVGTKLQTAESLSIGRISGNDVGVREVVNSVMAAERSLSTAIALR 99
Query: 94 DKILSAVSEVSKMQI 108
DK++ A EVS+MQI
Sbjct: 100 DKLVQAYLEVSRMQI 114
>gi|83309715|ref|YP_419979.1| flagellar hook-basal body protein FliE [Magnetospirillum magneticum
AMB-1]
gi|82944556|dbj|BAE49420.1| Flagellar hook-basal body protein [Magnetospirillum magneticum
AMB-1]
Length = 103
Score = 76.7 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
T++ ++ + S EG + F+++L+D AK A+GD + AE S++A+ G
Sbjct: 6 TDAISAYKTAANPFESVGKTSETEGNGT--DFASVLKDAAKVAVGDAKTAEKASMSAIAG 63
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
K +RE V + AE TL + +RDK+++A +E+ +M I
Sbjct: 64 KADIREVVAAVANAEMTLETVVNVRDKVINAYNEILRMPI 103
>gi|23016626|ref|ZP_00056380.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 103
Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
T++ ++ + S EG + F+++L+D AK A+GD + AE S++A+ G
Sbjct: 6 TDAISAYKSAANPFESVGKTSETEGNGT--DFASVLKDAAKVAVGDAKSAEKASMSAIAG 63
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
K +RE V + AE TL + +RDK+++A +E+ +M I
Sbjct: 64 KADIREVVAAVANAEMTLETVVNVRDKVINAYNEILRMPI 103
>gi|23008563|ref|ZP_00049956.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 116
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNS---------NEEGGSSPISFSALLQDMAKGAI 52
MIE + +F T Q + ++P F ++ +A A
Sbjct: 1 MIEALTSLAAFDKVAGTSFAETAPAQKAVFSPAAVAGIAGPAAAPTDFGDVMAQVAASAR 60
Query: 53 GDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E ++A +QG+ + ++ V+ +M AE++L +A+RDK+++A E+S+M I
Sbjct: 61 DALRGGEATAIAGIQGRATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 116
>gi|209964220|ref|YP_002297135.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
gi|209957686|gb|ACI98322.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
Length = 102
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF LL+ A+ +I M+ E S+ + GK + + V + AE TL + +RD++++
Sbjct: 33 SFGDLLRHAAEESIDTMKLGEQKSIEGIVGKADLADVVTAVSNAEVTLQAVVNVRDRVIT 92
Query: 99 AVSEVSKMQI 108
A E+ +M I
Sbjct: 93 AYQEILRMPI 102
>gi|83944176|ref|ZP_00956632.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
gi|83845043|gb|EAP82924.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
Length = 105
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+ G +P F+ ++ D A A+ + + + +++ L G+ S++E V M E+T+ +S+
Sbjct: 28 KPAGPAPKDFAQMVGDAASQAVDSVREGDQMAIKGLTGQASLQEVVQATMAMEQTVQVSV 87
Query: 91 ALRDKILSAVSEVSKMQI 108
ALRDK++ A EV +M +
Sbjct: 88 ALRDKLVEAYQEVMRMPV 105
>gi|254501297|ref|ZP_05113448.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
gi|222437368|gb|EEE44047.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
Length = 112
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 2 MIEQIQGTNSFISHTDTI--GMRYDFTQNSNEEGGSSPIS---FSALLQDMAKGAIGDME 56
MI +I S S + + ++ E GG+ +S FS + ++++ AI ++
Sbjct: 1 MINEISALTSAASSDGILKSSSTTRYMNSTPELGGTEAVSGPSFSDAMAEVSQSAIDKVK 60
Query: 57 KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E ++A + G+ S+++ V+ +MQAE TL +IA+RDK+++A E+S+M I
Sbjct: 61 NGEAAAIAGVDGQASVQQVVEAVMQAESTLQTAIAIRDKVVTAYQEISRMTI 112
>gi|121601933|ref|YP_989401.1| flagellar hook-basal body complex protein FliE [Bartonella
bacilliformis KC583]
gi|120614110|gb|ABM44711.1| flagellar hook-basal body complex protein FliE [Bartonella
bacilliformis KC583]
Length = 110
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIAL 92
G++ SF +L + + ++KAE++S+ + G +RE V +M+AE++L+ +IAL
Sbjct: 35 GANTASFDQVLAKITESVGTKLQKAESLSMGKISGNDIGVREIVSSVMEAEQSLSTAIAL 94
Query: 93 RDKILSAVSEVSKMQI 108
RDK++ A EVS+MQI
Sbjct: 95 RDKMVQAYLEVSRMQI 110
>gi|158422259|ref|YP_001523551.1| flagellar hook-basal body protein FliE [Azorhizobium caulinodans
ORS 571]
gi|158329148|dbj|BAF86633.1| flagellar hook-basal body complex protein [Azorhizobium caulinodans
ORS 571]
Length = 109
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
MIE + +S + +I T + G F +L + A+ + + E
Sbjct: 1 MIETVSALSSSLRTPTSISSTKMETTETKLTALNGQQGADFGDVLASVTTDAMKTVRQGE 60
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+AA+QGK S+++ V+ +M AE+TL +IA+RDK+++A EVS+M I
Sbjct: 61 AAGIAAIQGKASIQQVVEAVMSAEQTLQTAIAVRDKVVAAYQEVSRMAI 109
>gi|83955123|ref|ZP_00963779.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
gi|83840452|gb|EAP79625.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
Length = 105
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+ G +P F+ ++ D A A+ + + + +++ L G+ S++E V M E+T+ +S+
Sbjct: 28 KPAGPAPKDFAQMVGDAASQAVESVREGDQMAIKGLTGQASLQEVVQATMAMEQTVQVSV 87
Query: 91 ALRDKILSAVSEVSKMQI 108
ALRDK++ A EV +M +
Sbjct: 88 ALRDKLVEAYQEVMRMPV 105
>gi|163758014|ref|ZP_02165102.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
DFL-43]
gi|162284303|gb|EDQ34586.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
DFL-43]
Length = 114
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSN-------EEGGSSPISFSALLQDMAKGAIGD 54
MI+ I G + + + G S SFS ++Q + GA+ +
Sbjct: 1 MIDVITGAGATSRLAGSRETDVASSAAMPQMPQMPSAMGPQSSGSFSEVMQSLGVGAMNN 60
Query: 55 MEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ AE SLAA++G+ R+ VD +M ER+L + A+RDK+++A E+++MQI
Sbjct: 61 LKAAEAQSLAAVRGEAVTRDVVDAVMAGERSLQTATAIRDKLVTAYLEIARMQI 114
>gi|319406975|emb|CBI80612.1| Flagellar hook-basal body complex protein fliE [Bartonella sp.
1-1C]
Length = 112
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
M Q + +SF +L ++ + ++ AE++S+ + G +RE V+ +
Sbjct: 24 MSSLNGQQILPSVVGNNVSFDQVLSEVVEVVGTKLQTAESLSIDRISGSDVGVREVVNSV 83
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
M+AER+L+ +IALRDK++ A EVS+MQI
Sbjct: 84 MEAERSLSTAIALRDKLVQAYLEVSRMQI 112
>gi|319898636|ref|YP_004158729.1| flagellar hook-basal body complex protein fliE [Bartonella
clarridgeiae 73]
gi|319402600|emb|CBI76145.1| Flagellar hook-basal body complex protein fliE [Bartonella
clarridgeiae 73]
Length = 126
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALR 93
+ +SF +L ++ + ++ AE++S+ + G +RE V+ +M+AER+L+++IALR
Sbjct: 52 GNKVSFDEVLSEVVEVVGTKLQTAESLSIGRISGSDVGVREVVNSVMEAERSLSIAIALR 111
Query: 94 DKILSAVSEVSKMQI 108
DK++ A EVS+MQI
Sbjct: 112 DKLVQAYLEVSRMQI 126
>gi|319403960|emb|CBI77548.1| Flagellar hook-basal body complex protein fliE [Bartonella
rochalimae ATCC BAA-1498]
Length = 112
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 2 MIEQIQGT--NSFISHTDTIGMRYDFTQNSNEEGG--SSPISFSALLQDMAKGAIGDMEK 57
MIE ++ + + G + +SF +L ++ + ++
Sbjct: 1 MIEAFTSVVSHNTLDSLGQASKQMSSLNGQQILSGVVGNNVSFDQVLSEVVEVVGTKLQT 60
Query: 58 AENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE++S+ + G +RE V+ +M+AER+L+ +IALRDK++ A EVS+MQI
Sbjct: 61 AESLSIDRISGSDVGVREVVNSVMEAERSLSTAIALRDKLVQAYLEVSRMQI 112
>gi|217976224|ref|YP_002360371.1| flagellar hook-basal body complex protein FliE [Methylocella
silvestris BL2]
gi|217501600|gb|ACK49009.1| flagellar hook-basal body complex protein FliE [Methylocella
silvestris BL2]
Length = 104
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 51/103 (49%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
I + S + + + F +L ++ A+ ++ E ++
Sbjct: 2 IPALSLLGSIVGPAAAAVSPSTSVSAAATDGDAGFGHVLAQVSSDAVNSLKTGEATAILG 61
Query: 66 LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L+GK S+++ V+ +M AE++L+ +IA+RDK +SA +S+M I
Sbjct: 62 LEGKASVQQVVESVMSAEQSLHTAIAIRDKAVSAYQSISQMAI 104
>gi|86356311|ref|YP_468203.1| flagellar hook-basal body protein FliE [Rhizobium etli CFN 42]
gi|123513037|sp|Q2KCG0|FLIE_RHIEC RecName: Full=Flagellar hook-basal body complex protein FliE
gi|86280413|gb|ABC89476.1| flagellar hook-basal body protein [Rhizobium etli CFN 42]
Length = 113
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
T G ++ +SF+++L MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSAATTMPGTAGAANGLSFASVLGGMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|218516083|ref|ZP_03512923.1| flagellar hook-basal body protein FliE [Rhizobium etli 8C-3]
Length = 113
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ ++F++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSSAATMPGTAGAANGVNFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|328545506|ref|YP_004305615.1| flagellar hook-basal body complex protein FliE [polymorphum gilvum
SL003B-26A1]
gi|326415247|gb|ADZ72310.1| Flagellar hook-basal body complex protein FliE [Polymorphum gilvum
SL003B-26A1]
Length = 107
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI+Q+ + S + + + + G SFS L ++ AI ++ E
Sbjct: 1 MIDQLSALTASGSGLTSSVSQSRYVAAPAQADGVVEASFSDTLASVSMEAIERLKGGEAA 60
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+L+ +QGK S ++ V+ +M AE +L +IA+RDK++SA E+S+M I
Sbjct: 61 ALSGIQGKVSAQQVVEAVMAAEASLQTAIAIRDKVVSAYQEISRMTI 107
>gi|190890362|ref|YP_001976904.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
gi|226704239|sp|B3PPL9|FLIE_RHIE6 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|190695641|gb|ACE89726.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
Length = 113
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSSAATMPGTAGAANGVSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|170748108|ref|YP_001754368.1| flagellar hook-basal body complex protein FliE [Methylobacterium
radiotolerans JCM 2831]
gi|170654630|gb|ACB23685.1| flagellar hook-basal body complex protein FliE [Methylobacterium
radiotolerans JCM 2831]
Length = 110
Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
++ F LL +A ++ E +++ +QGK S + V+ +M AE++L ++A+R
Sbjct: 36 AAAASGFGDLLMQIAGQMRDTVKTGEAAAISGIQGKASTQAVVEAVMSAEQSLQTAVAIR 95
Query: 94 DKILSAVSEVSKMQI 108
DK+++A E+ +M I
Sbjct: 96 DKVVAAYLEIVRMAI 110
>gi|218672514|ref|ZP_03522183.1| flagellar hook-basal body protein FliE [Rhizobium etli GR56]
Length = 113
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 58/89 (65%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
T G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSSATTMPGTAGAANGMSFASVMGNMATEAVNSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|327193035|gb|EGE59947.1| flagellar hook-basal body protein FliE [Rhizobium etli CNPAF512]
Length = 113
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSSAATMPGTAGAANGMSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|163744320|ref|ZP_02151680.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
indolifex HEL-45]
gi|161381138|gb|EDQ05547.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
indolifex HEL-45]
Length = 110
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 50/89 (56%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
+ + EE G+S SF+ L+Q ++ A+ + E V+ A L+G+ ++ V+ +
Sbjct: 22 SLTGQKGEGIAEEAGASANSFTNLVQQASESALETVRGGEAVAQAGLRGEADTQQVVEAM 81
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E T+ +++++RD+ + A E+ +M I
Sbjct: 82 LAMESTVKVAVSVRDRFVEAYQEILRMPI 110
>gi|116250481|ref|YP_766319.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255129|emb|CAK06203.1| putative flagellar hook-basal body complex protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 101
Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 13 SASSSAATMPGAAGAANGMSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 72
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 73 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 101
>gi|83594156|ref|YP_427908.1| flagellar hook-basal body protein FliE [Rhodospirillum rubrum ATCC
11170]
gi|83577070|gb|ABC23621.1| Flagellar hook-basal body complex protein FliE [Rhodospirillum
rubrum ATCC 11170]
Length = 106
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 14 SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
S M + EG SF+++++ I + E S A++GK +R
Sbjct: 16 SRIGGAEMTGGLLPSGQPEGP----SFASMVKGAIDDTITAGRQGEAQSRLAIEGKADLR 71
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ V + AE TL +A+RDK+++A + +M I
Sbjct: 72 DVVMAVNNAESTLQTVVAVRDKVVNAYETILRMPI 106
>gi|209963542|ref|YP_002296457.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
gi|209957008|gb|ACI97644.1| flagellar hook-basal body complex protein FliE, putative
[Rhodospirillum centenum SW]
Length = 104
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
SF+ ++ K AI + E +S A LQGK S +E V +M AE T+ +
Sbjct: 27 TATAPERGSFAGFVETAVKSAIKTVRTGEEMSAAGLQGKASAQEVVQAVMSAEMTVQAVV 86
Query: 91 ALRDKILSAVSEVSKMQI 108
+RDK++SA ++ +M I
Sbjct: 87 TVRDKLVSAYLDIMRMGI 104
>gi|300024607|ref|YP_003757218.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526428|gb|ADJ24897.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
denitrificans ATCC 51888]
Length = 108
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAEN 60
M I + IS GS P SF+ L MA AI ++ E
Sbjct: 1 MSLSIAMLSPEISRIGGAAPTTTPAITPPASAGSVPQASFADTLASMATDAISTIKAGET 60
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A ++G+ S+++ V +M AE+TL +A+RDK++ A E+S+MQI
Sbjct: 61 TATAGMKGQASLQQVVQAVMMAEQTLQTVVAVRDKVVGAYQEISRMQI 108
>gi|115523178|ref|YP_780089.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisA53]
gi|115517125|gb|ABJ05109.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisA53]
Length = 106
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNE--EGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
+ +S S + D Q+++ G S + F +L+ +A AIG M+ E S+
Sbjct: 2 LDAVSSMTSSVSGVAKSSDVAQSASALAPTGGSAVGFDGVLEQVAADAIGSMKAGEAASI 61
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+++QGK S + V+ +M AERTL +++A+RDK++ A EVS+M I
Sbjct: 62 SSIQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106
>gi|144900467|emb|CAM77331.1| flagellar hook-basal body complex protein FliE [Magnetospirillum
gryphiswaldense MSR-1]
Length = 105
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIM 80
+ + + F+++L+D AK ++ +++ E S AA+ GK +RE V +
Sbjct: 18 PSAEGMEARDTPTPVPGSDFASVLKDAAKMSLNAVKQGEQASAAAIAGKADIREVVAAVN 77
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
AE TL + +RDK+++A +E+ +M I
Sbjct: 78 NAEMTLETVVTVRDKVINAYNEILRMPI 105
>gi|241203105|ref|YP_002974201.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856995|gb|ACS54662.1| flagellar hook-basal body complex protein FliE [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 113
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 STSSSAATMPGAAGAANGMSFASVMGNMASDAVSSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|209547927|ref|YP_002279844.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226704240|sp|B5ZQD7|FLIE_RHILW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|209533683|gb|ACI53618.1| flagellar hook-basal body complex protein FliE [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 113
Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G ++ +SF++++ +MA A+ ++ AE++S A ++G + RE VD +
Sbjct: 25 SASSSAATMPGTAGAANNMSFASVMGNMASDAVSSLKGAESMSFAGIKGTATTREVVDSM 84
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+QAE+TL +IA+RDK++SA EV+KMQ+
Sbjct: 85 LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113
>gi|114706770|ref|ZP_01439670.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
HTCC2506]
gi|114537718|gb|EAU40842.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
HTCC2506]
Length = 108
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
FS +L + A ++ AE S+ + GK S + V+ +M AERTL ++A+RDK ++A
Sbjct: 40 FSEVLSRVMVDAADTVKTAEATSIQGVNGKASTQAVVEAVMSAERTLQTAVAVRDKAVAA 99
Query: 100 VSEVSKMQI 108
E+S+MQI
Sbjct: 100 YMELSRMQI 108
>gi|304392507|ref|ZP_07374447.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
R2A130]
gi|303295137|gb|EFL89497.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
R2A130]
Length = 103
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI+ I T + + + ISF+ +L A+ + AE +
Sbjct: 1 MIDPISATAA----SSAGQTAATALAKPPVTNAPTGISFAEMLGSQAQNLSNGLHGAEAI 56
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + G+T +R+ D +M+AER++ ++ +RDKI++A ++S+M I
Sbjct: 57 AAQGMTGETGIRQVADAVMEAERSMQAAVVVRDKIVAAWLDISRMAI 103
>gi|254473498|ref|ZP_05086895.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
gi|211957614|gb|EEA92817.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
Length = 118
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 48/70 (68%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF+ + D+ + GD++ AE S+AA++G+ S ++ V+ +M+AE +L ++A+RDK++
Sbjct: 49 SFADTMADVVRETAGDLKTAEATSVAAVRGEVSAQKVVEAVMKAELSLKSAVAVRDKVVE 108
Query: 99 AVSEVSKMQI 108
A E S+M I
Sbjct: 109 AYQEFSRMSI 118
>gi|114765222|ref|ZP_01444354.1| flagellar hook-basal body protein FliE [Pelagibaca bermudensis
HTCC2601]
gi|114542357|gb|EAU45385.1| flagellar hook-basal body protein FliE [Roseovarius sp. HTCC2601]
Length = 109
Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF+ ++ A+ + +AE + L+G + V+ ++ + T+ ++A+RDK++
Sbjct: 40 SFADMVAQAGSDAVQTIREAEVTAQTGLRGNADTQAVVEATLELDSTVKTAVAVRDKLVE 99
Query: 99 AVSEVSKMQI 108
A E+ +M I
Sbjct: 100 AYQEIIRMPI 109
>gi|319409188|emb|CBI82832.1| Flagellar hook-basal body complex protein fliE [Bartonella
schoenbuchensis R1]
Length = 114
Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALR 93
SS +SFS +L ++ A ++ AE++S+ +L G +RE V+ +M+AER+L+ +IALR
Sbjct: 40 SSSVSFSKILSEVVGTAEMKLQNAESLSIGSLAGNDVGVREVVNSVMEAERSLSTAIALR 99
Query: 94 DKILSAVSEVSKMQI 108
DK++ A EVS+MQI
Sbjct: 100 DKMVQAYLEVSRMQI 114
>gi|116246261|ref|XP_001230417.1| Anopheles gambiae str. PEST AGAP012889-PA [Anopheles gambiae str.
PEST]
gi|116133285|gb|EAU77928.1| AGAP012889-PA [Anopheles gambiae str. PEST]
Length = 141
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
+ E S SFS +L D K A+ + AE + L G M + + +A+ TL
Sbjct: 60 AEAAEPSNDSVTSFSNVLGDALKNAVHVGKTAETQAATGLSGGGDMTDIATSVAEAKLTL 119
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+RD+ + A ++ KM I
Sbjct: 120 QTVTTVRDRFVQAYQDIMKMSI 141
>gi|27381985|ref|NP_773514.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
USDA 110]
gi|38502984|sp|Q89F27|FLIE2_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 2
gi|27355155|dbj|BAC52139.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
USDA 110]
Length = 109
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 2 MIEQIQGT--NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
M+E I T ++ + + + + F ++++ + AIG ++ E
Sbjct: 1 MLEAISSTAISAGQAASRATETQAIAPAAPTAIQSGGDVGFDSVMKQVTTDAIGTLKAGE 60
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S++A+QGK S R V+ +M AE+ L ++A+RDK++ A EV +M I
Sbjct: 61 AASISAMQGKESTRRVVEALMSAEQALQTAVAVRDKVVQAYQEVVRMSI 109
>gi|312115250|ref|YP_004012846.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
vannielii ATCC 17100]
gi|311220379|gb|ADP71747.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
vannielii ATCC 17100]
Length = 102
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
+ G++ FS++L + + D++ E+V+ A LQG+ S +E V + +AE
Sbjct: 19 ALEKKTASAGAATTDFSSVLAALGQQTAVDVKAGESVAAAGLQGRASTQEVVQAVSKAEL 78
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+L ++A+RDK +SA E+++M I
Sbjct: 79 SLQAALAVRDKAVSAYQELTRMTI 102
>gi|89068703|ref|ZP_01156089.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
gi|89045666|gb|EAR51728.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
Length = 109
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
I TN+ + E + P SFS+ +Q A A+G + +A+ A
Sbjct: 6 SIVSTNAVRGAYRSAQTLNGERPPLAEGQAAKPDSFSSFVQTAATDAVGTVREADAAMKA 65
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ + V+ + E T+ +++++RDK++ A +V +M I
Sbjct: 66 GVTGEMDTQAVVEATLALESTVKVAVSVRDKVVEAYQQVMQMPI 109
>gi|84502402|ref|ZP_01000538.1| flagellar biosynthesis protein [Oceanicola batsensis HTCC2597]
gi|84389214|gb|EAQ02011.1| flagellar biosynthesis protein [Oceanicola batsensis HTCC2597]
Length = 108
Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREA 75
+ ++ Q + G + ++F+ L++D A+G++ + +AE V A + G+ S ++
Sbjct: 16 SSSRLQGGPGQLAGAAGDADKVNFAELVRDAAQGSMQTIREAEQVQQAGMVGENVSAQQV 75
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V+ ++ E TL L++++RD+++ A ++ +M I
Sbjct: 76 VEATLEMETTLRLAVSVRDRLVEAYQQIMQMPI 108
>gi|126730137|ref|ZP_01745949.1| putative flagellar hook-basal body complex protein [Sagittula
stellata E-37]
gi|126709517|gb|EBA08571.1| putative flagellar hook-basal body complex protein [Sagittula
stellata E-37]
Length = 97
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+Y ++ + E + P A + + + + AE S A+ G V+
Sbjct: 8 AAQKYAASRPAMEPDSADPTKMEADFARVTEDFVQQLRAAEETSQEAMTGDADPHALVEA 67
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ Q+E + +A+RDK++ A E+ +M +
Sbjct: 68 LAQSELAVETVVAVRDKVVEAYQEILRMPV 97
>gi|89069821|ref|ZP_01157156.1| putative flagellar hook-basal body complex protein [Oceanicola
granulosus HTCC2516]
gi|89044622|gb|EAR50738.1| putative flagellar hook-basal body complex protein [Oceanicola
granulosus HTCC2516]
Length = 94
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 40/91 (43%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
+ + + + P + + + +A + + +E ++AA+ G V
Sbjct: 4 PSSLVANAYETNRAATAPGPDAGGSPVGQLADDFLATLRASEETAMAAMTGDADPHALVQ 63
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ Q E L ++A+R+K++ A E+ +M +
Sbjct: 64 ALAQTELALEAAVAVRNKVVEAYQEILRMPV 94
>gi|288962708|ref|YP_003453002.1| FliE protein [Azospirillum sp. B510]
gi|288914974|dbj|BAI76458.1| FliE protein [Azospirillum sp. B510]
Length = 119
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
S ++ ++ + F L A+ ++++E VSLAA+ G
Sbjct: 20 IASGVAEAQAATSPLSAAGRTDAVAAGAESDFGGFLDKSISQAVDTLKESERVSLAAVSG 79
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
K S ++ V ++ AE T+ +A+RDK++ A E+ ++ +
Sbjct: 80 KASAQDVVRSVLAAEMTVQSVVAIRDKMVQAYQEIMRIAV 119
>gi|296534149|ref|ZP_06896645.1| flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
gi|296265525|gb|EFH11654.1| flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
Length = 106
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF A+L+ + + A+ S+ L+G+ E V + +AE L ++A+RD+++S
Sbjct: 37 SFGAMLERAVEKVVDTTRAADVASVQGLRGEVGATEVVLAVSRAELALQTTVAVRDRVVS 96
Query: 99 AVSEVSKMQI 108
A EV +M +
Sbjct: 97 AYQEVMRMSL 106
>gi|154253014|ref|YP_001413838.1| flagellar hook-basal body complex subunit FliE [Parvibaculum
lavamentivorans DS-1]
gi|154156964|gb|ABS64181.1| flagellar hook-basal body complex subunit FliE [Parvibaculum
lavamentivorans DS-1]
Length = 107
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ I + + ++ GM + F +L+ + + E +
Sbjct: 1 MTTIPASTALNAYARAAGMGGGAQSPQTGGLKEAGGGFGDMLKQALDETVETSKSGE-MK 59
Query: 63 LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+AAL G ++ + V + +AE TL + +RDK+++A E+ +M I
Sbjct: 60 MAALTGTRDGNIVDVVTAVAEAETTLQTVVTVRDKVIAAYQEILRMPI 107
>gi|254470039|ref|ZP_05083443.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
gi|211960350|gb|EEA95546.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
JE062]
Length = 114
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 45/105 (42%)
Query: 4 EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
+ I S + + + E G +F ++Q + A+ SL
Sbjct: 10 DTIMSNASIAASAYANTAKLSNPLEAASETGDKSGAFGNMVQSAISEINESGQIADVQSL 69
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
LQGK ++ + V + + E L +++RD+++SA E+ +M I
Sbjct: 70 DLLQGKANVVDVVTAVAETELALETVVSVRDRVISAYEEIMRMPI 114
>gi|328543167|ref|YP_004303276.1| flagellar hook-basal body protein FliE [polymorphum gilvum
SL003B-26A1]
gi|326412913|gb|ADZ69976.1| Flagellar hook-basal body protein FliE [Polymorphum gilvum
SL003B-26A1]
Length = 100
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 43/88 (48%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIM 80
M + + E +S + F L+++ + + + ++ +QGK + + V I
Sbjct: 13 MAARLARQAEAETPTSSVDFGGLVREAVNSVVEKGRETDQKTIGLVQGKADVVDVVTAIA 72
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E L +++RD+++SA E+ +M I
Sbjct: 73 ETEVALETMVSVRDRVISAYEEIMRMPI 100
>gi|329890581|ref|ZP_08268924.1| flagellar hook-basal body complex protein FliE [Brevundimonas
diminuta ATCC 11568]
gi|328845882|gb|EGF95446.1| flagellar hook-basal body complex protein FliE [Brevundimonas
diminuta ATCC 11568]
Length = 107
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G ++ F+ LLQ++ AE ++QG+ ++ + V I AE +L +A+
Sbjct: 32 GPNAAGGFADLLQNVMTQTTQQTRAAETQMAQSVQGQGNLIDVVTAISSAEASLETVMAV 91
Query: 93 RDKILSAVSEVSKMQI 108
RD+++SA E+ +M I
Sbjct: 92 RDQVISAYQEIMRMPI 107
>gi|58039960|ref|YP_191924.1| flagellar hook-basal body protein FleE [Gluconobacter oxydans 621H]
gi|58002374|gb|AAW61268.1| Flagellar hook-basal body protein FleE [Gluconobacter oxydans 621H]
Length = 115
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKI 96
F ++L I AE + L G M + V + A+ L + +RD++
Sbjct: 44 GTDFGSILSQSVSSVIDGGHDAETKAAQGLTGGGDMTQIVTAVSNAQLALQTTTVIRDRM 103
Query: 97 LSAVSEVSKMQI 108
+ A +V KM I
Sbjct: 104 VQAYQDVMKMTI 115
>gi|296531768|ref|ZP_06894590.1| possible flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
gi|296267907|gb|EFH13712.1| possible flagellar hook-basal body complex protein FliE [Roseomonas
cervicalis ATCC 49957]
Length = 96
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAE 83
+ S FS ++ D A+ ++ + +AE S + G ++E V AE
Sbjct: 12 SAALRAYGATASPAGDFSTMVGDAARASLQTLRQAELASARGVAGTADVQEVVQAAANAE 71
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
T+ LRDKI++A +V +M +
Sbjct: 72 LTVQTMTQLRDKIVTAYMDVLRMAV 96
>gi|197104392|ref|YP_002129769.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
zucineum HLK1]
gi|196477812|gb|ACG77340.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
zucineum HLK1]
Length = 103
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
+ F +L+ AI +AE A +QGK + + V I AE +L +A+R
Sbjct: 29 PGAGPGFGEILKAAMGDAIQASRQAETQMAAQVQGKAELVDVVTAISAAEASLETVLAVR 88
Query: 94 DKILSAVSEVSKMQI 108
D+++SA E+ +M I
Sbjct: 89 DQVISAYKEILQMPI 103
>gi|220925379|ref|YP_002500681.1| flagellar hook-basal body complex protein FliE [Methylobacterium
nodulans ORS 2060]
gi|219949986|gb|ACL60378.1| flagellar hook-basal body complex protein FliE [Methylobacterium
nodulans ORS 2060]
Length = 100
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
+ + S + F LL G ++E +A GK ++ + V + ++
Sbjct: 15 QNLGRLSPTRPAAPEGGFGQLLTAAVDGVAEAGRRSEQQMMAVGAGKANIVDVVTAVAES 74
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
E L +A+RD+++SA ++ +MQI
Sbjct: 75 ETALQTLVAVRDRVISAYEDIMRMQI 100
>gi|315498434|ref|YP_004087238.1| flagellar hook-basal body complex protein flie [Asticcacaulis
excentricus CB 48]
gi|315416446|gb|ADU13087.1| flagellar hook-basal body complex protein FliE [Asticcacaulis
excentricus CB 48]
Length = 102
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
+ + +FS +L + + + AE+ +A QGK + +AV
Sbjct: 11 GAVQKQVSGLHEEGSRTQDVGAAFSKVLNGAMEQTMKSTQNAESQMIAHSQGKAELIDAV 70
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ AE +L IA+RD+++SA E+ +M I
Sbjct: 71 TAVASAEASLESVIAIRDQVISAYQEILRMPI 102
>gi|294679034|ref|YP_003579649.1| flagellar hook-basal body complex protein FliE [Rhodobacter
capsulatus SB 1003]
gi|294477854|gb|ADE87242.1| flagellar hook-basal body complex protein FliE [Rhodobacter
capsulatus SB 1003]
Length = 98
Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 38/86 (44%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
+ G+S L +A + M+++E+ + AA+ G V + Q
Sbjct: 13 AQARSAATPLAGNSTADRDGGLGKIATSFLETMQQSEDTAKAAMLGNADPHTLVQALAQT 72
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
E + ++ +R+K++ A E+ +M +
Sbjct: 73 ELAVETAVTVRNKVVEAYQEILRMPV 98
>gi|118588699|ref|ZP_01546107.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
gi|118438685|gb|EAV45318.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
12614]
Length = 106
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+ + ++ + + F AL+ + G + A++ ++ ++GK + + V
Sbjct: 17 LQQQARAIEDKAGAPEVAGLDFGALVNEAVGGVVDKGRVADDKAVGLVEGKADVVDVVTA 76
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
I + E L +A+RD+++SA E+ +M I
Sbjct: 77 IAETEVALETMVAVRDRVISAYEEIMRMPI 106
>gi|206890164|ref|YP_002248114.1| flagellar hook-basal body complex protein (FliE)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742102|gb|ACI21159.1| flagellar hook-basal body complex protein (FliE)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 97
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
+ Q+ E G+ SF L+D K A ++A+N A +G+ S+ + V +
Sbjct: 9 ELLGKSLQDLKELQGTQKESFEQALKDAIKEASQVEQEAQNAIEAFSKGELSIHQVVLAM 68
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ TL I +R+K+L+A E+S+MQ+
Sbjct: 69 EKADMTLQTLIQVRNKVLTAYEEISRMQV 97
>gi|85706170|ref|ZP_01037265.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. 217]
gi|85669334|gb|EAQ24200.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. 217]
Length = 96
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
T +Y T+ + E A Q++AK +++ E V+ +A+ GK V
Sbjct: 7 TAAQKYTATRTATEPALGQGTG-GAAFQNIAKDFAATLKEGEEVAKSAMIGKADPHSLVQ 65
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ Q E + I +RD+++ A E+ +M +
Sbjct: 66 ALAQTELAVEAVITVRDRVVEAYQEILRMPV 96
>gi|163852026|ref|YP_001640069.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
extorquens PA1]
gi|218530780|ref|YP_002421596.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
chloromethanicum CM4]
gi|240139293|ref|YP_002963768.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|254561749|ref|YP_003068844.1| flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
gi|163663631|gb|ABY30998.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
extorquens PA1]
gi|218523083|gb|ACK83668.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
chloromethanicum CM4]
gi|240009265|gb|ACS40491.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens AM1]
gi|254269027|emb|CAX24988.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
extorquens DM4]
Length = 107
Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+G ++P F+ LQ +A+ +L+A GK ++ + V + ++E L +
Sbjct: 30 AQGLTAPGGFTGFLQQSLDNVAQSGAQADRAALSAATGKANVVDVVTAVAESETALQTLV 89
Query: 91 ALRDKILSAVSEVSKMQI 108
A+RD+++SA E+ +M I
Sbjct: 90 AVRDRVISAYEEIMRMPI 107
>gi|99082803|ref|YP_614957.1| flagellar hook-basal body protein FliE [Ruegeria sp. TM1040]
gi|99039083|gb|ABF65695.1| Flagellar hook-basal body complex protein fliE [Ruegeria sp.
TM1040]
Length = 98
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
+P S + + + +E VS+ A+ G + V + Q E + ++ +R+K
Sbjct: 26 NPTSLQEQAKTSFQDFTNTLAHSEQVSVQAMTGGADPHQLVQALAQTELAVETAVTVRNK 85
Query: 96 ILSAVSEVSKMQI 108
++ A E+ +M +
Sbjct: 86 VVEAYQEILRMPV 98
>gi|170748651|ref|YP_001754911.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
radiotolerans JCM 2831]
gi|170655173|gb|ACB24228.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
radiotolerans JCM 2831]
Length = 104
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 42/89 (47%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
G+ + + F +L +A++ +++A GK ++ + V +
Sbjct: 16 GLAGGRPAPRVQPTTGTGTDFMQMLGQTLDSVGDAGRRADSQAVSAAAGKANVVDVVTAV 75
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
++E L +A+RD+++SA E+ +MQI
Sbjct: 76 AESETALQTMVAVRDRMISAYEEIMRMQI 104
>gi|329849686|ref|ZP_08264532.1| flagellar hook-basal body complex protein FliE family protein
[Asticcacaulis biprosthecum C19]
gi|328841597|gb|EGF91167.1| flagellar hook-basal body complex protein FliE family protein
[Asticcacaulis biprosthecum C19]
Length = 103
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
F +LQ + + + AE++ + G+ + +AV + AE L IA+RD+++S
Sbjct: 34 DFGKILQGAMEQTMKSTQTAEHMMVQQQAGQAELIDAVTAVSSAELQLQSVIAIRDQVIS 93
Query: 99 AVSEVSKMQI 108
A E+ +M I
Sbjct: 94 AYQEIMRMPI 103
>gi|119384844|ref|YP_915900.1| flagellar hook-basal body complex protein FliE [Paracoccus
denitrificans PD1222]
gi|119374611|gb|ABL70204.1| flagellar hook-basal body complex protein FliE [Paracoccus
denitrificans PD1222]
Length = 92
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERT 85
Q + ++ F+ +++ + A G A+ G+T + V I +AE
Sbjct: 21 AQGLPQGVTNAAADFARVMEQVDLDAAG-----------AMTGQTDTHDLVHSIARAEIA 69
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
L +A+RDK++ A E+ +M +
Sbjct: 70 LETVVAIRDKVVEAYQEILRMPV 92
>gi|254488457|ref|ZP_05101662.1| flagellar hook-basal body complex protein FliE [Roseobacter sp.
GAI101]
gi|214045326|gb|EEB85964.1| flagellar hook-basal body complex protein FliE [Roseobacter sp.
GAI101]
Length = 65
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 34/65 (52%)
Query: 44 LQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
++DMA + + ++++ ++ G V + Q E + ++A+R+K++ A E+
Sbjct: 1 MKDMALDFADTLARGDHIAKESMIGDADPHALVQALAQTELVVETAVAVRNKVVEAYQEI 60
Query: 104 SKMQI 108
+M +
Sbjct: 61 LRMPV 65
>gi|254502943|ref|ZP_05115094.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
gi|222439014|gb|EEE45693.1| flagellar hook-basal body complex protein FliE [Labrenzia
alexandrii DFL-11]
Length = 104
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ F ++Q + + A+ ++ ++GKT + + V + +AE TL +A+RD+++
Sbjct: 34 VDFGQMVQSAVENVVDQGRVADAKAVGLIEGKTDVVDVVTAVAEAEVTLETMVAVRDRVI 93
Query: 98 SAVSEVSKMQI 108
SA E+ +M I
Sbjct: 94 SAYEEIMRMPI 104
>gi|259417298|ref|ZP_05741217.1| flagellar hook-basal body protein FliE [Silicibacter sp. TrichCH4B]
gi|259346204|gb|EEW58018.1| flagellar hook-basal body protein FliE [Silicibacter sp. TrichCH4B]
Length = 98
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 34/73 (46%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
+P S + + + +E VS+ ++ G + V + Q E + ++ +R+K
Sbjct: 26 NPASLQEQAKTSFQDFTNTLAHSEQVSVQSMTGGADPHQLVQALAQTELAVETAVTVRNK 85
Query: 96 ILSAVSEVSKMQI 108
++ A E+ +M +
Sbjct: 86 VVEAYQEILRMPV 98
>gi|16125207|ref|NP_419771.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
CB15]
gi|221233943|ref|YP_002516379.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
NA1000]
gi|38503159|sp|Q9A9M3|FLIE_CAUCR RecName: Full=Flagellar hook-basal body complex protein FliE
gi|13422231|gb|AAK22939.1| flagellar hook-basal body complex protein FliE [Caulobacter
crescentus CB15]
gi|220963115|gb|ACL94471.1| flagellar hook-basal body complex protein FliE [Caulobacter
crescentus NA1000]
Length = 103
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKI 96
+ F LL+ GA + AE+ A + GK + + V I AE +L +++RD++
Sbjct: 32 GVDFGDLLKSAMDGATKASKVAEHKIAAQVAGKAELVDVVTAISSAEASLETVMSIRDQV 91
Query: 97 LSAVSEVSKMQI 108
+SA E+ +M I
Sbjct: 92 ISAYQEIMRMPI 103
>gi|188581883|ref|YP_001925328.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
populi BJ001]
gi|179345381|gb|ACB80793.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
populi BJ001]
Length = 106
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
+G ++P F+ LQ +A+ +L+A GK ++ + V + ++E L +
Sbjct: 29 AQGLTAPGGFTGFLQQSLDSVAQSGAQADRAALSAATGKANVVDVVTAVAESETALQTLV 88
Query: 91 ALRDKILSAVSEVSKMQI 108
A+RD+++SA E+ +M I
Sbjct: 89 AVRDRVISAYEEIMRMPI 106
>gi|147678425|ref|YP_001212640.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
SI]
gi|146274522|dbj|BAF60271.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
SI]
Length = 95
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
Q + + + SFS +LQD K KA+N++ L G+ + + + +A T
Sbjct: 13 QPAGGKQEAGGSSFSEMLQDALKKVNDAQVKADNLARQLLTGEVQDIHQVTVAMQEARLT 72
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ L++ +R+KI+ A E+S+MQ+
Sbjct: 73 MQLAVEVRNKIIEAYQEISRMQV 95
>gi|295690697|ref|YP_003594390.1| flagellar hook-basal body complex subunit FliE [Caulobacter segnis
ATCC 21756]
gi|295432600|gb|ADG11772.1| flagellar hook-basal body complex subunit FliE [Caulobacter segnis
ATCC 21756]
Length = 103
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
+ + F +L+ A + AE+ + GK + + V I AE +L +++RD+
Sbjct: 31 NGLDFGDILKSAMTDAAKASKVAEHKIADQVAGKAELVDVVTAISSAEASLETVMSVRDQ 90
Query: 96 ILSAVSEVSKMQI 108
++SA E+ +M I
Sbjct: 91 VISAYQEIMRMPI 103
>gi|83589622|ref|YP_429631.1| flagellar hook-basal body complex protein (FliE) [Moorella
thermoacetica ATCC 39073]
gi|83572536|gb|ABC19088.1| flagellar hook-basal body complex protein (FliE) [Moorella
thermoacetica ATCC 39073]
Length = 102
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
+S ++ + + SF LL+ ++A+ ++ GK
Sbjct: 6 VSLLMPAPLQETRPVSQTGGTDAVAQSFGNLLRQKLDELNNLQQQADALTQEYFAGKVED 65
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + +A +L L++ +R+K + A E+S+MQI
Sbjct: 66 VHQVMLALEEANLSLQLAMQVRNKAVEAYQEISRMQI 102
>gi|114799787|ref|YP_759002.1| flagellar hook-basal body complex protein FliE [Hyphomonas
neptunium ATCC 15444]
gi|114739961|gb|ABI78086.1| flagellar hook-basal body complex protein FliE [Hyphomonas
neptunium ATCC 15444]
Length = 99
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 37/90 (41%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+ ++ + G +P + + + M++AE ++ V+
Sbjct: 10 TALSTPRPTDTAKPAGDAPEAAGSKFAETISDFRTTMQEAEQTAMQTAVSGADPHAMVEA 69
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ AE L+ + +RDK++ A E+ +M +
Sbjct: 70 LTNAELMLDAVVTIRDKVVEAYQELLRMPV 99
>gi|168187559|ref|ZP_02622194.1| flagellar hook-basal body complex protein [Clostridium botulinum C
str. Eklund]
gi|169294575|gb|EDS76708.1| flagellar hook-basal body complex protein [Clostridium botulinum C
str. Eklund]
Length = 103
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N FI + Q + + F +L+ ++E ++ ++G
Sbjct: 3 INDFIPSSGIYSKVDSLNQQKPKNIIDEKLGFEDILKGQLDKVNEKQLESEKITDDFIKG 62
Query: 69 K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + +A+ ++ L++ +R+K+L A E+++MQ+
Sbjct: 63 EDVEVHDVMIKNEEAKLSMQLAVQVRNKLLEAYQEINRMQV 103
>gi|148380621|ref|YP_001255162.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. ATCC 3502]
gi|153932224|ref|YP_001384907.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
str. ATCC 19397]
gi|153936171|ref|YP_001388376.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
str. Hall]
gi|148290105|emb|CAL84224.1| flagellar hook-basal body complex protein [Clostridium botulinum A
str. ATCC 3502]
gi|152928268|gb|ABS33768.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. ATCC 19397]
gi|152932085|gb|ABS37584.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A str. Hall]
Length = 104
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + +SFS +L+D G KA+N + A ++G +T + + + +A
Sbjct: 19 NFINKNEKTENTKSVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDETDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|170761355|ref|YP_001787984.1| flagellar hook-basal body protein FliE [Clostridium botulinum A3
str. Loch Maree]
gi|169408344|gb|ACA56755.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A3 str. Loch Maree]
Length = 104
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + +SFS +L+D GA KA N + A ++G + + + + +A
Sbjct: 19 NFINKNEKTENTESVSFSEILKDKLDGANAKQVKANNSTEAFIKGDEIDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|168183268|ref|ZP_02617932.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Bf]
gi|237796103|ref|YP_002863655.1| flagellar hook-basal body protein FliE [Clostridium botulinum Ba4
str. 657]
gi|182673620|gb|EDT85581.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Bf]
gi|229261204|gb|ACQ52237.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum Ba4 str. 657]
Length = 104
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + +SFS +L+D G KA+N + A ++G + + + + +A
Sbjct: 19 NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDEVDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|254462226|ref|ZP_05075642.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
bacterium HTCC2083]
gi|206678815|gb|EDZ43302.1| flagellar hook-basal body complex protein FliE [Rhodobacteraceae
bacterium HTCC2083]
Length = 97
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+Y ++ + E + S + K + ++EN++ AA+ G V
Sbjct: 8 ASQQYAASKPATEPKETKQTEISESFTNTFKDLSTTLAESENIAKAAMAGDADPHALVQA 67
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ Q E + ++ +R+K++ A E+ +M +
Sbjct: 68 LAQTELAVEAAVNVRNKVVEAYQEILRMPV 97
>gi|168180912|ref|ZP_02615576.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum NCTC 2916]
gi|182668256|gb|EDT80235.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum NCTC 2916]
gi|322806994|emb|CBZ04564.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum H04402 065]
Length = 104
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + +SFS +L+D G KA+N + A ++G +T + + + +A
Sbjct: 19 NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDETDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|260431751|ref|ZP_05785722.1| flagellar hook-basal body protein FliE [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415579|gb|EEX08838.1| flagellar hook-basal body protein FliE [Silicibacter
lacuscaerulensis ITI-1157]
Length = 96
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 18 TIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
TI + + + L+ + ++ +EN++ AA+ G+ V
Sbjct: 5 TISAAQSYAHARPATQADPDHVGSGQGLRATFQDFAATLKNSENIASAAMVGQADPHALV 64
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ Q E + ++ +R+K++ A E+ +M +
Sbjct: 65 QALAQTELAVETAVVVRNKVVEAYQEILRMPV 96
>gi|260893876|ref|YP_003239973.1| flagellar hook-basal body complex subunit FliE [Ammonifex degensii
KC4]
gi|260866017|gb|ACX53123.1| flagellar hook-basal body complex subunit FliE [Ammonifex degensii
KC4]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLS 89
E SFS L +A+ L GK + + +A L L+
Sbjct: 16 PESRSPKGSSFSDYLNQFLDRLERARAEADTALRDFLTGKAELHTVMIAAQEARLWLELA 75
Query: 90 IALRDKILSAVSEVSKMQI 108
+ LR+K++ A E+S+MQI
Sbjct: 76 VQLRNKLVEAYQEISRMQI 94
>gi|170743257|ref|YP_001771912.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
gi|168197531|gb|ACA19478.1| flagellar hook-basal body complex protein FliE [Methylobacterium
sp. 4-46]
Length = 101
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
F L+ G ++ E+ +A GK ++ + V + ++E L +A+RD+++S
Sbjct: 32 GFGQLVASAIDGVEAAGKRGEHQMMAVGAGKANVVDVVTAVAESETALQTLVAVRDRVIS 91
Query: 99 AVSEVSKMQI 108
A ++ +MQI
Sbjct: 92 AYEDIMRMQI 101
>gi|222100199|ref|YP_002534767.1| Flagellar hook-basal body complex protein fliE [Thermotoga
neapolitana DSM 4359]
gi|221572589|gb|ACM23401.1| Flagellar hook-basal body complex protein fliE [Thermotoga
neapolitana DSM 4359]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
+ + +G D + + GG FS L++ + ++AE ++ QGK S
Sbjct: 1 MVDRIEGLGPIEDTGKVQKKSGG----DFSKALKEALEKVNDIQKRAEKMTDDFAQGKIS 56
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A L L++ +R++I+ A E+ +MQI
Sbjct: 57 NIHEVIIEAEKASIALRLTVEVRNRIVEAYREIMRMQI 94
>gi|150021012|ref|YP_001306366.1| flagellar hook-basal body complex subunit FliE [Thermosipho
melanesiensis BI429]
gi|149793533|gb|ABR30981.1| flagellar hook-basal body complex subunit FliE [Thermosipho
melanesiensis BI429]
Length = 95
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
+ + +G ++ S FS +L D K +KAE ++ GK S
Sbjct: 1 MVDKINGVG---NYGNLKPNTLKKSNADFSKILNDAIKEVNQQQKKAEQMANDFATGKIS 57
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ E + +A +L L++ +R+KI+ A E+ +MQ
Sbjct: 58 NIHEVIVEAEKASISLRLTVEVRNKIVDAYKEIMRMQ 94
>gi|153939516|ref|YP_001391963.1| flagellar hook-basal body protein FliE [Clostridium botulinum F
str. Langeland]
gi|152935412|gb|ABS40910.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum F str. Langeland]
Length = 104
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + +SFS +L+D G KA+N + A ++G + + + + +A
Sbjct: 19 NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|187778747|ref|ZP_02995220.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
15579]
gi|187772372|gb|EDU36174.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
15579]
Length = 104
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
+F + + + +SFS +L+D G KA+N + + ++G+ + + + +A
Sbjct: 19 NFVNGNEKTENTEKVSFSEVLKDKLDGVNAKQVKADNSTQSFIKGEEIDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|217077498|ref|YP_002335216.1| flagellar hook-basal body complex protein (FliE) [Thermosipho
africanus TCF52B]
gi|217037353|gb|ACJ75875.1| flagellar hook-basal body complex protein (FliE) [Thermosipho
africanus TCF52B]
Length = 95
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI++I G + + F+ +L D K +KAE +
Sbjct: 1 MIDKINGVGN-------------YGNLKPSSVKKQNTDFTKILNDALKSVNDQQKKAEQM 47
Query: 62 SLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ GK S + E + +A +L L++ +R+KI+ A E+ +MQ
Sbjct: 48 ADDFATGKISNIHEVIVEAEKASVSLRLTVEVRNKIVDAYKEIMRMQ 94
>gi|159045789|ref|YP_001534583.1| flagellar hook-basal body protein FliE [Dinoroseobacter shibae DFL
12]
gi|157913549|gb|ABV94982.1| flagellar hook-basal body complex protein FliE [Dinoroseobacter
shibae DFL 12]
Length = 92
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 44 LQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
+ A+ ++ E V+ AA+ G V+ + Q E + ++ +R+K++ A E+
Sbjct: 28 IAGAARSFAETLQNGEAVTQAAMTGGADPHALVEALAQTELAVETAVTVRNKVVEAYQEI 87
Query: 104 SKMQI 108
+M +
Sbjct: 88 LRMPV 92
>gi|254474738|ref|ZP_05088124.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
sp. R11]
gi|214028981|gb|EEB69816.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
sp. R11]
Length = 98
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
+S T T+ E +SP + ++ + ++++E S+ A+ G
Sbjct: 6 LSATSGYAAARPATKIDPEHTATSPTA---RIKASFEEFNNTLQQSEQTSVTAMTGNGDP 62
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 63 HALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98
>gi|148261123|ref|YP_001235250.1| flagellar hook-basal body complex protein FliE [Acidiphilium
cryptum JF-5]
gi|326404524|ref|YP_004284606.1| flagellar hook-basal body complex protein FliE [Acidiphilium
multivorum AIU301]
gi|146402804|gb|ABQ31331.1| flagellar hook-basal body complex protein FliE [Acidiphilium
cryptum JF-5]
gi|325051386|dbj|BAJ81724.1| flagellar hook-basal body complex protein FliE [Acidiphilium
multivorum AIU301]
Length = 100
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF + ++ AI E + + L GK + V + QA+ L ++A+RD+++
Sbjct: 31 SFGDYMSNVITSAIHQSASTEQAASSGLMGKGDLTHVVASVAQAQVALQTTVAIRDRLIQ 90
Query: 99 AVSEVSKMQI 108
A + M I
Sbjct: 91 AYQSIMSMPI 100
>gi|218778521|ref|YP_002429839.1| flagellar hook-basal body complex subunit FliE [Desulfatibacillum
alkenivorans AK-01]
gi|218759905|gb|ACL02371.1| Flagellar hook-basal body complex subunit FliE [Desulfatibacillum
alkenivorans AK-01]
Length = 96
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
+G + Q + SF ++L+ M KA++ + L GKT + EA
Sbjct: 4 VTGVGGQSVIAQEVKKAAAGEDGSFGSVLKKMVDSVNESQIKADDTVVQNLDGKTGIHEA 63
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ + +A+ + + +R+K L A E+ +M
Sbjct: 64 MIALQEADINIRFLLQVRNKALDAYREIMRMP 95
>gi|323703168|ref|ZP_08114821.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
nigrificans DSM 574]
gi|323531827|gb|EGB21713.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
nigrificans DSM 574]
Length = 96
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
+ M + +++ F+ LL + KA+ V L G + +
Sbjct: 5 PVAMPMQIPETNSKAQTDGGTGFAELLNNAINKLNDSQLKADEVMQKFLVGDVQDIHQVT 64
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A+ T+ L++ +R+KI+ A E+S+MQ+
Sbjct: 65 IAMQEAKLTMQLAVEVRNKIVEAYQEISRMQL 96
>gi|134300248|ref|YP_001113744.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
reducens MI-1]
gi|134052948|gb|ABO50919.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
reducens MI-1]
Length = 96
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
+ ++ ++ + P F +L +A++V L G+ + +
Sbjct: 5 PVATPLQVSETTSANKYAGPADFGGVLNKAISKLNDTQIQADDVMQKFLVGEVQDIHQVT 64
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A+ T+ L++ +R+KI+ A E+S++Q+
Sbjct: 65 VAMQEAKLTMQLAVEVRNKIVEAYQEISRIQL 96
>gi|114570486|ref|YP_757166.1| flagellar hook-basal body protein FliE [Maricaulis maris MCS10]
gi|114340948|gb|ABI66228.1| flagellar hook-basal body complex subunit FliE [Maricaulis maris
MCS10]
Length = 106
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 40/89 (44%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
+ + + S + F +LL + + +E ++ A G+ + + V +
Sbjct: 18 AQQSSLGSSQDSAAASGGLDFGSLLGNAIADTSQTLAHSERMTAAGAAGEAELIDVVTAV 77
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
AE +L +A+RD+++ A E+ +M I
Sbjct: 78 SAAEISLETVVAVRDEVVKAYQEILRMPI 106
>gi|226950076|ref|YP_002805167.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A2 str. Kyoto]
gi|226844224|gb|ACO86890.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum A2 str. Kyoto]
Length = 104
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + + FS +L+D G KA+N + A ++G + + + + +A
Sbjct: 19 NFINKNEKTENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|167645333|ref|YP_001682996.1| flagellar hook-basal body protein FliE [Caulobacter sp. K31]
gi|167347763|gb|ABZ70498.1| flagellar hook-basal body complex subunit FliE [Caulobacter sp.
K31]
Length = 102
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKI 96
+ F A+L+ + AE GK + + V I AE +L+ +A+RD++
Sbjct: 31 GMDFGAMLKSAMTDTLHQTRAAETKMAQQASGKAELIDVVTAISSAEASLDTVMAVRDQV 90
Query: 97 LSAVSEVSKMQI 108
+SA E+ +M I
Sbjct: 91 ISAYQEIMRMPI 102
>gi|170756175|ref|YP_001782280.1| flagellar hook-basal body protein FliE [Clostridium botulinum B1
str. Okra]
gi|169121387|gb|ACA45223.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum B1 str. Okra]
Length = 104
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
+F + + + + FS +L+D G KA+N + A ++G + + + + +A
Sbjct: 19 NFINKNEKAENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ L++ +R+K++ A E+S+MQ+
Sbjct: 79 KMSMELAVQVRNKLVEAYQELSRMQL 104
>gi|162147441|ref|YP_001601902.1| flagellar hook-basal body complex protein fliE [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545551|ref|YP_002277780.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786018|emb|CAP55600.1| putative flagellar hook-basal body complex protein fliE
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533228|gb|ACI53165.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
diazotrophicus PAl 5]
Length = 113
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
+ N++ T+ D + FS L KGAI + AE +
Sbjct: 9 SLDAVNAYGLTQKTMQASADTQDADPNAQSSDVVTGFSDALNSAIKGAIKTGKTAEAQTA 68
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L GK ++ + + +A+ TL A+RD+++ A V +M I
Sbjct: 69 VGLSGKGNLTDIATSVEEAKLTLQTVTAVRDRVVQAYQNVMQMTI 113
>gi|258514002|ref|YP_003190224.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
acetoxidans DSM 771]
gi|257777707|gb|ACV61601.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
acetoxidans DSM 771]
Length = 99
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERT 85
Q ++ GSS FS L + A+N+S L G+ + + + +A+ +
Sbjct: 17 QQESQNDGSSKSDFSTFLAEAVNKLNSSQVDADNLSEKFLTGEVDNLHQVTIAMEKAKLS 76
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ L++ +R+K + A E+S+MQI
Sbjct: 77 MQLAMQVRNKFVEAYQEISRMQI 99
>gi|146341893|ref|YP_001206941.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. ORS278]
gi|146194699|emb|CAL78724.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
ORS278]
Length = 118
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
SFSALL+D + K+++ ++A GK ++ + V + + + ++ +++
Sbjct: 43 ADKGGPSFSALLKDAIGSVVETGRKSDSQAVAMASGKANVMDVVTAVAETDVAVSTLVSV 102
Query: 93 RDKILSAVSEVSKMQI 108
RD+++ A +V KM I
Sbjct: 103 RDRVIQAYEDVMKMTI 118
>gi|260429314|ref|ZP_05783291.1| flagellar hook-basal body protein FliE [Citreicella sp. SE45]
gi|260419937|gb|EEX13190.1| flagellar hook-basal body protein FliE [Citreicella sp. SE45]
Length = 96
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 33/84 (39%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
Q E + A+ + +AE + ++ G V + Q+E
Sbjct: 13 AAQRPATEPQPGTGGIQEKFVEAAQDFAATLAEAETTAQQSMTGDADPHALVQALAQSEL 72
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +A+R+K++ A E+ +M +
Sbjct: 73 AVETVVAVRNKVVEAYQEILRMPV 96
>gi|149203128|ref|ZP_01880099.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. TM1035]
gi|149143674|gb|EDM31710.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. TM1035]
Length = 96
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 45 QDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVS 104
Q +AK + + + E ++ A++ GK V + Q E + ++ +RD+++ A E+
Sbjct: 33 QTVAKDFVATLSEGETLAKASMIGKADPHSLVQALAQTELAVEAAVTVRDRVVEAYQEIL 92
Query: 105 KMQI 108
+M +
Sbjct: 93 RMPV 96
>gi|325295412|ref|YP_004281926.1| Flagellar hook-basal body complex protein fliE [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065860|gb|ADY73867.1| Flagellar hook-basal body complex protein fliE [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 95
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVD 77
+ + E+ F LL++ K D++++ + G ++ E +
Sbjct: 5 LNPLTKSILDIKEKHNQKANGFKDLLENFIKDVNSDLKESRKAEENLISGNVQNIEEIMY 64
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
I +A+ +L L + +R+K L + E+ +MQ+
Sbjct: 65 KIEKADLSLRLLVEIRNKALESYQEIMRMQV 95
>gi|163733140|ref|ZP_02140584.1| flagellar hook-basal body complex protein, putative [Roseobacter
litoralis Och 149]
gi|161393675|gb|EDQ18000.1| flagellar hook-basal body complex protein, putative [Roseobacter
litoralis Och 149]
Length = 108
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 45/108 (41%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M ++ + +F + T + E S S + +AK + ++E
Sbjct: 1 MDMKAVSAIQNFTNARATSAIESYQQARPATEPFPEESSASETMGRVAKDFAATLAESEE 60
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +++ G V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 61 IAKSSMVGDADPHALVQALAQTELAVEAAVRVRNKVVEAYQEILRMPV 108
>gi|110677660|ref|YP_680667.1| flagellar hook-basal body protein FliE [Roseobacter denitrificans
OCh 114]
gi|109453776|gb|ABG29981.1| flagellar hook-basal body complex protein, putative [Roseobacter
denitrificans OCh 114]
Length = 108
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 44/108 (40%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M ++ + +F + + E S S L +AK + ++E
Sbjct: 1 MDMKAVSAIQNFTNARAASAIESYQQARPATEPLPEESSASETLGRVAKDFASTLAESEE 60
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +++ G V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 61 IAKSSMVGDADPHALVQALAQTELAVEAAVRVRNKVVEAYQEILRMPV 108
>gi|78044773|ref|YP_359839.1| flagellar hook-basal body complex protein FliE [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996888|gb|ABB15787.1| flagellar hook-basal body complex protein FliE [Carboxydothermus
hydrogenoformans Z-2901]
Length = 95
Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALR 93
+ + F L + KAE + L GK + + + +A+ +L L++ +R
Sbjct: 21 TKTLDFEKKLAEALDKVNEKQLKAEQATQDFLAGKVDDIHQVLILAQEAKLSLELAVEVR 80
Query: 94 DKILSAVSEVSKMQI 108
+KI+ A E+S+MQI
Sbjct: 81 NKIVEAYQEISRMQI 95
>gi|255261247|ref|ZP_05340589.1| flagellar hook-basal body protein FliE [Thalassiobium sp. R2A62]
gi|255103582|gb|EET46256.1| flagellar hook-basal body protein FliE [Thalassiobium sp. R2A62]
Length = 95
Score = 50.5 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 34/87 (39%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
++ N + S +A ++ +E ++ A+ V + Q
Sbjct: 9 AKNYAATRNATSPAENSGASDAFVKVASDFAETLQNSEQTAMNAMTSGADPHALVQALAQ 68
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
E + ++ +R+K++ A E+ +M +
Sbjct: 69 TELAIETAVTVRNKVVEAYQEILRMPV 95
>gi|169831912|ref|YP_001717894.1| flagellar hook-basal body complex subunit FliE [Candidatus
Desulforudis audaxviator MP104C]
gi|169638756|gb|ACA60262.1| flagellar hook-basal body complex subunit FliE [Candidatus
Desulforudis audaxviator MP104C]
Length = 102
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
+ D + S + + F +L + +A+ L G+ + + +
Sbjct: 13 ALGTDGCRRSGGQAAHTGGDFGRILNEAVNRLNESQVRADTAVRQFLAGEVQDVHQVIIA 72
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +AE T+ L++ +R++IL A E+S+ +
Sbjct: 73 LREAELTMQLAVEVRNRILEAYQELSRTPL 102
>gi|15895432|ref|NP_348781.1| flagellar hook-basal body protein FliE [Clostridium acetobutylicum
ATCC 824]
gi|38503143|sp|Q97H50|FLIE_CLOAB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|15025156|gb|AAK80121.1|AE007716_10 Flagellar hook-basal body protein FliE [Clostridium acetobutylicum
ATCC 824]
gi|325509578|gb|ADZ21214.1| flagellar hook-basal body protein FliE [Clostridium acetobutylicum
EA 2018]
Length = 111
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 7 QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
S ++ + + Q S + G++ + F +L + + A+N + A +
Sbjct: 9 DSMKSILTKNTSNTNVINENQTSGDANGTNSVDFGNILNEKLQEVNDKQIDADNTTNAFI 68
Query: 67 QGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
QG + + + +A+ +L L++ +R+K++ A E+++ Q+
Sbjct: 69 QGDDVDVHKVMLSTEEAKLSLELAVQMRNKLVDAYQELNRTQL 111
>gi|289523575|ref|ZP_06440429.1| flagellar hook-basal body complex protein FliE [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503267|gb|EFD24431.1| flagellar hook-basal body complex protein FliE [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 89
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHI 79
M+ + Q E ++ SF L+ + +AE + G + + V +
Sbjct: 1 MKLNSGQFIPETKKTNKESFEDHLKKGFENVNNLQLRAEREVQKLVTGDVDDISQVVTAV 60
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+AE L L + +RDK++ A ++S++ +
Sbjct: 61 AEAEIALRLFVEVRDKLVDAYQQLSRIPV 89
>gi|148256778|ref|YP_001241363.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. BTAi1]
gi|146408951|gb|ABQ37457.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
BTAi1]
Length = 118
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 41/76 (53%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
SFSA+L+D + K+++ ++A GK ++ + V + + + ++ +++
Sbjct: 43 ADKGGPSFSAVLKDAIGSVMETGRKSDSQAVAMAAGKANVMDVVTAVAETDVAVSTLVSV 102
Query: 93 RDKILSAVSEVSKMQI 108
RD+++ A +V KM I
Sbjct: 103 RDRVIQAYEDVMKMTI 118
>gi|39936947|ref|NP_949223.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
CGA009]
gi|192292775|ref|YP_001993380.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
TIE-1]
gi|39650804|emb|CAE29327.1| Flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris CGA009]
gi|192286524|gb|ACF02905.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris TIE-1]
Length = 101
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 42/78 (53%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
++GG SF L++ + K++ S+A GK+++ + V + + + ++ +
Sbjct: 24 DKGGEDAPSFGNLVKQAMGSVLDAGRKSDAQSMAMASGKSNVMDVVTAVAETDVAVSTLV 83
Query: 91 ALRDKILSAVSEVSKMQI 108
++RD+++ + E+ +M I
Sbjct: 84 SVRDRVIQSYEEIMRMPI 101
>gi|260574404|ref|ZP_05842408.1| flagellar hook-basal body complex protein FliE [Rhodobacter sp.
SW2]
gi|259023300|gb|EEW26592.1| flagellar hook-basal body complex protein FliE [Rhodobacter sp.
SW2]
Length = 96
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+ + G + F+ L D A+ + + E + AA+ G V +
Sbjct: 14 QARSAAAPQPQSGGAGAGFAKLAGDFAQ----TLAQGEQTARAAMTGGADPHALVQALAA 69
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
+E + ++ +RDK++ A E+ +M +
Sbjct: 70 SELAVETAVTVRDKVVEAYQEILRMPV 96
>gi|302384098|ref|YP_003819921.1| flagellar hook-basal body complex protein FliE [Brevundimonas
subvibrioides ATCC 15264]
gi|302194726|gb|ADL02298.1| flagellar hook-basal body complex protein FliE [Brevundimonas
subvibrioides ATCC 15264]
Length = 99
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
FS +LQ + AE A+QG+ SM + V + AE +L IA+RD+++
Sbjct: 30 DFSQMLQGVMGNMTQQTRAAETQMTQAVQGQGSMIDMVTAVSSAEASLETVIAVRDQVIQ 89
Query: 99 AVSEVSKMQI 108
A E+ +M +
Sbjct: 90 AYQEIMRMPV 99
>gi|75675327|ref|YP_317748.1| flagellar hook-basal body protein FliE [Nitrobacter winogradskyi
Nb-255]
gi|74420197|gb|ABA04396.1| Flagellar hook-basal body complex protein FliE [Nitrobacter
winogradskyi Nb-255]
Length = 103
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 45/91 (49%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
++ D + + G SF A+L+D+ G + ++ ++A GK ++ + V
Sbjct: 13 SLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAMASGKANLMDVVT 72
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + ++ +++RD+++ + ++ +M I
Sbjct: 73 AVADTDVAVSTLVSVRDRVIQSYEDIMRMPI 103
>gi|163738063|ref|ZP_02145479.1| flagellar hook-basal body complex protein FliE, putative
[Phaeobacter gallaeciensis BS107]
gi|163742541|ref|ZP_02149927.1| flagellar hook-basal body complex protein FliE, putative
[Phaeobacter gallaeciensis 2.10]
gi|161384126|gb|EDQ08509.1| flagellar hook-basal body complex protein FliE, putative
[Phaeobacter gallaeciensis 2.10]
gi|161388679|gb|EDQ13032.1| flagellar hook-basal body complex protein FliE, putative
[Phaeobacter gallaeciensis BS107]
Length = 98
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 49 KGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G ++++E VS+ A+ G V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 39 EEFAGTLQQSEQVSVTAMTGNGDPHALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98
>gi|126463749|ref|YP_001044863.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
ATCC 17029]
gi|332559805|ref|ZP_08414127.1| FliE2 [Rhodobacter sphaeroides WS8N]
gi|126105413|gb|ABN78091.1| putative flagellar hook-basal body complex protein [Rhodobacter
sphaeroides ATCC 17029]
gi|332277517|gb|EGJ22832.1| FliE2 [Rhodobacter sphaeroides WS8N]
Length = 96
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 39/91 (42%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
+I + + + +A + A+ + + E + AA+ GK V+
Sbjct: 6 SIAAQSYAKARTAAAPDQPSVGLTAAFERAAESFTQTLAQGEETARAAMTGKADPHALVE 65
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ + ++ LRDK++ A E+ +M +
Sbjct: 66 ALAASQMAVETAVTLRDKVVEAYQEILRMPV 96
>gi|56695103|ref|YP_165450.1| flagellar hook-basal body protein FliE [Ruegeria pomeroyi DSS-3]
gi|56676840|gb|AAV93506.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
pomeroyi DSS-3]
Length = 96
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 39/89 (43%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
+ + + S + L+ + ++ +E ++ +A+ GK V +
Sbjct: 8 AAQAYASARPATQADPKDDSATQGLRGTFQDFAATLQHSEELAQSAMIGKADPHALVQAL 67
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q+E + ++ +R+K++ A E+ +M +
Sbjct: 68 AQSELAVETAVTVRNKVVEAYQEILRMPV 96
>gi|146278636|ref|YP_001168795.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
ATCC 17025]
gi|145556877|gb|ABP71490.1| hypothetical protein Rsph17025_2602 [Rhodobacter sphaeroides ATCC
17025]
Length = 96
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 40/96 (41%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
+ + ++ + + I +A L A+ + E + AA+ GK
Sbjct: 1 MDISTSVAAQTYARARLATAPEAPSIGVAAALNRAAESFTETLAHGEETARAAMTGKADP 60
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V+ + ++ + ++ LRDK++ A E+ +M +
Sbjct: 61 HALVEALAASQTAVETAVTLRDKVVEAYQEILRMPV 96
>gi|254420038|ref|ZP_05033762.1| flagellar hook-basal body complex protein (FliE) [Brevundimonas sp.
BAL3]
gi|196186215|gb|EDX81191.1| flagellar hook-basal body complex protein (FliE) [Brevundimonas sp.
BAL3]
Length = 100
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
++ + + S F+ L+++ AE ++QG ++ + V
Sbjct: 11 AAVQGSAMPTAAQPPASGDNGFADLVKNAMTDMTQQSRAAETQMTQSIQGNGNLIDVVTA 70
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ AE +L +++RD+++SA E+ M I
Sbjct: 71 LSSAEASLETVMSVRDQVISAYKEIMAMPI 100
>gi|118443323|ref|YP_877974.1| flagellar hook-basal body protein FliE [Clostridium novyi NT]
gi|118133779|gb|ABK60823.1| flagellar hook-basal body complex protein (FliE) [Clostridium novyi
NT]
Length = 103
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N FI + + + F +L+ ++E V+ ++G
Sbjct: 3 INEFIPSSGIYSKIDSLNKEKATSSVNKSSEFQDVLKSQLDKVNEKQLESEQVTNDFIKG 62
Query: 69 K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + +A+ ++ L++ +R+K+L A E+++MQ+
Sbjct: 63 EDVEVHDVMIKNEEAKLSMQLAVQVRNKLLEAYQEINRMQV 103
>gi|115523572|ref|YP_780483.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisA53]
gi|115517519|gb|ABJ05503.1| flagellar hook-basal body complex subunit FliE [Rhodopseudomonas
palustris BisA53]
Length = 109
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 43/91 (47%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
G + + + SF LL+ + KA+ ++A GK+++ + V
Sbjct: 19 GSGTGAAGGVAAVKPLDADGQSFGDLLKTATGSVVDAGRKADAQTMAMASGKSNVMDVVT 78
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + ++ +++RD+++ + E+ +MQI
Sbjct: 79 AVAETDVAVSTLVSVRDRVIQSYEEIMRMQI 109
>gi|86750884|ref|YP_487380.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
HaA2]
gi|86573912|gb|ABD08469.1| flagellar hook-basal body complex protein FliE subunit
[Rhodopseudomonas palustris HaA2]
Length = 101
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPI----SFSALLQDMAKGAIGDMEKAENVSLAALQ 67
S + +N G P SF AL++D + K++ ++A
Sbjct: 1 MASPISAANAYASLARLANPGGAGKPTDNGPSFGALVKDAMGSVLDAGRKSDAQTVAMAN 60
Query: 68 GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GK+++ + V + + + ++ +++RD+++ + E+ +MQI
Sbjct: 61 GKSNVMDVVTAVAETDVAVSTLVSVRDRVIQSYEEILRMQI 101
>gi|254466886|ref|ZP_05080297.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
bacterium Y4I]
gi|206687794|gb|EDZ48276.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
bacterium Y4I]
Length = 98
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 36/96 (37%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
I + + A L+ + ++ +E VS+ A+ +
Sbjct: 3 IRSLSAASGYAAARPATKADPNHESTGAGAQLKQSFEDFTATLQNSEQVSVQAMTSQADP 62
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 63 HALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98
>gi|114762161|ref|ZP_01441629.1| flagellar hook-basal body complex protein FliE, putative
[Pelagibaca bermudensis HTCC2601]
gi|114545185|gb|EAU48188.1| flagellar hook-basal body complex protein FliE, putative
[Roseovarius sp. HTCC2601]
Length = 96
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
Q E + S +A L+ A+ + +AE + AA+ G V + Q+E
Sbjct: 13 AAQRPATEPQPNADSAAARLRGAAEDFATTLNEAETTATAAMTGDADPHALVQALAQSEL 72
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +ALR+K++ A E+ +M +
Sbjct: 73 AVETVVALRNKVVEAYQEILRMPV 96
>gi|77464907|ref|YP_354411.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
2.4.1]
gi|77389325|gb|ABA80510.1| putative flagellar hook-basal body complex protein [Rhodobacter
sphaeroides 2.4.1]
Length = 96
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
T T Y + + + +A + A+ + + E + AA+ GK
Sbjct: 4 RTSTAAQSYAKARTAAAP-DQPSVGLTAAFERAAESFTQTLAQGEETARAAMTGKADPHA 62
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V+ + ++ + ++ LRDK++ A E+ +M +
Sbjct: 63 LVEALAASQMAVETAVTLRDKVVEAYQEILRMPV 96
>gi|219670160|ref|YP_002460595.1| flagellar hook-basal body complex subunit FliE [Desulfitobacterium
hafniense DCB-2]
gi|254789306|sp|B8FTR7|FLIE_DESHD RecName: Full=Flagellar hook-basal body complex protein FliE
gi|219540420|gb|ACL22159.1| flagellar hook-basal body complex subunit FliE [Desulfitobacterium
hafniense DCB-2]
Length = 114
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
+ F LQ+ + ++A+ SL G+ + AV +
Sbjct: 26 PVEGSGPQTPAGAAKVGADFGQFLQEALQKVDNLQKEADVASLGLATGQIQDLHTAVIAM 85
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A +L+L++ +R++ L A E+ +MQI
Sbjct: 86 EKAGLSLSLTVDVRNRALDAYHEIMRMQI 114
>gi|209884537|ref|YP_002288394.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
carboxidovorans OM5]
gi|209872733|gb|ACI92529.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
carboxidovorans OM5]
Length = 108
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
S+ SF+ALL++ G + K++ ++A GK ++ + V + + + ++ +++RD
Sbjct: 35 STGPSFNALLKEAMNGVLETGHKSDAQAVAMASGKANVMDVVTAVAETDVAVSTLVSVRD 94
Query: 95 KILSAVSEVSKMQI 108
K++ A ++ +M I
Sbjct: 95 KVIQAYEDIMRMPI 108
>gi|148270546|ref|YP_001245006.1| flagellar hook-basal body complex subunit FliE [Thermotoga
petrophila RKU-1]
gi|170289252|ref|YP_001739490.1| flagellar hook-basal body complex subunit FliE [Thermotoga sp. RQ2]
gi|281412854|ref|YP_003346933.1| flagellar hook-basal body complex subunit FliE [Thermotoga
naphthophila RKU-10]
gi|147736090|gb|ABQ47430.1| flagellar hook-basal body complex subunit FliE [Thermotoga
petrophila RKU-1]
gi|170176755|gb|ACB09807.1| flagellar hook-basal body complex subunit FliE [Thermotoga sp. RQ2]
gi|281373957|gb|ADA67519.1| flagellar hook-basal body complex subunit FliE [Thermotoga
naphthophila RKU-10]
Length = 94
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
+ + +G + + + +FS L++ + +KAE + QG+ S
Sbjct: 1 MVDRIEGLGPLSQSGKTQKK----NENNFSEALKEALEKVNDIQKKAEKAADDFAQGRIS 56
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A L L++ +R++I+ A ++ +MQI
Sbjct: 57 NIHEVIIEAEKASIALRLTVEVRNRIVEAYRDIMRMQI 94
>gi|149182502|ref|ZP_01860975.1| flagellar hook-basal body protein [Bacillus sp. SG-1]
gi|148849762|gb|EDL63939.1| flagellar hook-basal body protein [Bacillus sp. SG-1]
Length = 101
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALR 93
+ +F+ L+ + ++++ ++ ++G+ + + + +A TL ++ +R
Sbjct: 27 QNQQNFADFLKKSIEEVSASQKESDMMTEKLVRGENVDLHQVMIASQKASITLQTTMEVR 86
Query: 94 DKILSAVSEVSKMQI 108
+K++ A EV +M +
Sbjct: 87 NKVIEAYQEVMRMPM 101
>gi|299131774|ref|ZP_07024969.1| flagellar hook-basal body complex protein FliE [Afipia sp. 1NLS2]
gi|298591911|gb|EFI52111.1| flagellar hook-basal body complex protein FliE [Afipia sp. 1NLS2]
Length = 107
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 49/101 (48%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
N++ S + + G S SFS+L+++ G + K++ ++A
Sbjct: 7 AANAYASLSRIMDSATSSGGAGKIAGTSGGPSFSSLVKEAMNGVLDAGRKSDAQTVAMAS 66
Query: 68 GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GK ++ + V + + + ++ +++RDK++ + ++ KM I
Sbjct: 67 GKANVMDVVTAVAETDVAVSTLVSVRDKVIQSYEDIMKMPI 107
>gi|307945653|ref|ZP_07660989.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
TrichSKD4]
gi|307771526|gb|EFO30751.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
TrichSKD4]
Length = 110
Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ F ++Q+ + A+ ++ ++GKT + + V I +AE L + +++ D+++
Sbjct: 40 VDFGQMVQEAVSNIVQQGRDADQKAMGLVEGKTDVVDVVTAIAEAEVALEMMVSVCDRVI 99
Query: 98 SAVSEVSKMQI 108
SA E+ +M I
Sbjct: 100 SAYEEIKRMPI 110
>gi|331269313|ref|YP_004395805.1| flagellar hook-basal body complex protein (FliE) [Clostridium
botulinum BKT015925]
gi|329125863|gb|AEB75808.1| flagellar hook-basal body complex protein (FliE) [Clostridium
botulinum BKT015925]
Length = 101
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N FI + +E + I F L+ +++ ++ ++G
Sbjct: 3 INEFIPSKGIYSQVNSIHKEEKKE--DNNIGFGETLKKQLNEVNEKQLESQKIAEDFIKG 60
Query: 69 K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + +A+ +L L++ +R+K++ A E+++MQ+
Sbjct: 61 EDVEVHDVMIKNEEAKLSLQLAVQVRNKLMEAYQEINRMQV 101
>gi|125972985|ref|YP_001036895.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum ATCC 27405]
gi|256004782|ref|ZP_05429757.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum DSM 2360]
gi|125713210|gb|ABN51702.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum ATCC 27405]
gi|255991232|gb|EEU01339.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum DSM 2360]
gi|316940779|gb|ADU74813.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum DSM 1313]
Length = 104
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+ G N I T ++ E + SFS L++ K ++++ V+
Sbjct: 2 AVNGINLVTPSVSGIDFTVGNTISNKNE--NVVQSFSDYLKNAIKQVDELEKQSKAVAED 59
Query: 65 ALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GKT + E + +A+ + ++ +R+KIL A +E+ +MQI
Sbjct: 60 FAAGKTDNIHEVMIAAQKADIAIQFTLQIRNKILDAYNEIMRMQI 104
>gi|253681755|ref|ZP_04862552.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum D str. 1873]
gi|253561467|gb|EES90919.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum D str. 1873]
Length = 101
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N FI ++S +E + I F L+ +++ V+ ++G
Sbjct: 3 INEFIPSEGIYSQVNSIHKDSKKE--DNNIGFGETLKKQLNEVNEKQLESQKVTEDFIKG 60
Query: 69 K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + +A+ +L L++ +R+K++ A E+++MQ+
Sbjct: 61 EDVEVHDVMIKNEEAKLSLQLAVQVRNKLMEAYQEINRMQV 101
>gi|89895736|ref|YP_519223.1| hypothetical protein DSY2990 [Desulfitobacterium hafniense Y51]
gi|122482005|sp|Q24T63|FLIE_DESHY RecName: Full=Flagellar hook-basal body complex protein FliE
gi|89335184|dbj|BAE84779.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 114
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
+ F LQ+ + ++A+ SL G+ + AV + +A +L
Sbjct: 33 QTPAGAAKVGADFGQFLQEALQKVDNLQKEADVASLGLATGQIQDLHTAVIAMEKAGLSL 92
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+L++ +R++ L A E+ +MQI
Sbjct: 93 SLTVDVRNRALDAYHEIMRMQI 114
>gi|221640828|ref|YP_002527090.1| flagellar hook-basal body complex protein [Rhodobacter sphaeroides
KD131]
gi|221161609|gb|ACM02589.1| flagellar hook-basal body complex protein [Rhodobacter sphaeroides
KD131]
Length = 71
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 35/71 (49%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
+ +A + A+ + + E + AA+ GK V+ + ++ + ++ LRDK++
Sbjct: 1 MGLTAAFERAAESFTQTLAQGEETARAAMTGKADPHALVEALAASQMAVETAVTLRDKVV 60
Query: 98 SAVSEVSKMQI 108
A E+ +M +
Sbjct: 61 EAYQEILRMPV 71
>gi|15644118|ref|NP_229167.1| flagellar hook-basal body complex protein FliE [Thermotoga maritima
MSB8]
gi|38503260|sp|Q9X186|FLIE_THEMA RecName: Full=Flagellar hook-basal body complex protein FliE
gi|4981926|gb|AAD36436.1|AE001790_8 flagellar hook-basal body complex protein FliE [Thermotoga maritima
MSB8]
Length = 94
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
+ + +G + + S +FS L++ + +KAE + QG+ S
Sbjct: 1 MVDRIEGLGPLSQSGKTQKK----SENNFSEALKEALEKVNDIQKKAEKAADDFAQGRIS 56
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A L L++ +R++I+ A ++ +MQI
Sbjct: 57 NIHEVIIEAEKASIALRLTVEVRNRIVEAYRDIMRMQI 94
>gi|281417196|ref|ZP_06248216.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum JW20]
gi|281408598|gb|EFB38856.1| flagellar hook-basal body complex subunit FliE [Clostridium
thermocellum JW20]
Length = 104
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+ G N I T ++ E + SFS L++ K +++ V+
Sbjct: 2 AVNGINLVTPSVSGIDFTVGNTISNKNE--NVVQSFSDYLKNAIKQVDELEKQSRAVAED 59
Query: 65 ALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GKT + E + +A+ + ++ +R+KIL A +E+ +MQI
Sbjct: 60 FAAGKTDNIHEVMIAAQKADIAIQFTLQIRNKILDAYNEIMRMQI 104
>gi|308273185|emb|CBX29788.1| hypothetical protein N47_F14830 [uncultured Desulfobacterium sp.]
Length = 96
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 38/80 (47%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLN 87
S ++ F ++++ ++ + + LQGK + + ++ +AE ++
Sbjct: 16 KSEGITSNNSTGFKEVIKNAIDNVNSTEKEGDKSIVNLLQGKEDVHTTMINLQKAEISMK 75
Query: 88 LSIALRDKILSAVSEVSKMQ 107
+ +++R+K L A E+ MQ
Sbjct: 76 MLLSVRNKALEAYKEIMHMQ 95
>gi|196247640|ref|ZP_03146342.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
G11MC16]
gi|196212424|gb|EDY07181.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
G11MC16]
Length = 98
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
+ +G+ T + + F+A L++ +A+ ++ ++G+
Sbjct: 1 MLDGVSGVGLTPVSTVPNPVKPAEVQKQFAAFLKEALNNVNDKQIQADALTEKLVRGENV 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A L L+I +R+K + A E+ +M +
Sbjct: 61 QLHDVMIAAQKASVALQLTIEIRNKAIEAYQEMMRMPL 98
>gi|302389657|ref|YP_003825478.1| flagellar hook-basal body complex subunit FliE
[Thermosediminibacter oceani DSM 16646]
gi|302200285|gb|ADL07855.1| flagellar hook-basal body complex subunit FliE
[Thermosediminibacter oceani DSM 16646]
Length = 94
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALR 93
+ SF+ +L + G + ++ + G+ S+ E + +A+ +L L++ +R
Sbjct: 20 QADNSFNDILAKAFETVNGYQKGYDDALKKLIAGEDISVHEVMIAAEKAKLSLELAVQVR 79
Query: 94 DKILSAVSEVSKMQI 108
+K + A E+ +MQI
Sbjct: 80 NKAIEAYQEIMRMQI 94
>gi|304321146|ref|YP_003854789.1| hypothetical protein PB2503_07959 [Parvularcula bermudensis
HTCC2503]
gi|303300048|gb|ADM09647.1| hypothetical protein PB2503_07959 [Parvularcula bermudensis
HTCC2503]
Length = 96
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
+ +G + Q + + L+ + +KA+ G+ S
Sbjct: 1 MAAELSALGAATGYGQVL-GAKPAPGGDLAENLKAAGEAFTKVFDKADQSVQQMAAGEGS 59
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V+ + +AE L ++ +RD+++ A E+ +M +
Sbjct: 60 AHAVVEAMAEAEVALQAAVTIRDRVVEAYQEILRMPV 96
>gi|83858795|ref|ZP_00952317.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
gi|83853618|gb|EAP91470.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
Length = 104
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 39/82 (47%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
+N + F ++ + + ++++E ++ A G+ + + V + AE L
Sbjct: 23 SQTNPVNEAQGGDFGDMVMNAVESVQQTLQQSETLTAQAATGQAELVDVVTAVAAAEVQL 82
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+A+RD+++ A E+ +M I
Sbjct: 83 ESVVAVRDQVIRAYQEILRMPI 104
>gi|225849148|ref|YP_002729312.1| flagellar hook-basal body complex protein FliE
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644347|gb|ACN99397.1| flagellar hook-basal body complex protein FliE
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 96
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMR 73
+ + + SF+ +L++ + D+ A+ V GK +++
Sbjct: 2 KVEGLNTLPLKIDQETQINSQEKQSFADILKNFIQDVNNDLLTAKQVGQDLAVGKVENIQ 61
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
EA+ I +A+ + L +R+K L A E+ +MQ+
Sbjct: 62 EAMYLIEKADISFKLLTEIRNKALEAYQEIMRMQV 96
>gi|254510262|ref|ZP_05122329.1| flagellar hook-basal body complex protein FliE, putative
[Rhodobacteraceae bacterium KLH11]
gi|221533973|gb|EEE36961.1| flagellar hook-basal body complex protein FliE, putative
[Rhodobacteraceae bacterium KLH11]
Length = 69
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 34/68 (50%)
Query: 41 SALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAV 100
+ ++ + ++ +E V+ +++ G+ V + Q E + ++ +R+K++ A
Sbjct: 2 AQGMRSTFQDFAATLKHSEQVAQSSMVGQADPHALVQALAQTELAVETAVIVRNKVVEAY 61
Query: 101 SEVSKMQI 108
E+ +M +
Sbjct: 62 QEILRMPV 69
>gi|27380923|ref|NP_772452.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
USDA 110]
gi|38502985|sp|Q89I27|FLIE1_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 1
gi|27354089|dbj|BAC51077.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
USDA 110]
Length = 102
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 42/74 (56%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
+S SF++LL+D + K++ ++A GK ++ + V + + ++ +++RD
Sbjct: 29 ASGQSFASLLKDAVGSVMESGRKSDAQTVAMAAGKANVMDVVTAVADTDVAVSTLVSVRD 88
Query: 95 KILSAVSEVSKMQI 108
+++SA ++ KM I
Sbjct: 89 RVISAYEDIMKMPI 102
>gi|85716544|ref|ZP_01047514.1| flagellar basal body protein [Nitrobacter sp. Nb-311A]
gi|85696545|gb|EAQ34433.1| flagellar basal body protein [Nitrobacter sp. Nb-311A]
Length = 86
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 41/70 (58%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
+FSA+L+D+ G + K++ ++A GK ++ + V + + ++ +++RD+++
Sbjct: 17 AFSAVLKDVLGGVMEAGRKSDAQTVAMASGKANLMDVVTAVADTDVAVSTLVSVRDRVIQ 76
Query: 99 AVSEVSKMQI 108
+ ++ +M I
Sbjct: 77 SYEDIMRMPI 86
>gi|150019081|ref|YP_001311335.1| flagellar hook-basal body complex subunit FliE [Clostridium
beijerinckii NCIMB 8052]
gi|149905546|gb|ABR36379.1| flagellar hook-basal body complex subunit FliE [Clostridium
beijerinckii NCIMB 8052]
Length = 105
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILS 98
F +L+ G M +A+ + ++G+ ++ E + +A +L RDK+L
Sbjct: 36 FGDVLKKAVDDTNGKMTQADETATKFIKGEDVNIDEVMIKNQEASLSLQFLAQTRDKLLE 95
Query: 99 AVSEVSKMQI 108
+++S++Q+
Sbjct: 96 GYNQLSRLQL 105
>gi|126738581|ref|ZP_01754286.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. SK209-2-6]
gi|126720380|gb|EBA17086.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. SK209-2-6]
Length = 99
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
S S T+ + G S L+ + E ++ ++
Sbjct: 3 IRSVTSAASGYTAARPATKVDPDFNGPSA---GDQLKSSFAQFANTLRATETTAVQSMTS 59
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ V + Q E + ++ +R+K++ A E+ +M +
Sbjct: 60 SSDPHALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 99
>gi|157738154|ref|YP_001490838.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
gi|315636297|ref|ZP_07891547.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
gi|157700008|gb|ABV68168.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
gi|315479386|gb|EFU70069.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
Length = 106
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD-MEKAEN 60
MI I NS + + + N E + SF LL ++ ++
Sbjct: 1 MIGTINSLNSLNPLKINLNAVQETQPDDNNE--LAGKSFQELLDGAVNDVNSTQIKGYDS 58
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A +++EAV I +AE T+ L++ +++K ++A EV +MQ+
Sbjct: 59 MKEIATGKVVNLQEAVQKIEEAELTMKLALEVKNKAINAYREVMRMQV 106
>gi|291278936|ref|YP_003495771.1| flagellar hook-basal body complex protein FliE [Deferribacter
desulfuricans SSM1]
gi|290753638|dbj|BAI80015.1| flagellar hook-basal body complex protein FliE [Deferribacter
desulfuricans SSM1]
Length = 100
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
E S + FS LL++ K +A+ L G+T + E + + +A+ +L
Sbjct: 19 KKTESKESKNVDFSELLKNAIKDVNNAQLQADEAVKKVLSGETKDIHETMIALQKADVSL 78
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L + +R+K++ A E+ + Q+
Sbjct: 79 KLMLEVRNKLIEAYQEIMRTQV 100
>gi|188997544|ref|YP_001931795.1| flagellar hook-basal body complex subunit FliE
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932611|gb|ACD67241.1| flagellar hook-basal body complex subunit FliE
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 94
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
S SFS LLQ+ K D+ A+N+ GK ++++A+ I +A+ + L +R+
Sbjct: 21 SNTSFSDLLQNFIKDVNNDLINAKNIEQDLSLGKIQNIQDAMYQIEKADISFRLLTEIRN 80
Query: 95 KILSAVSEVSKMQI 108
K L + E+ +MQ+
Sbjct: 81 KALESYQEIMRMQV 94
>gi|316932835|ref|YP_004107817.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris DX-1]
gi|315600549|gb|ADU43084.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris DX-1]
Length = 102
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 38/70 (54%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF L++ + +++ S+A GK+++ + V + + + ++ +++RD+++
Sbjct: 33 SFGNLVKQAMGSVLDAGRQSDAQSMAMASGKSNVMDVVTAVAETDVAVSTLVSVRDRVIQ 92
Query: 99 AVSEVSKMQI 108
+ E+ +M I
Sbjct: 93 SYEEIMRMPI 102
>gi|92116947|ref|YP_576676.1| flagellar hook-basal body protein FliE [Nitrobacter hamburgensis
X14]
gi|91799841|gb|ABE62216.1| flagellar hook-basal body complex protein (FliE) [Nitrobacter
hamburgensis X14]
Length = 103
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 44/91 (48%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
++ D + + SFS++L+D + K++ ++A GK ++ + V
Sbjct: 13 SLAKMMDSGTAAGKASEGGGPSFSSVLKDALGSVMEAGRKSDAQTVAMASGKANVMDVVT 72
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + ++ +++RD+++ + ++ +M I
Sbjct: 73 AVADTDVAVSTLVSVRDRVIQSYEDIMRMPI 103
>gi|153953777|ref|YP_001394542.1| flagellar hook-basal body protein FliE [Clostridium kluyveri DSM
555]
gi|219854393|ref|YP_002471515.1| hypothetical protein CKR_1050 [Clostridium kluyveri NBRC 12016]
gi|146346658|gb|EDK33194.1| FliE [Clostridium kluyveri DSM 555]
gi|219568117|dbj|BAH06101.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 102
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKIL 97
F+++L++ +A N + +QG + + + +A+ +L L++ +R+K +
Sbjct: 32 DFASVLKNELDEVNNKQIEANNSTEEFIQGDRVDIHNVMLDTEEAKMSLELAVQIRNKFV 91
Query: 98 SAVSEVSKMQI 108
A E+++ QI
Sbjct: 92 EAYQELNRTQI 102
>gi|126734104|ref|ZP_01749851.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. CCS2]
gi|126716970|gb|EBA13834.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. CCS2]
Length = 93
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
T + + GG+S A + ++ +EN ++ A+ V+ + Q
Sbjct: 12 AASKTATAPDAGGASSA-----FGTAANSFMTTLQASENTAMQAMTSGADPHALVEALAQ 66
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
E + ++ +RD+++ A E+ +M +
Sbjct: 67 TELAVQTAVTVRDRVVEAYQEILRMPV 93
>gi|85858816|ref|YP_461018.1| flagellar hook-basal body complex protein [Syntrophus
aciditrophicus SB]
gi|85721907|gb|ABC76850.1| flagellar hook-basal body complex protein [Syntrophus
aciditrophicus SB]
Length = 101
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
Q E +SFS +L++ + I ++ + +++ +Q S+ EA+ + +A
Sbjct: 19 QKVEIEPAEGKVSFSDVLRNTIQD-INKLQSDADEAISGVQVHDTGSIHEAMIALEKASI 77
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ + +R+KI+ A EV +MQ+
Sbjct: 78 SFQTMMQVRNKIIDAYQEVMRMQV 101
>gi|89056687|ref|YP_512138.1| flagellar hook-basal body protein FliE [Jannaschia sp. CCS1]
gi|88866236|gb|ABD57113.1| flagellar hook-basal body complex protein FliE putative [Jannaschia
sp. CCS1]
Length = 95
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERT 85
P F+ + A + E + AA+ V + Q E
Sbjct: 17 AAVPPTTAAQDPSLFAQAVGSFA----DTVANGEAQARAAMTTGADPHALVTALAQTELA 72
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ + +RD+++ A E+ +M +
Sbjct: 73 VETVVTIRDRVVEAYQEILRMPV 95
>gi|149912831|ref|ZP_01901365.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. AzwK-3b]
gi|149813237|gb|EDM73063.1| flagellar hook-basal body complex protein FliE, putative
[Roseobacter sp. AzwK-3b]
Length = 96
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
+ G P + + +A+ ++ + AA+ G V + Q
Sbjct: 13 AASRPATEPKAGAGGP---AEAMMGLARDFAATLQDGGATAKAAMTGGADPHALVQALAQ 69
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
E + ++ +R++++ A E+ +M +
Sbjct: 70 TELAVEAAVTVRNRVVEAYQEILRMPV 96
>gi|323341387|ref|ZP_08081631.1| flagellar hook-basal body protein [Lactobacillus ruminis ATCC
25644]
gi|323091264|gb|EFZ33892.1| flagellar hook-basal body protein [Lactobacillus ruminis ATCC
25644]
Length = 104
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
+ + ++ + + + N+ + SF ++L+ G +M + +
Sbjct: 1 MNSISGLENYQNQLSKITGLSDGQNQISKTDAKSFGSVLEKAIAGLNSNMNTLDQGTNGM 60
Query: 66 LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ G ++ + + + ++ +A+ +L ++ +R+K++ A +++ MQ
Sbjct: 61 ISGTESDLGKVMINMTEAQLSLETAVQVRNKVIEAYNDIKNMQ 103
>gi|310816828|ref|YP_003964792.1| flagellar hook-basal body protein FliE [Ketogulonicigenium vulgare
Y25]
gi|308755563|gb|ADO43492.1| flagellar hook-basal body protein FliE [Ketogulonicigenium vulgare
Y25]
Length = 93
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 34/89 (38%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
++ S + A +++ E ++ A+ G V +
Sbjct: 5 STLASRAYDAVRAQPQVSDSAGSYFSSAAAEFAATLQQGEAAAMGAMTGDYDPHALVTAL 64
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q+E + ++ +R+K++ A E+ +M +
Sbjct: 65 AQSELAIETAVTIRNKVVEAYQEILRMAV 93
>gi|330809236|ref|YP_004353698.1| flagellar hook-basal body complex protein fliE [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377344|gb|AEA68694.1| Putative Flagellar hook-basal body complex protein fliE
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 101
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 12 FISHTDTIGMRYDFTQNSN---EEGGSSPISFSALLQDMAKGA-IGDMEKAENVSLAALQ 67
+ I + D T + G F LL+ A + +E +S AL
Sbjct: 1 MTAAIAPIALTPDLTPAAALADGPMGPQGTDFVDLLKSGATQLNAQTGQASEMLSAYALG 60
Query: 68 GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + V + QA+ +L L++ +R++++ A E++++QI
Sbjct: 61 DNIAPHDLVMAMEQAKLSLQLAVEVRNRLVDAYQELTRLQI 101
>gi|90423030|ref|YP_531400.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisB18]
gi|90105044|gb|ABD87081.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisB18]
Length = 105
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
M N++ S + + GG SF +L++ + K++
Sbjct: 1 MATPTVAANAYASLARIMESAGGAGAKPTDLGG--GQSFGDVLKNAVGSVLDSGRKSDAQ 58
Query: 62 SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++A GK+++ + V + + + ++ +++RD+++ + ++ KM I
Sbjct: 59 TVAMASGKSNVMDVVTAVAETDVAVSTLVSVRDRMIQSYEDIMKMSI 105
>gi|312879582|ref|ZP_07739382.1| flagellar hook-basal body complex subunit FliE [Aminomonas
paucivorans DSM 12260]
gi|310782873|gb|EFQ23271.1| flagellar hook-basal body complex subunit FliE [Aminomonas
paucivorans DSM 12260]
Length = 105
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
Q G+ + F +L++ K + A+ + G + E + +AE
Sbjct: 22 AQQEKAGEGTPSVPFEDVLKNSMKQVNALHQGADKMVQKLSLGDVEDVSEVSIAVEKAEM 81
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L + +R+K++ A ++++M +
Sbjct: 82 ALRTLVEVRNKLVDAYQQIARMPV 105
>gi|91976173|ref|YP_568832.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
BisB5]
gi|91682629|gb|ABE38931.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
palustris BisB5]
Length = 101
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 41/73 (56%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
+ SF A++++ + K++ ++A GK+++ + V + + + ++ +++RD+
Sbjct: 29 NGPSFGAMVKEAMGSVLDAGRKSDAQTVAMANGKSNIMDVVTAVAETDVAVSTLVSVRDR 88
Query: 96 ILSAVSEVSKMQI 108
++ + ++ +M I
Sbjct: 89 VIQSYEDILRMPI 101
>gi|251797446|ref|YP_003012177.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
JDR-2]
gi|247545072|gb|ACT02091.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
JDR-2]
Length = 103
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
+ + + + + + SF L+ ++ ++ L G+ + +
Sbjct: 10 AQAVNKLLETAKPQQQATPAESMNSFGQYLESALNSVDAQEKEVHKLNDKYLIGEVDVSQ 69
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +AE +L L+ +R+K + A E+ +M +
Sbjct: 70 VLIATQKAELSLQLTTQIRNKAIDAYQEIMRMSV 103
>gi|152990372|ref|YP_001356094.1| flagellar hook-basal body complex protein FliE [Nitratiruptor sp.
SB155-2]
gi|151422233|dbj|BAF69737.1| flagellar hook-basal body complex protein FliE [Nitratiruptor sp.
SB155-2]
Length = 99
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
I +G++ + + FS LL D+ KA+ GK +
Sbjct: 3 IDGVGQVGIQSSVLNIDDVKDTQHNEGFSDLLTQFIAEVNQDLTKAKEAEKLLQSGKVEN 62
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + I +A+ +L + R+K + A E+ +MQI
Sbjct: 63 LIETMAAIEKADISLRFATEFRNKAIEAYQEIMRMQI 99
>gi|138894739|ref|YP_001125192.1| flagellar hook-basal body protein FliE [Geobacillus
thermodenitrificans NG80-2]
gi|134266252|gb|ABO66447.1| Flagellar hook-basal body protein [Geobacillus thermodenitrificans
NG80-2]
Length = 98
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
+ +G+ T + + F+A L++ +A+ ++ ++G+
Sbjct: 1 MLDGVSRVGLTPVSTVPNPVKPAEVQKQFAAFLKEALNNVNDKQIQADALTEKLVRGENV 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A L L+I +R+K + A E+ +M +
Sbjct: 61 QLHDVMIAAQKASVALQLTIEIRNKAIEAYQEMMRMPL 98
>gi|313673745|ref|YP_004051856.1| flagellar hook-basal body complex subunit flie [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940501|gb|ADR19693.1| flagellar hook-basal body complex subunit FliE [Calditerrivibrio
nitroreducens DSM 19672]
Length = 99
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLN 87
+ ++ S +SFS +L+ + +A+ A+ G+T + + + I +A+ +L
Sbjct: 19 SGSKSTEKSDLSFSDVLKKSIEQVNDAQLQADAAIKKAMSGETDIHDTMIAIQKADVSLK 78
Query: 88 LSIALRDKILSAVSEVSKMQI 108
L + +R+K+L A ++ + Q+
Sbjct: 79 LMMEVRNKLLEAYQDIMRTQV 99
>gi|332799172|ref|YP_004460671.1| Flagellar hook-basal body complex protein fliE [Tepidanaerobacter
sp. Re1]
gi|332696907|gb|AEE91364.1| Flagellar hook-basal body complex protein fliE [Tepidanaerobacter
sp. Re1]
Length = 95
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV-SLAALQGKTSMREAVD 77
+ D N SF + D+ + A ++ E++ + + +
Sbjct: 5 VDNTRDINNNFEALKTQGDKSFGKIFSDVLESANTYQKEYESLLGREVFSDEIDLHNVLI 64
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ +L L++ +R+K + A E+ +MQI
Sbjct: 65 AGEKAKISLELTLQIRNKAMEAYQEIMRMQI 95
>gi|154250383|ref|YP_001411208.1| flagellar hook-basal body complex subunit FliE [Fervidobacterium
nodosum Rt17-B1]
gi|154154319|gb|ABS61551.1| flagellar hook-basal body complex subunit FliE [Fervidobacterium
nodosum Rt17-B1]
Length = 96
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MIE+I G N+ I + SN + S FS +L D + + E +
Sbjct: 1 MIERINGVNNQIQNI------------SNTQSKSGNSEFSKILSDALQSVNEQQKNVEQM 48
Query: 62 SLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
S +GK S + E V +A +L L++ +R++I+ A E+ +MQ
Sbjct: 49 SDDFAKGKISNIHELVVEAEKASISLRLTVEVRNRIVDAYREIMRMQ 95
>gi|295696112|ref|YP_003589350.1| flagellar hook-basal body complex subunit FliE [Bacillus tusciae
DSM 2912]
gi|295411714|gb|ADG06206.1| flagellar hook-basal body complex subunit FliE [Bacillus tusciae
DSM 2912]
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
T ++ E S F L ++A+++ + G+ + + +
Sbjct: 13 AALPSATPSAPEPSRPSG-GFGELFGRALDQVDALQQRADHIVAQFVAGQGPDVHDVMIA 71
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
QA L + +RD+ ++A ++ +MQI
Sbjct: 72 AQQAYLALQTVVQIRDRAVAAYQDIMRMQI 101
>gi|114777412|ref|ZP_01452409.1| hypothetical protein SPV1_13969 [Mariprofundus ferrooxydans PV-1]
gi|114552194|gb|EAU54696.1| hypothetical protein SPV1_13969 [Mariprofundus ferrooxydans PV-1]
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
+ ++ + + +F+ALL + D + A++ + GK + E + I
Sbjct: 14 QSAKISDAGKTTTAGSGNFAALLNSYTQQVNHDHKVADSAAQDLALGKGGNTSETLLAIQ 73
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ + + + +R+K++ A E+S+MQ+
Sbjct: 74 KADLSFQMMMGVRNKLVDAYREISRMQV 101
>gi|220932526|ref|YP_002509434.1| flagellar hook-basal body complex subunit FliE [Halothermothrix
orenii H 168]
gi|219993836|gb|ACL70439.1| flagellar hook-basal body complex subunit FliE [Halothermothrix
orenii H 168]
Length = 100
Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVD 77
+ + D + N S SF+ L+++ +A+ ++ GK + +
Sbjct: 10 VNLLSDGSNRLNRNEEVSYKSFADLIKEKIGDVNHLQVEADKIARDFALGKVDDIHDVTI 69
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ L L++A++ K++SA E+ +MQI
Sbjct: 70 ATEKAQLALKLTLAIQSKVVSAYKEIMRMQI 100
>gi|312126818|ref|YP_003991692.1| flagellar hook-basal body complex subunit flie
[Caldicellulosiruptor hydrothermalis 108]
gi|311776837|gb|ADQ06323.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor hydrothermalis 108]
Length = 104
Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S T ++ ++ +S +SF L +G G ++A+ + L G
Sbjct: 6 NFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 ANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|23009957|ref|ZP_00050815.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 107
Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
++P F+ +LQ G +A+ +L+A GK ++ + V + ++E L +A+R
Sbjct: 33 AATPGGFTGMLQQSLDGVAQAGAQADRAALSAAAGKANVVDVVTAVAESETALQTLVAVR 92
Query: 94 DKILSAVSEVSKMQI 108
D+++SA E+ +M I
Sbjct: 93 DRVISAYEEIMRMPI 107
>gi|327399354|ref|YP_004340223.1| Flagellar hook-basal body complex protein fliE [Hippea maritima DSM
10411]
gi|327181983|gb|AEA34164.1| Flagellar hook-basal body complex protein fliE [Hippea maritima DSM
10411]
Length = 99
Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL-QGKT-SMREAVDHIMQAERT 85
N+ + SF+ +L+ + + ++ + S+ + GK ++++AV I +A+ +
Sbjct: 18 NNPKAEKPEGDSFADILKK-SLDEVNKLQNKADESIKDIASGKMENIQDAVMAIEKADVS 76
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
L L +R+K + A EV +MQ+
Sbjct: 77 LKLLTEIRNKAIEAYKEVMRMQV 99
>gi|302874588|ref|YP_003843221.1| flagellar hook-basal body complex subunit FliE [Clostridium
cellulovorans 743B]
gi|307690801|ref|ZP_07633247.1| flagellar hook-basal body protein FliE [Clostridium cellulovorans
743B]
gi|302577445|gb|ADL51457.1| flagellar hook-basal body complex subunit FliE [Clostridium
cellulovorans 743B]
Length = 105
Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDK 95
+ F ++L+D A NV + + G +T + + + + +A+ +L+L++ +R+K
Sbjct: 33 TVDFLSVLEDKLGDVNSKQVDAYNVQQSFIAGDETDIHKVMISMEEAKISLDLAVQVRNK 92
Query: 96 ILSAVSEVSKMQI 108
+L A E+S++Q+
Sbjct: 93 LLEAYQEISRIQL 105
>gi|291288217|ref|YP_003505033.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
acetiphilus DSM 12809]
gi|290885377|gb|ADD69077.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
acetiphilus DSM 12809]
Length = 101
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
D T++S E + + FS++L+D + G +A++ L G+T + + + +A
Sbjct: 16 DTTKSSQAEKPEASVDFSSMLKDALRDVNGAQIEADDAVQKVLSGETKDIESTMIALQKA 75
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
+ +L + + +R+KI+ A EV + QI
Sbjct: 76 DVSLKMMLEVRNKIMEAYQEVMRTQI 101
>gi|158320511|ref|YP_001513018.1| flagellar hook-basal body protein FliE [Alkaliphilus oremlandii
OhILAs]
gi|158140710|gb|ABW19022.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
oremlandii OhILAs]
Length = 99
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
IS+ + + + ++++E ISFS+ L + + +++++ ++ + G+
Sbjct: 3 ISNINQLTPIKLNSTSTSKERSDDTISFSSFLNESLNKVVELEKESQDYTMKLVTGEIDN 62
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ L L++ +R+K+L A E+ +MQI
Sbjct: 63 LSDVMIAAEKADIALQLTMQIRNKVLDAYREIMRMQI 99
>gi|325981194|ref|YP_004293596.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas sp.
AL212]
gi|325530713|gb|ADZ25434.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas sp.
AL212]
Length = 107
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL- 66
G ++ + T+ + + FS L+ A+ +S +
Sbjct: 5 GIDNILQQLQAASALASGTKKQPGIDEVASVDFSEKLKSAIDQVNKSQLSADRLSEQFVS 64
Query: 67 -QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q + E + + +A + + +R+K+++A E+ MQ+
Sbjct: 65 DQSNVDLHEVMISLQKANVSFQSMVQVRNKLVTAYQEIMNMQV 107
>gi|312621567|ref|YP_004023180.1| flagellar hook-basal body complex subunit flie
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202034|gb|ADQ45361.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor kronotskyensis 2002]
Length = 104
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S T ++ ++ +S +SF L +G G ++A+ + L G
Sbjct: 6 NFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNRLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
T+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 TNPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|222530140|ref|YP_002574022.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor bescii DSM 6725]
gi|222456987|gb|ACM61249.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor bescii DSM 6725]
Length = 104
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S T ++ ++ +S +SF L +G G ++A+ + L G
Sbjct: 6 NFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
T+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 TNPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|296133050|ref|YP_003640297.1| flagellar hook-basal body complex subunit FliE [Thermincola sp. JR]
gi|296031628|gb|ADG82396.1| flagellar hook-basal body complex subunit FliE [Thermincola potens
JR]
Length = 99
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNL 88
E S +SF L+ ++E + + G+ ++ + + +A L
Sbjct: 20 TNEDNSETVSFGEFLKKALNEVNNLQVQSEEMKQKLVTGQIENVHDVMIAAEKANLAFEL 79
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ +R+KI+ A E+ +MQ+
Sbjct: 80 TLQVRNKIVEAYQEIMRMQV 99
>gi|304404243|ref|ZP_07385905.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
curdlanolyticus YK9]
gi|304347221|gb|EFM13053.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
curdlanolyticus YK9]
Length = 102
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 38/93 (40%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
+ + + T SF L+ + A+ + + GK + +
Sbjct: 10 VQPVQVNNNITAVGQSTPAEVTQSFGNFLEQALNSVSAQEQNAQVQATQFMAGKVDVSQV 69
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ QA+ +L L+ +R++++ A ++ +MQ+
Sbjct: 70 MIASEQAQLSLQLTTQIRNRVVEAYQDIMRMQL 102
>gi|323490141|ref|ZP_08095361.1| flagellar hook-basal body protein FliE [Planococcus donghaensis
MPA1U2]
gi|323396189|gb|EGA89015.1| flagellar hook-basal body protein FliE [Planococcus donghaensis
MPA1U2]
Length = 98
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKIL 97
F + +D + +++ ++ + G+ + E + +A +L +++ +R+K++
Sbjct: 28 GFGQIFKDALQEVSAAQNESDKLTNQLITGEVQDVHEVMIASQKASLSLQMTMQVRNKVV 87
Query: 98 SAVSEVSKMQI 108
A EV +MQ+
Sbjct: 88 EAYQEVMRMQV 98
>gi|255523705|ref|ZP_05390671.1| flagellar hook-basal body complex subunit FliE [Clostridium
carboxidivorans P7]
gi|296186709|ref|ZP_06855111.1| flagellar hook-basal body complex protein FliE [Clostridium
carboxidivorans P7]
gi|255512574|gb|EET88848.1| flagellar hook-basal body complex subunit FliE [Clostridium
carboxidivorans P7]
gi|296048746|gb|EFG88178.1| flagellar hook-basal body complex protein FliE [Clostridium
carboxidivorans P7]
Length = 103
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N F+ + + N + + F L+ K+E+ + + ++G
Sbjct: 3 INEFVPDSKIFQGIGIGNNDKNGNAETQSVGFGEFLKGKLDEVNAQQIKSEDTTESFIKG 62
Query: 69 -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+T++ + + +A+ +L L++ +R+K + A E+++ Q+
Sbjct: 63 DETNIHKVMLDTEEAKMSLELAVQIRNKFVEAYQELNRTQL 103
>gi|160903122|ref|YP_001568703.1| flagellar hook-basal body complex subunit FliE [Petrotoga mobilis
SJ95]
gi|160360766|gb|ABX32380.1| flagellar hook-basal body complex subunit FliE [Petrotoga mobilis
SJ95]
Length = 99
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDH 78
G+ + + + FS LL+D + + A+ V+ G T + + +
Sbjct: 10 GIDPNKLAPEKTKQEDKNLDFSKLLKDAIEEVNSIQKNADKVAADYAAGNITDIHQVMIA 69
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A +L L+ + ++I+ A E+ +MQI
Sbjct: 70 AEKASLSLQLTTEVTNRIVEAYKEIMRMQI 99
>gi|51894140|ref|YP_076831.1| flagellar hook-basal body protein [Symbiobacterium thermophilum IAM
14863]
gi|51857829|dbj|BAD41987.1| flagellar hook-basal body protein [Symbiobacterium thermophilum IAM
14863]
Length = 99
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDK 95
SF +L + + D A +++ G+ + + + +A +LNL+I +R+K
Sbjct: 27 GTSFGDVLANAIRQVEQDQRHANEMAVRLAAGEVEDIAQVMIASERASLSLNLAIQVRNK 86
Query: 96 ILSAVSEVSKMQ 107
++ A E+ +M
Sbjct: 87 VIEAYQEIMRMT 98
>gi|197120200|ref|YP_002140627.1| flagellar hook-basal body complex protein FliE [Geobacter
bemidjiensis Bem]
gi|197089560|gb|ACH40831.1| flagellar hook-basal body complex protein FliE [Geobacter
bemidjiensis Bem]
Length = 104
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
+SF L DM + A+ G++ + E + + +A + + +R+
Sbjct: 31 PTVSFGNFLDDMVGKVGELQKTADQSIQGLATGESKGLHEVMLAVEKASISFQMLTQVRN 90
Query: 95 KILSAVSEVSKMQI 108
K + A E+ +M +
Sbjct: 91 KAVEAYQEIMRMPV 104
>gi|222053601|ref|YP_002535963.1| flagellar hook-basal body complex subunit FliE [Geobacter sp.
FRC-32]
gi|221562890|gb|ACM18862.1| flagellar hook-basal body complex subunit FliE [Geobacter sp.
FRC-32]
Length = 102
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
I I + G + SFS L +M A+ + G+
Sbjct: 6 IESGTGIEHAFPSPVAKETAGAAPAESFSKYLGEMVGKVNDMQLSADKSIQSLATGEATG 65
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + + +A + +R+K + A E+ +M +
Sbjct: 66 LHEVMLAVEKASISFQFLNQVRNKAVEAYQEIMRMPV 102
>gi|291562019|emb|CBL40833.1| flagellar hook-basal body complex protein FliE [butyrate-producing
bacterium SS3/4]
Length = 105
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
I+ N FI+ + + F ++L+D + + E
Sbjct: 2 IEQVNGFITPMKGWDAVEKNDKKITGTENGTKSVFQSVLEDTVQNVYDTQKDVEQKQYLL 61
Query: 66 LQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ +AE +L + I+LR+K + A +E+ KM +
Sbjct: 62 ATGQLEDAHSLPIAQAKAELSLEVMISLRNKAMEAYNEILKMSV 105
>gi|157362950|ref|YP_001469717.1| flagellar hook-basal body complex subunit FliE [Thermotoga
lettingae TMO]
gi|157313554|gb|ABV32653.1| flagellar hook-basal body complex subunit FliE [Thermotoga
lettingae TMO]
Length = 97
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAER 84
+ N E S F+ + + + AE +S GK S + E + +A
Sbjct: 14 SLNQTSEKKKSENDFAEIFKSAINKVNQIQKNAEQMSADFALGKISNIHEVIIEAEKASI 73
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
L L+ +R++I+ A E+ +MQ+
Sbjct: 74 ALKLTTEVRNRIVEAYREIMRMQL 97
>gi|312876495|ref|ZP_07736478.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor lactoaceticus 6A]
gi|311796706|gb|EFR13052.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor lactoaceticus 6A]
Length = 104
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S + ++ ++ SS +SF L +G G ++A+ + L G
Sbjct: 6 NFDSISKAFEKQFSSMNTNSASTQSSQVSFVDFLYKALEGVNGLQKEADYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 ANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|309779473|ref|ZP_07674234.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
5_7_47FAA]
gi|308921714|gb|EFP67350.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
5_7_47FAA]
Length = 109
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAE 83
++ E G + F ++L+ +KAE++S + G + + + + +A
Sbjct: 25 GSTASGEAGKPSVDFGSVLKSSLDRVDASQQKAESISRSFEMGNNDVDLHDVMLSLQKAN 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ +R+K++SA + M I
Sbjct: 85 IDMQTAVQVRNKLVSAYQSIMSMSI 109
>gi|83747629|ref|ZP_00944665.1| FliE [Ralstonia solanacearum UW551]
gi|207739710|ref|YP_002258103.1| flagellar hook-basal body complex protein flie [Ralstonia
solanacearum IPO1609]
gi|83725681|gb|EAP72823.1| FliE [Ralstonia solanacearum UW551]
gi|206593092|emb|CAQ59998.1| flagellar hook-basal body complex protein flie [Ralstonia
solanacearum IPO1609]
Length = 110
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S ++ + S + I F A+L+ +KAE
Sbjct: 1 MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60
Query: 61 VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S + G + + + + +A L ++ +R+K++SA + M I
Sbjct: 61 LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKVVSAYQNIMSMSI 110
>gi|322432997|ref|YP_004210246.1| flagellar hook-basal body complex subunit FliE [Acidobacterium sp.
MP5ACTX9]
gi|321165224|gb|ADW70928.1| flagellar hook-basal body complex subunit FliE [Acidobacterium sp.
MP5ACTX9]
Length = 102
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-----GKTS 71
+ + + GG + S S D+ KGAI + E + + G
Sbjct: 6 GGMSIPIPTGMTTPSFGGMTDPSQSGGFSDVLKGAISQVSNLEGSANQQVNRLIQGGNAD 65
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
M + + + +A+ L + +R+KI+SA ++ KMQ
Sbjct: 66 MSKVMISVEKADVAFQLMMQVRNKIVSAYQDIEKMQ 101
>gi|302872572|ref|YP_003841208.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor obsidiansis OB47]
gi|302575431|gb|ADL43222.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor obsidiansis OB47]
Length = 104
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S + ++ ++ +S ISF L +G ++AE + L G
Sbjct: 6 NFDSISKVFEKQFSSINTNSASNQTSQISFVDFLYKALEGVDSLQKEAEYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 ANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|17548610|ref|NP_521950.1| flagellar hook-basal body protein FliE [Ralstonia solanacearum
GMI1000]
gi|300696959|ref|YP_003747620.1| flagellar hook-basal body complex protein fliE [Ralstonia
solanacearum CFBP2957]
gi|38503107|sp|Q8XSS8|FLIE_RALSO RecName: Full=Flagellar hook-basal body complex protein FliE
gi|17430858|emb|CAD17540.1| probable flagellar hook-basal body complex protein flie [Ralstonia
solanacearum GMI1000]
gi|299073683|emb|CBJ53203.1| Flagellar hook-basal body complex protein fliE [Ralstonia
solanacearum CFBP2957]
Length = 110
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S ++ + S + I F A+L+ +KAE
Sbjct: 1 MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60
Query: 61 VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S + G + + + + +A L ++ +R+K++SA + M I
Sbjct: 61 LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSAYQNIMSMSI 110
>gi|302670717|ref|YP_003830677.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
proteoclasticus B316]
gi|302395190|gb|ADL34095.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
proteoclasticus B316]
Length = 112
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 38 ISFSALLQDMAKGAIGD---MEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALR 93
SFS++ + + AEN + G+T+ + + +A+ L +IA+R
Sbjct: 38 NSFSSIFGRAMENINTTNAYLSDAENEEIKWALGETNNTHDLSIALQKAQTALQYTIAVR 97
Query: 94 DKILSAVSEVSKMQI 108
D+ LSA E+++MQI
Sbjct: 98 DRALSAYREITQMQI 112
>gi|300693363|ref|YP_003749336.1| flagellar hook-basal body complex protein flie [Ralstonia
solanacearum PSI07]
gi|299075400|emb|CBJ34695.1| Flagellar hook-basal body complex protein fliE [Ralstonia
solanacearum PSI07]
Length = 110
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S ++ + S + I F A+L+ +KAE
Sbjct: 1 MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDSAKVSIDFGAVLKSSLDKVDASQQKAET 60
Query: 61 VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S + G + + + + +A L ++ +R+K++SA + M I
Sbjct: 61 LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSAYQNIMSMSI 110
>gi|313901522|ref|ZP_07834969.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
subterraneus DSM 13965]
gi|313468217|gb|EFR63684.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
subterraneus DSM 13965]
Length = 125
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNL 88
GG P SF L + G +A+ ++ + G+ + + + +A + L
Sbjct: 47 TGPGGVGP-SFLQELARALQQLEGAAGEADAMARRLVTGQVQDLSQVMVASEKARLAIEL 105
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ LR+K L A E+ +M +
Sbjct: 106 AVQLRNKALEAYQEIMRMPV 125
>gi|258592506|emb|CBE68815.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 100
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
++ + G S SF+ LL++ +A+ ++ +G++ + + I +A+ +
Sbjct: 19 SATKTGVSGEGSFAGLLREAVSQTDRLQHEADALAEQVAKGQSGDLAATMIAIEKAQISF 78
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L + +R+K++ A E+ +M +
Sbjct: 79 QLMLQVRNKVVEAYQEIMRMPV 100
>gi|253702509|ref|YP_003023698.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M21]
gi|251777359|gb|ACT19940.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M21]
Length = 104
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
+SF L +M + A+ G++ + E + + +A + + +R+
Sbjct: 31 PTVSFGNFLDEMVGKVGELQKTADQSIQGLATGESKGLHEVMLAVEKASISFQMLTQVRN 90
Query: 95 KILSAVSEVSKMQI 108
K + A E+ +M +
Sbjct: 91 KAVEAYQEIMRMPV 104
>gi|57167571|ref|ZP_00366711.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
coli RM2228]
gi|305433077|ref|ZP_07402233.1| flagellar hook-basal body complex protein FliE [Campylobacter coli
JV20]
gi|57020693|gb|EAL57357.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
coli RM2228]
gi|304443778|gb|EFM36435.1| flagellar hook-basal body complex protein FliE [Campylobacter coli
JV20]
Length = 99
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
F+ +L++ + + AE G+ + +A I +AE ++ + +R+K +S
Sbjct: 30 FAKMLKNEIEDLDKTQKTAEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAIS 89
Query: 99 AVSEVSKMQI 108
A E+++ QI
Sbjct: 90 AYKEITRTQI 99
>gi|317129210|ref|YP_004095492.1| flagellar hook-basal body complex subunit FliE [Bacillus
cellulosilyticus DSM 2522]
gi|315474158|gb|ADU30761.1| flagellar hook-basal body complex subunit FliE [Bacillus
cellulosilyticus DSM 2522]
Length = 102
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKIL 97
SF +L + + ++ ++ ++G+ + + + +A TL ++ +R+K +
Sbjct: 32 SFKKMLSNAIQNTNDAQVNSQMMTERLVRGENVDLHDVLITAEKASVTLQTTVEIRNKAI 91
Query: 98 SAVSEVSKMQI 108
A E+ +MQ+
Sbjct: 92 EAYQEIMRMQV 102
>gi|254519423|ref|ZP_05131479.1| flagellar hook-basal body protein FliE [Clostridium sp. 7_2_43FAA]
gi|226913172|gb|EEH98373.1| flagellar hook-basal body protein FliE [Clostridium sp. 7_2_43FAA]
Length = 100
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N+F+ + S SF + L+D A+N++ + G
Sbjct: 3 VNNFVPSEKIFESSINANNIKTSP---SENSFQSALKDSLDKLNEKQINADNMTNDFISG 59
Query: 69 K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
K + E + + +++ +L L+I +R+K++ AV E+++MQ+
Sbjct: 60 KDVEVHEMMLSMEESKMSLQLAIQVRNKVVEAVQELTRMQL 100
>gi|312135855|ref|YP_004003193.1| flagellar hook-basal body complex subunit flie
[Caldicellulosiruptor owensensis OL]
gi|311775906|gb|ADQ05393.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor owensensis OL]
Length = 104
Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S + ++ ++ +S ISF L +G ++AE + L G
Sbjct: 6 NFDSISKVFEKQFSSINTNSASNQTSQISFVDFLYKALEGVDSLQKEAEYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
T+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 TNPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|317121814|ref|YP_004101817.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
marianensis DSM 12885]
gi|315591794|gb|ADU51090.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
marianensis DSM 12885]
Length = 122
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
G SF L + G +A+ ++ L G + + + +A + L+
Sbjct: 44 GSSGGEGPSFLQELARALQQLEGTAGQADAMAQRLLTGDVQDLSQVMVATEKARLAIELA 103
Query: 90 IALRDKILSAVSEVSKMQI 108
+ LR+K L A E+ +M +
Sbjct: 104 VQLRNKALEAYQEIMRMPV 122
>gi|289578435|ref|YP_003477062.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
italicus Ab9]
gi|297544711|ref|YP_003677013.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|289528148|gb|ADD02500.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
italicus Ab9]
gi|296842486|gb|ADH61002.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 98
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
++ + + + GS +FS L++ A + G+
Sbjct: 1 MVNQITPVNPVSLNSTLETTQSGSKIETFSDFLKEALNKVNDLQLTAMKNDRKLVTGEID 60
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ L L+I +++K+L A E+ +M +
Sbjct: 61 DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98
>gi|242309758|ref|ZP_04808913.1| flagellar hook-basal body protein FliE [Helicobacter pullorum MIT
98-5489]
gi|239523759|gb|EEQ63625.1| flagellar hook-basal body protein FliE [Helicobacter pullorum MIT
98-5489]
Length = 105
Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
+ N SS +F ++L+D + +E V G+ + +A I +AE ++
Sbjct: 24 SPNNNANSSDKTFGSMLKDAFDEVNTHQKTSEQVMADMATGQIKDIHQAAIAIGKAENSM 83
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L + +R+K +SA E+ + QI
Sbjct: 84 KLMLEVRNKAISAYKELIRTQI 105
>gi|312792646|ref|YP_004025569.1| flagellar hook-basal body complex subunit flie
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179786|gb|ADQ39956.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 104
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
+F S + ++ ++ +S +SF L +G G ++A+ + L G
Sbjct: 6 NFDSISKAFEKQFSSMNTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLFLLGLS 65
Query: 70 TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++A+ +A L L++ +R+KIL A +E+ +MQ+
Sbjct: 66 ANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104
>gi|256833242|ref|YP_003161969.1| flagellar hook-basal body complex subunit FliE [Jonesia
denitrificans DSM 20603]
gi|256686773|gb|ACV09666.1| flagellar hook-basal body complex subunit FliE [Jonesia
denitrificans DSM 20603]
Length = 110
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 5 QIQGTNSFISHTDTIGMRY--DFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEKAEN 60
I + S TD + + GG + F +L + G EK++
Sbjct: 2 SIPAIGALTSATDPNALMAVTSTGLITPPAGGGTVSDSTFGQMLTNSIDNLQGLQEKSQG 61
Query: 61 VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+++ A+ G + + +A+ TL L+ A+R+K + A +E+ +MQ
Sbjct: 62 LAVQAVTGDLDDIHDYTIASTEAKVTLELTAAIRNKAVDAFNEIMRMQ 109
>gi|224417696|ref|ZP_03655702.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
98-5491]
gi|253827045|ref|ZP_04869930.1| flagellar basal body protein [Helicobacter canadensis MIT 98-5491]
gi|313141239|ref|ZP_07803432.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
98-5491]
gi|253510451|gb|EES89110.1| flagellar basal body protein [Helicobacter canadensis MIT 98-5491]
gi|313130270|gb|EFR47887.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
98-5491]
Length = 105
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIAL 92
SF +L+D + + E G+ + +A I +AE ++ L + +
Sbjct: 30 NPPNKSFENMLKDAFEEVNEHQKTTEQAMADMATGQIKDIHQAAIAIGKAENSMKLMLEV 89
Query: 93 RDKILSAVSEVSKMQI 108
R+K +SA E+ + QI
Sbjct: 90 RNKAISAYKELIRTQI 105
>gi|299068776|emb|CBJ40016.1| Flagellar hook-basal body complex protein fliE [Ralstonia
solanacearum CMR15]
Length = 110
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S ++ + S + I F A+L+ +KAE
Sbjct: 1 MDITNANSVVSLMNSVLAPSSKVGGLSGSAGDSAKVSIDFGAVLKSSLDKVDASQQKAET 60
Query: 61 VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S + G + + + + +A L ++ +R+K++SA + M I
Sbjct: 61 LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKMVSAYQNIMSMSI 110
>gi|297617137|ref|YP_003702296.1| flagellar hook-basal body complex subunit FliE [Syntrophothermus
lipocalidus DSM 12680]
gi|297144974|gb|ADI01731.1| flagellar hook-basal body complex subunit FliE [Syntrophothermus
lipocalidus DSM 12680]
Length = 105
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA-ALQGKTSMREAVDHIMQAERTLNL 88
+ + SFS+ L+ E+A +L A G+ + + + +A L L
Sbjct: 26 SASAADNSKSFSSYLKAALNEVNQLQEEAGQSALNLATGGEADVHQTMIAYEKAALALQL 85
Query: 89 SIALRDKILSAVSEVSKMQI 108
+I +R+K++ A E+ +MQ+
Sbjct: 86 TIEVRNKLIEAYQEIMRMQM 105
>gi|291613069|ref|YP_003523226.1| flagellar hook-basal body complex subunit FliE [Sideroxydans
lithotrophicus ES-1]
gi|291583181|gb|ADE10839.1| flagellar hook-basal body complex subunit FliE [Sideroxydans
lithotrophicus ES-1]
Length = 108
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNL 88
+ + F+ +L+ G +AE++ A + G K S+ + + + +A +
Sbjct: 29 APAQTGGVDFADVLKSSLDGVNQAQHQAEDLQKAFVLGDDKVSLSDTMIAMQKANISFQT 88
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ +R+K+++A +++ MQ+
Sbjct: 89 AVQVRNKVVAAYNDIMNMQV 108
>gi|90021834|ref|YP_527661.1| hypothetical protein Sde_2189 [Saccharophagus degradans 2-40]
gi|123396024|sp|Q21IN0|FLIE_SACD2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|89951434|gb|ABD81449.1| flagellar hook-basal body complex protein (FliE) [Saccharophagus
degradans 2-40]
Length = 121
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I + N ++ +G + N+ + F LL+ + +
Sbjct: 12 MEIRSFKAQNQAMNSVQGVGNSLEGVNNTRGTQQVNGPRFGELLEQAVSKVNEVQQASGA 71
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S A +QG + + + +A + + +R+K++ A +V M I
Sbjct: 72 MSQAYIQGDSNVGITDVMIASQKAGVAFDAMVQVRNKLVEAYKDVMNMPI 121
>gi|212639568|ref|YP_002316088.1| flagellar hook-basal body protein FliE [Anoxybacillus flavithermus
WK1]
gi|212561048|gb|ACJ34103.1| Flagellar hook-basal body protein FliE [Anoxybacillus flavithermus
WK1]
Length = 97
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
I I + Q + + + +FS L++ +++ ++ +G+
Sbjct: 1 MIDRIQRISLSPTVQQQAIKPAEAQ-RAFSQFLKEAINEVNKQQIESDQLTTKLAKGENV 59
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A +L L+I +R+K++ A EV +MQ+
Sbjct: 60 DLHNVMIASQKASVSLQLAIEVRNKVIEAYQEVMRMQV 97
>gi|168698711|ref|ZP_02730988.1| flagellar hook-basal body complex protein (FliE) [Gemmata
obscuriglobus UQM 2246]
Length = 103
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
++ + + F+ +L + G I A+ + G+ + +
Sbjct: 15 LQPLLAPQAPADLTPGGAPFAGVLNSVLNGNIEANRGADAAVQSLATGEAQDLHTVSLAV 74
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
QA+ + L + LR+++ A EV++MQ+
Sbjct: 75 AQADLSFRLILELRNRLTDAFQEVTRMQV 103
>gi|297530607|ref|YP_003671882.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
C56-T3]
gi|297253859|gb|ADI27305.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
C56-T3]
Length = 98
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
I IG+ + + + F+A ++ +A+ ++ ++G+
Sbjct: 1 MIDGASRIGLTMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENV 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A TL L++ +R+K + A E+ +M +
Sbjct: 61 QLHDVIIAAQKASITLQLTLEIRNKAIEAYQEMMRMPL 98
>gi|187926909|ref|YP_001893254.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12J]
gi|241665238|ref|YP_002983597.1| flagellar hook-basal body protein FliE [Ralstonia pickettii 12D]
gi|187728663|gb|ACD29827.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12J]
gi|240867265|gb|ACS64925.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12D]
Length = 108
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMREAV 76
+ ++ E G + F ++L+ +KAE +S + + +
Sbjct: 17 LAPSTVGGSTASGETGKPSVDFGSVLKSSLDRVDASQQKAEAISRSFEMSNNDVDLHDVM 76
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A ++ +R+K++SA + M +
Sbjct: 77 LSLQKANIDFQTAVQVRNKLVSAYQSIMSMSV 108
>gi|220929469|ref|YP_002506378.1| flagellar hook-basal body complex subunit FliE [Clostridium
cellulolyticum H10]
gi|219999797|gb|ACL76398.1| flagellar hook-basal body complex subunit FliE [Clostridium
cellulolyticum H10]
Length = 102
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M +++I I ++ D +N+ E +SF L+ ++A+N
Sbjct: 1 MAVDKIGEVQRLIPDNLSLKGIND-NKNTPE------VSFGDYLKSALTKVSDLEDQAKN 53
Query: 61 VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ GKT + E + +A L ++ +R+KIL A SE+ +MQI
Sbjct: 54 LQEDFALGKTDNIPEVLIAGEKASVALQFTMQIRNKILDAYSEIMRMQI 102
>gi|20807890|ref|NP_623061.1| flagellar hook-basal body protein FliE [Thermoanaerobacter
tengcongensis MB4]
gi|20516455|gb|AAM24665.1| Flagellar hook-basal body protein [Thermoanaerobacter tengcongensis
MB4]
Length = 98
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
I+ I N+ S SFS L++ +A + G+
Sbjct: 1 MINQITGIQPVTLTETNNIAPSTSKINSFSDFLKEALNKVNDLQLQAIEDDKKLVTGEID 60
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + ++A+ L L+I +++K+L A E+ +M +
Sbjct: 61 DINKVMIDAVKADIALQLTIQIKNKVLEAYQEIMRMPL 98
>gi|323705447|ref|ZP_08117022.1| flagellar hook-basal body complex subunit FliE
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323535349|gb|EGB25125.1| flagellar hook-basal body complex subunit FliE
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 95
Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREA 75
+ I S+ SF +L+ KA+ + G +
Sbjct: 3 NPISQISAVGSVGTSNATSNTSSFGDILKTAISDVNNLQLKAQQDDQMLVTGDINDIHNV 62
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A+ L L+I +++KIL A E+ +M +
Sbjct: 63 MIDATKADIALELTIQIKNKILDAYQEIMRMPV 95
>gi|297584034|ref|YP_003699814.1| flagellar hook-basal body complex subunit FliE [Bacillus
selenitireducens MLS10]
gi|297142491|gb|ADH99248.1| flagellar hook-basal body complex subunit FliE [Bacillus
selenitireducens MLS10]
Length = 95
Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVD 77
+G QN + SF L D +++++ +G+ + + +
Sbjct: 5 MGPANQVQQNRQVTPHEAQQSFKTWLGDAINDMNQRQVDSQHMTERMARGENVDLHDVMI 64
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A TL ++ +RDK++ A E+ +MQ+
Sbjct: 65 TAQKASITLETTVEVRDKVIEAYQEIMRMQV 95
>gi|303240289|ref|ZP_07326808.1| flagellar hook-basal body complex subunit FliE [Acetivibrio
cellulolyticus CD2]
gi|302592199|gb|EFL61928.1| flagellar hook-basal body complex subunit FliE [Acetivibrio
cellulolyticus CD2]
Length = 102
Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
IS ++I ++ ++ S SF+ L+D +++ ++ GKT
Sbjct: 6 ISGFNSIPSLSKIGLSNTDKADSVEGSFANYLKDALTNVSNLEKESTALTEDFAAGKTDN 65
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ L ++ +R+KI+ A E+ MQ+
Sbjct: 66 IHQVMIAAEKADVALQFTMQIRNKIMDAYKEIMNMQV 102
>gi|225181612|ref|ZP_03735053.1| flagellar hook-basal body complex subunit FliE [Dethiobacter
alkaliphilus AHT 1]
gi|225167720|gb|EEG76530.1| flagellar hook-basal body complex subunit FliE [Dethiobacter
alkaliphilus AHT 1]
Length = 99
Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKIL 97
F+ L A+ + G+ + + + + QA+ + L++ +R+K++
Sbjct: 29 GFAGTLHKALGEVNQLQVNADEAAQKLAMGEAEDIHQVMIAMEQAKMAMQLTVQVRNKVV 88
Query: 98 SAVSEVSKMQI 108
A EVS+MQ+
Sbjct: 89 EAYQEVSRMQL 99
>gi|83647862|ref|YP_436297.1| flagellar hook-basal body complex protein FliE [Hahella chejuensis
KCTC 2396]
gi|83635905|gb|ABC31872.1| flagellar hook-basal body complex protein (FliE) [Hahella
chejuensis KCTC 2396]
Length = 118
Score = 42.8 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 36/105 (34%), Gaps = 2/105 (1%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
I+ + + + + Q FS +L+ + + + A
Sbjct: 14 IRNLRAQMRQSARVEQELSAEQLKPTRKPEEVPEFSQMLKQAVDNVNDLQKTSSELRTAY 73
Query: 66 LQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
QG + + + + ++ +R+K++ A ++ KM I
Sbjct: 74 EQGDPQADLTKVMIASQKSSVAFQALTQVRNKVVQAYEDIMKMPI 118
>gi|121533764|ref|ZP_01665591.1| flagellar hook-basal body complex subunit FliE [Thermosinus
carboxydivorans Nor1]
gi|121307755|gb|EAX48670.1| flagellar hook-basal body complex subunit FliE [Thermosinus
carboxydivorans Nor1]
Length = 99
Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
+S F+ L D + ++A+ SL GK + E V +A L L+
Sbjct: 21 TSSQNSHKDFAQFLTDALRDVNRLQQEAQQASLNLAAGKVQDISEVVIAAEKATIALQLT 80
Query: 90 IALRDKILSAVSEVSKMQI 108
+ +R+K++ A EV +MQ+
Sbjct: 81 MQVRNKVVDAYQEVMRMQV 99
>gi|32490810|ref|NP_871064.1| hypothetical protein WGLp061 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166016|dbj|BAC24207.1| fliE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 109
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRD 94
+ FS + + K ++ +EN+S L GK + E + + ++ +LN I + +
Sbjct: 36 SVVFSDIFEKNIKKINSNIINSENLSKEFLLGKSNVGINEVMIEMQKSAISLNFGIQVNN 95
Query: 95 KILSAVSEVSKMQI 108
KI+ A E+ M I
Sbjct: 96 KIVGAYQEIMNMSI 109
>gi|207728373|ref|YP_002256767.1| flagellar hook-basal body complex protein flie [Ralstonia
solanacearum MolK2]
gi|206591619|emb|CAQ57231.1| flagellar hook-basal body complex protein flie [Ralstonia
solanacearum MolK2]
Length = 110
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S ++ + S + I F A+L+ +KAE
Sbjct: 1 MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60
Query: 61 VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+S + G + + + + +A L + +R+K++SA + M I
Sbjct: 61 LSRSFELGNNDVDLHDVMLSLQKANIDLQTAAQVRNKLVSAYQNIMSMSI 110
>gi|91791421|ref|YP_561072.1| flagellar hook-basal body complex protein (FliE) [Shewanella
denitrificans OS217]
gi|91713423|gb|ABE53349.1| flagellar hook-basal body complex protein (FliE) [Shewanella
denitrificans OS217]
Length = 96
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLS 89
+SF +L D DM A + +G+ ++ E + + QA+ +L L+
Sbjct: 18 APSQLPEVSFVEMLGDGVHKVSNDMNVANELVEKFARGEPIAVDEVMVAMEQAQLSLKLA 77
Query: 90 IALRDKILSAVSEVSKMQI 108
+ +++K+ +A E+ +MQ+
Sbjct: 78 VEVKNKLTAAYQELFRMQV 96
>gi|188586016|ref|YP_001917561.1| flagellar hook-basal body complex subunit FliE [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350703|gb|ACB84973.1| flagellar hook-basal body complex subunit FliE [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 96
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MR 73
+ IG N + + ++F L D +++E ++ G+ +
Sbjct: 2 RIEGIGENTVNPINQGNKQKAEDLNFREFLSDAISKVDDIQKESEVLNQKLAVGEVDNLH 61
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ V +AE LNL++ +R++++ E+ +MQI
Sbjct: 62 DVVIATEKAELALNLTLEVRNQLIETHDELMRMQI 96
>gi|77918797|ref|YP_356612.1| flagellar hook-basal body complex protein FliE [Pelobacter
carbinolicus DSM 2380]
gi|77544880|gb|ABA88442.1| flagellar hook-basal body complex protein FliE [Pelobacter
carbinolicus DSM 2380]
Length = 99
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
++ + + SF LL + +A+ G++ ++ E + +
Sbjct: 11 LQTAIKAGGEAQTKKTGNSFGDLLAEAIDEVGKTQAQADQAIEKLQTGESRNIHEVMIAM 70
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A ++ L + +R+K++ A E+ +MQI
Sbjct: 71 EKAGISMRLMVQMRNKVVEAYQEIMRMQI 99
>gi|126653750|ref|ZP_01725668.1| flagellar hook-basal body protein [Bacillus sp. B14905]
gi|169827119|ref|YP_001697277.1| flagellar hook-basal body complex protein [Lysinibacillus
sphaericus C3-41]
gi|126589714|gb|EAZ83850.1| flagellar hook-basal body protein [Bacillus sp. B14905]
gi|168991607|gb|ACA39147.1| Flagellar hook-basal body complex protein [Lysinibacillus
sphaericus C3-41]
Length = 93
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
+ SF+ L++ ++N + ++G+ + E + +A TLN +I +R+
Sbjct: 20 AQQSFANSLKEAIAKVNDQQITSDNFTQKLIKGENVELHEVMIASQKASITLNATIEVRN 79
Query: 95 KILSAVSEVSKMQI 108
K++ A E+ +M +
Sbjct: 80 KVIEAYQEIMRMSV 93
>gi|322421736|ref|YP_004200959.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M18]
gi|320128123|gb|ADW15683.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M18]
Length = 101
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
Q + G+ + F L++M A+ A G++ + E + + +A
Sbjct: 18 VQEAQGTQGNPAVGFGKFLEEMVSKVNEQQVTADKSIQALATGESKGLHEVMLAVEKASV 77
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ + +R+K + A E+ +M +
Sbjct: 78 SFQMLTQVRNKAVEAYQEIMRMPV 101
>gi|224370788|ref|YP_002604952.1| FliE [Desulfobacterium autotrophicum HRM2]
gi|223693505|gb|ACN16788.1| FliE [Desulfobacterium autotrophicum HRM2]
Length = 96
Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
SF L K ++ + + G+ + E + + +A+ +L L + +R K++
Sbjct: 27 SFLDRLNAAVKDVNSKQNLGDDAAEKVVTGELGIHEGMLALGEADTSLRLMVQVRSKVME 86
Query: 99 AVSEVSKMQI 108
A + MQI
Sbjct: 87 AYKTIINMQI 96
>gi|269836583|ref|YP_003318811.1| flagellar hook-basal body complex subunit FliE [Sphaerobacter
thermophilus DSM 20745]
gi|269785846|gb|ACZ37989.1| flagellar hook-basal body complex subunit FliE [Sphaerobacter
thermophilus DSM 20745]
Length = 100
Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMRE 74
+G Q + + + SF+ +++ + A+++++ G+ + E
Sbjct: 8 PAEVGASTAIIQPRSTQS-ADGASFTNMIEQALGELNQSLNLADDLAMRLAAGEEVDLHE 66
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + A L +I +R++++ A E+ M +
Sbjct: 67 VMIALEMAGIGLQTAIQIRNRVIEAYKEIMAMPV 100
>gi|86148945|ref|ZP_01067177.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|88596983|ref|ZP_01100219.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 84-25]
gi|218562178|ref|YP_002343957.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|38503222|sp|Q9PHY8|FLIE_CAMJE RecName: Full=Flagellar hook-basal body complex protein FliE
gi|85840303|gb|EAQ57560.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|88190672|gb|EAQ94645.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359884|emb|CAL34672.1| flagellar hook-basal body complex protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|315927024|gb|EFV06379.1| Flagellar hook-basal body complex protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315928562|gb|EFV07859.1| Flagellar hook-basal body complex protein [Campylobacter jejuni
subsp. jejuni 305]
Length = 98
Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
N ++ F+ +L++ E E G+ + +A I +AE ++
Sbjct: 17 NKSQNSTGIGDEFAKMLKNEINDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESSM 76
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K +SA E+++ QI
Sbjct: 77 KFMLEVRNKAISAYKEITRTQI 98
>gi|167037670|ref|YP_001665248.1| flagellar hook-basal body protein FliE [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750739|ref|ZP_05491624.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
ethanolicus CCSD1]
gi|307264865|ref|ZP_07546427.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
wiegelii Rt8.B1]
gi|320116085|ref|YP_004186244.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|326389484|ref|ZP_08211051.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
ethanolicus JW 200]
gi|166856504|gb|ABY94912.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750322|gb|EEU63341.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
ethanolicus CCSD1]
gi|306920123|gb|EFN50335.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
wiegelii Rt8.B1]
gi|319929176|gb|ADV79861.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|325994489|gb|EGD52914.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
ethanolicus JW 200]
Length = 98
Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
++ + + + GS +FS L++ A + G+
Sbjct: 1 MVNQITPVNPVTLDSTLEATQNGSKIDTFSDFLKEAFNKVNDLQLTAMKNDQKLVTGEID 60
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ L L+I +++K+L A E+ +M +
Sbjct: 61 DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98
>gi|150390488|ref|YP_001320537.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
metalliredigens QYMF]
gi|149950350|gb|ABR48878.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
metalliredigens QYMF]
Length = 101
Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLS 89
+E +S +F+ L ++ A + A+N S+ G+ + EA+ +A+ +L
Sbjct: 23 KESNNSQTTFNDLFKNAINEANILDQMAQNDSVKLATGELDNIHEAMITAQKADVSLQFI 82
Query: 90 IALRDKILSAVSEVSKMQI 108
+ +R+K+L A E+ +MQI
Sbjct: 83 MQVRNKVLDAYREIMRMQI 101
>gi|57242335|ref|ZP_00370274.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
upsaliensis RM3195]
gi|315638446|ref|ZP_07893623.1| flagellar hook-basal body complex protein FliE [Campylobacter
upsaliensis JV21]
gi|57017015|gb|EAL53797.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
upsaliensis RM3195]
gi|315481437|gb|EFU72064.1| flagellar hook-basal body complex protein FliE [Campylobacter
upsaliensis JV21]
Length = 98
Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
+ +N + F+ +L++ + EK E G+ + +A I +AE +
Sbjct: 16 KTNNTQDKGIGDEFAKMLKNEIEDLNTAQEKGEAAMTDIATGQVKDLHQAAIAITKAESS 75
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ + +R+K +SA E+++ QI
Sbjct: 76 MKFMLEVRNKAISAYKEITRTQI 98
>gi|56419753|ref|YP_147071.1| flagellar hook-basal body protein FliE [Geobacillus kaustophilus
HTA426]
gi|261419418|ref|YP_003253100.1| flagellar hook-basal body protein FliE [Geobacillus sp. Y412MC61]
gi|319766233|ref|YP_004131734.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
Y412MC52]
gi|56379595|dbj|BAD75503.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
gi|261375875|gb|ACX78618.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
Y412MC61]
gi|317111099|gb|ADU93591.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
Y412MC52]
Length = 98
Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
I IG+ + + + F+A ++ +A+ ++ ++G+
Sbjct: 1 MIDGASRIGLTMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENV 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A TL L++ +R+K + A E+ +M +
Sbjct: 61 QLHDVMIAAQKASITLQLTLEIRNKAIEAYQEMMRMPL 98
>gi|326204627|ref|ZP_08194483.1| flagellar hook-basal body complex subunit FliE [Clostridium
papyrosolvens DSM 2782]
gi|325985194|gb|EGD46034.1| flagellar hook-basal body complex subunit FliE [Clostridium
papyrosolvens DSM 2782]
Length = 102
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIAL 92
+ +SF L+ ++ + GKT + E + +A L ++ +
Sbjct: 27 NTPEVSFGDYLKSALTKVTDLENQSNKLQEDFALGKTDNIPEVLIAGEKASVALQFTMQI 86
Query: 93 RDKILSAVSEVSKMQI 108
R+KIL A SE+ +MQI
Sbjct: 87 RNKILDAYSEIMRMQI 102
>gi|86151745|ref|ZP_01069959.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 260.94]
gi|85841374|gb|EAQ58622.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 260.94]
Length = 98
Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
N ++ F+ +L++ E E G+ + +A I +AE ++
Sbjct: 17 NKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEATMTDIATGQVKDLHQAAIAITKAESSM 76
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K +SA E+++ QI
Sbjct: 77 KFMLEVRNKAISAYKEITRTQI 98
>gi|328958285|ref|YP_004375671.1| flagellar hook-basal body protein FliE [Carnobacterium sp. 17-4]
gi|328674609|gb|AEB30655.1| flagellar hook-basal body protein FliE [Carnobacterium sp. 17-4]
Length = 106
Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 10 NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
N+ +S + E + SFS +L++ A+ + G
Sbjct: 8 NNLVSGPTQTALTGG-LNEQPTEAANGLSSFSGMLENAMSSLNEQQVTADQGVQDLITGN 66
Query: 70 TS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
T + + +A+ +L L++ LR+K L A +E+ MQ
Sbjct: 67 TDNLHNVMIQTSEAQLSLELALQLRNKGLEAYNEIKNMQ 105
>gi|149178730|ref|ZP_01857313.1| probable flagellar hook-basal body complex protein FliE
[Planctomyces maris DSM 8797]
gi|148842428|gb|EDL56808.1| probable flagellar hook-basal body complex protein FliE
[Planctomyces maris DSM 8797]
Length = 104
Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR-EAVDH 78
G+ +++ + SF ++ A ++E A L G+ + E
Sbjct: 15 GLSPAGLKDAGAGTPAGAPSFQNMMLQSLDSANQLQLQSEQAIQAGLLGEDITQAEVFSS 74
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
I +A+ L + + +R+K+L A +E+ KMQ+
Sbjct: 75 IKKADLALRMMVQMRNKLLEAYNEIQKMQM 104
>gi|163781741|ref|ZP_02176741.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882961|gb|EDP76465.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 97
Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
SP F+ L++ E A+NV A L+G+ + V +A LNL I +R+
Sbjct: 24 SPEDFADALKEFVLWVNSQQENAKNVKEAVLRGEDVPLHRMVIEFEKAGVALNLMIEVRN 83
Query: 95 KILSAVSEVSKMQI 108
++L E+ +MQ+
Sbjct: 84 RLLEGYQELLRMQV 97
>gi|239826612|ref|YP_002949236.1| flagellar hook-basal body protein FliE [Geobacillus sp. WCH70]
gi|239806905|gb|ACS23970.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
WCH70]
Length = 100
Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMR 73
H + + + + +FS L+D + +A ++ ++G+ +
Sbjct: 7 HRSLFSEATNVASQATKPADAQ-KAFSTFLKDALNKVNDEQLQASQLTEKLVKGENVDLH 65
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A +L L++ +R+K++ A E+ +MQI
Sbjct: 66 KVMIASQKASISLQLTLEVRNKVIEAYQEMMRMQI 100
>gi|32266908|ref|NP_860940.1| flagellar hook-basal body protein FliE [Helicobacter hepaticus ATCC
51449]
gi|38502918|sp|Q7VGB3|FLIE_HELHP RecName: Full=Flagellar hook-basal body complex protein FliE
gi|32262960|gb|AAP78006.1| flagellar hook-basal body protein FliE [Helicobacter hepaticus ATCC
51449]
Length = 103
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDK 95
+ F L+D + + + +E G+ + +A I +AE ++ + + +R+K
Sbjct: 31 GLDFIKTLKDSIQDVNTEQQTSEKALADIASGQVKDLHQAAIAINRAENSMKVMLEVRNK 90
Query: 96 ILSAVSEVSKMQI 108
++A E+ + QI
Sbjct: 91 AINAYKEILRTQI 103
>gi|57238274|ref|YP_178645.1| flagellar hook-basal body protein FliE [Campylobacter jejuni
RM1221]
gi|86153325|ref|ZP_01071529.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|121613420|ref|YP_001000226.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
jejuni 81-176]
gi|148925897|ref|ZP_01809584.1| putative flagellar hook-basal body complex protein [Campylobacter
jejuni subsp. jejuni CG8486]
gi|157414807|ref|YP_001482063.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
jejuni 81116]
gi|167005181|ref|ZP_02270939.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 81-176]
gi|205355382|ref|ZP_03222153.1| putative flagellar hooK basal body complex protein [Campylobacter
jejuni subsp. jejuni CG8421]
gi|283955948|ref|ZP_06373438.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 1336]
gi|57167078|gb|AAW35857.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni RM1221]
gi|85843051|gb|EAQ60262.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|87250167|gb|EAQ73125.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 81-176]
gi|145844883|gb|EDK21987.1| putative flagellar hook-basal body complex protein [Campylobacter
jejuni subsp. jejuni CG8486]
gi|157385771|gb|ABV52086.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 81116]
gi|205346616|gb|EDZ33248.1| putative flagellar hooK basal body complex protein [Campylobacter
jejuni subsp. jejuni CG8421]
gi|283792608|gb|EFC31387.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 1336]
gi|284925789|gb|ADC28141.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747445|gb|ADN90715.1| Flagellar hook-basal body complex protein fliE [Campylobacter
jejuni subsp. jejuni M1]
gi|315057944|gb|ADT72273.1| Flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni S3]
gi|315931720|gb|EFV10675.1| flagellar hook-basal body complex protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 98
Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
N ++ F+ +L++ E E G+ + +A I +AE ++
Sbjct: 17 NKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESSM 76
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K +SA E+++ QI
Sbjct: 77 KFMLEVRNKAISAYKEITRTQI 98
>gi|254292930|ref|YP_003058953.1| flagellar hook-basal body complex subunit FliE [Hirschia baltica
ATCC 49814]
gi|254041461|gb|ACT58256.1| flagellar hook-basal body complex subunit FliE [Hirschia baltica
ATCC 49814]
Length = 104
Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
++S GG S F +L G +AEN +A G + + V + AE TL
Sbjct: 23 ESSQNVGGISGAPFGQILDAAISQTSGAANQAENAIASATMGNADLVDVVTAVAAAEATL 82
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+A+RD+++SA EV +M I
Sbjct: 83 ETVVAVRDQVISAYQEVMRMPI 104
>gi|171321208|ref|ZP_02910178.1| flagellar hook-basal body complex protein FliE [Burkholderia
ambifaria MEX-5]
gi|171093518|gb|EDT38688.1| flagellar hook-basal body complex protein FliE [Burkholderia
ambifaria MEX-5]
Length = 96
Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKIL 97
SF L+ + + AE A G + E V + A L ++ +R +++
Sbjct: 26 SFGTLMMSGMQNLDRTLRAAEAAGTAFALGDERPPHEVVLALEDARLKLQFALNVRTRLV 85
Query: 98 SAVSEVSKMQI 108
E+ +MQ+
Sbjct: 86 EGYQELMRMQL 96
>gi|222824066|ref|YP_002575640.1| flagellar proximal rod protein FliE [Campylobacter lari RM2100]
gi|222539288|gb|ACM64389.1| flagellar proximal rod protein FliE [Campylobacter lari RM2100]
Length = 97
Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
FS+LL++ E AE + G+ + +A I +AE ++ + +R+K ++
Sbjct: 28 FSSLLKNSINNLNKTQETAEAAMVDIATGEVKDLHQAAIAISKAESSMKFMLEVRNKAIN 87
Query: 99 AVSEVSKMQI 108
A E+S+ QI
Sbjct: 88 AYKEISRTQI 97
>gi|327441056|dbj|BAK17421.1| flagellar hook-basal body protein [Solibacillus silvestris StLB046]
Length = 102
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTS 71
IS + + ++ F+ L++ + ++ ++ + G
Sbjct: 6 ISFMSPAQSVNEVNVQNQLTPANAQQQFADTLKEAIASVTEHQKTSDTMTQKLINGGDVD 65
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A TLN +I +R+K + A E+ +M +
Sbjct: 66 LFEVMIAAQKASVTLNTTIEVRNKAVEAYQEIMRMSV 102
>gi|52080222|ref|YP_079013.1| flagellar hook-basal body protein FliE [Bacillus licheniformis ATCC
14580]
gi|52785599|ref|YP_091428.1| flagellar hook-basal body protein FliE [Bacillus licheniformis ATCC
14580]
gi|319645999|ref|ZP_08000229.1| FliE protein [Bacillus sp. BT1B_CT2]
gi|52003433|gb|AAU23375.1| flagellar hook-basal body protein [Bacillus licheniformis ATCC
14580]
gi|52348101|gb|AAU40735.1| FliE [Bacillus licheniformis ATCC 14580]
gi|317391749|gb|EFV72546.1| FliE protein [Bacillus sp. BT1B_CT2]
Length = 105
Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA- 64
+ G + F + G + ++G + +SFS +L+D +++ ++ A
Sbjct: 2 VNGISPFGVQSVQAGTNATNQIKNKQDGSENQVSFSNVLKDSINALNQSQNESDKLTNAL 61
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
AL ++ E + +A TL + R+K + A E+ +MQ+
Sbjct: 62 ALGQDVNLDEVMIAAQKANITLTAATEFRNKAVEAYQEIMRMQM 105
>gi|167465321|ref|ZP_02330410.1| flagellar hook-basal body protein FliE [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 104
Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERT 85
+ + + F + L D ++++ ++G+ T + + + +A
Sbjct: 22 KTNPAGAAQATEKFGSFLLDAIDDLNKQQLSVDDMNQKFVKGEITDIHQLMVASEKASLG 81
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
L L++ +R+K + A ++ ++QI
Sbjct: 82 LELAVQVRNKAIEAYQDIMRIQI 104
>gi|87119488|ref|ZP_01075385.1| flagellar hook-basal body complex protein FliE [Marinomonas sp.
MED121]
gi|86164964|gb|EAQ66232.1| flagellar hook-basal body complex protein FliE [Marinomonas sp.
MED121]
Length = 121
Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
++ Q++ S + Q E G F+ +L+D ++A+++
Sbjct: 13 VLSQMRDMKSQVQQPGVNTPSLSDAQKVEESGDIERADFAQMLKDAVDNVNSLQQEAKSL 72
Query: 62 SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A +G + + + + ++ + +R+K++ A ++ M I
Sbjct: 73 AQAYERGDENVDLPQVMIGLQKSSVSFEAMTQVRNKLVDAYEKIMNMPI 121
>gi|310641542|ref|YP_003946300.1| flagellar hook-basal body complex subunit flie [Paenibacillus
polymyxa SC2]
gi|309246492|gb|ADO56059.1| Flagellar hook-basal body complex subunit FliE [Paenibacillus
polymyxa SC2]
Length = 104
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
F + L+D +S + GK + + + QA +L L+ +R+K +
Sbjct: 35 DFGSFLKDALNEVGQQEAATHQMSDQFMAGKVDVDQVMITSQQALLSLQLTTQVRNKAIE 94
Query: 99 AVSEVSKMQI 108
A E+ + Q+
Sbjct: 95 AYQEIMRTQM 104
>gi|146296279|ref|YP_001180050.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409855|gb|ABP66859.1| flagellar hook-basal body complex subunit FliE
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 102
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM-REAVDHIMQAE 83
F+ E +S SF L +G ++A+ + G TS ++A+ +A
Sbjct: 18 FSDVGKNEKSNSSTSFIDFLYKALEGVDNLQKEADYQNQLFTLGLTSNPQDAIVASEKAS 77
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
L L++ +R+KIL A +E+ +MQ+
Sbjct: 78 MALQLTLQIRNKILDAYNEIMRMQV 102
>gi|187926898|ref|YP_001893243.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12J]
gi|241665227|ref|YP_002983586.1| flagellar hook-basal body protein FliE [Ralstonia pickettii 12D]
gi|187728652|gb|ACD29816.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12J]
gi|240867254|gb|ACS64914.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
12D]
Length = 111
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRD 94
+ F ++L+ +KAE VS + G + + + + +A L ++ +R+
Sbjct: 38 SVDFGSVLKSSLDRVDASQQKAEAVSRSFEMGNNDVDLHDVMLSLQKANIDLQTAVQVRN 97
Query: 95 KILSAVSEVSKMQI 108
K++SA + M I
Sbjct: 98 KLVSAYQNIMSMSI 111
>gi|295399808|ref|ZP_06809789.1| flagellar hook-basal body complex subunit FliE [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111680|ref|YP_003989996.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
Y4.1MC1]
gi|294978211|gb|EFG53808.1| flagellar hook-basal body complex subunit FliE [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216781|gb|ADP75385.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
Y4.1MC1]
Length = 99
Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAER 84
+ + FSA L+D +A+ ++ ++G+ + + + +A
Sbjct: 16 AASQTAKPADVQKEFSAFLKDALNKVNEQQIQADQLTEKLVKGENVDLHQVMIAAQKASI 75
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+L L++ +R+K++ A E+ +MQI
Sbjct: 76 SLQLTLEVRNKVIEAYQEMMRMQI 99
>gi|269796399|ref|YP_003315854.1| flagellar hook-basal body protein [Sanguibacter keddieii DSM 10542]
gi|269098584|gb|ACZ23020.1| flagellar hook-basal body protein [Sanguibacter keddieii DSM 10542]
Length = 114
Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEKAEN 60
IE + + + D G S S F +L EK+
Sbjct: 6 IEGVSLSGAGGVSPTGYLSSPDVIGRPEGASGVSGTSSAFGEVLTGAVGNLQSLQEKSNA 65
Query: 61 VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+++ A+ G + + +A+ TL L+ A+R+K + A SE+ +MQ
Sbjct: 66 LAVRAVTGDLDDIHDYTIASSEAKLTLELTAAVRNKAVEAFSEIMRMQ 113
>gi|237753203|ref|ZP_04583683.1| flagellar hook-basal body complex protein fliE [Helicobacter
winghamensis ATCC BAA-430]
gi|229375470|gb|EEO25561.1| flagellar hook-basal body complex protein fliE [Helicobacter
winghamensis ATCC BAA-430]
Length = 105
Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 20 GMRYDFTQNSNEEG-GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVD 77
D S + SF ++L+D + E G+ + +A
Sbjct: 15 SKLQDVPNLSPNQDLNPPTKSFGSMLKDAVDEVNTYQKTTEQAMADMATGQIKDLHQAAI 74
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
I +AE ++ L + +R+K +SA E+ K QI
Sbjct: 75 VIGKAENSMKLMLEVRNKAISAYKELIKTQI 105
>gi|237653558|ref|YP_002889872.1| flagellar hook-basal body complex subunit FliE [Thauera sp. MZ1T]
gi|237624805|gb|ACR01495.1| flagellar hook-basal body complex subunit FliE [Thauera sp. MZ1T]
Length = 107
Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 7 QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
+G + +S ++ + + ++F+ +L K +A ++
Sbjct: 4 RGIDQMLSELRSVSQAAQGKAAPAADAPAGGVNFADVLNTALKDVSAAQGEARAMAQNFS 63
Query: 67 QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G ++++ + ++ +A + + +R+++++A ++ M +
Sbjct: 64 AGDPNVNLQDVMVNLQKASMSFQQMVQVRNRLVTAYQDIMNMPV 107
>gi|153951288|ref|YP_001398446.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938734|gb|ABS43475.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. doylei 269.97]
Length = 97
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
N ++ F+ +L++ E E G+ + +A I +AE ++
Sbjct: 16 NKSQNSTGIGNEFAKMLKNEIDDFNKAQESGEAAMTDIATGRVKDLHQAAIAITKAESSM 75
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K +SA E+ + QI
Sbjct: 76 KFMLEVRNKAISAYKEIIRTQI 97
>gi|283954186|ref|ZP_06371711.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 414]
gi|283794465|gb|EFC33209.1| flagellar hook-basal body complex protein FliE [Campylobacter
jejuni subsp. jejuni 414]
Length = 98
Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
+ ++ F+ +L++ E E G+ + +A I +AE ++
Sbjct: 17 SKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESSM 76
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K +SA E+++ QI
Sbjct: 77 KFMLEVRNKAISAYKEITRTQI 98
>gi|154173661|ref|YP_001408542.1| flagellar hook-basal body protein FliE [Campylobacter curvus
525.92]
gi|112803041|gb|EAU00385.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
curvus 525.92]
Length = 98
Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
I++ + + + + F+++L D K E A+ G+
Sbjct: 1 MINNIEKLNGVSGSQNSKKIAPATDGSDFASMLNDSLKELNKVQENADKAIADLATGEVK 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +AE ++ L + +R+K LSA E+S+ QI
Sbjct: 61 DLHQAALAIGKAETSMKLMLEIRNKALSAYKEISRTQI 98
>gi|124516312|gb|EAY57820.1| Flagellar hook-basal body complex protein FliE [Leptospirillum
rubarum]
Length = 109
Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI+ S + + + T G S SF +L+D + A+
Sbjct: 1 MIDDSLHARSILPAGELSPAERNDTPGKTTGGESGEASFLHVLKDSMEKVNQMQNAADKT 60
Query: 62 SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + QA+ + L + +RD+I+ A +V M +
Sbjct: 61 IQDFSTGQDGVTLHQTMVAMAQADVSFQLMMQVRDRIVRAYQDVMNMPM 109
>gi|229918626|ref|YP_002887272.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium sp.
AT1b]
gi|229470055|gb|ACQ71827.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium sp.
AT1b]
Length = 93
Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 33/82 (40%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
+ + ++P F + L + + GK + + + ++ +
Sbjct: 12 EVTPSMSKTNPSQFGSYLNEAMNALNETQQATSQARKDLAVGKADLHQVMIQSEESSIAM 71
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L+I +R+K + A E+ +MQ+
Sbjct: 72 QLAIEVRNKAVEAYQEMMRMQV 93
>gi|225850272|ref|YP_002730506.1| flagellar hook-basal body complex protein FliE [Persephonella
marina EX-H1]
gi|225646455|gb|ACO04641.1| flagellar hook-basal body complex protein FliE [Persephonella
marina EX-H1]
Length = 94
Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
FS +L++ D++ A+ G+ ++ + I +++ +L L +R+K L
Sbjct: 25 FSEVLEEFVADVNYDLKVAKEAERKIAAGEVENLENLMYQIAKSDISLRLITEIRNKALE 84
Query: 99 AVSEVSKMQI 108
+ E+ +MQ+
Sbjct: 85 SYQEIMRMQV 94
>gi|308068651|ref|YP_003870256.1| flagellar hook-basal body complex protein fliE [Paenibacillus
polymyxa E681]
gi|305857930|gb|ADM69718.1| Flagellar hook-basal body complex protein fliE [Paenibacillus
polymyxa E681]
Length = 104
Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
F + L+D +S + GK + + + QA +L L+ +R+K +
Sbjct: 35 DFGSFLKDALNEVGQQEAATHQISDQFMAGKVDVDQVMITSQQALLSLQLTTQIRNKAIE 94
Query: 99 AVSEVSKMQI 108
A E+ + Q+
Sbjct: 95 AYQEIMRTQM 104
>gi|91202524|emb|CAJ72163.1| similar to flagellar hook-basal body complex protein FliE
[Candidatus Kuenenia stuttgartiensis]
Length = 99
Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRD 94
SF L I D++ + S+ G ++ E + + +AE + + R+
Sbjct: 27 GASFKDTLGGFINE-INDLQVKASDSIEKFSGGKIENIHEVMVAMSKAEVSFKFMMETRN 85
Query: 95 KILSAVSEVSKMQI 108
K++ EV +MQ+
Sbjct: 86 KLVETYKEVMRMQM 99
>gi|182412249|ref|YP_001817315.1| flagellar hook-basal body complex subunit FliE [Opitutus terrae
PB90-1]
gi|177839463|gb|ACB73715.1| flagellar hook-basal body complex subunit FliE [Opitutus terrae
PB90-1]
Length = 110
Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSP------ISFSALLQDMAKGAIGDMEKAENVS 62
+ + R D S P F LL + + A+ +
Sbjct: 4 VGTISPLQSGLLTRIDAPLPKTALTPSGPLTATPTQGFGQLLDGVVGTVVEKQTIAQEAT 63
Query: 63 LAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L G++ + ++V + +A ++ + +R+K++ + E+ +MQ+
Sbjct: 64 RKVLLGESDQLHQSVIAMQEASVAFSMMVEVRNKLVESYQELMRMQV 110
>gi|149195178|ref|ZP_01872269.1| flagellar hook-basal body protein FliE [Caminibacter mediatlanticus
TB-2]
gi|149134730|gb|EDM23215.1| flagellar hook-basal body protein FliE [Caminibacter mediatlanticus
TB-2]
Length = 98
Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
+ T + ++ ++ ++FS +L+ M+KAE S G+ + +A I +A
Sbjct: 13 NLTSINKQQKNNNELNFSDVLKKELNETNNLMQKAEKASADIASGEVQDLAKASITIQKA 72
Query: 83 ERTLNLSIALRDKILSAVSEVSKMQI 108
E + + + +R+K ++A E+ K QI
Sbjct: 73 EMKMKMMLEVRNKAINAYKELLKTQI 98
>gi|257871288|ref|ZP_05650941.1| predicted protein [Enterococcus gallinarum EG2]
gi|257805452|gb|EEV34274.1| predicted protein [Enterococcus gallinarum EG2]
Length = 107
Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
+ N G+ FS+ L + ++ + G ++ + + +
Sbjct: 19 LGTGAASNETSVAGAKENQFSSYLTHAVDQLNQKTTVMDQDTVNLITGDESDLGNVMIRM 78
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQ 107
+A+ L ++ +R+K L A ++V MQ
Sbjct: 79 TEAQLALQTAVQVRNKCLEAYNDVKNMQ 106
>gi|257866377|ref|ZP_05646030.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257873107|ref|ZP_05652760.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257800335|gb|EEV29363.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257807271|gb|EEV36093.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 107
Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
+ N G+ FS+ L + + ++ + G ++ + + +
Sbjct: 19 LGTGAASNETSAAGAKENQFSSYLTNAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRM 78
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQ 107
+A+ L ++ +R+K L A ++V MQ
Sbjct: 79 TEAQLALQTAVQVRNKCLEAYNDVKNMQ 106
>gi|253573517|ref|ZP_04850860.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251847045|gb|EES75050.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 102
Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 38/95 (40%)
Query: 14 SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
+ N + FS+ L D +G A+ V+ L GK S
Sbjct: 8 DSLKPLTGMQTSGNEQNLTPAQAIKQFSSYLNDALEGVAAQEANAQQVNNQFLLGKVSAD 67
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E + QA +L L+ +R+K++ A E+ + QI
Sbjct: 68 EMMIASEQALLSLQLTTQVRNKVIEAYQEIMRTQI 102
>gi|268680291|ref|YP_003304722.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
deleyianum DSM 6946]
gi|268618322|gb|ACZ12687.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
deleyianum DSM 6946]
Length = 98
Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
+ D + + + + + S FS +LQ+ K + G+
Sbjct: 1 MYNSIDKLSSLTNTSNATLTKTESVGEDFSKILQNSIDEINDTQVKGDRAMADLATGEVK 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +AE ++ L + +R+K LSA E+SK QI
Sbjct: 61 DLHQAAIAINKAETSMKLMLEIRNKALSAYKEISKTQI 98
>gi|117923584|ref|YP_864201.1| flagellar hook-basal body complex subunit FliE [Magnetococcus sp.
MC-1]
gi|117607340|gb|ABK42795.1| flagellar hook-basal body complex subunit FliE [Magnetococcus sp.
MC-1]
Length = 103
Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
+ + I S+ + G SFS LL K +KA + A+ G
Sbjct: 4 AALPQLPNIAQLSKGMSLSSTKAGGPWESFSTLLSQQIKETQQLEKKARVLGEKAMLGNA 63
Query: 71 --SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ EA AE + L + R+K + EV M +
Sbjct: 64 GVSLHEAQIAGATAELHMQLLVQTRNKAVEVYKEVMNMPV 103
>gi|95929848|ref|ZP_01312589.1| flagellar hook-basal body complex protein (FliE) [Desulfuromonas
acetoxidans DSM 684]
gi|95134144|gb|EAT15802.1| flagellar hook-basal body complex protein (FliE) [Desulfuromonas
acetoxidans DSM 684]
Length = 97
Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKIL 97
F+ +L + A++ + GK + E + + +A+ ++ + + +R+K++
Sbjct: 27 GFADMLTEAIDQTNKAQLDADSAVTDLVTGKADNLHEVMLSMEEADVSMRMLVQIRNKVV 86
Query: 98 SAVSEVSKMQI 108
A E+ +MQ+
Sbjct: 87 DAYKEIIQMQV 97
>gi|325497679|gb|EGC95538.1| flagellar hook-basal body complex protein [Escherichia fergusonii
ECD227]
Length = 114
Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M + + ISF+ L A
Sbjct: 9 MNMSAIQGIQGVISQLQATAMSARAQEPMPQP----TISFAGQLHAALDRISDTQNTARV 64
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 65 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|83646782|ref|YP_435217.1| flagellar hook-basal body complex protein FliE [Hahella chejuensis
KCTC 2396]
gi|83634825|gb|ABC30792.1| flagellar hook-basal body complex protein (FliE) [Hahella
chejuensis KCTC 2396]
Length = 98
Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
+ +S +SF+ L + A++ + G+ ++ + + + +A+ +++L
Sbjct: 20 KSAKASGVSFADWLGGEVNQVNQQLAAADSAARTLATGEAENLHQVMIALDKAQLSMSLM 79
Query: 90 IALRDKILSAVSEVSKMQI 108
+ +R+++L + EV +M I
Sbjct: 80 VEVRNRLLESYQEVMRMSI 98
>gi|301029393|ref|ZP_07192487.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
196-1]
gi|299877697|gb|EFI85908.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
196-1]
Length = 114
Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS T M ++ + ISF+ L A
Sbjct: 9 MKMSAIQGIEGVISQLQTTAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAART 64
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 65 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|51246507|ref|YP_066391.1| flagellar hook-basal body complex protein (FliE) [Desulfotalea
psychrophila LSv54]
gi|50877544|emb|CAG37384.1| related to flagellar hook-basal body complex protein (FliE)
[Desulfotalea psychrophila LSv54]
Length = 98
Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
I + T + + + +F+ ++ + A + + A GK
Sbjct: 1 MIPEIRAQQVALAATDSMPQNISKAGRTFAEVIAETVNQANKAQDVGDKSIQALESGKAQ 60
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ E + + +A+ +L + + +R+K LSA E+ +MQ+
Sbjct: 61 NLHEVMISMEEADISLRMLVQVRNKALSAYDEIMRMQV 98
>gi|187934886|ref|YP_001885040.1| flagellar hook-basal body complex protein [Clostridium botulinum B
str. Eklund 17B]
gi|187723039|gb|ACD24260.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum B str. Eklund 17B]
Length = 108
Score = 40.1 bits (92), Expect = 0.093, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDK 95
+SF L++ +A+ + A ++G ++ E + +A L + RD
Sbjct: 36 SVSFGETLKNCIDDVNTKQVQADTYTNAFVKGDDVNIDEVMIKGEEASLALQFLVKTRDN 95
Query: 96 ILSAVSEVSKMQI 108
++ + E+ KMQ+
Sbjct: 96 LVESYKELIKMQL 108
>gi|114330761|ref|YP_746983.1| flagellar hook-basal body protein FliE [Nitrosomonas eutropha C91]
gi|122314295|sp|Q0AI14|FLIE_NITEC RecName: Full=Flagellar hook-basal body complex protein FliE
gi|114307775|gb|ABI59018.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas
eutropha C91]
Length = 109
Score = 40.1 bits (92), Expect = 0.094, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM--REA 75
T + + + +S F LL+ + A +S ++G + +
Sbjct: 17 TSDLAAGGNKPAAVAPAASQADFGQLLKSAVDQVNTVQQTANQLSQEFVRGNQDVELHDV 76
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A + I +R+++++A E+ MQ+
Sbjct: 77 MISLQKANVSFQSMIQVRNRLVTAYQEIMNMQV 109
>gi|118474123|ref|YP_891879.1| flagellar hook-basal body protein FliE [Campylobacter fetus subsp.
fetus 82-40]
gi|118413349|gb|ABK81769.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
fetus subsp. fetus 82-40]
Length = 95
Score = 40.1 bits (92), Expect = 0.094, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
T ++ + FS +L EKA+ G+ + +A I +AE
Sbjct: 12 TTEQTKQKDGAGSGFSDMLNKALSDLNDVQEKADKAVADLATGEVKDLHQAAIAIGKAET 71
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
++ L + +R+K ++A E+S+ Q+
Sbjct: 72 SMKLMLEVRNKAINAYKEISRTQL 95
>gi|317179759|dbj|BAJ57547.1| flagellar hook-basal body protein FliE [Helicobacter pylori F30]
Length = 109
Score = 40.1 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSS-----PISFSALLQDMAKGAIGDMEKAEN 60
+Q ++ S + EE GS+ FS LL+ E+++
Sbjct: 1 MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDK 60
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ + +A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 61 ALADMVTGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|319790421|ref|YP_004152054.1| flagellar hook-basal body complex subunit FliE [Thermovibrio
ammonificans HB-1]
gi|317114923|gb|ADU97413.1| flagellar hook-basal body complex subunit FliE [Thermovibrio
ammonificans HB-1]
Length = 94
Score = 40.1 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
F LL + D KA V A +G+ ++ EAV I +A+ +L L + LR
Sbjct: 20 QESSGFEELLTNFIASVNADQLKAREVEKALSRGEVKNLEEAVLTIEKADLSLRLLVELR 79
Query: 94 DKILSAVSEVSKMQI 108
+K L + E+ +MQ+
Sbjct: 80 NKALESYQEIMRMQV 94
>gi|299534788|ref|ZP_07048118.1| flagellar hook-basal body complex protein [Lysinibacillus
fusiformis ZC1]
gi|298729876|gb|EFI70421.1| flagellar hook-basal body complex protein [Lysinibacillus
fusiformis ZC1]
Length = 101
Score = 40.1 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
+ SF+ L++ ++ + ++G+ + E + +A TLN +I +R+
Sbjct: 28 AQQSFANSLKEAIAKVNDQQITSDKFTQKLIKGEDVELHEVMIASQKASITLNATIEVRN 87
Query: 95 KILSAVSEVSKMQI 108
K++ A E+ +M +
Sbjct: 88 KVIEAYQEIMRMSV 101
>gi|309779485|ref|ZP_07674246.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
5_7_47FAA]
gi|308921726|gb|EFP67362.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
5_7_47FAA]
Length = 113
Score = 40.1 bits (92), Expect = 0.098, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRD 94
+ F A+L+ +KAE++S + G + + + + +A + ++ +R+
Sbjct: 40 SVDFGAVLKSSLDRVDASQQKAESISRSFEMGNNDVDLHDVMLSLQKANIDMQTAVQVRN 99
Query: 95 KILSAVSEVSKMQI 108
K +SA + M I
Sbjct: 100 KFVSAYQSIMSMSI 113
>gi|257875990|ref|ZP_05655643.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810156|gb|EEV38976.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 107
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
+ N G+ FS+ L + ++ + G ++ + + +
Sbjct: 19 LGTGAASNETSAAGAKENQFSSYLTHAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRM 78
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQ 107
+A+ L ++ +R+K L A ++V MQ
Sbjct: 79 TEAQLALQTAVQVRNKCLEAYNDVKNMQ 106
>gi|311068141|ref|YP_003973064.1| flagellar hook-basal body protein FliE [Bacillus atrophaeus 1942]
gi|310868658|gb|ADP32133.1| flagellar hook-basal body protein FliE [Bacillus atrophaeus 1942]
Length = 106
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TS 71
+ +T + NS + S+ SFS LL++ +++N + A GK +
Sbjct: 10 VQNTQSTQPVTSQINNSQKTDSSNQTSFSELLKNSISSLNESQVQSDNFTNALAAGKDVN 69
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A +L + R+K + A E+ +MQ+
Sbjct: 70 LDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 106
>gi|163789651|ref|ZP_02184089.1| hypothetical protein CAT7_09415 [Carnobacterium sp. AT7]
gi|159875183|gb|EDP69249.1| hypothetical protein CAT7_09415 [Carnobacterium sp. AT7]
Length = 106
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 10 NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
NS +S G+ + S E S SFS +L++ A+ + G
Sbjct: 8 NSLVSGPTQTGVTGGLKEQSAEAATGSA-SFSNMLENAMGSLNDQQVAADQGVQGLITGN 66
Query: 70 TS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
T + + +A+ +L L++ LR+K L A +E+ MQ
Sbjct: 67 TDNLHSVMIQTSEAQLSLELALQLRNKGLEAYNEIKNMQ 105
>gi|238924171|ref|YP_002937687.1| hypothetical protein EUBREC_1809 [Eubacterium rectale ATCC 33656]
gi|238875846|gb|ACR75553.1| Hypothetical protein EUBREC_1809 [Eubacterium rectale ATCC 33656]
gi|291524900|emb|CBK90487.1| flagellar hook-basal body complex protein FliE [Eubacterium rectale
DSM 17629]
gi|291529041|emb|CBK94627.1| flagellar hook-basal body complex protein FliE [Eubacterium rectale
M104/1]
Length = 104
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD---MEKAENVSLAALQGKTS-MR 73
+ G F N++ SFS +L AE + G++
Sbjct: 10 STGDIKSFFNNTSLTKTDKTDSFSDVLSAAMGSIGETNDLQNAAEQEEVRFALGESDNTH 69
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A L ++A+RDKI+ A E+ +M I
Sbjct: 70 DLLVAETKAAVALQYTVAVRDKIIDAYKELMQMSI 104
>gi|320529386|ref|ZP_08030474.1| flagellar hook-basal body complex protein FliE [Selenomonas
artemidis F0399]
gi|320138352|gb|EFW30246.1| flagellar hook-basal body complex protein FliE [Selenomonas
artemidis F0399]
Length = 100
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I+ +Q T + T +G D + SF L+D +E+
Sbjct: 1 MEIQALQMTPVTMRATSHLGETVDRAETK---------SFGTYLKDALSEVNRLQLDSEH 51
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + + V +AE L L++ LR++ +SA E+ +MQ+
Sbjct: 52 QDALLAAGEVQDVSQVVVAGQKAEIALQLTLQLRNRAVSAYQEIMRMQV 100
>gi|261885798|ref|ZP_06009837.1| flagellar hook-basal body protein FliE [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 95
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
T ++ + FS +L EKA+ G+ + +A I +AE
Sbjct: 12 TTEQTKQKDGAGSGFSDMLNKALSDLNDVQEKADKAVADLATGEVKDLHQAAIAIGKAET 71
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
++ L + +R+K ++A E+S+ Q+
Sbjct: 72 SMRLMLEVRNKAINAYKEISRTQL 95
>gi|269792947|ref|YP_003317851.1| flagellar hook-basal body complex subunit FliE [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100582|gb|ACZ19569.1| flagellar hook-basal body complex subunit FliE [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 100
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
S F +L+ + A+ + G+ + + + +AE L + +R
Sbjct: 26 GSVTPFEEVLRSSLRSVNSLQMGADQIVQRLALGEVEDVSQVSIAVEKAELALRTLVEIR 85
Query: 94 DKILSAVSEVSKMQI 108
+K++ A ++S+M +
Sbjct: 86 NKLVDAYQQISRMPV 100
>gi|325288777|ref|YP_004264958.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
glycolicus DSM 8271]
gi|324964178|gb|ADY54957.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
glycolicus DSM 8271]
Length = 107
Score = 40.1 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA-VDHIMQAERTLNLSIALR 93
+ FSA LQ+ +A G S V + +A +L+L++ +R
Sbjct: 33 GNSSDFSAFLQNAVDNLEQTQSEASVAVEGLTTGAISDFHVPVIALQKAALSLDLTVNVR 92
Query: 94 DKILSAVSEVSKMQI 108
+KIL A E+ +MQI
Sbjct: 93 NKILDAYHEIMRMQI 107
>gi|304316909|ref|YP_003852054.1| flagellar hook-basal body complex subunit FliE
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778411|gb|ADL68970.1| flagellar hook-basal body complex subunit FliE
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 95
Score = 40.1 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREA 75
+ I S ++ SF +L+ K++ + G +
Sbjct: 3 NPISQINSMGSISASSTTNNSTSFGDILKTAIADVNNLQLKSQQDDQMLVTGDINDIHNV 62
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A+ L L+I +++KIL+A E+ +M +
Sbjct: 63 MIDATKADIALELTIQIKNKILAAYQEIMRMPV 95
>gi|94264092|ref|ZP_01287891.1| Flagellar hook-basal body complex protein FliE [delta
proteobacterium MLMS-1]
gi|93455508|gb|EAT05698.1| Flagellar hook-basal body complex protein FliE [delta
proteobacterium MLMS-1]
Length = 101
Score = 40.1 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAER 84
F +L + +A+ +S + G+ ++ E + + +A
Sbjct: 18 GSQQPVPANDVISGFGEVLGRAVDSVNQNQAEADYLSEGLVSGQHANIHETMIAVEKANI 77
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ L ++ K L A E+ +MQ+
Sbjct: 78 SFKLMSKVQQKGLDAYQEIMRMQL 101
>gi|119899003|ref|YP_934216.1| flagellar hook-basal body complex protein FliE [Azoarcus sp. BH72]
gi|119671416|emb|CAL95329.1| flagellar hook-basal body complex protein FliE [Azoarcus sp. BH72]
Length = 98
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+ + G+ + F+ +LQ ++A +++ G ++++ + ++ +A
Sbjct: 15 KPAQNTQGAEGVDFAQVLQTAMADVSAAQKEARSMAQDFSAGDPNVNLQDVMVNLQKANL 74
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ + +R+++++A ++ M +
Sbjct: 75 SFQQMVQVRNRLVTAYQDIMNMPV 98
>gi|304312786|ref|YP_003812384.1| Flagellar hook-basal body complex protein [gamma proteobacterium
HdN1]
gi|301798519|emb|CBL46749.1| Flagellar hook-basal body complex protein [gamma proteobacterium
HdN1]
Length = 115
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 7 QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS---FSALLQDMAKGAIGDMEKAENVSL 63
Q GM G S P+ F +++D + ++ +
Sbjct: 9 QVLAQMRQLRQAAGMDRKAELLPPGFGASQPVDRPGFGNVMKDALTKVNELQKTSDAMKT 68
Query: 64 AALQ--GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ G T + + +A ++ +R+K++ A E+ M +
Sbjct: 69 EYIRTDGATDITRVMVASQKASIAFQATVQVRNKMVEAYKEIMNMPV 115
>gi|289548425|ref|YP_003473413.1| flagellar hook-basal body complex subunit FliE [Thermocrinis albus
DSM 14484]
gi|289182042|gb|ADC89286.1| flagellar hook-basal body complex subunit FliE [Thermocrinis albus
DSM 14484]
Length = 92
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDK 95
F L+ + ++A NV A L+G+ + V + +A L+L + +R+K
Sbjct: 20 TSDFFEELKRIVLWVNQQRQEANNVREAFLKGEDVPLHRLVIEMEKASLALSLLVQIRNK 79
Query: 96 ILSAVSEVSKMQI 108
++ A E+++MQ+
Sbjct: 80 LVEAFQELNRMQV 92
>gi|167040331|ref|YP_001663316.1| flagellar hook-basal body protein FliE [Thermoanaerobacter sp.
X514]
gi|300914415|ref|ZP_07131731.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
sp. X561]
gi|307724349|ref|YP_003904100.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
sp. X513]
gi|166854571|gb|ABY92980.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
sp. X514]
gi|300889350|gb|EFK84496.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
sp. X561]
gi|307581410|gb|ADN54809.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
sp. X513]
Length = 98
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 12 FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
++ + + + S +FS L++ A + G+
Sbjct: 1 MVNQITPVNPVTLDSTLEATQNSSKIDTFSDFLKEAFNKVNDLQLTAMKNDQKLVTGEID 60
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ L L+I +++K+L A E+ +M +
Sbjct: 61 DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98
>gi|91776331|ref|YP_546087.1| flagellar hook-basal body protein FliE [Methylobacillus flagellatus
KT]
gi|91710318|gb|ABE50246.1| flagellar hook-basal body complex protein (FliE) [Methylobacillus
flagellatus KT]
Length = 121
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 14 SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTS 71
TDT + + S+ + F+ +L+ KAE + + G K S
Sbjct: 25 PATDTAMHGISGNSPAQKPQASNRVDFADVLKSSISQVNQAQVKAEELGQSFAMGDDKVS 84
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A +L +I +R++++SA ++ MQ+
Sbjct: 85 LSDVMVAGQKANISLQATIQVRNRLVSAYQDIMNMQV 121
>gi|301168114|emb|CBW27700.1| flagellar hook-basal body complex protein fliE [Bacteriovorax
marinus SJ]
Length = 121
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLS 89
EG + SF +L + +++ N ++ L K ++ E + + +A+
Sbjct: 44 EGTQAKQSFGEMLASSIAQ-VNGLQQEANTAMQKLASGEKKNLPEVMMAVEKADIAFRTM 102
Query: 90 IALRDKILSAVSEVSKMQI 108
+R K++ A EV +MQI
Sbjct: 103 NQIRTKVIDAYKEVMRMQI 121
>gi|322382304|ref|ZP_08056211.1| flagellar hook-basal body protein FliE-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153657|gb|EFX46032.1| flagellar hook-basal body protein FliE-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 92
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERT 85
+ + + F + L D ++++ ++G+ T + + + +A
Sbjct: 10 KTNPAGAAQATEKFGSFLLDAIDDLNKQQLSVDDMNQKFVKGEITDIHQLMVASEKASLG 69
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
L L++ +R+K + A ++ ++QI
Sbjct: 70 LELAVQVRNKAIEAYQDIMRIQI 92
>gi|193071139|ref|ZP_03052063.1| flagellar hook-basal body complex protein [Escherichia coli
E110019]
gi|192955534|gb|EDV86013.1| flagellar hook-basal body complex protein [Escherichia coli
E110019]
Length = 114
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M ++ + ISF+ L A
Sbjct: 9 MKMSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAART 64
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 65 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|148266224|ref|YP_001232930.1| flagellar hook-basal body complex subunit FliE [Geobacter
uraniireducens Rf4]
gi|146399724|gb|ABQ28357.1| flagellar hook-basal body complex subunit FliE [Geobacter
uraniireducens Rf4]
Length = 102
Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
+ + + + FS L +M A+ + G++ + E +
Sbjct: 11 GVERAFPSPIAKETKVAAPAEDFSKYLGEMVGKVNEMQVTADKSIQSLAVGESKGLHEVM 70
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A + +R+K + A EV +M +
Sbjct: 71 LAVEKASISFQFLSQVRNKAVEAYQEVMRMPV 102
>gi|332674369|gb|AEE71186.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
83]
Length = 109
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
TD+ R + E+ G FS LL+ E+++ G+ + +
Sbjct: 19 TDSRTKREESGSTFKEQKGGE---FSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQ 75
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 76 AAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|221309495|ref|ZP_03591342.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313820|ref|ZP_03595625.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318744|ref|ZP_03600038.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323015|ref|ZP_03604309.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296330834|ref|ZP_06873309.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674352|ref|YP_003866024.1| flagellar basal body protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|321315386|ref|YP_004207673.1| flagellar hook-basal body protein FliE [Bacillus subtilis BSn5]
gi|296151839|gb|EFG92713.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412596|gb|ADM37715.1| flagellar basal body protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|320021660|gb|ADV96646.1| flagellar hook-basal body protein FliE [Bacillus subtilis BSn5]
Length = 108
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TS 71
+ +T + NS + S+ SFS LL++ ++N++ A GK +
Sbjct: 12 VQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNESQVASDNMTNALAAGKDVN 71
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A +L + R+K + A E+ +MQ+
Sbjct: 72 LDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 108
>gi|301018214|ref|ZP_07182729.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
69-1]
gi|300399801|gb|EFJ83339.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
69-1]
Length = 106
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS T M ++ + ISF+ L A
Sbjct: 1 MKMSAIQGIEGVISQLQTTAMSARALESLPQP----TISFAGQLHAALDRISDTQTAART 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|313895965|ref|ZP_07829519.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312975390|gb|EFR40851.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 100
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I+ +Q T + T +G D + SF L+D +E+
Sbjct: 1 MEIQALQMTPVTMRATSHLGETVDRAETK---------SFGTYLKDALSEVNRLQLDSEH 51
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + + + +AE L L++ LR++ +SA E+ +MQ+
Sbjct: 52 QDALLAAGEVQDVSQVIVAGQKAEIALQLTLQLRNRAVSAYQEIMRMQV 100
>gi|261407985|ref|YP_003244226.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
Y412MC10]
gi|329929283|ref|ZP_08283036.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
HGF5]
gi|261284448|gb|ACX66419.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
Y412MC10]
gi|328936652|gb|EGG33095.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
HGF5]
Length = 102
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
+ Q N S I F + L + + A +S + G+ ++
Sbjct: 8 SVQGVQPLQMQEQVKNGATPSESIRDFGSYLNEALNSVAAQEQNAHVMSDKLMIGQVNVD 67
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ QA ++ L+ +R+K++ A E+ + QI
Sbjct: 68 QAMISAQQALLSIQLTTQVRNKVVEAYQEIMRTQI 102
>gi|325567532|ref|ZP_08144199.1| flagellar hook-basal body complex protein FliE [Enterococcus
casseliflavus ATCC 12755]
gi|325158965|gb|EGC71111.1| flagellar hook-basal body complex protein FliE [Enterococcus
casseliflavus ATCC 12755]
Length = 107
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
+ N G+ FS+ L + + ++ + G ++ + + +
Sbjct: 19 LGTGAASNETSVVGTKENQFSSYLTNAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRM 78
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQ 107
+A+ L ++ +R+K L A ++V MQ
Sbjct: 79 TEAQLALQTAVQVRNKCLEAYNDVKNMQ 106
>gi|116619480|ref|YP_821636.1| flagellar hook-basal body complex subunit FliE [Candidatus
Solibacter usitatus Ellin6076]
gi|116222642|gb|ABJ81351.1| flagellar hook-basal body complex subunit FliE [Candidatus
Solibacter usitatus Ellin6076]
Length = 98
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNL 88
SS +F +L + + A L G+ + + QAE ++ L
Sbjct: 19 PAGQPSSGGAFQDVLSGAIQRVESFSQNASTSVERFLSGENEEIHTTILATQQAELSMEL 78
Query: 89 SIALRDKILSAVSEVSKMQI 108
+ R+K++SA E+ +M +
Sbjct: 79 FMQARNKVVSAYQEIMRMPM 98
>gi|256078044|ref|XP_002575308.1| hypothetical protein [Schistosoma mansoni]
gi|238660543|emb|CAZ31541.1| expressed protein [Schistosoma mansoni]
Length = 1522
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 4 EQIQGTNSFISHTDTIGMRYDFTQNSNE---EGGSSPISF--------SALLQDMAKGAI 52
E + N+FI T+ + + DF + ++ + LL+ +
Sbjct: 1109 EAMLRLNAFIKSTE-LLLVSDFVLPETTDLDQAHAATADYRQQLEEARKQLLEKARTDYL 1167
Query: 53 GDMEKAENVSLAALQGKTSMREAVDHIMQAERT 85
++ AE + AA G+ M +A + +M A R
Sbjct: 1168 EALKTAEELMTAAKAGQADMEQA-EAVMAAVRA 1199
>gi|224373712|ref|YP_002608084.1| flagellar hook-basal body complex protein (FliE) [Nautilia
profundicola AmH]
gi|223588538|gb|ACM92274.1| flagellar hook-basal body complex protein (FliE) [Nautilia
profundicola AmH]
Length = 96
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 11 SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
+FI+ + + N N+ G SF LL+ M+ AE GK
Sbjct: 2 AFINKVENTNNIGNVVNNKNKADG----SFEDLLKKELDTTNNMMQNAEKAEADIATGKV 57
Query: 71 -SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +AE + + + +R+K ++A E+ K QI
Sbjct: 58 EDLAKASITIQKAEMQMKMVLEVRNKAINAYKELLKTQI 96
>gi|119715007|ref|YP_921972.1| flagellar hook-basal body complex subunit FliE [Nocardioides sp.
JS614]
gi|226704236|sp|A1SEQ0|FLIE_NOCSJ RecName: Full=Flagellar hook-basal body complex protein FliE
gi|119535668|gb|ABL80285.1| flagellar hook-basal body complex subunit FliE [Nocardioides sp.
JS614]
Length = 105
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + I+G F + D + S++ G + F ++ D +K++
Sbjct: 1 MSVNGIEGIG-FTPYVAPQLNPTDPVRGSSQAGAA----FGDMVIDGLDRLEAVQDKSDR 55
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+++ A G + + +A T L++A+R++ L A +E+ +M I
Sbjct: 56 LAVQAATGDLNDIHDYTIAATEASVTTQLTVAVRNRALEAFNEIMRMPI 104
>gi|42524764|ref|NP_970144.1| hypothetical protein Bd3405 [Bdellovibrio bacteriovorus HD100]
gi|39576974|emb|CAE78203.1| fliE [Bdellovibrio bacteriovorus HD100]
Length = 111
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKIL 97
SF+ L+D + ++ GKT + + + +A+ L + + +R+KI+
Sbjct: 41 SFADTLKDAVGSVNEMQKASDKAMQNLATGKTDNVADVMIAAEKADIALKVMVQVRNKII 100
Query: 98 SAVSEVSKMQI 108
A EV KMQ+
Sbjct: 101 DAYQEVMKMQV 111
>gi|268589959|ref|ZP_06124180.1| flagellar hook-basal body complex protein FliE [Providencia
rettgeri DSM 1131]
gi|291314676|gb|EFE55129.1| flagellar hook-basal body complex protein FliE [Providencia
rettgeri DSM 1131]
Length = 103
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALL----QDMAKGAIGDMEKAEN 60
+Q IS + + + + + P+ F+ L + K ++ EN
Sbjct: 2 TVQAIEGVISQLNVVATQA----TNPIKPVIEPVGFADHLVASVNQINKTRNDSAKQVEN 57
Query: 61 VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+L + S+ + + + +A +L + I +R+K+++A E+ M +
Sbjct: 58 FTLG--KQDISLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEIMSMPV 103
>gi|221636058|ref|YP_002523934.1| flagellar hook-basal body complex protein FliE [Thermomicrobium
roseum DSM 5159]
gi|221157476|gb|ACM06594.1| flagellar hook-basal body complex protein FliE [Thermomicrobium
roseum DSM 5159]
Length = 99
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKIL 97
SF A+L+ + +A+ ++LA G+ + E + + A L ++ +R++ L
Sbjct: 29 SFGAVLERALGSLNQQINEADRLALALAAGEDVDLHEVMLALETASIGLQAALQIRNRAL 88
Query: 98 SAVSEVSKMQI 108
A EV M I
Sbjct: 89 EAYREVMSMPI 99
>gi|89098645|ref|ZP_01171527.1| flagellar hook-basal body protein [Bacillus sp. NRRL B-14911]
gi|89086607|gb|EAR65726.1| flagellar hook-basal body protein [Bacillus sp. NRRL B-14911]
Length = 103
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 14 SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSM 72
S +I T + SF+++L+ +++ ++ +G+ +
Sbjct: 8 SPVSSIMQPAKITGTAAGSAAEGHKSFASMLKQSIDNVNSSQLQSDVMTEKLARGEDIGL 67
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E + +A T+ ++ +R+K++ A E +MQ+
Sbjct: 68 HEVMIASQKASITMQAALEVRNKVIEAYQETMRMQV 103
>gi|114566384|ref|YP_753538.1| flagellar hook-basal body protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337319|gb|ABI68167.1| flagellar hook-basal body protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 102
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA--ALQGKT 70
+ G+ + + F L++ + + +++K S AL +T
Sbjct: 6 LDSIALAGINPGQPSVMKDSPANKEGGFFNYLKEALQE-VDELQKEAASSAEKLALGDET 64
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A L L++ +R+K++ A E+ +MQ+
Sbjct: 65 YLHNTILAYEKANLALQLTVEVRNKLVEAYQELMRMQM 102
>gi|172057889|ref|YP_001814349.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium
sibiricum 255-15]
gi|171990410|gb|ACB61332.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium
sibiricum 255-15]
Length = 95
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
S ++P FS +L G + + + GKT + + +A
Sbjct: 12 VLPSQSVAKTTPSDFSEVLSQAMNGLNDAQQASSQARVDLATGKTTDLHNIMIKTEEASL 71
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
++ L+I +R+K + A E+ +MQ+
Sbjct: 72 SMQLAIEVRNKGIEAYQEMMRMQL 95
>gi|224826634|ref|ZP_03699735.1| flagellar hook-basal body complex subunit FliE [Lutiella
nitroferrum 2002]
gi|224601235|gb|EEG07417.1| flagellar hook-basal body complex subunit FliE [Lutiella
nitroferrum 2002]
Length = 105
Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLN 87
+ +S + F+ +L+ + + ++ + G+ ++++ + + +A +
Sbjct: 25 PQPQETSQVDFADVLKSTIEQVNSAQQTSQEMQKQFELGEEGVNLQDVMVSLQKASLSFQ 84
Query: 88 LSIALRDKILSAVSEVSKMQI 108
+ R+K++SA E+ QI
Sbjct: 85 TMVQARNKLVSAYQEIMNTQI 105
>gi|16078683|ref|NP_389502.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
subtilis str. 168]
gi|120321|sp|P24502|FLIE_BACSU RecName: Full=Flagellar hook-basal body complex protein FliE
gi|142917|gb|AAA22443.1| fliE [Bacillus subtilis]
gi|2633992|emb|CAB13493.1| flagellar basal body protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291484171|dbj|BAI85246.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
natto BEST195]
Length = 106
Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TS 71
+ +T + NS + S+ SFS LL++ ++N++ A GK +
Sbjct: 10 VQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNESQVASDNMTNALAAGKDVN 69
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + +A +L + R+K + A E+ +MQ+
Sbjct: 70 LDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 106
>gi|320354316|ref|YP_004195655.1| flagellar hook-basal body complex subunit FliE [Desulfobulbus
propionicus DSM 2032]
gi|320122818|gb|ADW18364.1| flagellar hook-basal body complex subunit FliE [Desulfobulbus
propionicus DSM 2032]
Length = 97
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 17 DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREA 75
+ + + SF +L+ M + A+ G + ++ EA
Sbjct: 5 QAVTPSLTPALPARSAVAQAETSFGDMLKTMVAQTNEQQQNADQALQQVHAGGEKNLHEA 64
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A+ +L + +R+K +SA E+ +MQ+
Sbjct: 65 MIALEKADVSLRYMVQVRNKAISAYQEIMQMQV 97
>gi|288573031|ref|ZP_06391388.1| flagellar hook-basal body complex subunit FliE [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568772|gb|EFC90329.1| flagellar hook-basal body complex subunit FliE [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 101
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTS-MREAVDHIMQAERTL 86
+ E + SF L++ G + +++ N + L G + E + +A
Sbjct: 21 KSPEVAAPARSFEDSLKEAVVG-VNELQMDSNAMVQRLSLGDVDDVSEVTLSVEKASLAF 79
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L + +RDK++ A ++S+M +
Sbjct: 80 QLLVRVRDKLVDAYQQLSRMAV 101
>gi|188590322|ref|YP_001920201.1| flagellar hook-basal body complex protein [Clostridium botulinum E3
str. Alaska E43]
gi|188500603|gb|ACD53739.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum E3 str. Alaska E43]
Length = 108
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
+ +SF L+ +A++ + A ++G ++ E + +A L + RD
Sbjct: 35 NNVSFGETLKGCIDEINTKQVQADSYTNAFVKGDDVNIDEVMIKGEEASLALQFLVKTRD 94
Query: 95 KILSAVSEVSKMQI 108
++ + E+ KMQ+
Sbjct: 95 NLVESYKELIKMQL 108
>gi|300854207|ref|YP_003779191.1| flagellar hook-basal body complex protein FliE [Clostridium
ljungdahlii DSM 13528]
gi|300434322|gb|ADK14089.1| flagellar hook-basal body complex protein FliE [Clostridium
ljungdahlii DSM 13528]
Length = 112
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGS---------SPISFSALLQDMAKGAIGDMEKAE 59
N F T TQ+ N S + SFS+LLQ+ +A
Sbjct: 3 INEFTPDTTVFDKISGNTQSQNVSNASKDNIVNNEDAVSSFSSLLQNKLDEVNNQQIQAN 62
Query: 60 NVSLAALQGKTSMREAVDHIMQAER---TLNLSIALRDKILSAVSEVSKMQI 108
N + G + + ++ AE+ +L L++ +R+K + A E+++ Q+
Sbjct: 63 NSINEFVSG--DRNDVANVMLDAEQAKMSLELAVQIRNKFVEAYQEINRTQL 112
>gi|292489163|ref|YP_003532050.1| flagellar hook-basal body complex protein FliE [Erwinia amylovora
CFBP1430]
gi|292900281|ref|YP_003539650.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
49946]
gi|291200129|emb|CBJ47255.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
49946]
gi|291554597|emb|CBA22240.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
CFBP1430]
gi|312173322|emb|CBX81577.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
ATCC BAA-2158]
Length = 110
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
S I +F N S +FS L + + A+ S + + G
Sbjct: 9 IGQMHSQAQKISAPDEFLSNGKLTSLGSGPNFSDALFNSINEINKSQQTAKAQSQSWMSG 68
Query: 69 KTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ + + + + ++ + + LR+K+LSA EV M
Sbjct: 69 NSDIGLNDVMLSLQKSSVAFSFGVQLRNKMLSAYQEVMNMP 109
>gi|296124188|ref|YP_003631966.1| flagellar hook-basal body complex subunit FliE [Planctomyces
limnophilus DSM 3776]
gi|296016528|gb|ADG69767.1| flagellar hook-basal body complex subunit FliE [Planctomyces
limnophilus DSM 3776]
Length = 111
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIM 80
+ +SF+ LL G ++ + +L G SM E
Sbjct: 24 SQPLALPESVPNTQPTVSFADLLSQSLDATNGQQQQMHSQIAGSLTGSDLSMVETFSAAR 83
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ L L++ +R+K++ A E+ MQ+
Sbjct: 84 EADLALKLTLQIRNKLIEAYREIQNMQL 111
>gi|251781161|ref|ZP_04824081.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243085476|gb|EES51366.1| flagellar hook-basal body complex protein FliE [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 108
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
+ ISF L+ +A++ + A ++G ++ E + +A L + RD
Sbjct: 35 NNISFGETLKGCIDEINTKQVQADSYTNAFVKGDDVNIDEVMIKGEEASLALQFLVKTRD 94
Query: 95 KILSAVSEVSKMQI 108
++ + E+ KMQ+
Sbjct: 95 NLVESYKELIKMQL 108
>gi|292669733|ref|ZP_06603159.1| flagellar hook-basal body complex protein FliE [Selenomonas noxia
ATCC 43541]
gi|292648530|gb|EFF66502.1| flagellar hook-basal body complex protein FliE [Selenomonas noxia
ATCC 43541]
Length = 102
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIG-DMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKIL 97
SF L+D + E L A + + + V +AE L L++ LR++ +
Sbjct: 32 SFGTYLKDALSEVNQLQLASDEQNKLLAAGEVSDISQVVVAGQKAEIALQLTLQLRNRAV 91
Query: 98 SAVSEVSKMQI 108
SA E+ +MQ+
Sbjct: 92 SAYQEIMRMQV 102
>gi|331673451|ref|ZP_08374219.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA280]
gi|331069649|gb|EGI41036.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA280]
Length = 106
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M ++ ISF+ L A
Sbjct: 1 MKMSAIQGIEGVISQLQATAMNARAQESLPHP----TISFAGQLHAALDRISDTQTAART 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|206603155|gb|EDZ39635.1| Flagellar hook-basal body complex protein FliE [Leptospirillum sp.
Group II '5-way CG']
Length = 109
Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
MI+ S + + + T G S SF +L+D + A+
Sbjct: 1 MIDDSLHARSILPAGELSPAEKNDTTGKQVGGESGEASFLHVLKDSMEKVNQMQNAADKT 60
Query: 62 SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + QA+ + L + +RD+I+ A +V M +
Sbjct: 61 IQDFSTGQDGVTLHQTMVAMAQADVSFQLMMQVRDRIVRAYQDVMNMPM 109
>gi|119476322|ref|ZP_01616673.1| flagellar hook-basal body complex protein (FliE) [marine gamma
proteobacterium HTCC2143]
gi|119450186|gb|EAW31421.1| flagellar hook-basal body complex protein (FliE) [marine gamma
proteobacterium HTCC2143]
Length = 126
Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQAERTLNLSI 90
G + F + + + N+S A QG S+ + + +A +
Sbjct: 49 GAAKGPQFGDMFSAAINSVNETQQTSANLSTAYQQGDAGISLSQVMVASEKASVSFQALT 108
Query: 91 ALRDKILSAVSEVSKMQI 108
+R+KI+ A +V M I
Sbjct: 109 QVRNKIVEAYQDVMNMPI 126
>gi|300899192|ref|ZP_07117469.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
198-1]
gi|300357206|gb|EFJ73076.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
198-1]
Length = 109
Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS T M ++ + ISF+ L A
Sbjct: 4 MKMSAIQGIEGVISQLQTTAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAART 59
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 60 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 109
>gi|254442973|ref|ZP_05056449.1| flagellar hook-basal body complex protein FliE [Verrucomicrobiae
bacterium DG1235]
gi|198257281|gb|EDY81589.1| flagellar hook-basal body complex protein FliE [Verrucomicrobiae
bacterium DG1235]
Length = 114
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIAL 92
+ SF +++ + A + L G+T + +++ + +A N+ + +
Sbjct: 39 PTETKSFDSIVGKFVGEVDAKHKVAVAETNKMLLGETDNVHQSMIAMQEAGVAFNMMVEV 98
Query: 93 RDKILSAVSEVSKMQI 108
R+K++ + E+ KM +
Sbjct: 99 RNKLVQSYQELMKMPV 114
>gi|238782821|ref|ZP_04626850.1| Flagellar hook-basal body protein [Yersinia bercovieri ATCC 43970]
gi|238716244|gb|EEQ08227.1| Flagellar hook-basal body protein [Yersinia bercovieri ATCC 43970]
Length = 111
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSN----EEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
IQ + + + + TQ S +G P+ FS +L +A++
Sbjct: 2 SIQSISGVLEQINFQAQQVSNTQRSPFISDRQGVEKPLQFSDILFSSVNSINEIQTQAKS 61
Query: 61 VSLAALQGKTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S L G T + + + + ++ LNL + +R+K++SA EV M +
Sbjct: 62 QSQDYLTGATDIGLNDVMVSLQKSSLALNLGVQVRNKLVSAYQEVMNMSV 111
>gi|319649568|ref|ZP_08003724.1| flagellar hook-basal body protein [Bacillus sp. 2_A_57_CT2]
gi|317398730|gb|EFV79412.1| flagellar hook-basal body protein [Bacillus sp. 2_A_57_CT2]
Length = 101
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRD 94
+ SFS++L+ + +++ ++ +G+ + + + +A T+ ++ +R+
Sbjct: 28 AQQSFSSVLKQSIEKINNAQIQSDVMTEKLAKGENVDLHQVMITSQKASITMQAALEIRN 87
Query: 95 KILSAVSEVSKMQI 108
K++ A E +MQ+
Sbjct: 88 KVIEAYQEAMRMQV 101
>gi|294500940|ref|YP_003564640.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
QM B1551]
gi|294350877|gb|ADE71206.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
QM B1551]
Length = 96
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTL 86
++ G + FS L+D ++ + +G+ +++ + +A T+
Sbjct: 15 AASTSTGQTTQQFSTFLKDSINELNNTQRASDIATEKLAKGENVEIQDVMITAQKASITM 74
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
++ +R+K + A E+ +MQ+
Sbjct: 75 QTALEIRNKAVEAYQEMMRMQM 96
>gi|324114221|gb|EGC08194.1| flagellar hook-basal body complex protein FliE [Escherichia
fergusonii B253]
Length = 106
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M + + ISF+ L A
Sbjct: 1 MNMSAIQGIQGVISQLQATAMSARAQEPMPQP----TISFAGQLHAALDRISDTQNTARV 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|325109011|ref|YP_004270079.1| flagellar hook-basal body complex protein fliE [Planctomyces
brasiliensis DSM 5305]
gi|324969279|gb|ADY60057.1| Flagellar hook-basal body complex protein fliE [Planctomyces
brasiliensis DSM 5305]
Length = 100
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDH 78
G+ ++S + + + F +LL +A+ L G+ + E
Sbjct: 14 GLTPPLIESSPK---APDVDFQSLLATSLSQTNQLEHQAQANIEGRLLGEDITSAEVYTS 70
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +AE L + +R+K++ A E+ +M+I
Sbjct: 71 LRKAEMALKMMTQVRNKLIDAFQEIQQMRI 100
>gi|260776485|ref|ZP_05885380.1| flagellar hook-basal body complex protein FliE [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607708|gb|EEX33973.1| flagellar hook-basal body complex protein FliE [Vibrio
coralliilyticus ATCC BAA-450]
Length = 103
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 20 GMRYDFTQNSNEEGG-SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
M ++ T G + F LL + G + + N+ + +G S+ + +
Sbjct: 12 AMMFEATNTKPAATGHTVGADFGDLLNNAINNVNGLSKTSSNLQMRFDRGDENVSLSDVM 71
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +I +R+K++ A E+ M +
Sbjct: 72 IARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
>gi|238788333|ref|ZP_04632127.1| Flagellar hook-basal body complex protein fliE [Yersinia
frederiksenii ATCC 33641]
gi|238723579|gb|EEQ15225.1| Flagellar hook-basal body complex protein fliE [Yersinia
frederiksenii ATCC 33641]
Length = 140
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+QG + ++ + + A + +++ +A+N L
Sbjct: 39 SVQGIEGVLQQLQVTALQASNSAKTMPAEAGFASELKAAIGKISENQQHARTQAQNFEL- 97
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + + + + ++ +L L I +R+K+++A +V M +
Sbjct: 98 GVPG-VGLNDVMVDMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 140
>gi|152965615|ref|YP_001361399.1| flagellar hook-basal body complex subunit FliE [Kineococcus
radiotolerans SRS30216]
gi|151360132|gb|ABS03135.1| flagellar hook-basal body complex subunit FliE [Kineococcus
radiotolerans SRS30216]
Length = 145
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTL 86
++ G+S F++LL G +++++++ A G T++ + + +A+
Sbjct: 64 SATAVEGTSGTDFASLLSGGLDKLQGMQSRSDDLAVKAATGDLTNVHDYMIASNEAQLAT 123
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L+ A+R+K + A +E+ +MQ+
Sbjct: 124 QLTTAIRNKAVDAFNEIMRMQV 145
>gi|224174161|ref|XP_002339855.1| predicted protein [Populus trichocarpa]
gi|222832385|gb|EEE70862.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNL 88
E + P SF+ L+ G +K+ ++ A G + + + Q++
Sbjct: 24 EAPQAQPASFTETLRGAIAGVNDAQQKSGALAKAFEMGDPSADLAKVMVASQQSQIAFRA 83
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ +R++++ A +V M +
Sbjct: 84 TVEVRNRLVQAYQDVMNMPL 103
>gi|332278896|ref|ZP_08391309.1| flagellar hook-basal body complex protein fliE [Shigella sp. D9]
gi|332101248|gb|EGJ04594.1| flagellar hook-basal body complex protein fliE [Shigella sp. D9]
Length = 114
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + ISF+ L A +
Sbjct: 11 MSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAARTQA 66
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 67 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|15612530|ref|NP_224183.1| flagellar hook-basal body protein FliE [Helicobacter pylori J99]
gi|15646164|ref|NP_208348.1| flagellar hook-basal body protein FliE [Helicobacter pylori 26695]
gi|108563931|ref|YP_628247.1| flagellar hook-basal body protein FliE [Helicobacter pylori HPAG1]
gi|188528349|ref|YP_001911036.1| flagellar hook-basal body protein FliE [Helicobacter pylori Shi470]
gi|210135736|ref|YP_002302175.1| flagellar hook-basal body protein FliE [Helicobacter pylori P12]
gi|217031710|ref|ZP_03437214.1| hypothetical protein HPB128_155g23 [Helicobacter pylori B128]
gi|217033830|ref|ZP_03439255.1| hypothetical protein HP9810_877g34 [Helicobacter pylori 98-10]
gi|298737154|ref|YP_003729684.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
B8]
gi|308185344|ref|YP_003929477.1| flagellar hook-basal body protein FliE [Helicobacter pylori SJM180]
gi|54037113|sp|P67709|FLIE_HELPJ RecName: Full=Flagellar hook-basal body complex protein FliE
gi|54041064|sp|P67708|FLIE_HELPY RecName: Full=Flagellar hook-basal body complex protein FliE
gi|122386088|sp|Q1CR49|FLIE_HELPH RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704233|sp|B6JP67|FLIE_HELP2 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704235|sp|B2UVX4|FLIE_HELPS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|2314740|gb|AAD08597.1| flagellar basal-body protein (fliE) [Helicobacter pylori 26695]
gi|4156086|gb|AAD07039.1| FLAGELLAR HOOK-BASAL BODY COMPLEX PROTEIN [Helicobacter pylori J99]
gi|107837704|gb|ABF85573.1| flagellar basal-body protein [Helicobacter pylori HPAG1]
gi|188144589|gb|ACD49006.1| flagellar hook-basal body protein FliE [Helicobacter pylori Shi470]
gi|210133704|gb|ACJ08695.1| flagellar hook-basal body protein FliE [Helicobacter pylori P12]
gi|216943728|gb|EEC23171.1| hypothetical protein HP9810_877g34 [Helicobacter pylori 98-10]
gi|216946557|gb|EEC25157.1| hypothetical protein HPB128_155g23 [Helicobacter pylori B128]
gi|261838845|gb|ACX98611.1| flagellar basal-body protein [Helicobacter pylori 51]
gi|261840250|gb|ACY00016.1| flagellar hook-basal body protein FliE [Helicobacter pylori 52]
gi|298356348|emb|CBI67220.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
B8]
gi|308061264|gb|ADO03160.1| flagellar hook-basal body protein FliE [Helicobacter pylori SJM180]
gi|308064339|gb|ADO06226.1| flagellar hook-basal body protein FliE [Helicobacter pylori Sat464]
gi|317010249|gb|ADU80829.1| flagellar hook-basal body protein FliE [Helicobacter pylori India7]
gi|317013371|gb|ADU83979.1| flagellar hook-basal body protein FliE [Helicobacter pylori
Lithuania75]
gi|317178280|dbj|BAJ56069.1| flagellar hook-basal body protein FliE [Helicobacter pylori F16]
gi|317182783|dbj|BAJ60567.1| flagellar hook-basal body protein FliE [Helicobacter pylori F57]
Length = 109
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSS-----PISFSALLQDMAKGAIGDMEKAEN 60
+Q ++ S + EE GS+ FS LL+ E+++
Sbjct: 1 MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDK 60
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + +A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 61 ALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|300904826|ref|ZP_07122652.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
84-1]
gi|301305279|ref|ZP_07211376.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
124-1]
gi|331642558|ref|ZP_08343693.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H736]
gi|300403253|gb|EFJ86791.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
84-1]
gi|300839485|gb|EFK67245.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
124-1]
gi|315257232|gb|EFU37200.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
85-1]
gi|331039356|gb|EGI11576.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H736]
Length = 106
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS T M ++ + ISF+ L A
Sbjct: 1 MKMSAIQGIEGVISQLQTTAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAART 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|315585964|gb|ADU40345.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
35A]
Length = 109
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
TD R + E+ G FS LL+ E+++ G+ + +
Sbjct: 19 TDNRTKRGESGSTFKEQKGGE---FSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQ 75
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 76 AAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|154686036|ref|YP_001421197.1| flagellar hook-basal body protein FliE [Bacillus amyloliquefaciens
FZB42]
gi|308173582|ref|YP_003920287.1| flagellar basal body protein [Bacillus amyloliquefaciens DSM 7]
gi|154351887|gb|ABS73966.1| FliE [Bacillus amyloliquefaciens FZB42]
gi|307606446|emb|CBI42817.1| flagellar basal body protein [Bacillus amyloliquefaciens DSM 7]
gi|328553486|gb|AEB23978.1| flagellar hook-basal body protein FliE [Bacillus amyloliquefaciens
TA208]
gi|328911723|gb|AEB63319.1| Flagellar hook-basal body complex protein fliE [Bacillus
amyloliquefaciens LL3]
Length = 106
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQ 81
+ + + S+ SFS LL++ K++ ++ GK ++ E + +
Sbjct: 20 TNQLNQTQKTDSSNQTSFSELLKNSIDSLNESQVKSDQITNELAAGKDVNLDEVMIAAQK 79
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A +L + R+K + A E+ +MQ+
Sbjct: 80 ANISLTAATEFRNKAVEAYQEIMRMQM 106
>gi|30250020|ref|NP_842090.1| flagellar hook-basal body protein FliE [Nitrosomonas europaea ATCC
19718]
gi|38502947|sp|Q82T49|FLIE_NITEU RecName: Full=Flagellar hook-basal body complex protein FliE
gi|30139127|emb|CAD85991.1| Flagellar hook-basal body complex protein FliE [Nitrosomonas
europaea ATCC 19718]
Length = 109
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM--REA 75
T + ++ S S F LL+ + A +S + G + +
Sbjct: 17 TSDLAAGGSKPSATVSTVSQADFGQLLKSAVDQVNTVQQTASQLSREFVGGNQDVELHDV 76
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A + I +R+++++A E+ MQ+
Sbjct: 77 MISLQKANVSFQSMIQVRNRLVTAYQEIMNMQV 109
>gi|86157821|ref|YP_464606.1| flagellar hook-basal body complex protein (FliE) [Anaeromyxobacter
dehalogenans 2CP-C]
gi|197122866|ref|YP_002134817.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
sp. K]
gi|220917657|ref|YP_002492961.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
dehalogenans 2CP-1]
gi|85774332|gb|ABC81169.1| flagellar hook-basal body complex protein (FliE) [Anaeromyxobacter
dehalogenans 2CP-C]
gi|196172715|gb|ACG73688.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
sp. K]
gi|219955511|gb|ACL65895.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 95
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 33/72 (45%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKI 96
+F L + A A+ + + G+ ++ E + +A+ + ++ +R+K+
Sbjct: 24 GGTFGRALGEALAQAEALQGAADAQAARSALGEGNLHETALALEKADVAMRVATRVRNKL 83
Query: 97 LSAVSEVSKMQI 108
+ A EV +M +
Sbjct: 84 VEAYQEVMRMSV 95
>gi|302392397|ref|YP_003828217.1| flagellar hook-basal body complex subunit FliE [Acetohalobium
arabaticum DSM 5501]
gi|302204474|gb|ADL13152.1| flagellar hook-basal body complex subunit FliE [Acetohalobium
arabaticum DSM 5501]
Length = 98
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKIL 97
SF + + ++ + ++ G+ + + + +A+ L+L++ +R+K +
Sbjct: 28 SFKKVFNNALHKVNNLQKQQDVMAKKLATGEVDNIHQVMVTATKAKLALDLTLEIRNKAV 87
Query: 98 SAVSEVSKMQI 108
+ E+ +MQ+
Sbjct: 88 ESYKEIMRMQV 98
>gi|34557979|ref|NP_907794.1| flagellar hook-basal body protein FliE [Wolinella succinogenes DSM
1740]
gi|34483697|emb|CAE10694.1| FLAGELLAR HOOK-BASAL BODY PROTEIN [Wolinella succinogenes]
Length = 100
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
I+ + + + +++ S SF+ +L+ +++E G+
Sbjct: 4 INTLNKVTSLATSSSSTSSPVESEGKSFAEILKGSIDEGNLLQKESEKALADIATGQVKD 63
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 64 LHQAAIAIGKAENSMKLMLEVRNKAISAYKEILRTQI 100
>gi|257095335|ref|YP_003168976.1| flagellar hook-basal body protein FliE [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047859|gb|ACV37047.1| flagellar hook-basal body complex subunit FliE [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 107
Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 7 QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
+G + +S ++ F+ +L++ ++A+ ++ +
Sbjct: 4 KGIDQMLSMLRATSAATGGRLAEAPSAPAAGTDFAQVLENSIAQVNQTQQQAQAMAASFA 63
Query: 67 QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G ++ + + + +A + + +R+K++SA +V MQ+
Sbjct: 64 AGNNTENLHDVMIALQKANISFQEMVQVRNKLVSAYHDVMNMQV 107
>gi|229591854|ref|YP_002873973.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
SBW25]
gi|259646003|sp|C3K0U6|FLIE_PSEFS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|229363720|emb|CAY51115.1| flagellar biosynthesis; basal-body component [Pseudomonas
fluorescens SBW25]
Length = 109
Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHI 79
+ + E G S SF+ +L + + ++ A GK + + +
Sbjct: 24 QPKSVAPAPELGQS---SFADMLGQAINKVSDTQQASSQLANAFEIGKSGVDLTDVMVAS 80
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A + +R+K++ A ++ +M +
Sbjct: 81 QKASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|229544392|ref|ZP_04433450.1| flagellar hook-basal body complex subunit FliE [Bacillus coagulans
36D1]
gi|229324877|gb|EEN90554.1| flagellar hook-basal body complex subunit FliE [Bacillus coagulans
36D1]
Length = 103
Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 21 MRYDFTQNSNEEGGSSP-----ISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMRE 74
F+ S + G++ +SFS LL+ ++ + G+ + +
Sbjct: 10 PSASFSGLSPKSAGAASSANGSVSFSDLLKQSVNELNKQQNNSDTMITKLSNGENVDLYQ 69
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A ++ ++ +R+K + E+ +MQ+
Sbjct: 70 VMVAVQKANLSMQTALEVRNKAVEGYKEMMQMQV 103
>gi|237705896|ref|ZP_04536377.1| flagellar hook-basal body complex protein fliE [Escherichia sp.
3_2_53FAA]
gi|26108609|gb|AAN80812.1|AE016762_65 Flagellar hook-basal body complex protein fliE [Escherichia coli
CFT073]
gi|91072729|gb|ABE07610.1| flagellar biosynthesis; basal-body component, possibly at
(MS-ring)-rod junction [Escherichia coli UTI89]
gi|226900653|gb|EEH86912.1| flagellar hook-basal body complex protein fliE [Escherichia sp.
3_2_53FAA]
Length = 114
Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + ISF+ L A +
Sbjct: 11 MSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAALDRISDTQTVARTQA 66
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 67 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|315648138|ref|ZP_07901239.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
vortex V453]
gi|315276784|gb|EFU40127.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
vortex V453]
Length = 102
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
+ Q N S I F + L + + A ++ + G+ ++
Sbjct: 8 SVQGVQPLQLQEQVKNGATPSESIRDFGSYLNEALNSVSAQEQNAHMMTDKLMIGQVNVD 67
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ QA ++ L+ +R+K++ A E+ + QI
Sbjct: 68 QAMISAQQALLSIQLTTQVRNKVVEAYQEIMRTQI 102
>gi|208435437|ref|YP_002267103.1| flagellar basal-body protein [Helicobacter pylori G27]
gi|254780089|ref|YP_003058196.1| flagellar hook-basal body protein FliE [Helicobacter pylori B38]
gi|308183712|ref|YP_003927839.1| flagellar hook-basal body protein FliE [Helicobacter pylori PeCan4]
gi|226704234|sp|B5Z9I8|FLIE_HELPG RecName: Full=Flagellar hook-basal body complex protein FliE
gi|208433366|gb|ACI28237.1| flagellar basal-body protein [Helicobacter pylori G27]
gi|254002002|emb|CAX30261.1| Flagellar hook-basal body complex protein FliE [Helicobacter pylori
B38]
gi|307638242|gb|ADN80692.1| Flagellar hook-basal body complex protein [Helicobacter pylori 908]
gi|308065897|gb|ADO07789.1| flagellar hook-basal body protein FliE [Helicobacter pylori PeCan4]
gi|317014992|gb|ADU82428.1| flagellar hook-basal body protein FliE [Helicobacter pylori
Gambia94/24]
gi|325996835|gb|ADZ52240.1| Flagellar hook-basal body complex protein [Helicobacter pylori
2018]
gi|325998427|gb|ADZ50635.1| Flagellar hook-basal body complex protein [Helicobacter pylori
2017]
Length = 109
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
TD R + E+ G FS LL+ E+++ G+ + +
Sbjct: 19 TDNRTKREESGNAFKEQKGGE---FSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQ 75
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 76 AAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|94263244|ref|ZP_01287061.1| Flagellar hook-basal body complex protein FliE [delta
proteobacterium MLMS-1]
gi|93456462|gb|EAT06582.1| Flagellar hook-basal body complex protein FliE [delta
proteobacterium MLMS-1]
Length = 101
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAER 84
F +L + +A+ +S + G+ ++ E + + +A
Sbjct: 18 GSQQPVRTNDVISGFGEVLGRAVDSVNQNQAEADYLSEGLVSGQHANIHETMIAVEKANI 77
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ L ++ K L A E+ +MQ+
Sbjct: 78 SFKLMSKVQQKGLDAYQEIMRMQL 101
>gi|330721829|gb|EGG99802.1| Flagellar hook-basal body complex protein FliE [gamma
proteobacterium IMCC2047]
Length = 118
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIAL 92
+ F +L D G +KA ++ A QG + + + + +A + +
Sbjct: 43 TEGPGFGEMLSDAVNGVNDAQKKAGALATAYEQGDPNVDLTQVMISMQKASVSFQAMTQV 102
Query: 93 RDKILSAVSEVSKMQI 108
R++++SA V KM +
Sbjct: 103 RNRLVSAYETVMKMPV 118
>gi|332526952|ref|ZP_08403041.1| flagellar hook-basal body complex subunit FliE [Rubrivivax
benzoatilyticus JA2]
gi|332111391|gb|EGJ11374.1| flagellar hook-basal body complex subunit FliE [Rubrivivax
benzoatilyticus JA2]
Length = 109
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
+ +GGS + + LQD ++ + V+L S+ E + + +A+
Sbjct: 32 APAQGGSFRSAMAEALQDASRNQLEAQRLQREVALD--NPTVSLEETMVAMQKAQLGFQA 89
Query: 89 SIALRDKILSAVSEVSKMQI 108
++ +R++++SA +E+ MQ+
Sbjct: 90 TVQVRNRLVSAYTEIMNMQV 109
>gi|300870980|ref|YP_003785851.1| putative flagellar hook basal body protein FliE [Brachyspira
pilosicoli 95/1000]
gi|300688679|gb|ADK31350.1| putative flagellar hook basal body protein, FliE [Brachyspira
pilosicoli 95/1000]
Length = 119
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI-------------SFSALLQDMAKGAI 52
I S S T +G Y F + + P +F +L D +
Sbjct: 3 INSVMSAYSKTGNVGDNYGFVLKTTDPRHYGPAQMLRRSSNNDLISNFGTMLSDAIESVN 62
Query: 53 GD-MEKAENVSLAALQ-GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVS 104
++K + A ++ + + + ++ I +AE +L+ + A+ D+ + A EV+
Sbjct: 63 QKQVDKDNIIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVVDRAVRAYQEVT 116
>gi|167630288|ref|YP_001680787.1| flagellar hook-basal body complex protein flie, putative
[Heliobacterium modesticaldum Ice1]
gi|167593028|gb|ABZ84776.1| flagellar hook-basal body complex protein flie, putative
[Heliobacterium modesticaldum Ice1]
Length = 87
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDK 95
P SFSA LQD ++A+ + GK + + V +A L++ +R+K
Sbjct: 15 PKSFSAFLQDALNHVNDLHKQADAAAAELAAGKAIDLHQVVIASEKAGIATQLTLQVRNK 74
Query: 96 ILSAVSEVSKMQI 108
++ A E+ +MQ+
Sbjct: 75 VMEAYQEIMRMQV 87
>gi|312962277|ref|ZP_07776769.1| Flagellar hook-basal body complex protein [Pseudomonas fluorescens
WH6]
gi|311283614|gb|EFQ62203.1| Flagellar hook-basal body complex protein [Pseudomonas fluorescens
WH6]
Length = 109
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHI 79
+ + E G S+ F+ +L + + ++ A GK + + +
Sbjct: 24 QPKSVAPAPELGQSN---FADMLGQAINKVSDTQQASSQLANAFEIGKSGVDLTDVMVAS 80
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A + +R+K++ A ++ +M +
Sbjct: 81 QKASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|255321463|ref|ZP_05362621.1| flagellar hook-basal body complex protein FliE [Campylobacter
showae RM3277]
gi|255301319|gb|EET80578.1| flagellar hook-basal body complex protein FliE [Campylobacter
showae RM3277]
Length = 100
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
I ++ ++ + + ++F +L + K A+ G+
Sbjct: 4 IDKIGSVASPFEKKEAKTLQNQKGELNFGDMLDNSLKELNEIQINADKAIADLATGEVKD 63
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +A+ ++ L + +R+K LSA E+S+ QI
Sbjct: 64 LHQAAIAIGKADTSMKLMLEIRNKALSAYKEISRTQI 100
>gi|332981430|ref|YP_004462871.1| flagellar hook-basal body complex subunit FliE [Mahella
australiensis 50-1 BON]
gi|332699108|gb|AEE96049.1| flagellar hook-basal body complex subunit FliE [Mahella
australiensis 50-1 BON]
Length = 99
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 31 EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLS 89
+ + F LL + ++ + A G + A+ +A+ L +
Sbjct: 21 GSAKAGEVDFKDLLSESMDKLNSIIQDSNAAGEALATGSIDDIHSAMIAAEKADLALQFT 80
Query: 90 IALRDKILSAVSEVSKMQI 108
I +R+KI+ A +E+ MQI
Sbjct: 81 IQIRNKIIDAYNEIMHMQI 99
>gi|300311377|ref|YP_003775469.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1]
gi|300074162|gb|ADJ63561.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1]
Length = 118
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLS 89
E + + FS +L+ +KA +S A G ++ + + +A + S
Sbjct: 40 EKAAPRVDFSEVLKGAIDQVNDSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTS 99
Query: 90 IALRDKILSAVSEVSKMQI 108
I +R+K++SA ++ MQ+
Sbjct: 100 IQVRNKLVSAYRDIMTMQV 118
>gi|302878300|ref|YP_003846864.1| flagellar hook-basal body complex subunit FliE [Gallionella
capsiferriformans ES-2]
gi|302581089|gb|ADL55100.1| flagellar hook-basal body complex subunit FliE [Gallionella
capsiferriformans ES-2]
Length = 107
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
I +++ +++ S + FS++L++ G EK+E + A
Sbjct: 4 ISAVEGLLANMRVAAAAAGLRESAPA-ASSGKVDFSSVLKNALDGVAQSHEKSEALQKAF 62
Query: 66 LQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G K S+ + + + ++ +I +R+K++ A +++ MQ+
Sbjct: 63 VMGDDKVSLSDTMIAMQKSGINFQATIQVRNKVILAYNDIMNMQV 107
>gi|220935139|ref|YP_002514038.1| flagellar hook-basal body protein FliE [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996449|gb|ACL73051.1| flagellar hook-basal body protein FliE [Thioalkalivibrio sp.
HL-EbGR7]
Length = 105
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 20 GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR--EAVD 77
+ + N+ S ++F+ +L+ + A + A G ++ + +
Sbjct: 15 ALAANSGLNATPAQEPSGVNFAQMLKQSLDQVNQTQQAASELRNAFELGDPNVNLAQVMV 74
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ + +R+++L+A E+ +M +
Sbjct: 75 AMQKSSISFEAVNQVRNRLLNAYQEIMRMPL 105
>gi|56964035|ref|YP_175766.1| flagellar hook-basal body complex protein FliE [Bacillus clausii
KSM-K16]
gi|56910278|dbj|BAD64805.1| flagellar hook-basal body complex protein FliE [Bacillus clausii
KSM-K16]
Length = 98
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 21 MRYDFTQNSNEEGGSSPISF-SALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
++ TQ E S F SALL + + +E Q + + +
Sbjct: 10 LQPLATQAGKTEVTSKGADFKSALLNALHSVNQDQLASSEATQALVKQEPIDVHDVMIAA 69
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A ++ ++ +R+K + A E+ +MQI
Sbjct: 70 SKASVSMQAALEVRNKAVEAYQEMMRMQI 98
>gi|34498592|ref|NP_902807.1| flagellar hook-basal body protein FliE [Chromobacterium violaceum
ATCC 12472]
gi|34104446|gb|AAQ60804.1| flagellar hook-basal body complex protein [Chromobacterium
violaceum ATCC 12472]
Length = 107
Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 25 FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG---KTSMREAVDHIMQ 81
+ + + + FS +L+ + + +E + G + ++++ + + +
Sbjct: 21 SGKQAPAAQQTPQVDFSDVLKSTIEQVNSAQQTSEEMQKQFQLGDNKEVNLQDVMMSLQK 80
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + + R+K++SA E+ Q+
Sbjct: 81 ASLSFQTMVQARNKLVSAYQEIMNTQV 107
>gi|207092227|ref|ZP_03240014.1| flagellar hook-basal body protein FliE [Helicobacter pylori
HPKX_438_AG0C1]
Length = 87
Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
+ FS LL+ E+++ G+ + +A I +AE +
Sbjct: 5 NQAAPLKNKKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 64
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ L + +R+K +SA E+ + QI
Sbjct: 65 MKLMLEVRNKAISAYKELLRTQI 87
>gi|71906415|ref|YP_284002.1| flagellar hook-basal body protein FliE [Dechloromonas aromatica
RCB]
gi|71846036|gb|AAZ45532.1| Flagellar hook-basal body complex protein FliE [Dechloromonas
aromatica RCB]
Length = 107
Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
G +S T + + F+ +LQ ++A+ ++
Sbjct: 5 GIEQMLSALRTTATQATGKAADTSASAAGGADFAQILQGSIDKVNQTQQQADQMAEKLAA 64
Query: 68 GKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G T+ + E + + A + + +R+K+++A +V MQI
Sbjct: 65 GDTNQNLHEVMIALQTASVSFQEMVQVRNKLVTAYQDVMNMQI 107
>gi|293605028|ref|ZP_06687422.1| flagellar hook-basal body complex protein FliE [Achromobacter
piechaudii ATCC 43553]
gi|292816577|gb|EFF75664.1| flagellar hook-basal body complex protein FliE [Achromobacter
piechaudii ATCC 43553]
Length = 110
Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAK--GAIGDMEKA 58
M + + G S + T+ + + + E P F+A LQ + + + A
Sbjct: 1 MAVSGLNGIESMLQQMRTVVSKAETGNLAAGEAVGQPDGFAAELQRSIRRVTSAQNASSA 60
Query: 59 ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + S+ + + + +A ++ +R+K+++A E+S M +
Sbjct: 61 QAKAFEMGAPDISLNDVIIDMQKASLGFQTAVQVRNKLVAAYKEISSMAV 110
>gi|260886630|ref|ZP_05897893.1| flagellar hook-basal body complex protein FliE [Selenomonas
sputigena ATCC 35185]
gi|330839538|ref|YP_004414118.1| flagellar hook-basal body complex subunit FliE [Selenomonas
sputigena ATCC 35185]
gi|260863773|gb|EEX78273.1| flagellar hook-basal body complex protein FliE [Selenomonas
sputigena ATCC 35185]
gi|329747302|gb|AEC00659.1| flagellar hook-basal body complex subunit FliE [Selenomonas
sputigena ATCC 35185]
Length = 99
Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILS 98
F L D G ++++E +++ G+ T + E V +A L++ +R++ +
Sbjct: 30 FHEFLTDSLGEVNGLIKESERLNMELAAGRITDVSEVVIASEKAGIATQLTMQVRNRAVE 89
Query: 99 AVSEVSKMQI 108
A E+ +MQ+
Sbjct: 90 AYQEIMRMQV 99
>gi|331647531|ref|ZP_08348623.1| flagellar hook-basal body complex protein FliE [Escherichia coli
M605]
gi|331043255|gb|EGI15393.1| flagellar hook-basal body complex protein FliE [Escherichia coli
M605]
Length = 106
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M ++ + ISF+ L A
Sbjct: 1 MKMSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAART 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|212709513|ref|ZP_03317641.1| hypothetical protein PROVALCAL_00555 [Providencia alcalifaciens DSM
30120]
gi|212687851|gb|EEB47379.1| hypothetical protein PROVALCAL_00555 [Providencia alcalifaciens DSM
30120]
Length = 103
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQ +S + + + + E A + + + + +K ++ +L
Sbjct: 2 TIQAIEGVVSQLNVVATQAAYNTKPVVEPVGFADHLVASVNQINETRVQSAQKVQDFTLG 61
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ S+ + + + ++ +L + I +R+K++SA E+ M +
Sbjct: 62 --KPDVSLNDVMVDMQKSSLSLQMGIQVRNKLVSAYQEIMSMPV 103
>gi|300822294|ref|ZP_07102435.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
119-7]
gi|300920155|ref|ZP_07136605.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
115-1]
gi|301327723|ref|ZP_07220928.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
78-1]
gi|309795957|ref|ZP_07690370.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
145-7]
gi|300412812|gb|EFJ96122.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
115-1]
gi|300525177|gb|EFK46246.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
119-7]
gi|300845723|gb|EFK73483.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
78-1]
gi|308120407|gb|EFO57669.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
145-7]
gi|324018869|gb|EGB88088.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
117-3]
Length = 114
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + ISF+ L A +
Sbjct: 11 MSAIQGIEGVISQLQATAMSARAQDSLPQP----TISFAGQLHAALDRISDTQTAARTQA 66
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 67 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114
>gi|109948139|ref|YP_665367.1| flagellar hook-basal body protein FliE [Helicobacter acinonychis
str. Sheeba]
gi|123362497|sp|Q17VF8|FLIE_HELAH RecName: Full=Flagellar hook-basal body complex protein FliE
gi|109715360|emb|CAK00368.1| fliE [Helicobacter acinonychis str. Sheeba]
Length = 109
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSS-----PISFSALLQDMAKGAIGDMEKAEN 60
+Q ++ S + EE GS+ FS LL+ E+++
Sbjct: 1 MQAIHNDKSLLSPFSELNTDNRTQREESGSTFKEQKGGEFSKLLKQSISELNNTQEQSDK 60
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + +A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 61 ALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|307720250|ref|YP_003891390.1| flagellar hook-basal body complex subunit FliE [Sulfurimonas
autotrophica DSM 16294]
gi|306978343|gb|ADN08378.1| flagellar hook-basal body complex subunit FliE [Sulfurimonas
autotrophica DSM 16294]
Length = 100
Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
I++ Q S E G +F+ L+ + +E G+
Sbjct: 4 INNISGASTADLLKQKSAVEKGGGGEAFAEQLKSAINEVNDIQQDSEKAIADLATGQVKD 63
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A I +AE ++ L + +R+K L+A E+ + Q+
Sbjct: 64 LHQAALAIGKAETSMKLMLEIRNKALNAYKEIGRTQL 100
>gi|240145508|ref|ZP_04744109.1| flagellar hook-basal body complex protein FliE [Roseburia
intestinalis L1-82]
gi|257202323|gb|EEV00608.1| flagellar hook-basal body complex protein FliE [Roseburia
intestinalis L1-82]
gi|291536001|emb|CBL09113.1| flagellar hook-basal body complex protein FliE [Roseburia
intestinalis M50/1]
gi|291538495|emb|CBL11606.1| flagellar hook-basal body complex protein FliE [Roseburia
intestinalis XB6B4]
Length = 103
Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 13 ISHTDTIGMRYDFTQNSNEEG---GSSPISFSALLQDMA---KGAIGDMEKAENVSLAAL 66
+ T G+ D+ + E+ +S SF ++L AE +
Sbjct: 1 MDITSLTGITSDYIEKVAEQNRLVNTSDDSFQSVLDSAMNVLSETSDLQNDAEAAQIEFA 60
Query: 67 QGKTSM-REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
GK + +A L + A+RDK+L A E+ MQI
Sbjct: 61 LGKADNPHDMQIAAKKALTALQYTTAVRDKMLDAYKEIMNMQI 103
>gi|283785707|ref|YP_003365572.1| flagellar hook-basal body complex protein FliE [Citrobacter
rodentium ICC168]
gi|282949161|emb|CBG88769.1| flagellar hook-basal body complex protein FliE [Citrobacter
rodentium ICC168]
Length = 104
Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMGARAQETLPQPTVSFAGQLHAALDRISDRQTDARVQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGIALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|192361742|ref|YP_001982190.1| flagellar hook-basal body complex protein FliE [Cellvibrio
japonicus Ueda107]
gi|226704224|sp|B3PEY6|FLIE_CELJU RecName: Full=Flagellar hook-basal body complex protein FliE
gi|190687907|gb|ACE85585.1| flagellar hook-basal body complex protein (FliE) [Cellvibrio
japonicus Ueda107]
Length = 124
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERT---LNLSIALRDK 95
SF L+ + + ++ A +G + + D ++ ++++ ++ +R+K
Sbjct: 53 SFGDLMTQAVSKVNETQKASSAMADAYERGVAGV-DITDVMIASQKSSIAFQATVQVRNK 111
Query: 96 ILSAVSEVSKMQI 108
++ A +V M I
Sbjct: 112 LIEAYRDVMNMPI 124
>gi|195952551|ref|YP_002120841.1| flagellar hook-basal body complex subunit FliE [Hydrogenobaculum
sp. Y04AAS1]
gi|195932163|gb|ACG56863.1| flagellar hook-basal body complex subunit FliE [Hydrogenobaculum
sp. Y04AAS1]
Length = 101
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLN 87
+ SF +L + + AE A L+G + +AV +A LN
Sbjct: 21 KPKSQNQGAESFFDVLSNFLNYTNDVQQTAEATKKAILEGADIPLHDAVVQFDKAGVVLN 80
Query: 88 LSIALRDKILSAVSEVSKMQI 108
L + +R+K+L A + Q+
Sbjct: 81 LLVQVRNKLLDAYQTLINTQV 101
>gi|306817685|ref|ZP_07451427.1| flagellar basal-body protein [Mobiluncus mulieris ATCC 35239]
gi|307699810|ref|ZP_07636861.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|304649499|gb|EFM46782.1| flagellar basal-body protein [Mobiluncus mulieris ATCC 35239]
gi|307614848|gb|EFN94066.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 142
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKI 96
SF + D+ A + + A+ G+ + + +++ T+ LS +R+K
Sbjct: 71 TSFGNIFADVVANMQMRERTAHRLGVQAVTGQLNDVHDYTIAAAESQLTIELSSTIRNKA 130
Query: 97 LSAVSEVSKMQ 107
+ +E+ +MQ
Sbjct: 131 VDMFNEIMRMQ 141
>gi|283782091|ref|YP_003372846.1| flagellar hook-basal body complex subunit FliE [Pirellula staleyi
DSM 6068]
gi|283440544|gb|ADB18986.1| flagellar hook-basal body complex subunit FliE [Pirellula staleyi
DSM 6068]
Length = 102
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
+ + GG+ P F +L + A+ + G + E + +
Sbjct: 16 PSTGAIGGAEQTGGAQP--FKNVLLEALDQVNNVQHDADQAVQQLVTGGDVNPAEVLTTL 73
Query: 80 MQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A+ + + + +R+K++ A EVS ++I
Sbjct: 74 QKADMSFRMMMQIRNKLVQAYQEVSNIRI 102
>gi|295098293|emb|CBK87383.1| flagellar hook-basal body complex protein FliE [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 104
Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG +S M +++ G +SF+ L A +
Sbjct: 2 AIQGIEGVLSQLQATAMTARNQSVADQPPG---VSFAGQLHAALDRISDKQNAARTQAER 58
Query: 65 ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A +L + + +R+K++SA EV MQ+
Sbjct: 59 FTLGEPGVALNDVMADLQKASVSLQMGLQVRNKLVSAYQEVMGMQV 104
>gi|296103557|ref|YP_003613703.1| flagellar hook-basal body protein FliE [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058016|gb|ADF62754.1| flagellar hook-basal body protein FliE [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 104
Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG IS M +N N ISF+ L A +
Sbjct: 2 AIQGIEGVISQLQATAMTA---RNQNVAEQQPTISFAGQLHAALDRISDTQTAARTQAEK 58
Query: 65 ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A +L + I +R+K++SA EV MQ+
Sbjct: 59 FTLGEPGVALNDVMTDLQKASVSLQMGIQVRNKLVSAYQEVMGMQV 104
>gi|118581825|ref|YP_903075.1| flagellar hook-basal body complex subunit FliE [Pelobacter
propionicus DSM 2379]
gi|118504535|gb|ABL01018.1| flagellar hook-basal body complex subunit FliE [Pelobacter
propionicus DSM 2379]
Length = 100
Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--- 71
+ I G + S + + +N S A+QG S
Sbjct: 2 ELNGIESGLGIGSAFPATGSAKQTSPVEGAGKFFTELVSKVNDLQNQSDRAIQGLASGEN 61
Query: 72 --MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + + +A + +R+K + A EV +MQ+
Sbjct: 62 KNLHEVMISMEKASISFLFMSQVRNKAIEAYQEVMRMQL 100
>gi|218549261|ref|YP_002383052.1| flagellar hook-basal body protein FliE [Escherichia fergusonii ATCC
35469]
gi|226704232|sp|B7LTC6|FLIE_ESCF3 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|218356802|emb|CAQ89430.1| flagellar basal-body component [Escherichia fergusonii ATCC 35469]
Length = 104
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + ISF+ L A +
Sbjct: 1 MSAIQGIQGVISQLQATAMSARAQEPMPQP----TISFAGQLHAALDRISDTQNTARVQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|15606426|ref|NP_213806.1| flagellar hook-basal body protein [Aquifex aeolicus VF5]
gi|6225354|sp|O67242|FLIE_AQUAE RecName: Full=Flagellar hook-basal body complex protein FliE
gi|2983640|gb|AAC07208.1| flagellar hook-basal body protein [Aquifex aeolicus VF5]
Length = 93
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILS 98
F ++ + + + + E V L+G+ + E V +A+ LNL I +R+K+L
Sbjct: 28 FVNFVEWVNEKQLKSKKLKEAV----LEGRDVPLHEIVIEAEKAKVALNLLIEVRNKLLE 83
Query: 99 AVSEVSKMQI 108
A +E+ KMQ+
Sbjct: 84 AYNELMKMQV 93
>gi|315452790|ref|YP_004073060.1| putative flagellar hook-basal body complex protein [Helicobacter
felis ATCC 49179]
gi|315131842|emb|CBY82470.1| putative flagellar hook-basal body complex protein [Helicobacter
felis ATCC 49179]
Length = 100
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
FSA+L+ ++++ G+ + +A I +AE ++ L + +R+K +S
Sbjct: 31 FSAMLKHSIDELNNTQKESDKALADMATGQVKDLHQAAIAIGKAETSMKLMLEVRNKAIS 90
Query: 99 AVSEVSKMQI 108
A E+ + QI
Sbjct: 91 AYKELLRTQI 100
>gi|304438471|ref|ZP_07398411.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304368554|gb|EFM22239.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 100
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIG-DMEKAE 59
M ++ +Q T + +G D +Q F L+D + E
Sbjct: 1 MEVQALQMTPVTMRAPSHLGETIDKSQRK---------DFGTYLKDALSEVNHLQLASEE 51
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L A + + + +AE L L++ +R++ +SA E+ +MQ+
Sbjct: 52 QTKLLAAGEVEDVSQVIVAGQKAEIALQLTLQMRNRAVSAYQEIMRMQV 100
>gi|54294648|ref|YP_127063.1| flagellar hook-basal body complex protein [Legionella pneumophila
str. Lens]
gi|53754480|emb|CAH15964.1| Flagellar hook-basal body complex protein [Legionella pneumophila
str. Lens]
Length = 104
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ + G + SFS++ Q + A+++ G S+ E + ++
Sbjct: 20 AEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSN 79
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
++ +R+K + A ++ M +
Sbjct: 80 LGFEATLRVRNKFVQAYQDIMNMPV 104
>gi|330808214|ref|YP_004352676.1| flagellar hook-basal body protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376322|gb|AEA67672.1| flagellar hook-basal body protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 108
Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALR 93
SFS +L + + ++ A GK + + + +A + +R
Sbjct: 34 GGSSFSDMLGQAVNKVNDTQQASNQLASAFEIGKSGVDLTDVMISSQKASVSFQALTQVR 93
Query: 94 DKILSAVSEVSKMQI 108
+K++ A ++ +M +
Sbjct: 94 NKLVQAYQDIMQMPV 108
>gi|323186813|gb|EFZ72133.1| flagellar hook-basal body complex protein [Escherichia coli
RN587/1]
Length = 104
Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARVQESLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|300818644|ref|ZP_07098852.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
107-1]
gi|301644605|ref|ZP_07244594.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
146-1]
gi|300528816|gb|EFK49878.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
107-1]
gi|301077080|gb|EFK91886.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
146-1]
Length = 106
Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + IQG IS M + + ISF+ L A
Sbjct: 1 MKMSAIQGIEGVISQLQATAMSARAQDSLPQP----TISFAGQLHAALDRISDTQTAART 56
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106
>gi|70729029|ref|YP_258763.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
Pf-5]
gi|123657113|sp|Q4KG70|FLIE_PSEF5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|68343328|gb|AAY90934.1| flagellar hook-basal body complex protein (FliE) [Pseudomonas
fluorescens Pf-5]
Length = 108
Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
+ M S S SF+ +L + + +S A GK + +
Sbjct: 16 AMQMDAMSQPKSAAVAEVSGSSFADMLGQAVNKVNDTQQASNQLSSAFEIGKSGVDLTDV 75
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A + +R+K++ A ++ +M +
Sbjct: 76 MISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 108
>gi|330961219|gb|EGH61479.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 109
Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK+ + + + +
Sbjct: 23 SAPKPVSGPQEAGASSFADMLGQAVNKVAQTQQASSQLASAFEVGKSGIDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|183598655|ref|ZP_02960148.1| hypothetical protein PROSTU_02062 [Providencia stuartii ATCC 25827]
gi|188020841|gb|EDU58881.1| hypothetical protein PROSTU_02062 [Providencia stuartii ATCC 25827]
Length = 121
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQ +S T ++ Q E + + + ++ E+ +L
Sbjct: 20 TIQAIEGVLSQLQTTALQAANHQKPVVEPVGFADHLVSAVNQINTVRNQSAKQIEDFTLG 79
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ S+ + + + +A +L + I +R+K+++A EV + +
Sbjct: 80 --KSNVSLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEVMSIPV 121
>gi|160332315|sp|Q4R8T1|EFCB6_MACFA RecName: Full=EF-hand calcium-binding domain-containing protein 6;
AltName: Full=DJ-1-binding protein; Short=DJBP
Length = 646
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 20/33 (60%)
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
++ + + + +++ ++A RDK++ ++SK
Sbjct: 84 QQLQEEMKELQQSTEKAVAARDKLVDCYQDISK 116
>gi|109094488|ref|XP_001108836.1| PREDICTED: EF-hand calcium-binding domain-containing protein 6-like
isoform 1 [Macaca mulatta]
gi|109094490|ref|XP_001108880.1| PREDICTED: EF-hand calcium-binding domain-containing protein 6-like
isoform 2 [Macaca mulatta]
Length = 1349
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 20/33 (60%)
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
++ + + + +++ ++A RDK++ ++SK
Sbjct: 787 QQLQEEMKELQQSTEKAVAARDKLVDCYQDISK 819
>gi|109094486|ref|XP_001108976.1| PREDICTED: EF-hand calcium-binding domain-containing protein 6-like
isoform 4 [Macaca mulatta]
Length = 1501
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 20/33 (60%)
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
++ + + + +++ ++A RDK++ ++SK
Sbjct: 939 QQLQEEMKELQQSTEKAVAARDKLVDCYQDISK 971
>gi|67968017|dbj|BAE00490.1| unnamed protein product [Macaca fascicularis]
Length = 570
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 20/33 (60%)
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
++ + + + +++ ++A RDK++ ++SK
Sbjct: 8 QQLQEEMKELQQSTEKAVAARDKLVDCYQDISK 40
>gi|293395604|ref|ZP_06639887.1| flagellar hook-basal body complex protein FliE [Serratia odorifera
DSM 4582]
gi|291421923|gb|EFE95169.1| flagellar hook-basal body complex protein FliE [Serratia odorifera
DSM 4582]
Length = 104
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG + ++ N+ G+ SF++ L+ + A +
Sbjct: 2 AIQGIEGVLQQLQATALQAGGITNAPPAQGA---SFASELKAAIGKISNIQQTARQQAQN 58
Query: 65 ALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G S+ + + + ++ +L + I +R+K+++A +V MQ+
Sbjct: 59 FEMGVPGISLNDVMVDLQKSSVSLQMGIQVRNKLVAAYQDVMNMQV 104
>gi|194439601|ref|ZP_03071674.1| flagellar hook-basal body complex protein [Escherichia coli 101-1]
gi|218695542|ref|YP_002403209.1| flagellar hook-basal body protein FliE [Escherichia coli 55989]
gi|218705430|ref|YP_002412949.1| flagellar hook-basal body protein FliE [Escherichia coli UMN026]
gi|256022405|ref|ZP_05436270.1| flagellar hook-basal body protein FliE [Escherichia sp. 4_1_40B]
gi|293405420|ref|ZP_06649412.1| fliE [Escherichia coli FVEC1412]
gi|293410292|ref|ZP_06653868.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B354]
gi|298381063|ref|ZP_06990662.1| flagellar hook-basal body complex protein fliE [Escherichia coli
FVEC1302]
gi|307138604|ref|ZP_07497960.1| flagellar hook-basal body protein FliE [Escherichia coli H736]
gi|331663433|ref|ZP_08364343.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA143]
gi|331683489|ref|ZP_08384090.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H299]
gi|254789308|sp|B7L8U9|FLIE_ECO55 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|194421510|gb|EDX37524.1| flagellar hook-basal body complex protein [Escherichia coli 101-1]
gi|218352274|emb|CAU98031.1| flagellar basal-body component [Escherichia coli 55989]
gi|218432527|emb|CAR13420.1| flagellar basal-body component [Escherichia coli UMN026]
gi|284921845|emb|CBG34920.1| flagellar hook-basal body complex protein FliE [Escherichia coli
042]
gi|291427628|gb|EFF00655.1| fliE [Escherichia coli FVEC1412]
gi|291470760|gb|EFF13244.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B354]
gi|298278505|gb|EFI20019.1| flagellar hook-basal body complex protein fliE [Escherichia coli
FVEC1302]
gi|323972763|gb|EGB67963.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA007]
gi|331059232|gb|EGI31209.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA143]
gi|331079704|gb|EGI50901.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H299]
gi|332343663|gb|AEE56997.1| flagellar hook-basal body complex protein FliE [Escherichia coli
UMNK88]
Length = 104
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS T M ++ + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQTTAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|295706286|ref|YP_003599361.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
DSM 319]
gi|294803945|gb|ADF41011.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
DSM 319]
Length = 96
Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTL 86
++ G + FS L+D ++ + +G+ +++ + +A T+
Sbjct: 15 AASTSTGQTTQQFSTFLKDSINELNNTQRASDIATEKLAKGENVELQDVMITAQKASITM 74
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+++ +R+K + A E+ +MQ+
Sbjct: 75 QMALEIRNKAVEAYQEMMRMQM 96
>gi|78776564|ref|YP_392879.1| flagellar hook-basal body protein FliE [Sulfurimonas denitrificans
DSM 1251]
gi|78497104|gb|ABB43644.1| Flagellar hook-basal body complex protein FliE [Sulfurimonas
denitrificans DSM 1251]
Length = 99
Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
+ + ++ G+ F+ L+ + +E G+ + +A I
Sbjct: 12 SAELLKQKSKVEGAGGEDFANHLKSAINEVNELQQNSELALGDMATGQVKDLHQAALAIG 71
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+AE ++ L + +R+K LSA E+S+ Q+
Sbjct: 72 KAETSMKLMLEIRNKALSAYKELSRTQL 99
>gi|292492380|ref|YP_003527819.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
halophilus Nc4]
gi|291580975|gb|ADE15432.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
halophilus Nc4]
Length = 106
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERT 85
++ G ++ F+ LL+ +++ ++ A + G+ + E + +A +
Sbjct: 24 SARTSGEATGNEFALLLEQALNSVNQAQQQSSDLETAFVLGESNVDLSEVMIASQKASVS 83
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ +R++++SA E+ MQI
Sbjct: 84 FQAVLQVRNRLVSAYQEIMNMQI 106
>gi|224437869|ref|ZP_03658816.1| flagellar hook-basal body protein FliE [Helicobacter cinaedi CCUG
18818]
gi|313144318|ref|ZP_07806511.1| flagellar hook-basal body complex protein fliE [Helicobacter
cinaedi CCUG 18818]
gi|313129349|gb|EFR46966.1| flagellar hook-basal body complex protein fliE [Helicobacter
cinaedi CCUG 18818]
Length = 101
Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 30 NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNL 88
N + + F L+ + + + +E G+ + +A I +AE ++ +
Sbjct: 22 NTQNRQDGLDFINTLKSSIQEVNTEQQISEKALADMASGQVKDLHQAAIAINRAENSMKV 81
Query: 89 SIALRDKILSAVSEVSKMQI 108
+ +R+K ++A E+ + QI
Sbjct: 82 MLEVRNKAINAYKEILRTQI 101
>gi|297380731|gb|ADI35618.1| flagellar hook-basal body complex protein (FliE) [Helicobacter
pylori v225d]
gi|308062840|gb|ADO04728.1| flagellar hook-basal body protein FliE [Helicobacter pylori Cuz20]
Length = 109
Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
TD R + E+ G FS LL+ E+++ G+ + +
Sbjct: 19 TDNRTKREESGSTFKEQKGGE---FSKLLKQSINELNSTQEQSDKALADMATGQIKDLHQ 75
Query: 75 AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A I +AE ++ L + +R+K +SA E+ + QI
Sbjct: 76 AAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
>gi|52841988|ref|YP_095787.1| flagellar hook-basal body protein FliE [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|148359305|ref|YP_001250512.1| flagellar hook-basal body protein FliE [Legionella pneumophila str.
Corby]
gi|296107352|ref|YP_003619052.1| flagellar hook-basal body complex protein FliE [Legionella
pneumophila 2300/99 Alcoy]
gi|52629099|gb|AAU27840.1| flagellar hook-basal body protein FliE [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|148281078|gb|ABQ55166.1| flagellar hook-basal body protein FliE [Legionella pneumophila str.
Corby]
gi|295649253|gb|ADG25100.1| flagellar hook-basal body complex protein FliE [Legionella
pneumophila 2300/99 Alcoy]
gi|307610460|emb|CBX00031.1| flagellar hook-basal body complex protein [Legionella pneumophila
130b]
Length = 104
Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ + G + SFS++ Q + A+++ G S+ E + ++
Sbjct: 20 AEGIKPDSGLNHASFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSN 79
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
++ +R+K++ A ++ M +
Sbjct: 80 LGFEATLRVRNKLVQAYQDIMNMPV 104
>gi|227876738|ref|ZP_03994847.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
ATCC 35243]
gi|269976265|ref|ZP_06183261.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
28-1]
gi|227842635|gb|EEJ52835.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
ATCC 35243]
gi|269935594|gb|EEZ92132.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
28-1]
Length = 142
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 38 ISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKI 96
SF + D+ A + + A+ G+ + + +++ T+ LS +R+K
Sbjct: 71 TSFGNIFADVVANMQMRERTAHRLGVQAVTGQLNDVHDYTIAAAESQLTIELSSTIRNKA 130
Query: 97 LSAVSEVSKMQ 107
+ +E+ +MQ
Sbjct: 131 VDMFNEIMRMQ 141
>gi|333003293|gb|EGK22839.1| flagellar hook-basal body complex protein [Shigella flexneri K-218]
Length = 104
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSACAQESLPQPTISFAGQLHAALDRISDTQTVARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|323174687|gb|EFZ60307.1| flagellar hook-basal body complex protein [Escherichia coli LT-68]
Length = 104
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQDSLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K++ A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVEAYQEVMSMQV 104
>gi|302342346|ref|YP_003806875.1| flagellar hook-basal body complex subunit FliE [Desulfarculus
baarsii DSM 2075]
gi|301638959|gb|ADK84281.1| flagellar hook-basal body complex subunit FliE [Desulfarculus
baarsii DSM 2075]
Length = 97
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 15 HTDTIGMRYDFTQNSNE-EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
I + + + F+ L+ + AEN G + ++
Sbjct: 2 SVGPIKPLVGMVTGTPGFQDPKAQGGFADTLKQAVNEVEQMHQTAENSVQDLATGSRKTL 61
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
+ + + +A+ + + +R K++ A E+ +M
Sbjct: 62 HQTMIDVEKADIAFRMLMGVRGKMIGAYQEIWRM 95
>gi|304390253|ref|ZP_07372207.1| possible flagellar hook-basal body complex subunit FliE [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304326735|gb|EFL93979.1| possible flagellar hook-basal body complex subunit FliE [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 143
Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP----------ISFSALLQDMAKGA 51
+++ + + S + + + + + G +P SF + D
Sbjct: 26 LVQSLGFSRSAATQAGPARLGTNASSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNM 85
Query: 52 IGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
A+ + + AL G+ + + +++ T+ L+ +R+K + +E+ +MQ
Sbjct: 86 QQRESTAKKLGVQALTGQLNDVHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 142
>gi|104782822|ref|YP_609320.1| flagellar hook-basal body protein FliE [Pseudomonas entomophila
L48]
gi|122402481|sp|Q1I749|FLIE_PSEE4 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|95111809|emb|CAK16533.1| flagellar basal-body component FliE [Pseudomonas entomophila L48]
Length = 110
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERT 85
+ E SF+ +L + + ++ A GK + + + +A +
Sbjct: 28 TAAPELAPGQSSFADMLGQAIGKVHETQQASSQLANAFEIGKSGVDLTDVMIASQKASVS 87
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+R+K++ A ++ +M +
Sbjct: 88 FQALTQVRNKLVQAYQDIMQMPV 110
>gi|157692299|ref|YP_001486761.1| flagellar hook-basal body protein FliE [Bacillus pumilus SAFR-032]
gi|194014927|ref|ZP_03053544.1| flagellar hook-basal body complex protein (FliE) [Bacillus pumilus
ATCC 7061]
gi|157681057|gb|ABV62201.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
gi|194013953|gb|EDW23518.1| flagellar hook-basal body complex protein (FliE) [Bacillus pumilus
ATCC 7061]
Length = 105
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
+ + F + + S +FS +L++ + K++ + A
Sbjct: 2 VNAISPFQLQAAQQASELTNASSVHAAAPKSQTNFSDVLKNSIEALNQSQLKSDQYTNAL 61
Query: 66 LQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
QGK ++ E + +A TL + R+K + A E+ +MQ+
Sbjct: 62 AQGKDVNLDEVMIASQKASVTLTAATEFRNKAVEAYQEIMRMQM 105
>gi|254458858|ref|ZP_05072282.1| flagellar hook-basal body complex protein FliE [Campylobacterales
bacterium GD 1]
gi|207084624|gb|EDZ61912.1| flagellar hook-basal body complex protein FliE [Campylobacterales
bacterium GD 1]
Length = 102
Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
+ + N+ G+ +F+ L+ E +E G+ + +A I
Sbjct: 15 TAELLKQKNKIDGAGGEAFADHLKSALNEVNDLQEISEKAIGDMATGQVKDLHQAALAIG 74
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+AE ++ L + +R+K L+A E+ + Q+
Sbjct: 75 KAETSMKLMLEIRNKALNAYKELGRTQL 102
>gi|37199415|dbj|BAC95246.1| flagellar hook-basal body protein FliE [Vibrio vulnificus YJ016]
Length = 122
Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+E + F + + T + G FS LL + + ++
Sbjct: 16 LEVTMRIDGFNGEMRAMMLEASNT-TAPATGAKVSADFSTLLNQAINNVNSLQKSSSDLQ 74
Query: 63 LAALQGKTSMR--EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+G + + + ++ ++ +R+K++ A ++ M +
Sbjct: 75 TRFDRGDADVSLSDVMIARNKSSVAFEATVQVRNKLVEAYKDLMNMPV 122
>gi|332296505|ref|YP_004438428.1| flagellar hook-basal body complex protein FliE [Thermodesulfobium
narugense DSM 14796]
gi|332179608|gb|AEE15297.1| flagellar hook-basal body complex protein FliE [Thermodesulfobium
narugense DSM 14796]
Length = 94
Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 18 TIGMRYDFTQNSNEEGGSSPIS-FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
+ N G S P S F L D +++ + + GK + A+
Sbjct: 3 PVEPINPNITPINLTGKSEPTSNFKDALMDFLGNVNSSLKEGDRAAEQLAAGKIDLPTAL 62
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKM 106
A ++ L +++R +++ A ++S++
Sbjct: 63 IKQEDAVLSMQLLMSVRSELIGAYQDLSRI 92
>gi|302037603|ref|YP_003797925.1| flagellar hook-basal body complex protein FliE [Candidatus
Nitrospira defluvii]
gi|300605667|emb|CBK42000.1| Flagellar hook-basal body complex protein FliE [Candidatus
Nitrospira defluvii]
Length = 103
Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 52 IGDMEKAENVSLAAL-QGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
I D + + ++ AL G+ T++ + + + QA+ + L + +R+K+++A E+ +MQI
Sbjct: 45 INDAQTGASQAVDALVTGQSTNIHQTMVALQQADVSFQLMMQVRNKLVTAYEEIQRMQI 103
>gi|315654576|ref|ZP_07907482.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
ATCC 51333]
gi|315657518|ref|ZP_07910400.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
gi|315491040|gb|EFU80659.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
ATCC 51333]
gi|315491990|gb|EFU81599.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
Length = 143
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 11/117 (9%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP----------ISFSALLQDMAKGA 51
+++ + + S + + + + G +P SF + D
Sbjct: 26 LVQSLGFSRSAATQAGPARLGTNAPSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNM 85
Query: 52 IGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
A+ + + AL G+ + + +++ T+ L+ +R+K + +E+ +MQ
Sbjct: 86 QQRESTAKKLGVQALTGQLNDVHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 142
>gi|126697818|ref|YP_001086715.1| flagellar hook-basal body protein FliE [Clostridium difficile 630]
gi|115249255|emb|CAJ67068.1| Flagellar hook-basal body complex protein FliE [Clostridium
difficile]
Length = 105
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 45 QDMAKGAIGDME----KAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSA 99
+D+ I + A+++ ++G+ SM E + +A+ ++ I +R+KI A
Sbjct: 37 EDVIIDTIDKVNFQQVTADDMKEKFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDA 96
Query: 100 VSEVSKMQI 108
E++K+QI
Sbjct: 97 YQEMNKVQI 105
>gi|89094456|ref|ZP_01167396.1| flagellar hook-basal body complex protein [Oceanospirillum sp.
MED92]
gi|89081348|gb|EAR60580.1| flagellar hook-basal body complex protein [Oceanospirillum sp.
MED92]
Length = 117
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIA 91
S F +L++ G A+ +++A +G + + + +A +
Sbjct: 41 PSDRTGFGEILKNAVDGVSETQADAKKMAVAYEKGDPSVDLPQVMIAAEKASVSFQAMTQ 100
Query: 92 LRDKILSAVSEVSKMQI 108
+R+++++A +V KM I
Sbjct: 101 VRNRLVTAYEDVMKMPI 117
>gi|91792681|ref|YP_562332.1| flagellar hook-basal body complex protein (FliE) [Shewanella
denitrificans OS217]
gi|91714683|gb|ABE54609.1| flagellar hook-basal body complex protein (FliE) [Shewanella
denitrificans OS217]
Length = 113
Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++++Q I+ + T G+R + Q N G+ F LL G + + ++
Sbjct: 8 LLQEMQSLRGEITPSLTNGIRPNMLQQVNNTQGA---DFGQLLSQAVGSVNGLQQNSASL 64
Query: 62 SLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + S+ + V +A ++ +R+K++ A E+ M +
Sbjct: 65 ATRLDMGDTRVSLSDTVIAREKAGVAFEATVQVRNKLVEAYKEIMSMPV 113
>gi|254973911|ref|ZP_05270383.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-66c26]
gi|255091297|ref|ZP_05320775.1| flagellar hook-basal body protein FliE [Clostridium difficile CIP
107932]
gi|255312955|ref|ZP_05354538.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-76w55]
gi|255515714|ref|ZP_05383390.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-97b34]
gi|255648808|ref|ZP_05395710.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-37x79]
gi|260682027|ref|YP_003213312.1| flagellar hook-basal body protein FliE [Clostridium difficile
CD196]
gi|260685625|ref|YP_003216758.1| flagellar hook-basal body protein FliE [Clostridium difficile
R20291]
gi|306518923|ref|ZP_07405270.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-32g58]
gi|260208190|emb|CBA60526.1| flagellar hook-basal body complex protein [Clostridium difficile
CD196]
gi|260211641|emb|CBE01893.1| flagellar hook-basal body complex protein [Clostridium difficile
R20291]
Length = 105
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I QI + IG T N+ EE +F ++ D A++
Sbjct: 1 MPITQINNLMQGAKLDNLIGETKPLTLNNKEE----KKNFEDVIIDTIDKVNFQQVTADD 56
Query: 61 VSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++G+ SM E + +A+ ++ I +R+KI A E++K+QI
Sbjct: 57 MKEKFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI 105
>gi|77457762|ref|YP_347267.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
Pf0-1]
gi|38503179|sp|Q9EYT4|FLIE_PSEFL RecName: Full=Flagellar hook-basal body complex protein FliE
gi|123605486|sp|Q3KG28|FLIE_PSEPF RecName: Full=Flagellar hook-basal body complex protein FliE
gi|12056609|gb|AAG47967.1|AF312695_7 FliE [Pseudomonas fluorescens]
gi|77381765|gb|ABA73278.1| flagellar hook-basal body complex protein FliE [Pseudomonas
fluorescens Pf0-1]
Length = 109
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
++++ + +FS +L + + ++ A GK + + + +A
Sbjct: 26 KSTSAVPEVAGSNFSDMLGQAINKVNDTQQASSQLANAFEIGKSGVDLTDVMIASQKASV 85
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 86 SFQALTQVRNKLVQAYQDIMQMPV 109
>gi|91785610|ref|YP_560816.1| flagellar hook-basal body complex protein FliE [Burkholderia
xenovorans LB400]
gi|91689564|gb|ABE32764.1| Flagellar hook-basal body complex protein FliE [Burkholderia
xenovorans LB400]
Length = 135
Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 18 TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVSLAALQGKTSMREA 75
T ++ G ++P F++ L+ GD KA E+ + S+ +
Sbjct: 43 AAQAAGGSTAVADTSGAATPTGFASALKASLDKISGDQTKAIGESQAFELGASNVSLNDV 102
Query: 76 VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A + +R+K++SA +++ +M +
Sbjct: 103 MVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV 135
>gi|226941279|ref|YP_002796353.1| flagellar hook-basal body protein FliE [Laribacter hongkongensis
HLHK9]
gi|226716206|gb|ACO75344.1| FliE [Laribacter hongkongensis HLHK9]
Length = 109
Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M E I + T+ Q ++ + P+ F+A+LQ ++N
Sbjct: 1 MRTEGIDQLLGELRTVATLASGKPAPQQVAKDA-AEPVDFAAVLQASLDKVAERQAGSQN 59
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G ++ + + + +A + + +R+K++SA ++ Q+
Sbjct: 60 LQQRWELGDENVNLHDVMLSLQKASLSFQTMVQVRNKLVSAYQDIMNTQV 109
>gi|157159221|ref|YP_001463239.1| flagellar hook-basal body protein FliE [Escherichia coli E24377A]
gi|191168294|ref|ZP_03030087.1| flagellar hook-basal body complex protein [Escherichia coli B7A]
gi|166988339|sp|A7ZN60|FLIE_ECO24 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|157081251|gb|ABV20959.1| flagellar hook-basal body complex protein FliE [Escherichia coli
E24377A]
gi|190901666|gb|EDV61422.1| flagellar hook-basal body complex protein [Escherichia coli B7A]
Length = 104
Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISLLQATAMSARAQDSLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|255305271|ref|ZP_05349443.1| flagellar hook-basal body protein FliE [Clostridium difficile ATCC
43255]
Length = 105
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILS 98
F ++ D A+++ ++G+ SM E + +A+ ++ I +R+KI
Sbjct: 36 FEDVIIDTVDKVNFQQVTADDMKEKFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHD 95
Query: 99 AVSEVSKMQI 108
A E++K+QI
Sbjct: 96 AYQEMNKVQI 105
>gi|331005203|ref|ZP_08328597.1| Flagellar hook-basal body complex protein FliE [gamma
proteobacterium IMCC1989]
gi|330420985|gb|EGG95257.1| Flagellar hook-basal body complex protein FliE [gamma
proteobacterium IMCC1989]
Length = 131
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 33/98 (33%), Gaps = 2/98 (2%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--T 70
+ Q+ + F ++ + + ++ A +G+
Sbjct: 34 SPQVERAANPLQSLQDGIKPTSEPSAGFGQIMSQAVNHVDQLHKTSSQLATAYEKGQSGV 93
Query: 71 SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A + + +R+K++ A +V M +
Sbjct: 94 DITDVMIASQKAGVSFQAMLQVRNKMVEAYRDVMNMPV 131
>gi|15802372|ref|NP_288398.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
EDL933]
gi|15831930|ref|NP_310703.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
str. Sakai]
gi|16129884|ref|NP_416447.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
MG1655]
gi|74312477|ref|YP_310896.1| flagellar hook-basal body protein FliE [Shigella sonnei Ss046]
gi|89108769|ref|AP_002549.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
W3110]
gi|168751864|ref|ZP_02776886.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4113]
gi|168758249|ref|ZP_02783256.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4401]
gi|168764440|ref|ZP_02789447.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4501]
gi|168771542|ref|ZP_02796549.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4486]
gi|168777362|ref|ZP_02802369.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
O157:H7 str. EC4196]
gi|168783332|ref|ZP_02808339.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4076]
gi|168790306|ref|ZP_02815313.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC869]
gi|168802282|ref|ZP_02827289.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC508]
gi|170019730|ref|YP_001724684.1| flagellar hook-basal body protein FliE [Escherichia coli ATCC 8739]
gi|170081581|ref|YP_001730901.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
DH10B]
gi|170682525|ref|YP_001743308.1| flagellar hook-basal body protein FliE [Escherichia coli SMS-3-5]
gi|188491837|ref|ZP_02999107.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
53638]
gi|195939242|ref|ZP_03084624.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
str. EC4024]
gi|208810269|ref|ZP_03252145.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4206]
gi|208816697|ref|ZP_03257817.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4045]
gi|208819679|ref|ZP_03259999.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4042]
gi|209396041|ref|YP_002271052.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4115]
gi|215487137|ref|YP_002329568.1| flagellar hook-basal body protein FliE [Escherichia coli O127:H6
str. E2348/69]
gi|217328613|ref|ZP_03444694.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. TW14588]
gi|238901142|ref|YP_002926938.1| flagellar basal-body component [Escherichia coli BW2952]
gi|253773114|ref|YP_003035945.1| flagellar hook-basal body protein FliE [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254793587|ref|YP_003078424.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
str. TW14359]
gi|256017870|ref|ZP_05431735.1| flagellar hook-basal body protein FliE [Shigella sp. D9]
gi|260868530|ref|YP_003234932.1| flagellar basal-body component protein FliE [Escherichia coli
O111:H- str. 11128]
gi|261227568|ref|ZP_05941849.1| flagellar basal-body component [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254608|ref|ZP_05947141.1| flagellar basal-body component protein FliE [Escherichia coli
O157:H7 str. FRIK966]
gi|291283114|ref|YP_003499932.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
O55:H7 str. CB9615]
gi|300923901|ref|ZP_07139916.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
182-1]
gi|300951561|ref|ZP_07165394.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
116-1]
gi|300956548|ref|ZP_07168830.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
175-1]
gi|307312477|ref|ZP_07592111.1| flagellar hook-basal body complex subunit FliE [Escherichia coli W]
gi|312967134|ref|ZP_07781352.1| flagellar hook-basal body complex protein [Escherichia coli
2362-75]
gi|331657983|ref|ZP_08358945.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA206]
gi|67463552|sp|P0A8T5|FLIE_ECOLI RecName: Full=Flagellar hook-basal body complex protein FliE
gi|67463555|sp|P0A8T6|FLIE_ECO57 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|123616923|sp|Q3Z0Q1|FLIE_SHISS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704226|sp|B5YRW4|FLIE_ECO5E RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704229|sp|B1X691|FLIE_ECODH RecName: Full=Flagellar hook-basal body complex protein FliE
gi|254789307|sp|B7USV1|FLIE_ECO27 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|259646000|sp|C4ZQL1|FLIE_ECOBW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|12516041|gb|AAG56952.1|AE005416_6 flagellar biosynthesis; basal-body component, possibly at
(MS-ring)-rod junction [Escherichia coli O157:H7 str.
EDL933]
gi|146000|gb|AAA23800.1| flagellar protein [Escherichia coli]
gi|1736600|dbj|BAA15760.1| flagellar basal-body component [Escherichia coli str. K12 substr.
W3110]
gi|1788247|gb|AAC75004.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
MG1655]
gi|13362144|dbj|BAB36099.1| flagellar hook-basal body complex protein FliE [Escherichia coli
O157:H7 str. Sakai]
gi|73855954|gb|AAZ88661.1| flagellar basal-body component [Shigella sonnei Ss046]
gi|169754658|gb|ACA77357.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
ATCC 8739]
gi|169889416|gb|ACB03123.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
DH10B]
gi|170520243|gb|ACB18421.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
SMS-3-5]
gi|187767406|gb|EDU31250.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
O157:H7 str. EC4196]
gi|188014165|gb|EDU52287.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4113]
gi|188487036|gb|EDU62139.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
53638]
gi|188999253|gb|EDU68239.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4076]
gi|189354882|gb|EDU73301.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4401]
gi|189359731|gb|EDU78150.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4486]
gi|189365571|gb|EDU83987.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4501]
gi|189370188|gb|EDU88604.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC869]
gi|189375709|gb|EDU94125.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC508]
gi|208724785|gb|EDZ74492.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4206]
gi|208731040|gb|EDZ79729.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4045]
gi|208739802|gb|EDZ87484.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4042]
gi|209157441|gb|ACI34874.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. EC4115]
gi|209766888|gb|ACI81756.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
gi|209766890|gb|ACI81757.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
gi|209766892|gb|ACI81758.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
gi|209766894|gb|ACI81759.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
gi|209766896|gb|ACI81760.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
gi|215265209|emb|CAS09599.1| flagellar basal-body component [Escherichia coli O127:H6 str.
E2348/69]
gi|217317960|gb|EEC26387.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
str. TW14588]
gi|222033676|emb|CAP76417.1| flagellar hook-basal body complex protein fliE [Escherichia coli
LF82]
gi|238861093|gb|ACR63091.1| flagellar basal-body component [Escherichia coli BW2952]
gi|253324158|gb|ACT28760.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254592987|gb|ACT72348.1| flagellar basal-body component [Escherichia coli O157:H7 str.
TW14359]
gi|257764886|dbj|BAI36381.1| flagellar basal-body component protein FliE [Escherichia coli
O111:H- str. 11128]
gi|260448950|gb|ACX39372.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
DH1]
gi|281178999|dbj|BAI55329.1| flagellar hook-basal body complex protein FliE [Escherichia coli
SE15]
gi|290762987|gb|ADD56948.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
O55:H7 str. CB9615]
gi|300316648|gb|EFJ66432.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
175-1]
gi|300419864|gb|EFK03175.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
182-1]
gi|300449188|gb|EFK12808.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
116-1]
gi|306907648|gb|EFN38151.1| flagellar hook-basal body complex subunit FliE [Escherichia coli W]
gi|312288598|gb|EFR16500.1| flagellar hook-basal body complex protein [Escherichia coli
2362-75]
gi|312946530|gb|ADR27357.1| flagellar hook-basal body protein FliE [Escherichia coli O83:H1
str. NRG 857C]
gi|315061237|gb|ADT75564.1| flagellar basal-body component [Escherichia coli W]
gi|315136574|dbj|BAJ43733.1| flagellar hook-basal body complex protein fliE [Escherichia coli
DH1]
gi|315296470|gb|EFU55767.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
16-3]
gi|320191910|gb|EFW66557.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
O157:H7 str. EC1212]
gi|320194350|gb|EFW68981.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
WV_060327]
gi|320641785|gb|EFX11173.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
str. G5101]
gi|320647144|gb|EFX15977.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H-
str. 493-89]
gi|320652428|gb|EFX20726.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H-
str. H 2687]
gi|320658030|gb|EFX25792.1| flagellar hook-basal body protein FliE [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320658602|gb|EFX26296.1| flagellar hook-basal body protein FliE [Escherichia coli O55:H7
str. USDA 5905]
gi|320668500|gb|EFX35327.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
str. LSU-61]
gi|323168944|gb|EFZ54624.1| flagellar hook-basal body complex protein [Shigella sonnei 53G]
gi|323180811|gb|EFZ66351.1| flagellar hook-basal body complex protein [Escherichia coli 1180]
gi|323378186|gb|ADX50454.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
KO11]
gi|323940404|gb|EGB36595.1| flagellar hook-basal body complex protein FliE [Escherichia coli
E482]
gi|323948359|gb|EGB44346.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H120]
gi|323961981|gb|EGB57580.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H489]
gi|323968353|gb|EGB63760.1| flagellar hook-basal body complex protein FliE [Escherichia coli
M863]
gi|323977882|gb|EGB72968.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TW10509]
gi|324005865|gb|EGB75084.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
57-2]
gi|326342346|gb|EGD66127.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
O157:H7 str. 1044]
gi|326344851|gb|EGD68598.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
O157:H7 str. 1125]
gi|327253068|gb|EGE64722.1| flagellar hook-basal body complex protein [Escherichia coli
STEC_7v]
gi|330911743|gb|EGH40253.1| flagellar hook-basal body complex protein FliE [Escherichia coli
AA86]
gi|331056231|gb|EGI28240.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA206]
gi|332093106|gb|EGI98170.1| flagellar hook-basal body complex protein [Shigella boydii 5216-82]
Length = 104
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|317181260|dbj|BAJ59046.1| flagellar hook-basal body protein FliE [Helicobacter pylori F32]
Length = 109
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEEGGSS-----PISFSALLQDMAKGAIGDMEKAEN 60
+Q ++ S + EE GS+ FS LL+ E+++
Sbjct: 1 MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDK 60
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + +A I +AE ++ L + +R+K +S E+ + QI
Sbjct: 61 ALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISTYKELLRTQI 109
>gi|54297674|ref|YP_124043.1| flagellar hook-basal body complex protein [Legionella pneumophila
str. Paris]
gi|53751459|emb|CAH12877.1| Flagellar hook-basal body complex protein [Legionella pneumophila
str. Paris]
Length = 104
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 33 GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSI 90
G + SFS++ Q + A+++ G S+ E + ++ ++
Sbjct: 27 SGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSNLGFEATL 86
Query: 91 ALRDKILSAVSEVSKMQI 108
+R+K++ A ++ M +
Sbjct: 87 RVRNKLVQAYQDIMNMPV 104
>gi|142129|gb|AAA64533.1| phycobilisome maturation protein [Synechococcus elongatus PCC 6301]
gi|446764|prf||1912291H phycobilisome maturation protein
Length = 264
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
++ S L +A A+ + + ++AA+ GK + + D +M+ L ++A+
Sbjct: 102 AATQSLGELQATVAVPALLKLLEGGPEAIAAIPGKPHLTQPADAVMETLGQLRATVAV-- 159
Query: 95 KILSAVSE 102
++ A E
Sbjct: 160 PVVQAFLE 167
>gi|30063378|ref|NP_837549.1| flagellar hook-basal body protein FliE [Shigella flexneri 2a str.
2457T]
gi|56480004|ref|NP_707823.2| flagellar hook-basal body protein FliE [Shigella flexneri 2a str.
301]
gi|110642043|ref|YP_669773.1| flagellar hook-basal body protein FliE [Escherichia coli 536]
gi|110805908|ref|YP_689428.1| flagellar hook-basal body protein FliE [Shigella flexneri 5 str.
8401]
gi|117624077|ref|YP_852990.1| flagellar hook-basal body protein FliE [Escherichia coli APEC O1]
gi|161486198|ref|NP_754245.2| flagellar hook-basal body protein FliE [Escherichia coli CFT073]
gi|162138421|ref|YP_541141.2| flagellar hook-basal body protein FliE [Escherichia coli UTI89]
gi|191173295|ref|ZP_03034825.1| flagellar hook-basal body complex protein [Escherichia coli F11]
gi|218558794|ref|YP_002391707.1| flagellar hook-basal body protein FliE [Escherichia coli S88]
gi|218699503|ref|YP_002407132.1| flagellar hook-basal body protein FliE [Escherichia coli IAI39]
gi|300940391|ref|ZP_07154976.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
21-1]
gi|300975550|ref|ZP_07173061.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
45-1]
gi|300994336|ref|ZP_07180867.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
200-1]
gi|301050704|ref|ZP_07197565.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
185-1]
gi|306814240|ref|ZP_07448406.1| flagellar hook-basal body protein FliE [Escherichia coli NC101]
gi|38502954|sp|Q83R35|FLIE_SHIFL RecName: Full=Flagellar hook-basal body complex protein FliE
gi|38503026|sp|Q8FGL1|FLIE_ECOL6 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|122958273|sp|Q0TGQ7|FLIE_ECOL5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|123146946|sp|Q0T3J2|FLIE_SHIF8 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|166214849|sp|A1AC86|FLIE_ECOK1 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704225|sp|B7MCJ3|FLIE_ECO45 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704227|sp|B7NRE7|FLIE_ECO7I RecName: Full=Flagellar hook-basal body complex protein FliE
gi|30041630|gb|AAP17358.1| flagellar hook-basal body 11K protein FliE [Shigella flexneri 2a
str. 2457T]
gi|56383555|gb|AAN43530.2| flagellar hook-basal body 11K protein FliE [Shigella flexneri 2a
str. 301]
gi|110343635|gb|ABG69872.1| flagellar hook-basal body complex protein FliE [Escherichia coli
536]
gi|110615456|gb|ABF04123.1| flagellar hook-basal body complex protein FliE [Shigella flexneri 5
str. 8401]
gi|115513201|gb|ABJ01276.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
APEC O1]
gi|190906412|gb|EDV66021.1| flagellar hook-basal body complex protein [Escherichia coli F11]
gi|218365563|emb|CAR03290.1| flagellar basal-body component [Escherichia coli S88]
gi|218369489|emb|CAR17256.1| flagellar basal-body component [Escherichia coli IAI39]
gi|281601378|gb|ADA74362.1| Flagellar hook-basal body complex protein fliE [Shigella flexneri
2002017]
gi|294491074|gb|ADE89830.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
IHE3034]
gi|300297627|gb|EFJ54012.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
185-1]
gi|300304922|gb|EFJ59442.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
200-1]
gi|300410319|gb|EFJ93857.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
45-1]
gi|300454785|gb|EFK18278.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
21-1]
gi|305852399|gb|EFM52850.1| flagellar hook-basal body protein FliE [Escherichia coli NC101]
gi|307626587|gb|ADN70891.1| flagellar hook-basal body protein FliE [Escherichia coli UM146]
gi|313650157|gb|EFS14570.1| flagellar hook-basal body complex protein [Shigella flexneri 2a
str. 2457T]
gi|315286644|gb|EFU46077.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
110-3]
gi|315290253|gb|EFU49631.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
153-1]
gi|323952430|gb|EGB48303.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H252]
gi|323956333|gb|EGB52076.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H263]
gi|324013491|gb|EGB82710.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
60-1]
gi|332756091|gb|EGJ86444.1| flagellar hook-basal body complex protein [Shigella flexneri
4343-70]
gi|332757268|gb|EGJ87605.1| flagellar hook-basal body complex protein [Shigella flexneri
2747-71]
gi|332757501|gb|EGJ87836.1| flagellar hook-basal body complex protein [Shigella flexneri K-671]
gi|332766673|gb|EGJ96877.1| flagellar hook-basal body complex protein [Shigella flexneri
2930-71]
gi|333017674|gb|EGK36986.1| flagellar hook-basal body complex protein [Shigella flexneri K-304]
Length = 104
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTVARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|329901252|ref|ZP_08272777.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae
bacterium IMCC9480]
gi|327549184|gb|EGF33776.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae
bacterium IMCC9480]
Length = 114
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSM 72
+ + + + F+ L+ G + AE + G K S+
Sbjct: 19 KAAATRPQGGVPVVAADPTAVAKTGFADALKASLDGVNASQKTAEGLGSRFALGDDKVSL 78
Query: 73 REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A ++ +R+K++SA ++ MQI
Sbjct: 79 SDVMISSQKANIGFQATVQVRNKLVSAYQDIMNMQI 114
>gi|15615022|ref|NP_243325.1| flagellar hook-basal body protein FliE [Bacillus halodurans C-125]
gi|38503192|sp|Q9KA31|FLIE_BACHD RecName: Full=Flagellar hook-basal body complex protein FliE
gi|10175079|dbj|BAB06178.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
Length = 102
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDME-KAENVSLAALQGKTSMR 73
T + + + + N+ + +F L + AE L A +
Sbjct: 8 TAPVFLNQANSSSVNKHTPAEAQETFKQALSQAINNVNDLQKVSAEKTELLAKGKIEDLH 67
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +A TL+ ++ +R+K++ A E+ +MQ+
Sbjct: 68 DVMITGQKASITLSATVEIRNKVIEAYQEIMRMQV 102
>gi|39995517|ref|NP_951468.1| flagellar hook-basal body complex protein FliE [Geobacter
sulfurreducens PCA]
gi|39982280|gb|AAR33741.1| flagellar hook-basal body complex protein FliE [Geobacter
sulfurreducens PCA]
gi|298504517|gb|ADI83240.1| flagellar hook-basal body complex protein FliE [Geobacter
sulfurreducens KN400]
Length = 100
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 17 DTIGMRYDFTQNSNEEGG-SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS---- 71
D I Q G + P + +A + + + + S A++G S
Sbjct: 3 DGIESGLGIAQAFPSVTGEAKPGNLAADGGKFFGELVSKVSELQAQSDTAIKGLVSGESK 62
Query: 72 -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + + ++ + +R+K + A EV +MQ+
Sbjct: 63 GLHEVMIAMEKSSISFQFLSQVRNKAVEAYQEVMRMQV 100
>gi|260855912|ref|YP_003229803.1| flagellar basal-body component protein FliE [Escherichia coli
O26:H11 str. 11368]
gi|257754561|dbj|BAI26063.1| flagellar basal-body component protein FliE [Escherichia coli
O26:H11 str. 11368]
gi|323152733|gb|EFZ39005.1| flagellar hook-basal body complex protein [Escherichia coli
EPECa14]
Length = 104
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHATLDRISDTQTAARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|300931148|ref|ZP_07146496.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
187-1]
gi|300461027|gb|EFK24520.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
187-1]
Length = 104
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQDSLPQPSISFAGQLHAALDRISDTQTAARTEAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|219682007|ref|YP_002468391.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|219621740|gb|ACL29896.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|311085814|gb|ADP65896.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
gi|311086387|gb|ADP66468.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|311086967|gb|ADP67047.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311087543|gb|ADP67622.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. JF98 (Acyrthosiphon pisum)]
Length = 98
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 67 QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q TS+ + + ++ ++ ++ L++ +R+KI+SA E+ QI
Sbjct: 57 QSGTSLNDVMINLEKSSISMQLAVQIRNKIVSAYQEIMSQQI 98
>gi|255099414|ref|ZP_05328391.1| flagellar hook-basal body protein FliE [Clostridium difficile
QCD-63q42]
Length = 104
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 45 QDMAKGAIGDME----KAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSA 99
+D+ I + A+++ ++G+ SM E + +A+ ++ I +R+KI A
Sbjct: 36 EDVIIDTIDKVNFQQVTADDMKEKFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDA 95
Query: 100 VSEVSKMQI 108
E++K+QI
Sbjct: 96 YQEMNKVQI 104
>gi|71733829|ref|YP_275542.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123635743|sp|Q48GE1|FLIE_PSE14 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|71554382|gb|AAZ33593.1| flagellar hook-basal body complex protein FliE [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320325113|gb|EFW81182.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329372|gb|EFW85365.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880567|gb|EGH14716.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 109
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEIGKSGVDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|87307390|ref|ZP_01089535.1| probable flagellar hook-basal body complex protein FliE
[Blastopirellula marina DSM 3645]
gi|87290130|gb|EAQ82019.1| probable flagellar hook-basal body complex protein FliE
[Blastopirellula marina DSM 3645]
Length = 99
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 21/102 (20%)
Query: 19 IGMRYDFTQNSNEEGGSSPI--SFSAL----------LQDMAKGAIGDMEKAENVSLAAL 66
I + + G+SP SF+ L +Q A A+ ++
Sbjct: 7 ISPQTILPSHLTRPAGTSPSHESFTNLFMEGFSRVNEMQQQANRAVEQLQTG-------- 58
Query: 67 QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + E + + +A+ L + +R+K+L A E+ ++I
Sbjct: 59 -GEVNPSEVLIAVQKADVEFKLMMQVRNKMLQAYQEIKDIRI 99
>gi|58582223|ref|YP_201239.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58426817|gb|AAW75854.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 171
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTL 86
+ + SFS L+ G ++A +S A G + + Q++
Sbjct: 90 AQGTPATQASSFSETLRSAIGGVNEAQQRAGALSKAFEMGDPNADLARVMVASQQSQVAF 149
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
++ +R++++ A +V M +
Sbjct: 150 RATVEVRNRLVQAYQDVMNMPL 171
>gi|331005468|ref|ZP_08328847.1| hypothetical protein IMCC1989_1987 [gamma proteobacterium IMCC1989]
gi|330420744|gb|EGG95031.1| hypothetical protein IMCC1989_1987 [gamma proteobacterium IMCC1989]
Length = 62
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 53 GDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ KAE G+ + + + +A+ + L++ +R+K+L E+ KMQI
Sbjct: 6 DQINKAEFNVRELAAGRADNLHHVMVSLSKAKLSFELAVEVRNKLLEGYQEIIKMQI 62
>gi|237799233|ref|ZP_04587694.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022088|gb|EGI02145.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 109
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK+ + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASNQLASAFEVGKSGIDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|94968681|ref|YP_590729.1| flagellar hook-basal body complex protein (FliE) [Candidatus
Koribacter versatilis Ellin345]
gi|94550731|gb|ABF40655.1| flagellar hook-basal body complex protein (FliE) [Candidatus
Koribacter versatilis Ellin345]
Length = 96
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQ 81
Q + E F L+ A+ L GK + A I +
Sbjct: 10 SAVGQAWSSEAQGKSSGFLDSLKSAISDVEDQHTDAQTKLANLLTGKGEDVHSAAIAIEK 69
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQ 107
A + L + LR+K ++A EV++MQ
Sbjct: 70 ASLSFELMMQLRNKAVAAYQEVARMQ 95
>gi|307731341|ref|YP_003908565.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1003]
gi|307585876|gb|ADN59274.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1003]
Length = 116
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVS 62
+Q +S + + E G ++ F++ L+ GD KA E+ +
Sbjct: 11 ALQQLHSMAAQAAGGSTAASGAPAAGESGAATAGGFASALKASLDKISGDQTKAIGESQA 70
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ + + + +A + +R+K++SA +++ +MQ+
Sbjct: 71 FELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMQV 116
>gi|82543598|ref|YP_407545.1| flagellar hook-basal body protein FliE [Shigella boydii Sb227]
gi|157161408|ref|YP_001458726.1| flagellar hook-basal body protein FliE [Escherichia coli HS]
gi|193066394|ref|ZP_03047442.1| flagellar hook-basal body complex protein [Escherichia coli E22]
gi|194429922|ref|ZP_03062432.1| flagellar hook-basal body complex protein [Escherichia coli B171]
gi|209919359|ref|YP_002293443.1| flagellar hook-basal body protein FliE [Escherichia coli SE11]
gi|218554517|ref|YP_002387430.1| flagellar hook-basal body protein FliE [Escherichia coli IAI1]
gi|218689932|ref|YP_002398144.1| flagellar hook-basal body protein FliE [Escherichia coli ED1a]
gi|260844336|ref|YP_003222114.1| flagellar basal-body component protein FliE [Escherichia coli
O103:H2 str. 12009]
gi|293446317|ref|ZP_06662739.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B088]
gi|312973847|ref|ZP_07788019.1| flagellar hook-basal body complex protein [Escherichia coli
1827-70]
gi|331653348|ref|ZP_08354353.1| flagellar hook-basal body complex protein FliE [Escherichia coli
M718]
gi|331668627|ref|ZP_08369475.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA271]
gi|331677818|ref|ZP_08378493.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H591]
gi|123559959|sp|Q322P1|FLIE_SHIBS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|166988340|sp|A8A1D9|FLIE_ECOHS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704228|sp|B7M377|FLIE_ECO8A RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704230|sp|B6I0Y4|FLIE_ECOSE RecName: Full=Flagellar hook-basal body complex protein FliE
gi|254789309|sp|B7MWC6|FLIE_ECO81 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|81245009|gb|ABB65717.1| FliE [Shigella boydii Sb227]
gi|157067088|gb|ABV06343.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
HS]
gi|192925979|gb|EDV80625.1| flagellar hook-basal body complex protein [Escherichia coli E22]
gi|194412011|gb|EDX28323.1| flagellar hook-basal body complex protein [Escherichia coli B171]
gi|209912618|dbj|BAG77692.1| flagellar hook-basal body complex protein FliE [Escherichia coli
SE11]
gi|218361285|emb|CAQ98869.1| flagellar basal-body component [Escherichia coli IAI1]
gi|218427496|emb|CAR08392.2| flagellar basal-body component [Escherichia coli ED1a]
gi|257759483|dbj|BAI30980.1| flagellar basal-body component protein FliE [Escherichia coli
O103:H2 str. 12009]
gi|291323147|gb|EFE62575.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B088]
gi|309702226|emb|CBJ01543.1| flagellar hook-basal body complex protein FliE [Escherichia coli
ETEC H10407]
gi|310332442|gb|EFP99677.1| flagellar hook-basal body complex protein [Escherichia coli
1827-70]
gi|320186948|gb|EFW61662.1| Flagellar hook-basal body complex protein FliE [Shigella flexneri
CDC 796-83]
gi|320198626|gb|EFW73226.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
EC4100B]
gi|323158584|gb|EFZ44598.1| flagellar hook-basal body complex protein [Escherichia coli
E128010]
gi|323183921|gb|EFZ69308.1| flagellar hook-basal body complex protein [Escherichia coli 1357]
gi|323186390|gb|EFZ71739.1| flagellar hook-basal body complex protein [Escherichia coli 1357]
gi|323937207|gb|EGB33487.1| flagellar hook-basal body complex protein FliE [Escherichia coli
E1520]
gi|324118986|gb|EGC12875.1| flagellar hook-basal body complex protein FliE [Escherichia coli
E1167]
gi|331049446|gb|EGI21518.1| flagellar hook-basal body complex protein FliE [Escherichia coli
M718]
gi|331063821|gb|EGI35732.1| flagellar hook-basal body complex protein FliE [Escherichia coli
TA271]
gi|331074278|gb|EGI45598.1| flagellar hook-basal body complex protein FliE [Escherichia coli
H591]
gi|332096882|gb|EGJ01871.1| flagellar hook-basal body complex protein [Shigella boydii 3594-74]
Length = 104
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQDSLPQP----TISFAGQLHAALDRISDTQTAARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|333003032|gb|EGK22586.1| flagellar hook-basal body complex protein [Shigella flexneri VA-6]
Length = 104
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + ISF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQP----TISFAGQLHAAIDRISDTQTVARTQA 56
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 57 EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|225619782|ref|YP_002721039.1| putative flagellar hook-basal body protein FliE [Brachyspira
hyodysenteriae WA1]
gi|225214601|gb|ACN83335.1| putative flagellar hook-basal body protein FliE [Brachyspira
hyodysenteriae WA1]
Length = 123
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 14 SHTDTIGMRYDFTQNSNEEGG---------SSPISFSALLQDMAKGAIGDMEKAEN---- 60
+ T +G Y F + + SS + M AI + + +
Sbjct: 15 TRTGNVGDNYGFVLKTTDPRHYGPAQQLRRSSSNDLISNFGTMLSDAIDAVNQKQVDRDN 74
Query: 61 -VSLAALQ-GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVS 104
+ A ++ + + + ++ I +AE +L+ + A+ D+ + A EV+
Sbjct: 75 IIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVIDRAVRAYQEVT 120
>gi|227885635|ref|ZP_04003440.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
83972]
gi|227837208|gb|EEJ47674.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
83972]
gi|307553950|gb|ADN46725.1| flagellar hook-basal body complex protein FliE [Escherichia coli
ABU 83972]
Length = 104
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAELDRISDTQTVARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|291519598|emb|CBK74819.1| Flagellar hook-basal body protein [Butyrivibrio fibrisolvens 16/4]
Length = 103
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 26 TQNSNEEGGSSPISFSALLQDMA-----KGAIGDMEKAENVSLAALQGKTSMREAVDHIM 80
N+ + + F ++L + A+ + E V+L L + + +
Sbjct: 17 VSNTQVKKADNTTGFQSMLDSVMGLLDETNALQKVANREQVALE-LGESDNTHDLMIAEK 75
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+A L ++A+RD+IL A ++ +MQI
Sbjct: 76 KANTALQYTVAVRDRILEAYQQIMQMQI 103
>gi|293415247|ref|ZP_06657890.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B185]
gi|291432895|gb|EFF05874.1| flagellar hook-basal body complex protein FliE [Escherichia coli
B185]
Length = 104
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQPTMSFAGQLHAALDRISDTQTAARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|162533075|ref|NP_791780.3| flagellar hook-basal body complex protein FliE [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28852401|gb|AAO55475.1| flagellar hook-basal body complex protein FliE [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 118
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK+ + + + +
Sbjct: 32 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEVGKSGIDLTDVMISSQK 91
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 92 ASVSFQALTQVRNKLVQAYQDIMQMPV 118
>gi|149188084|ref|ZP_01866379.1| flagellar hook-basal body protein FliE [Vibrio shilonii AK1]
gi|148838072|gb|EDL55014.1| flagellar hook-basal body protein FliE [Vibrio shilonii AK1]
Length = 103
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 15 HTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
H + M + + +F +L G + + ++ + +G +
Sbjct: 7 HNEMQTMMLEAANSKPAANAHQVGANFGDMLSQAVNNVNGLQKSSGDLQMRFDRGDADVS 66
Query: 74 --EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + ++ +I +R+K++ A E+ M +
Sbjct: 67 LSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
>gi|146282930|ref|YP_001173083.1| flagellar hook-basal body protein FliE [Pseudomonas stutzeri A1501]
gi|166214855|sp|A4VMP0|FLIE_PSEU5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|145571135|gb|ABP80241.1| flagellar hook-basal body complex protein FliE [Pseudomonas
stutzeri A1501]
gi|327481270|gb|AEA84580.1| flagellar hook-basal body protein FliE [Pseudomonas stutzeri DSM
4166]
Length = 109
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAE--NVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
SFS +L + + + QG + E + +A + +R
Sbjct: 35 GAPSFSDMLGQAVNKVHETQQVSSQLASAFEMGQGGVDLTEVMIASQKASVSFQAMTQVR 94
Query: 94 DKILSAVSEVSKMQI 108
+K++ A ++ +M +
Sbjct: 95 NKLVQAYQDIMQMPV 109
>gi|15616694|ref|NP_239906.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|219681451|ref|YP_002467836.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|257471126|ref|ZP_05635125.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|11386781|sp|P57174|FLIE_BUCAI RecName: Full=Flagellar hook-basal body complex protein FliE
gi|25403535|pir||H84937 flagellar hook-basal body complex protein fliE [imported] -
Buchnera sp. (strain APS)
gi|10038757|dbj|BAB12792.1| flagellar hook-basal body complex protein fliE [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|219624294|gb|ACL30449.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
Length = 98
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 67 QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
Q S+ + + ++ ++ ++ L++ +R+KI+SA E+ QI
Sbjct: 57 QSGISLNDVMINLEKSSISMQLAVQIRNKIVSAYQEIMSQQI 98
>gi|194434950|ref|ZP_03067193.1| flagellar hook-basal body complex protein [Shigella dysenteriae
1012]
gi|194416785|gb|EDX32911.1| flagellar hook-basal body complex protein [Shigella dysenteriae
1012]
gi|332095485|gb|EGJ00501.1| flagellar hook-basal body complex protein [Shigella dysenteriae
155-74]
Length = 104
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTAARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L+ + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LS--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|170722858|ref|YP_001750546.1| flagellar hook-basal body protein FliE [Pseudomonas putida W619]
gi|226704238|sp|B1JC95|FLIE_PSEPW RecName: Full=Flagellar hook-basal body complex protein FliE
gi|169760861|gb|ACA74177.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
W619]
Length = 110
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+ E SF+ +L + + ++ A GK + + + +A
Sbjct: 27 ATAAPELAEGQSSFADMLGQAIGKVHQTQQASTQLANAFEIGKSGVDLTDVMIASQKASV 86
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
++ +R+K++ A ++ +M +
Sbjct: 87 SMQALTQVRNKLVQAYQDIMQMPV 110
>gi|289678990|ref|ZP_06499880.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
syringae FF5]
gi|302185563|ref|ZP_07262236.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
syringae 642]
gi|330940718|gb|EGH43726.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330972434|gb|EGH72500.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 109
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEVGKSGVDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|323496556|ref|ZP_08101610.1| flagellar hook-basal body protein FliE [Vibrio sinaloensis DSM
21326]
gi|323318400|gb|EGA71357.1| flagellar hook-basal body protein FliE [Vibrio sinaloensis DSM
21326]
Length = 103
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
+ F S + T+ + G + F LL + + + N+ + +G
Sbjct: 3 IDGFQSEMQAMMFEAGNTKPAAT-GQTVGADFGELLNNAINNVNSLSKASGNLQMRFDRG 61
Query: 69 K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ + + ++ +I +R+K++ A E+ M +
Sbjct: 62 DENVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
>gi|117919789|ref|YP_868981.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
ANA-3]
gi|117612121|gb|ABK47575.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
ANA-3]
Length = 112
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++++Q I + I Q +N G F LL G + N+
Sbjct: 8 LLQEMQSLQGEIKPSFGISPNNIVQQVNNTSGA----DFGQLLSQAIGNVSGLQSTSSNL 63
Query: 62 SLAALQGKT--SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S G T S+ + V +A ++ +R+K++ A E+ M +
Sbjct: 64 STRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112
>gi|330502762|ref|YP_004379631.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina
NK-01]
gi|328917048|gb|AEB57879.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina
NK-01]
Length = 109
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+ + E SFS +L + + ++ A G+ + + + +A
Sbjct: 26 KPAASEPVQGAPSFSEMLGQAVNKVNETQQASNKLATAFEMGQSGVDLTDVMIASQKASV 85
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 86 SFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|303326605|ref|ZP_07357047.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
3_1_syn3]
gi|302862593|gb|EFL85525.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
3_1_syn3]
Length = 148
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
+ +T G + DF + +++ +P++ S D KG++ + + ++ A+ S
Sbjct: 50 VDKGETFGAQADFIRYPDQQ--HTPVTPSNSFGDTIKGSLNKVNELQSAKAQAIDDFASG 107
Query: 72 -MREAVDHIMQAERT---LNLSIALRDKILSAVSEVSKMQ 107
+ + ++ +++ + L+ A+R K+L A E+SKMQ
Sbjct: 108 RSQNVHELMITMQKSSLAMKLTSAVRGKVLEAYKEISKMQ 147
>gi|257484921|ref|ZP_05638962.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289627783|ref|ZP_06460737.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651626|ref|ZP_06482969.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298487836|ref|ZP_07005876.1| Flagellar hook-basal body complex protein fliE [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298157561|gb|EFH98641.1| Flagellar hook-basal body complex protein fliE [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330866443|gb|EGH01152.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330889062|gb|EGH21723.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
mori str. 301020]
gi|330953747|gb|EGH54007.1| flagellar hook-basal body protein FliE [Pseudomonas syringae Cit 7]
gi|331011062|gb|EGH91118.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 109
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEIGKSGVDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|213967562|ref|ZP_03395710.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tomato T1]
gi|301385733|ref|ZP_07234151.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tomato Max13]
gi|302059422|ref|ZP_07250963.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tomato K40]
gi|302134813|ref|ZP_07260803.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|38502974|sp|Q884X9|FLIE_PSESM RecName: Full=Flagellar hook-basal body complex protein FliE
gi|213927863|gb|EEB61410.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
tomato T1]
gi|330876009|gb|EGH10158.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967110|gb|EGH67370.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331017005|gb|EGH97061.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 109
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK+ + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEVGKSGIDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|26991059|ref|NP_746484.1| flagellar hook-basal body protein FliE [Pseudomonas putida KT2440]
gi|148546736|ref|YP_001266838.1| flagellar hook-basal body protein FliE [Pseudomonas putida F1]
gi|167034926|ref|YP_001670157.1| flagellar hook-basal body protein FliE [Pseudomonas putida GB-1]
gi|325273532|ref|ZP_08139765.1| flagellar hook-basal body protein FliE [Pseudomonas sp. TJI-51]
gi|38502976|sp|Q88ET3|FLIE_PSEPK RecName: Full=Flagellar hook-basal body complex protein FliE
gi|166214854|sp|A5W0J4|FLIE_PSEP1 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189044493|sp|B0KQZ5|FLIE_PSEPG RecName: Full=Flagellar hook-basal body complex protein FliE
gi|24986092|gb|AAN69948.1|AE016633_6 flagellar hook-basal body complex protein FliE [Pseudomonas putida
KT2440]
gi|148510794|gb|ABQ77654.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
F1]
gi|166861414|gb|ABY99821.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
GB-1]
gi|313497795|gb|ADR59161.1| FliE [Pseudomonas putida BIRD-1]
gi|324101333|gb|EGB98946.1| flagellar hook-basal body protein FliE [Pseudomonas sp. TJI-51]
Length = 110
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERT 85
+ E +F+ +L + + ++ A GK + + + +A +
Sbjct: 28 TAAPELAPGQSTFADMLGQAIGKVHETQQASTQLANAFEIGKSGVDLTDVMIASQKASVS 87
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 88 MQAMTQVRNKLVQAYQDIMQMPV 110
>gi|317011793|gb|ADU85540.1| flagellar hook-basal body protein FliE [Helicobacter pylori
SouthAfrica7]
Length = 109
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
++S+ FS LL+ E+++ G+ + +A I +AE +
Sbjct: 27 ESSSAFKEQKGGEFSKLLKQSINELNSTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
+ L + +R+K +SA E+ + QI
Sbjct: 87 MKLMLEVRNKAISAYKELLRTQI 109
>gi|237731984|ref|ZP_04562465.1| flagellar hook-basal body protein FliE [Citrobacter sp. 30_2]
gi|226907523|gb|EEH93441.1| flagellar hook-basal body protein FliE [Citrobacter sp. 30_2]
Length = 104
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSAKMQDMQPQPTVSFAGQLHAALDRISDVQTASRTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K++SA EV MQ+
Sbjct: 61 LG--EPGIALNDVMTDMQKASVSMQMGIQVRNKLVSAYQEVMSMQV 104
>gi|298345989|ref|YP_003718676.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
ATCC 43063]
gi|298236050|gb|ADI67182.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
ATCC 43063]
Length = 128
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP----------ISFSALLQDMAKGA 51
+++ + + S + + + + + G +P SF + D
Sbjct: 11 LVQSLGFSRSAATQAGPARLGTNASSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNM 70
Query: 52 IGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
A+ + + AL G+ + + +++ T+ L+ +R+K + +E+ +MQ
Sbjct: 71 QQRESTAKKLGVQALTGQLNDVHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 127
>gi|56750503|ref|YP_171204.1| phycobilisome maturation protein CpcE [Synechococcus elongatus PCC
6301]
gi|81299863|ref|YP_400071.1| HEAT repeat-containing PBS lyase [Synechococcus elongatus PCC 7942]
gi|93141245|sp|Q44115|CPCE_SYNE7 RecName: Full=Phycocyanobilin lyase subunit alpha; AltName:
Full=Phycocyanin operon protein CpcE
gi|56685462|dbj|BAD78684.1| phycobilisome maturation protein CpcE [Synechococcus elongatus PCC
6301]
gi|81168744|gb|ABB57084.1| PBS lyase HEAT-like repeat [Synechococcus elongatus PCC 7942]
Length = 273
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
++ S L +A A+ + + ++AA+ GK + + D +M+ L ++A+
Sbjct: 102 AATQSLGELQATVAVPALLKLLEGGPEAIAAIPGKPHLTQPADAVMETLGQLRATVAV-- 159
Query: 95 KILSAVSE 102
++ A E
Sbjct: 160 PVVQAFLE 167
>gi|259907605|ref|YP_002647961.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
Ep1/96]
gi|224963227|emb|CAX54711.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
Ep1/96]
gi|283477447|emb|CAY73363.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
DSM 12163]
gi|310764889|gb|ADP09839.1| Flagellar hook-basal body complex protein FliE [Erwinia sp. Ejp617]
Length = 110
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 2/101 (1%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
S I +F N +FS L + + A+ + + + G
Sbjct: 9 IGQMHSQAQKISAPDEFLSNGKLTSLGGGPNFSDALFNSINEINKSQQTAKAQTQSWMSG 68
Query: 69 KTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ + + + + ++ + + LR+K+LSA EV M
Sbjct: 69 SSDIGLNDVMLSLQKSSVAFSFGVQLRNKMLSAYQEVMNMP 109
>gi|330899424|gb|EGH30843.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330975996|gb|EGH76062.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 109
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK + + + +
Sbjct: 23 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLASAFEVGKSGVDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|116049029|ref|YP_792169.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
UCBPP-PA14]
gi|254239469|ref|ZP_04932791.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa 2192]
gi|122258137|sp|Q02IR7|FLIE_PSEAB RecName: Full=Flagellar hook-basal body complex protein FliE
gi|115584250|gb|ABJ10265.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126192847|gb|EAZ56910.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa 2192]
Length = 109
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ + SFS +L + + ++ A G+ + + + +A
Sbjct: 25 AKPVQAPAEAGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKAS 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 85 VSFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|326796471|ref|YP_004314291.1| flagellar hook-basal body complex protein fliE [Marinomonas
mediterranea MMB-1]
gi|326547235|gb|ADZ92455.1| Flagellar hook-basal body complex protein fliE [Marinomonas
mediterranea MMB-1]
Length = 121
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
M EQ+Q + + ++ + N+ + FS +L+ + + A +
Sbjct: 18 MREQVQSPSDSFNRVNSQD-----GLSVNDVTSADKSEFSDMLKQAIDQVNSNQKAATAL 72
Query: 62 SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A +G + E + + ++ + +R+K++ A ++ M +
Sbjct: 73 AQAYERGDPNVDLPEVMIGLQKSSISFEAMTQVRNKLVDAYEKIMNMPV 121
>gi|251772445|gb|EES53012.1| flagellar hook-basal body complex subunit FliE [Leptospirillum
ferrodiazotrophum]
Length = 103
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+ S S +F +L+D +A+ G+ ++ + + + QA+
Sbjct: 20 EESPTPSHSGEENFVNVLKDSIARVNSLQNEADKTIQDFSTGQNGVTLHQTMIEMAQADI 79
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +L + +RD+I+ A E+ M +
Sbjct: 80 SFHLMMQVRDRIVKAYQEMENMPL 103
>gi|207109106|ref|ZP_03243268.1| flagellar hook-basal body protein FliE [Helicobacter pylori
HPKX_438_CA4C1]
Length = 82
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
FS LL+ E+++ G+ + +A I +AE ++ L + +R+K +S
Sbjct: 13 FSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAIS 72
Query: 99 AVSEVSKMQI 108
A E+ + QI
Sbjct: 73 AYKELLRTQI 82
>gi|66046687|ref|YP_236528.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
syringae B728a]
gi|63257394|gb|AAY38490.1| Flagellar hook-basal body complex protein FliE [Pseudomonas
syringae pv. syringae B728a]
Length = 111
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
+ + + SF+ +L + + ++ A GK + + + +
Sbjct: 25 SAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEVGKSGVDLTDVMISSQK 84
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 85 ASVSFQALTQVRNKLVQAYQDIMQMPV 111
>gi|27365279|ref|NP_760807.1| flagellar hook-basal body protein FliE [Vibrio vulnificus CMCP6]
gi|161486614|ref|NP_935275.2| flagellar hook-basal body protein FliE [Vibrio vulnificus YJ016]
gi|320155663|ref|YP_004188042.1| flagellar hook-basal body complex protein FliE [Vibrio vulnificus
MO6-24/O]
gi|27361426|gb|AAO10334.1| flagellar hook-basal body complex protein (FliE) [Vibrio vulnificus
CMCP6]
gi|319930975|gb|ADV85839.1| flagellar hook-basal body complex protein FliE [Vibrio vulnificus
MO6-24/O]
Length = 103
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Query: 21 MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR--EAVDH 78
M + G FS LL + + ++ +G + + +
Sbjct: 14 MLEASNTTAPATGAKVSADFSTLLNQAINNVNSLQKSSSDLQTRFDRGDADVSLSDVMIA 73
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ ++ +R+K++ A ++ M +
Sbjct: 74 RNKSSVAFEATVQVRNKLVEAYKDLMNMPV 103
>gi|157164609|ref|YP_001467065.1| flagellar hook-basal body protein FliE [Campylobacter concisus
13826]
gi|112800439|gb|EAT97783.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
concisus 13826]
Length = 97
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKIL 97
F L D K A+ G+ + +A I +AE ++ L + +R+K L
Sbjct: 27 GFENALNDSLKELNKVQINADKAIADLATGEVKDLHQAAIAIGKAETSMKLMLEIRNKAL 86
Query: 98 SAVSEVSKMQI 108
SA E+S+ QI
Sbjct: 87 SAYKEISRTQI 97
>gi|254437554|ref|ZP_05051048.1| flagellar hook-basal body complex protein FliE [Octadecabacter
antarcticus 307]
gi|198253000|gb|EDY77314.1| flagellar hook-basal body complex protein FliE [Octadecabacter
antarcticus 307]
Length = 113
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++QI +S I+ TD I + T+ + P D + ++ + +A+
Sbjct: 3 VLDQINSISS-INATDAINRAKEMTEQAAGGAILGPRDEGPSFGDRMRDSLDSVARAQGD 61
Query: 62 SLAALQGKTSMREA-VDHIMQAERT----LNLSIALRDKILSAVSEVSKMQI 108
+ ++ + +E + +M A++ L++ +R+K LSA ++ M +
Sbjct: 62 AAQLVKDYETGKETDLTKVMVAQQVSSLGFQLTLNVRNKALSAYRDIMNMPV 113
>gi|152984357|ref|YP_001349625.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa PA7]
gi|166214853|sp|A6V990|FLIE_PSEA7 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|150959515|gb|ABR81540.1| flagellar hook-basal body complex protein (FliE) [Pseudomonas
aeruginosa PA7]
Length = 109
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ + SFS +L + + ++ A G+ + + + +A
Sbjct: 25 AKPVQAPAEAGAPSFSEMLSQAVGKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKAS 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 85 VSFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|49080000|gb|AAT49958.1| PA1100 [synthetic construct]
Length = 110
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ SFS +L + + ++ A G+ + + + +A
Sbjct: 25 AKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKAS 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 85 VSFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|330986488|gb|EGH84591.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 109
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 24 DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
++ + + SF+ +L + + ++ A GK + + + +
Sbjct: 23 SAPKSVSGAQEAGASSFADMLGQAVNKVAQTQQASSQLANAFEIGKSGVDLTDVMISSQK 82
Query: 82 AERTLNLSIALRDKILSAVSEVSKMQI 108
A + +R+K++ A ++ +M +
Sbjct: 83 ASVSFQALTQVRNKLVQAYQDIMQMPV 109
>gi|114046854|ref|YP_737404.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
MR-7]
gi|113888296|gb|ABI42347.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
MR-7]
Length = 112
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++++Q I + I Q +N G F LL G + N+
Sbjct: 8 LLQEMQSLQGEIKPSFGISPNNIVQQVNNTSGA----DFGQLLSQAIGNVSGLQSTSSNL 63
Query: 62 SLAALQGKT--SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G T S+ + V +A ++ +R+K++ A E+ M +
Sbjct: 64 ATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112
>gi|226944513|ref|YP_002799586.1| flagellar hook-basal body complex protein [Azotobacter vinelandii
DJ]
gi|226719440|gb|ACO78611.1| flagellar hook-basal body complex protein [Azotobacter vinelandii
DJ]
Length = 108
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
G + + +P SF+ L+ + A + S A G+ ++ + +
Sbjct: 17 AGQAAGASAPGPQPAELAPGSFAGELRAAIHRINHLQQTASDSSDAFQAGEPGVALNDVM 76
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A + + +R++++SA EV MQI
Sbjct: 77 VDMQKASVAFQMGVQVRNRLVSAYKEVMNMQI 108
>gi|283832669|ref|ZP_06352410.1| flagellar hook-basal body complex protein FliE [Citrobacter youngae
ATCC 29220]
gi|291072343|gb|EFE10452.1| flagellar hook-basal body complex protein FliE [Citrobacter youngae
ATCC 29220]
Length = 104
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG I M + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVIGQLQATAMSAKMQDVQPQPTVSFAGQLHAALDRISDVQTASRVQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K++SA EV MQ+
Sbjct: 61 LG--EPGIALNDVMTDMQKASVSMQMGIQVRNKLVSAYQEVMSMQV 104
>gi|146312174|ref|YP_001177248.1| flagellar hook-basal body protein FliE [Enterobacter sp. 638]
gi|166988341|sp|A4WBW7|FLIE_ENT38 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|145319050|gb|ABP61197.1| flagellar hook-basal body complex subunit FliE [Enterobacter sp.
638]
Length = 104
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG IS M T ++ + ISF+ L A +
Sbjct: 2 AIQGIEGVISQLQATAMTARNTSVADTQ---PEISFAGQLHAALDRISDTQNAARTQAEK 58
Query: 65 ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + ++ +L + I +R+K+++A E+ MQ+
Sbjct: 59 FTLGEPGVALNDVMTDLQKSSVSLQMGIQVRNKLVTAYQEMMSMQV 104
>gi|291277451|ref|YP_003517223.1| putative flagellar hook-basal body complex protein [Helicobacter
mustelae 12198]
gi|290964645|emb|CBG40499.1| putative flagellar hook-basal body complex protein [Helicobacter
mustelae 12198]
Length = 101
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
+ D +++ + S FS LL+ E ++ + G+ + +A I
Sbjct: 14 QVDQKASASVKKTSDSNDFSKLLKKSIDELNQAQESSDKALVDMATGQIKDLHQAAIAIG 73
Query: 81 QAERTLNLSIALRDKILSAVSEVSKMQI 108
+AE ++ L + +R+K +SA E+ + Q+
Sbjct: 74 RAETSMKLMLEVRNKAISAYKEILRTQV 101
>gi|333004040|gb|EGK23574.1| flagellar hook-basal body complex protein [Shigella flexneri K-272]
gi|333017813|gb|EGK37120.1| flagellar hook-basal body complex protein [Shigella flexneri K-227]
Length = 104
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTVARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A ++ + I +R+K+++ EV MQ+
Sbjct: 61 LG--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAVYQEVMSMQV 104
>gi|157145270|ref|YP_001452589.1| flagellar hook-basal body protein FliE [Citrobacter koseri ATCC
BAA-895]
gi|157082475|gb|ABV12153.1| hypothetical protein CKO_01007 [Citrobacter koseri ATCC BAA-895]
Length = 104
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG IS M + +SF+ L A +
Sbjct: 1 MSAIQGIEGVISQLQATAMSARAQDALPQP----TVSFAGQLHAALNRISDTQTTARVQA 56
Query: 63 LAALQGKTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + + + + +A ++ + I +R+K++SA EV MQ+
Sbjct: 57 EKFTLGEPGIALNDVMTDMQKASVSMQMGIQVRNKLMSAYQEVMSMQV 104
>gi|288553066|ref|YP_003425001.1| flagellar hook-basal body protein FliE [Bacillus pseudofirmus OF4]
gi|288544226|gb|ADC48109.1| flagellar hook-basal body protein FliE [Bacillus pseudofirmus OF4]
Length = 102
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+G++ + E G + + + +Q++ + K E ++ + ++ + +
Sbjct: 16 LGVQNQPLKTPAEAGETFKAALTEAVQEVNELQNVSAMKTEQLARGEID---NLHDVMIT 72
Query: 79 IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A L ++ +R+K++ + E+ +MQ+
Sbjct: 73 GQKASVALQATVEIRNKVIESYQEIMRMQV 102
>gi|261344119|ref|ZP_05971763.1| flagellar hook-basal body complex protein FliE [Providencia
rustigianii DSM 4541]
gi|282567710|gb|EFB73245.1| flagellar hook-basal body complex protein FliE [Providencia
rustigianii DSM 4541]
Length = 103
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQ +S + + + T ++ P+ F+ L + I ++ ++
Sbjct: 2 TIQAIEGVVSQLNVVATQA--TNHAKPVID--PVGFADHLV-ASVNQINEVRTKSTQNVQ 56
Query: 65 AL---QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ S+ + + + +A +L + I +R+K+++A E+ M +
Sbjct: 57 DFTMGKPDLSLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEIMSMPV 103
>gi|254506893|ref|ZP_05119032.1| flagellar hook-basal body complex protein FliE [Vibrio
parahaemolyticus 16]
gi|219550178|gb|EED27164.1| flagellar hook-basal body complex protein FliE [Vibrio
parahaemolyticus 16]
Length = 103
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
+ F S + T+ + G + F LL + + + ++ +G
Sbjct: 3 IDGFQSEMQAMMFEAGNTKPAVT-GHTVGADFGELLNNAINNVNSLSKASGDLQTRFDRG 61
Query: 69 K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ + + ++ +I +R+K++ A E+ M +
Sbjct: 62 DENVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
>gi|15596297|ref|NP_249791.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
PAO1]
gi|107100551|ref|ZP_01364469.1| hypothetical protein PaerPA_01001576 [Pseudomonas aeruginosa PACS2]
gi|218892936|ref|YP_002441805.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
LESB58]
gi|296390534|ref|ZP_06880009.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
PAb1]
gi|313106061|ref|ZP_07792320.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa 39016]
gi|12230923|sp|Q51462|FLIE_PSEAE RecName: Full=Flagellar hook-basal body complex protein FliE
gi|226704237|sp|B7UX89|FLIE_PSEA8 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|9947017|gb|AAG04489.1|AE004540_9 flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa PAO1]
gi|218773164|emb|CAW28976.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa LESB58]
gi|310878822|gb|EFQ37416.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa 39016]
Length = 109
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
+ SFS +L + + ++ A G+ + + + +A
Sbjct: 25 AKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKAS 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 85 VSFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|309388816|gb|ADO76696.1| flagellar hook-basal body complex subunit FliE [Halanaerobium
praevalens DSM 2228]
Length = 98
Score = 35.1 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRD 94
S +FS L + + ++ V+ + G+T + + + +A+ +NL+ A++
Sbjct: 25 SSKAFSDLFKQKLSEVNQLQKDSQAVTASFAAGETDNIHDVMIAAEKAKIGVNLTTAVQT 84
Query: 95 KILSAVSEVSKMQI 108
K++ A +E+ ++Q+
Sbjct: 85 KVIDAYNEIMRLQV 98
>gi|311105961|ref|YP_003978814.1| flagellar hook-basal body complex protein FliE [Achromobacter
xylosoxidans A8]
gi|310760650|gb|ADP16099.1| flagellar hook-basal body complex protein FliE [Achromobacter
xylosoxidans A8]
Length = 110
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAK--GAIGDMEKA 58
M + + G S + T+ + + + E P F+A LQ + + + A
Sbjct: 1 MAVSGLSGIESMLQQMRTVVSKAETGNLAAGEMVGQPDGFAAELQRSIRRVTSAQNAATA 60
Query: 59 ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + S+ + + + +A ++ +R+K+++A E+S M +
Sbjct: 61 QAKAFELGAPDISLNDVMIDMQKASIGFQTAVQVRNKLVAAYKEISSMAV 110
>gi|7387663|sp|P95713|FLIE_SHIBO RecName: Full=Flagellar hook-basal body complex protein FliE
gi|1772455|dbj|BAA14026.1| FliE [Shigella boydii]
Length = 104
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ IQG I M ++ + S A L ++ +AE +
Sbjct: 1 MSAIQGIEGVIIQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTAARTQAEKFT 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L+ + ++ + + + +A ++ + I +R+K+++A EV MQ+
Sbjct: 61 LS--EPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104
>gi|323491445|ref|ZP_08096629.1| flagellar hook-basal body protein FliE [Vibrio brasiliensis LMG
20546]
gi|323314314|gb|EGA67394.1| flagellar hook-basal body protein FliE [Vibrio brasiliensis LMG
20546]
Length = 103
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
+ F S + T+ + G + F +L + + N+ + +
Sbjct: 2 RIDGFQSEMQAMMFEAGGTKPTAT-GQTVGADFGQMLNSAINNVNSLSKTSGNLQMRFDR 60
Query: 68 GKTSMR--EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + + + ++ + +I +R+K++ A E+ M +
Sbjct: 61 GDADVSLSDVMIARNKSSVAFDATIQVRNKLVEAYKELMNMPV 103
>gi|126665016|ref|ZP_01735999.1| flagellar hook-basal body complex protein (FliE) [Marinobacter sp.
ELB17]
gi|126630386|gb|EBA01001.1| flagellar hook-basal body complex protein (FliE) [Marinobacter sp.
ELB17]
Length = 122
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALR 93
SFS++L + A ++ A G+ + + ++ + +R
Sbjct: 48 GTASFSSMLGQAVGNVADAQKTAGDLRTAYDMGEPNVDITRVMIAAQKSSVSFEALTQVR 107
Query: 94 DKILSAVSEVSKMQI 108
++++ A ++ M +
Sbjct: 108 NRVVKAYEDIMNMPV 122
>gi|45436239|gb|AAS61795.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
biovar Microtus str. 91001]
gi|262361813|gb|ACY58534.1| flagellar basal body protein [Yersinia pestis D106004]
Length = 123
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+QG + ++ + + A + +++ A+N L
Sbjct: 22 SVQGIEGVLQQLQVTALQASGSAKTLPAEAGFASELKAAIGKISENQQVARTSAQNFEL- 80
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + + + + ++ +L L I +R+K+++A EV M +
Sbjct: 81 GVPG-VGLNDVMVNAQKSSVSLQLGIQVRNKLVAAYQEVMNMGV 123
>gi|21672358|ref|NP_660425.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25008479|sp|Q8KA46|FLIE_BUCAP RecName: Full=Flagellar hook-basal body complex protein FliE
gi|21622962|gb|AAM67636.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 101
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
F L +++ + E + S+ + + ++ ++ ++ L+I +R++I+SA
Sbjct: 35 FQKALGEISNIQNNSKKNIEK--FQSNHSDISLNDIMINLQKSSISIELAIQVRNRIISA 92
Query: 100 VSEVSKMQI 108
E+ QI
Sbjct: 93 YKEIMNQQI 101
>gi|261855053|ref|YP_003262336.1| flagellar hook-basal body complex subunit FliE [Halothiobacillus
neapolitanus c2]
gi|261835522|gb|ACX95289.1| flagellar hook-basal body complex subunit FliE [Halothiobacillus
neapolitanus c2]
Length = 113
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M ++QI + + + SFS+LL + +
Sbjct: 5 MSVDQILSQMRVMRQ-EATQRLAQPASVPPTVSPAGGDSFSSLLTKAIGQVNDLQQNSSQ 63
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + + + +A N ++ +R++++ A ++ M +
Sbjct: 64 LKTRFELGDPNVDLTQVMLASQKASLGFNATLQVRNRLVQAYQDIMNMPV 113
>gi|296274008|ref|YP_003656639.1| flagellar hook-basal body complex subunit FliE [Arcobacter
nitrofigilis DSM 7299]
gi|296098182|gb|ADG94132.1| flagellar hook-basal body complex subunit FliE [Arcobacter
nitrofigilis DSM 7299]
Length = 100
Score = 35.1 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
E + SF+++L++ GK +++EAV I +AE TL
Sbjct: 19 QKTNENENQGESFASMLKNAVNEVNNTQVDGYKAMENIATGKVENLQEAVSKIEEAEMTL 78
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
L++ +++K ++ +V MQ+
Sbjct: 79 KLALEVKNKAMAGFKQVMSMQV 100
>gi|157371186|ref|YP_001479175.1| flagellar hook-basal body complex subunit FliE [Serratia
proteamaculans 568]
gi|166988342|sp|A8GG07|FLIE_SERP5 RecName: Full=Flagellar hook-basal body complex protein FliE
gi|157322950|gb|ABV42047.1| flagellar hook-basal body complex subunit FliE [Serratia
proteamaculans 568]
Length = 104
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG + ++ + + +SF++ L+ + A +
Sbjct: 2 AIQGIEGVLQQLQATAIQAG---QMDRGAAAPGVSFASELKTAIGKISDTQQAARKQAQD 58
Query: 65 ALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G S+ + + + ++ +L + + +R+K++SA EV M +
Sbjct: 59 FEIGVPGISLNDVLVDLQKSSISLQMGVQVRNKLVSAYQEVMNMAV 104
>gi|284989557|ref|YP_003408111.1| flagellar hook-basal body complex subunit FliE [Geodermatophilus
obscurus DSM 43160]
gi|284062802|gb|ADB73740.1| flagellar hook-basal body complex subunit FliE [Geodermatophilus
obscurus DSM 43160]
Length = 109
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
+S D Q + G+ F+++L + ++ +++ A G
Sbjct: 17 LSGVTGAAATPDAAQTT----GADDNGFASVLVSSVEELQAKQSTSDGLAVQAATGDLRD 72
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + +A+ + + +++K + A +E+ +M +
Sbjct: 73 VHDYMIAANEAKLATEMVVTIKNKAVEAFNEIMRMPV 109
>gi|134095074|ref|YP_001100149.1| flagellar hook-basal body protein FliE [Herminiimonas
arsenicoxydans]
gi|133738977|emb|CAL62025.1| Flagellar hook-basal body complex protein FliE [Herminiimonas
arsenicoxydans]
Length = 119
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 28 NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR--EAVDHIMQAERT 85
S E ++ + FS L+ A+ + G S+ + + + +A +
Sbjct: 37 ASPVEKSATKVDFSQALKASLDNVASAQNHADKLGQKFTLGDDSVNLSDVMISMQKASIS 96
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
++ +R+K++SA E+ MQ+
Sbjct: 97 FQATVQMRNKVVSAYQEIMNMQV 119
>gi|76809519|ref|YP_331832.1| flagellar hook-basal body complex protein [Burkholderia
pseudomallei 1710b]
gi|76578972|gb|ABA48447.1| flagellar hook-basal body complex protein [Burkholderia
pseudomallei 1710b]
Length = 175
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 24/51 (47%)
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E + S+ + + + +A + +R+K++SA +E+ +M +
Sbjct: 125 GEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 175
>gi|198414216|ref|XP_002119619.1| PREDICTED: zinc finger protein [Ciona intestinalis]
Length = 1968
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 32/99 (32%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
+ + + + + E SS A+ A+ E S A
Sbjct: 668 SSATITKAVSSATTTEALSSATTTEAVSSATITEAVSSATTTEAVSSATTTEAASSAKTT 727
Query: 68 GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
S + A T +S A K++S+ +E +K+
Sbjct: 728 EAVSSATTTEAASSATTTEAVSSATTTKVVSSATETNKI 766
>gi|189426354|ref|YP_001953531.1| flagellar hook-basal body complex subunit FliE [Geobacter lovleyi
SZ]
gi|254789310|sp|B3EBH2|FLIE_GEOLS RecName: Full=Flagellar hook-basal body complex protein FliE
gi|189422613|gb|ACD97011.1| flagellar hook-basal body complex subunit FliE [Geobacter lovleyi
SZ]
Length = 99
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 13 ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-- 70
I+ +GM F E +S S + K +G + S A+Q
Sbjct: 3 INGISGVGMSTAF----PLEKNTSSTSVADGAGKFFKELVGKVNDLSQQSDQAIQKLATG 58
Query: 71 ---SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ E + + +A + +R+K L A EV +M +
Sbjct: 59 ENRNLHETMIAVEKASVSFLFMSQVRNKALEAYQEVMRMPV 99
>gi|218133659|ref|ZP_03462463.1| hypothetical protein BACPEC_01528 [Bacteroides pectinophilus ATCC
43243]
gi|217991034|gb|EEC57040.1| hypothetical protein BACPEC_01528 [Bacteroides pectinophilus ATCC
43243]
Length = 109
Score = 35.1 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 22 RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK----TSMREAVD 77
S+ + + +F ++ + + ++ S A + TS E
Sbjct: 19 TNAVKSASSNQAATDKDTFDSVYNSVVGLLNDTNKYIQDASQAEIDFSLGNLTSTHELSV 78
Query: 78 HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ +A L ++A+RDK L A E+ M +
Sbjct: 79 YQQKANLALQYTVAIRDKALEAYKEIMNMSM 109
>gi|290475702|ref|YP_003468591.1| flagellar basal-body protein [Xenorhabdus bovienii SS-2004]
gi|289175024|emb|CBJ81827.1| flagellar biosynthesis; basal-body component [Xenorhabdus bovienii
SS-2004]
Length = 103
Score = 35.1 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQ + ++ N G +A ++ + + + + +++ +L
Sbjct: 2 SIQAIEGVLQQMKAQALQATNIANPMPVQGGFASHLTAAVEKINQTRLSATKLSQDFTL- 60
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + + + ++ ++ +L + I +R+K++SA E+ MQ+
Sbjct: 61 GVPG-VELNDVMVNMQKSSISLQMGIQVRNKLVSAYHEIMNMQV 103
>gi|113969624|ref|YP_733417.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
MR-4]
gi|113884308|gb|ABI38360.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
MR-4]
Length = 112
Score = 35.1 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++++Q I+ + I Q +N G F LL G + N+
Sbjct: 8 LLQEMQSLKGEIAPSFGISPNNIVQQVNNTSGA----DFGQLLSQAIGNVSGLQSTSSNL 63
Query: 62 SLAALQGKT--SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G T S+ + V +A ++ +R+K++ A E+ M +
Sbjct: 64 ATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112
>gi|152997452|ref|YP_001342287.1| flagellar hook-basal body complex subunit FliE [Marinomonas sp.
MWYL1]
gi|150838376|gb|ABR72352.1| flagellar hook-basal body complex subunit FliE [Marinomonas sp.
MWYL1]
Length = 120
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
M Q+Q ++ +S+ +G + Q F+ +L++ +++ +
Sbjct: 18 MRSQVQAPSTPVSNVAKVGGESEGGQTVERA------DFAEMLKNAVDNVNALQKESTQL 71
Query: 62 SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +G + + + + ++ + +R+K++ A ++ M I
Sbjct: 72 AQSYERGDEGVDLPQVMIGLQKSSVSFEAMTQVRNKLVDAYEKIMNMPI 120
>gi|119775433|ref|YP_928173.1| flagellar hook-basal body complex protein (FliE) [Shewanella
amazonensis SB2B]
gi|119767933|gb|ABM00504.1| flagellar hook-basal body complex protein (FliE) [Shewanella
amazonensis SB2B]
Length = 111
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAER 84
Q + G +S F++LL + + + +++ G + ++ + V +A
Sbjct: 28 QPLRQVGNTSGADFASLLANAVGHVNELQQSSSSLATRLDMGDTRVTLSDTVIAREKASV 87
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
++ +R+K++ A E+ M +
Sbjct: 88 AFEATVQVRNKLVEAYKEIMSMPV 111
>gi|203284213|ref|YP_002221953.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
gi|203287752|ref|YP_002222767.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
gi|201083656|gb|ACH93247.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
gi|201084972|gb|ACH94546.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
Length = 109
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
DF+ S ++ G+ F L+ ++ + + ++ L + + V + +A
Sbjct: 27 SDFSVKSEKQAGTFRELFLNLISNVNNSQLDMYKVSQQAILH--PDSVDVHDVVISMAKA 84
Query: 83 ERTLNLSIALRDKILSAVSEV 103
L+++ A+ +K + A +V
Sbjct: 85 NMNLSITKAVVEKSIKAYQDV 105
>gi|163750551|ref|ZP_02157789.1| flagellar hook-basal body complex protein FliE [Shewanella benthica
KT99]
gi|161329706|gb|EDQ00695.1| flagellar hook-basal body complex protein FliE [Shewanella benthica
KT99]
Length = 114
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+Q S G+ F ++ +S F LL A +++
Sbjct: 9 LQEMQSLSGEIKPSGLNSGFGSPITQQVSNTSGSDFGQLLSQAIGSVGELQANAGSLATR 68
Query: 65 ALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G + ++ + V +A ++ +R+K++ A E+ M +
Sbjct: 69 LDMGDTRVTLSDTVIAREKASVAFEATMQVRNKLIEAYKEIMSMPV 114
>gi|253996298|ref|YP_003048362.1| flagellar hook-basal body protein FliE [Methylotenera mobilis JLW8]
gi|253982977|gb|ACT47835.1| flagellar hook-basal body complex subunit FliE [Methylotenera
mobilis JLW8]
Length = 118
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
+ + + F+ L+ + AE + G S+ + +
Sbjct: 27 AESIANLASPIGANKSTGKVDFADALKASLDQVNQVQKSAETLGKNFALGDDSVSLSDVM 86
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+A + +I +R+K++SA ++ MQI
Sbjct: 87 IAGQKANISFQATIQVRNKLVSAYQDIMSMQI 118
>gi|88813199|ref|ZP_01128439.1| flagellar biosynthesis; basal-body component [Nitrococcus mobilis
Nb-231]
gi|88789521|gb|EAR20648.1| flagellar biosynthesis; basal-body component [Nitrococcus mobilis
Nb-231]
Length = 106
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 1/102 (0%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
+ T+ + S S P F+ LLQ + + + A L
Sbjct: 5 RIQQALQQMQTLAAQAAGRLPSEAAVDSRPADFAGLLQSAIETVNDLQQNTGRKTDAFLN 64
Query: 68 GK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ + E + ++ +R+ +L+A E+S+MQI
Sbjct: 65 GEGVPLTEVMIAGQKSRVAFEAIKEVRNHLLTAYQEISRMQI 106
>gi|254785457|ref|YP_003072886.1| flagellar hook-basal body complex protein FliE [Teredinibacter
turnerae T7901]
gi|259646004|sp|C5BSE0|FLIE_TERTT RecName: Full=Flagellar hook-basal body complex protein FliE
gi|237684569|gb|ACR11833.1| flagellar hook-basal body complex protein FliE [Teredinibacter
turnerae T7901]
Length = 120
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKIL 97
F LL+ + + +++ + ++G + + + +A + + +R+K++
Sbjct: 50 FGELLEQAVNKVNEVQQASSSMAESYVRGDSSVDVTDVMIASQKAGVAFDAMVQVRNKLV 109
Query: 98 SAVSEVSKMQI 108
A +V M I
Sbjct: 110 EAYRDVMNMPI 120
>gi|146307848|ref|YP_001188313.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina ymp]
gi|145576049|gb|ABP85581.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
mendocina ymp]
Length = 109
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+ + E SFS +L + + ++ A G+ + + + +A
Sbjct: 26 KPAASEPVQGMPSFSEMLGQAVNKVNETQQASSKLATAFEMGQSGVDLTDVMIASQKASV 85
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++ A ++ +M +
Sbjct: 86 SFQAMTQVRNKLVQAYQDIMQMPV 109
>gi|296127543|ref|YP_003634795.1| flagellar hook-basal body complex subunit FliE [Brachyspira
murdochii DSM 12563]
gi|296019359|gb|ADG72596.1| flagellar hook-basal body complex subunit FliE [Brachyspira
murdochii DSM 12563]
Length = 109
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVS 104
+ + + ++ I +AE +L+ + A+ D+ + A EV+
Sbjct: 71 QVDVSDVMNAIAEAELSLSFTKAVVDRAVRAYQEVT 106
>gi|254496580|ref|ZP_05109448.1| flagellar hook-basal body complex protein [Legionella drancourtii
LLAP12]
gi|254354204|gb|EET12871.1| flagellar hook-basal body complex protein [Legionella drancourtii
LLAP12]
Length = 104
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIAL 92
++ FSA+ Q EKA+++ G K S+ E + ++ L +I +
Sbjct: 29 ANQSPFSAVFQKAMNQVSNLNEKADSLKTRYELGDSKVSIGEVMIATQKSNIGLEAAIRV 88
Query: 93 RDKILSAVSEVSKMQI 108
R+K L A ++ M +
Sbjct: 89 RNKFLQAYQDIMGMPV 104
>gi|91200220|emb|CAJ73264.1| similar to lateral flagellar FliE-like hook basal body protein
[Candidatus Kuenenia stuttgartiensis]
Length = 113
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 37 PISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT-SMREAVDHIMQAERTLNLSIALRD 94
SF I +++ N S+ L GK ++ E + + +AE + + R+
Sbjct: 41 GTSFQDAFGSFFNE-INELQTKTNDSIEHLSSGKVENIHEVMVAMSKAEVSFKYMMEARN 99
Query: 95 KILSAVSEVSKMQ 107
K++ +EV K Q
Sbjct: 100 KLVKTYTEVMKEQ 112
>gi|294140202|ref|YP_003556180.1| flagellar hook-basal body complex protein FliE [Shewanella violacea
DSS12]
gi|293326671|dbj|BAJ01402.1| flagellar hook-basal body complex protein FliE [Shewanella violacea
DSS12]
Length = 114
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 6 IQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+Q S G F+ ++ +S F LL A G +G+++ +
Sbjct: 9 LQEMQSLSGEIKPSGFNSGFSSPITQQVSNTSGSDFGQLLSQ-AIGTVGELQANSGSLAS 67
Query: 65 ALQ---GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + V +A ++ +R+K++ A E+ M +
Sbjct: 68 RLDMGDTRVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 114
>gi|120598249|ref|YP_962823.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
W3-18-1]
gi|146293673|ref|YP_001184097.1| flagellar hook-basal body complex subunit FliE [Shewanella
putrefaciens CN-32]
gi|120558342|gb|ABM24269.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
W3-18-1]
gi|145565363|gb|ABP76298.1| flagellar hook-basal body complex subunit FliE [Shewanella
putrefaciens CN-32]
Length = 111
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 16 TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMR 73
T + G+ + Q N G+ F LL G + N++ G T S+
Sbjct: 20 TPSFGISPNIMQQVNNTSGA---DFGQLLSQAVGNVSGLQSTSSNLATRLEMGDTTVSLS 76
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ V +A ++ +R+K++ A E+ M +
Sbjct: 77 DTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111
>gi|167835059|ref|ZP_02461942.1| flagellar hook-basal body complex protein [Burkholderia
thailandensis MSMB43]
Length = 114
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVSLAALQGKTSMREAVDHIMQAE 83
G ++ SF++ ++ GD +KA E + S+ + + + +A
Sbjct: 30 ATTLAGSGAATAGSFASAMKASLDKISGDQQKALGEAHAFEIGAQNVSLNDVMVDMQKAN 89
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++SA +E+ +M +
Sbjct: 90 IGFQFGLQVRNKLVSAYNEIMQMSV 114
>gi|42766710|gb|AAS45438.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
Length = 144
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 24/51 (47%)
Query: 58 AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
E + S+ + + + +A + +R+K++SA +E+ +M +
Sbjct: 94 GEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 144
>gi|167561150|ref|ZP_02354066.1| flagellar hook-basal body complex protein [Burkholderia
oklahomensis EO147]
Length = 100
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVSLAALQGKTSMREAVDHIMQAE 83
T G ++ SF++ ++ GD +KA E + S+ + + + +A
Sbjct: 16 TAALAGSGAATAGSFASAMKASLDKISGDQQKALGEARAFELGAQNVSLNDVMVDMQKAN 75
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++SA +E+ +M +
Sbjct: 76 IGFQFGLQVRNKLVSAYNEIMQMSV 100
>gi|258404783|ref|YP_003197525.1| flagellar hook-basal body complex subunit FliE [Desulfohalobium
retbaense DSM 5692]
gi|257797010|gb|ACV67947.1| flagellar hook-basal body complex subunit FliE [Desulfohalobium
retbaense DSM 5692]
Length = 103
Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 14 SHTDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAENVSLAALQGK-TS 71
S + + +N G +P+ SF L + + + A L + G TS
Sbjct: 7 SLAAGAANFLEQSGAANAGGQQTPVESFRDTLLEAVQEVDSQKKTANTAILDSTTGGGTS 66
Query: 72 MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ E + + +A ++ L + +R+K + A E+ +MQ+
Sbjct: 67 IHETMVAMEKAGTSMKLMVQVRNKAMDAYKEIMRMQV 103
>gi|167568367|ref|ZP_02361241.1| flagellar hook-basal body complex protein [Burkholderia
oklahomensis C6786]
Length = 100
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVSLAALQGKTSMREAVDHIMQAE 83
T G ++ SF++ ++ GD +KA E + S+ + + + +A
Sbjct: 16 TAALAGSGAATAGSFASAMKASLDKISGDQQKALGEARAFELGAQNVSLNDVMVDMQKAN 75
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+K++SA +E+ +M +
Sbjct: 76 IGFQFGLQVRNKLVSAYNEIMQMSV 100
>gi|239628993|ref|ZP_04672024.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519139|gb|EEQ59005.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 101
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 23 YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
D ++S +G + P+ F +L+ K A M + + + + G+ ++QA
Sbjct: 15 SDSQKSSPAKGQAGPVPFKEMLRTAVKEADQAMRETQEMDIKLASGQVD--NLHTALIQA 72
Query: 83 ERT---LNLSIALRDKILSAVSEVSKMQI 108
E++ + + L K ++A +++ MQ+
Sbjct: 73 EKSAAVVEFTTQLASKAVNAYNQIMGMQV 101
>gi|260767707|ref|ZP_05876642.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
CIP 102972]
gi|260617216|gb|EEX42400.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
CIP 102972]
gi|315179461|gb|ADT86375.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
NCTC 11218]
Length = 94
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 20 GMRYDFTQNSNEEGGS-SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
M + + G F +L G + + ++ + +G S+ + +
Sbjct: 3 AMMVEAANSRPAATGQKVGADFGDMLTQAINNVNGLQKTSSDLQMRFDRGDEGVSLSDVM 62
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +I +R+K++ A E+ M +
Sbjct: 63 IARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94
>gi|88800452|ref|ZP_01116016.1| flagellar hook-basal body complex protein (FliE) [Reinekea sp.
MED297]
gi|88776782|gb|EAR07993.1| flagellar hook-basal body complex protein (FliE) [Reinekea sp.
MED297]
Length = 143
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+EQ++ S + Q + G SF + + + A+ ++
Sbjct: 38 VEQMRKQIQSASESQAAPDAISGDQAATPVGDVP--SFGDMFKSAVDTVNDNQAAAKEIA 95
Query: 63 LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G K + E + + ++ + +R+K++ A E+ M +
Sbjct: 96 TRYEMGDPKVDLPEVMIALQKSSVSFQAMTQVRNKMIEAYKEIINMPL 143
>gi|126175129|ref|YP_001051278.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS155]
gi|125998334|gb|ABN62409.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS155]
Length = 111
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQAERTLNLSIA 91
+S F LL G + N++ G T S+ + V +A ++
Sbjct: 35 NTSGADFGQLLSQAVGNVSGLQSTSSNLATRLEMGDTTVSLSDTVIAREKASVAFEATVQ 94
Query: 92 LRDKILSAVSEVSKMQI 108
+R+K++ A E+ M +
Sbjct: 95 VRNKLVEAYKEIMSMPV 111
>gi|295678024|ref|YP_003606548.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1002]
gi|295437867|gb|ADG17037.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1002]
Length = 111
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 29 SNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVSLAALQGKTSMREAVDHIMQAERTL 86
+ + G ++P +F+A L+ D +KA E+ + S+ + + + +A
Sbjct: 30 AEQSGAATPTNFAAALKASLDKISSDQQKAIGESQAFELGASNVSLNDVMVDMQKANIGF 89
Query: 87 NLSIALRDKILSAVSEVSKMQI 108
+ +R+K+++A +++++M I
Sbjct: 90 QFGLQVRNKLVAAYNDIAQMSI 111
>gi|229102344|ref|ZP_04233052.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-28]
gi|229115186|ref|ZP_04244596.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-3]
gi|228668326|gb|EEL23758.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-3]
gi|228680991|gb|EEL35160.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-28]
Length = 99
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
HT G E +P F LL+DM + + A L +G
Sbjct: 8 HTQPFGAIQSIGAPKTSETSVAPGKKFIDLLEDM-NQTQNNAQTAVYDLLT--KGVGETH 64
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +AE + + +RD ++ + MQI
Sbjct: 65 DVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99
>gi|228964728|ref|ZP_04125835.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
sotto str. T04001]
gi|229096231|ref|ZP_04227204.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-29]
gi|228687191|gb|EEL41096.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-29]
gi|228794978|gb|EEM42477.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 94
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
HT G E +P F LL+DM + + A L +G
Sbjct: 3 HTQPFGAIQSIGAPKTSETSVAPGKKFIDLLEDM-NQTQNNAQTAVYDLLT--KGVGETH 59
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +AE + + +RD ++ + MQI
Sbjct: 60 DVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94
>gi|24374741|ref|NP_718784.1| flagellar hook-basal body complex protein FliE [Shewanella
oneidensis MR-1]
gi|24349403|gb|AAN56228.1|AE015760_7 flagellar hook-basal body complex protein FliE [Shewanella
oneidensis MR-1]
Length = 112
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
+++++Q ++ + I Q +N G F LL G + N+
Sbjct: 8 LLQEMQSLKGEVTPSFGISPNNIVQQVNNTSGA----DFGQLLSQAIGNVSGLQSTSSNL 63
Query: 62 SLAALQGKT--SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G T S+ ++V +A +I +R+K++ A E+ M +
Sbjct: 64 ATRLDMGDTTVSLSDSVIAREKASVAFEATIQVRNKLVEAYKEIMSMPV 112
>gi|225375316|ref|ZP_03752537.1| hypothetical protein ROSEINA2194_00941 [Roseburia inulinivorans DSM
16841]
gi|225212805|gb|EEG95159.1| hypothetical protein ROSEINA2194_00941 [Roseburia inulinivorans DSM
16841]
Length = 103
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 39 SFSALLQ---DMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
SFS++L +M A++ + G++ + + +A + ++A+RD
Sbjct: 30 SFSSVLSSAMNMVSETNNLQNNAQSEVIRFALGQSENTHDLSTAQTKALTAIQYTVAVRD 89
Query: 95 KILSAVSEVSKMQI 108
K++ A E+ MQI
Sbjct: 90 KMIDAYKEIMNMQI 103
>gi|238927419|ref|ZP_04659179.1| flagellar hook-basal body complex subunit FliE [Selenomonas
flueggei ATCC 43531]
gi|238884701|gb|EEQ48339.1| flagellar hook-basal body complex subunit FliE [Selenomonas
flueggei ATCC 43531]
Length = 102
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIG-DMEKAE 59
M ++ +Q T + T +G D + SF L+D + E
Sbjct: 3 MEVQALQMTPVAMRATSHLGETIDKAEKK---------SFGMYLKDALSEVNHLQLASEE 53
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L A + + + +A+ L L++ +R++ LSA E+ +MQ+
Sbjct: 54 QTKLLAAGEVQDVSQVIVAGQKADIALQLTLQMRNRALSAYQEIMRMQV 102
>gi|23099009|ref|NP_692475.1| flagellar hook-basal body protein FliE [Oceanobacillus iheyensis
HTE831]
gi|38503021|sp|Q8EQY4|FLIE_OCEIH RecName: Full=Flagellar hook-basal body complex protein FliE
gi|22777237|dbj|BAC13510.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
Length = 102
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 8 GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA----IGDMEKAENVSL 63
+ ++ I Q + F++ L++ + + +K E +
Sbjct: 2 TISIMGNNVTPIQPNESVNQVKRSPSEAQAN-FASTLKNAIEDLNHIQLESDKKTEAFAS 60
Query: 64 AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + ++ TL ++ ++ K++ A +E+ +MQ+
Sbjct: 61 GKID---DLHDVMITAQKSSVTLETTVQVQKKVIDAYNEIMRMQV 102
>gi|258621103|ref|ZP_05716137.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
VM573]
gi|258626176|ref|ZP_05721024.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
VM603]
gi|262166237|ref|ZP_06033974.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
VM223]
gi|262170879|ref|ZP_06038557.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
MB-451]
gi|258581531|gb|EEW06432.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
VM603]
gi|258586491|gb|EEW11206.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
VM573]
gi|261891955|gb|EEY37941.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
MB-451]
gi|262025953|gb|EEY44621.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
VM223]
Length = 94
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 20 GMRYDFTQNSNEEGGS-SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
M ++ G F A+L + G + + ++ + +G S+ + +
Sbjct: 3 AMMFEAMNTQPASTGQKVGADFGAMLNNAINNVNGLQKTSSDLQMRFDRGDEGVSLSDVM 62
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +I +R+K++ A E+ M +
Sbjct: 63 IARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94
>gi|332187873|ref|ZP_08389606.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
S17]
gi|332012034|gb|EGI54106.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
S17]
Length = 124
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 36 SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
P SF+ L+ KG ++A +S + +G+T + + + QA ++ +R+
Sbjct: 51 PPTSFADTLESALKGVNEGQQQAARLSESYERGETVDIAKVMMARQQASVGFEATLQVRN 110
Query: 95 KILSAVSEVSKMQI 108
K+LSA ++ M +
Sbjct: 111 KLLSAYKDIMSMPV 124
>gi|317406224|gb|EFV86470.1| flagellar hook-basal body complex protein FliE [Achromobacter
xylosoxidans C54]
Length = 110
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAK--GAIGDMEKA 58
M + + G S + + + + E + P F+A LQ + + + A
Sbjct: 1 MAVSGLSGIESMLQQMRVAVTKAETGNLAAGEAVAQPDGFAAELQRSIRRVTSAQNAATA 60
Query: 59 ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + S+ + + + +A ++ +R+K+++A E+S M +
Sbjct: 61 QAKAFELGAPDVSLNDVMIDLQKASIGFQTAVQVRNKLVAAYKEISSMAV 110
>gi|294084402|ref|YP_003551160.1| flagellar hook-basal body complex subunit FliE [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663975|gb|ADE39076.1| flagellar hook-basal body complex subunit FliE [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 103
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 10 NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDME-KAENVSLAALQG 68
++ S + R D + + G FS + D K + AE +
Sbjct: 9 SNISSLHAQVLKRADTALSKEPDNG-----FSDRIGDALKSVADTQKNAAELTKAYEMGT 63
Query: 69 KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + + + + + +++ +R+K+LSA ++ M +
Sbjct: 64 ENDLTKVMVNQQVSSLGFQMTLNVRNKVLSAYKDIMNMPV 103
>gi|160876178|ref|YP_001555494.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS195]
gi|217972615|ref|YP_002357366.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS223]
gi|304409961|ref|ZP_07391580.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS183]
gi|307302326|ref|ZP_07582084.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
BA175]
gi|160861700|gb|ABX50234.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS195]
gi|217497750|gb|ACK45943.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS223]
gi|304351370|gb|EFM15769.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS183]
gi|306914364|gb|EFN44785.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
BA175]
gi|315268374|gb|ADT95227.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS678]
Length = 111
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM--REAVDHIMQAERTLNLSIA 91
+S F LL G + N++ G T++ + V +A ++
Sbjct: 35 NTSGADFGQLLSQAVGNVSGLQSTSSNLATRLEMGDTTVTLSDTVIAREKASVAFEATVQ 94
Query: 92 LRDKILSAVSEVSKMQI 108
+R+K++ A E+ M +
Sbjct: 95 VRNKLVEAYKEIMSMPV 111
>gi|311695218|gb|ADP98091.1| flagellar hook-basal body complex protein FliE [marine bacterium
HP15]
Length = 122
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 39 SFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKI 96
SF+ +L + + A ++ A G + + ++ + +R+++
Sbjct: 51 SFNDMLSNAVNNVNDLQKTAGDLRTAYDMGDPNVDITRVMIAAQKSSVSFEALTQVRNRV 110
Query: 97 LSAVSEVSKMQI 108
+ A ++ M I
Sbjct: 111 VRAYEDIMNMPI 122
>gi|254234236|ref|ZP_04927559.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa C3719]
gi|896312|gb|AAB06800.1| flagellar basal body component [Pseudomonas aeruginosa]
gi|126166167|gb|EAZ51678.1| flagellar hook-basal body complex protein FliE [Pseudomonas
aeruginosa C3719]
Length = 109
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 35 SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIAL 92
+ SFS +L + + ++ A G+ + + + +A + +
Sbjct: 34 AGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQV 93
Query: 93 RDKILSAVSEVSKMQI 108
R+K++ A ++ +M +
Sbjct: 94 RNKLVQAYQDIMQMPV 109
>gi|94314178|ref|YP_587387.1| flagellar hook-basal body complex protein FliE [Cupriavidus
metallidurans CH34]
gi|93358030|gb|ABF12118.1| flagellar hook-basal body complex protein (FliE) [Cupriavidus
metallidurans CH34]
Length = 106
Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAK--GAIGDMEKAENVS 62
I + + +E ++ SF+ LQ + A D + +
Sbjct: 2 TISSIEGMLQQMRATAQVAG-GGAAPQEASAATESFAGELQRSLQRLNATQDRAYGKAEA 60
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ S+ + + + +A + ++ +R+++ +A E+ M +
Sbjct: 61 FEMGKAGVSLNDVMIDMQKANISFQTAVQVRNRLTAAYQEMMNMPV 106
>gi|317052366|ref|YP_004113482.1| flagellar hook-basal body complex subunit FliE [Desulfurispirillum
indicum S5]
gi|316947450|gb|ADU66926.1| flagellar hook-basal body complex subunit FliE [Desulfurispirillum
indicum S5]
Length = 106
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
+ ++ + FS L+ K + A+ + G++ + + + QA+ +
Sbjct: 24 EATSAQPSGEQTQFSEFLKSSLKEVNTAQKDADRAIEELIAGESKDIHTTMIKMQQADVS 83
Query: 86 LNLSIALRDKILSAVSEVSKMQI 108
L + + +R+KI+ A EV + Q+
Sbjct: 84 LKMMMQVRNKIMDAYQEVMRTQV 106
>gi|121997301|ref|YP_001002088.1| flagellar hook-basal body complex subunit FliE [Halorhodospira
halophila SL1]
gi|121588706|gb|ABM61286.1| flagellar hook-basal body complex subunit FliE [Halorhodospira
halophila SL1]
Length = 103
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 40 FSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILS 98
FS LL+ + + A+ ++ A + G+ + + + + +A+ + +R+++L
Sbjct: 34 FSDLLRQAVEQVNDNQVDAKGMTDAFMNGEDVQLTDVMMSVQKADVSFEAMKEVRNQLLE 93
Query: 99 AVSEVSKMQI 108
A E++ MQ+
Sbjct: 94 AYQEIANMQV 103
>gi|33592503|ref|NP_880147.1| flagellar hook-basal body complex protein FliE [Bordetella
pertussis Tohama I]
gi|33572149|emb|CAE41693.1| flagellar hook-basal body complex protein FliE [Bordetella
pertussis Tohama I]
gi|332381921|gb|AEE66768.1| flagellar hook-basal body complex protein FliE [Bordetella
pertussis CS]
Length = 110
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + + G S +S + + E P F+A LQ + A +
Sbjct: 1 MAVSGLSGIESMLSQMRAVVRAAQSGGATEAELAPGPSGFAAELQRSIRSVSQAQNAASD 60
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A G S+ + + + +A S+ +R+++++A E+S M +
Sbjct: 61 QAKAFELGAPGISLNDVMIDLQKASLGFQTSVQVRNRLVAAYKEISSMAV 110
>gi|289208336|ref|YP_003460402.1| flagellar hook-basal body complex subunit FliE [Thioalkalivibrio
sp. K90mix]
gi|288943967|gb|ADC71666.1| flagellar hook-basal body complex subunit FliE [Thioalkalivibrio
sp. K90mix]
Length = 109
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 26 TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
T + + G F +L+D +G + A ++ G S+ + + + ++
Sbjct: 25 TNPAQQPGKVGGAEFQNVLRDSLRGVNDVQQSATDLQTRFELGDENVSLPQVMVAMNKSS 84
Query: 84 RTLNLSIALRDKILSAVSEVSKMQI 108
+ +R+++L+A E+ +MQ+
Sbjct: 85 IAFEATNQVRNRLLNAYQEIMRMQV 109
>gi|127512296|ref|YP_001093493.1| flagellar hook-basal body complex subunit FliE [Shewanella loihica
PV-4]
gi|126637591|gb|ABO23234.1| flagellar hook-basal body complex subunit FliE [Shewanella loihica
PV-4]
Length = 110
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKG--AIGDMEKA 58
M I + T I + + +S F +LL + A+ +
Sbjct: 1 MQIGANSLLQEMQTLTGEIKPNGITPNITQQVANTSGSDFGSLLSEAVGNVNALQATSSS 60
Query: 59 ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + V +A ++ +R+K++ A E+ M +
Sbjct: 61 LQTRLDMGDTRVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 110
>gi|323698501|ref|ZP_08110413.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio sp.
ND132]
gi|323458433|gb|EGB14298.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
desulfuricans ND132]
Length = 109
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAEN 60
M+ + N++ + D D T + + P+ SFS L+ E E
Sbjct: 1 MVVKSVALNAYQNAMDIRRRTVDSTVSQSLRKPQEPVRSFSDTLKSSLVKVNDLQETKET 60
Query: 61 VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ GKT ++ E + + +A + ++ A+R KI++A E+ +M
Sbjct: 61 MIEEFASGKTQNVHELMISMQKAGMAMQMTGAVRSKIMNAYKEIMQMS 108
>gi|218133177|ref|ZP_03461981.1| hypothetical protein BACPEC_01039 [Bacteroides pectinophilus ATCC
43243]
gi|217992050|gb|EEC58054.1| hypothetical protein BACPEC_01039 [Bacteroides pectinophilus ATCC
43243]
Length = 616
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 19 IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
+ D++ + G+S + ++ + A A+ + G+ + E+V+
Sbjct: 355 VNESVDYSAIARATAGASGAELANIVNEAALRAVRHGRR--------TVGQEDLEESVEA 406
Query: 79 IMQAERTLNLSIALRDKILSAVSEV 103
++ ++ N S+ ++K++ + EV
Sbjct: 407 VIAGQKKKNSSVTNKEKLIVSYHEV 431
>gi|212634366|ref|YP_002310891.1| flagellar hook-basal body complex protein FliE [Shewanella
piezotolerans WP3]
gi|212555850|gb|ACJ28304.1| Flagellar hook-basal body complex protein FliE [Shewanella
piezotolerans WP3]
Length = 110
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M I S IG + T + + +S F LL A N
Sbjct: 1 MQIGANSLLQEMQSLNGQIGTQGAQTSVARQVNNTSGADFGQLLSQAVGNVSELQSNASN 60
Query: 61 VSLAALQGKTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ G T++ + V ++ ++ +R+K++ A ++ M +
Sbjct: 61 LATRLDMGDTTVTLSDTVIAREKSSVAFEATVQVRNKLVEAYKDIMSMPV 110
>gi|153001453|ref|YP_001367134.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS185]
gi|151366071|gb|ABS09071.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
OS185]
Length = 111
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM--REAVDHIMQAERTLNLSIA 91
+S F LL G + N++ G T++ + V +A ++
Sbjct: 35 NTSSADFGQLLSQAVGNVSGLQSTSSNLATRLEMGDTTVTLSDTVIAREKASVAFEATVQ 94
Query: 92 LRDKILSAVSEVSKMQI 108
+R+K++ A E+ M +
Sbjct: 95 VRNKLVEAYKEIMSMPV 111
>gi|33596158|ref|NP_883801.1| flagellar hook-basal body complex protein FliE [Bordetella
parapertussis 12822]
gi|33601566|ref|NP_889126.1| flagellar hook-basal body complex protein FliE [Bordetella
bronchiseptica RB50]
gi|33573161|emb|CAE36813.1| flagellar hook-basal body complex protein FliE [Bordetella
parapertussis]
gi|33576002|emb|CAE33082.1| flagellar hook-basal body complex protein FliE [Bordetella
bronchiseptica RB50]
Length = 110
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 1 MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
M + + G S +S + + E P F+A LQ + A +
Sbjct: 1 MAVSGLSGIESMLSQMRAVVRAAQSGGATEAELAPGPSGFAAELQRSIRRVSQAQNAASD 60
Query: 61 VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ A G S+ + + + +A S+ +R+++++A E+S M +
Sbjct: 61 QAKAFELGAPGISLNDVMIDLQKASLGFQTSVQVRNRLVAAYKEISSMAV 110
>gi|206970823|ref|ZP_03231775.1| putative flagellar hook-basal body complex protein FliE [Bacillus
cereus AH1134]
gi|218231410|ref|YP_002366430.1| flagellar hook-basal body protein FliE [Bacillus cereus B4264]
gi|228920456|ref|ZP_04083801.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229109202|ref|ZP_04238801.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-15]
gi|229144357|ref|ZP_04272763.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST24]
gi|229149947|ref|ZP_04278175.1| Flagellar hook-basal body complex [Bacillus cereus m1550]
gi|206734459|gb|EDZ51629.1| putative flagellar hook-basal body complex protein FliE [Bacillus
cereus AH1134]
gi|218159367|gb|ACK59359.1| putative flagellar hook-basal body complex protein FliE [Bacillus
cereus B4264]
gi|228633628|gb|EEK90229.1| Flagellar hook-basal body complex [Bacillus cereus m1550]
gi|228639144|gb|EEK95568.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST24]
gi|228674212|gb|EEL29457.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-15]
gi|228839086|gb|EEM84382.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 99
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Query: 15 HTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
HT G + +P F LL+DM + + A L +G
Sbjct: 8 HTQPFGAIQSIGAPKTSQTSVAPEKKFIDLLEDM-NQTQNNAQTAVYDLLT--KGVGETH 64
Query: 74 EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ + +AE + + +RD ++ + MQI
Sbjct: 65 DVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99
>gi|311279121|ref|YP_003941352.1| flagellar hook-basal body complex subunit FliE [Enterobacter
cloacae SCF1]
gi|308748316|gb|ADO48068.1| flagellar hook-basal body complex subunit FliE [Enterobacter
cloacae SCF1]
Length = 103
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG ++ Q + G S +A L ++ +AE ++
Sbjct: 2 AIQGIEGVLTQMQAAANVARNQQVDEQPGISFAGQLNAALDRISDTQNSARAQAEKFAIG 61
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ ++ + + + ++ +L L I +R+K+++A E+ MQ+
Sbjct: 62 --EPGVALNDVMTDLQKSSVSLQLGIQVRNKLVTAYQEMMGMQV 103
>gi|299066534|emb|CBJ37724.1| Flagellar hook-basal body complex protein fliE [Ralstonia
solanacearum CMR15]
Length = 104
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 2 MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
M E IQ ++ D + + + F L+ +G + ++
Sbjct: 1 MTEAIQA----LAQAGNSEAVADLQASPAAAAPVAGMGFGDLVSQGLEGVNQQLLVSQKD 56
Query: 62 SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G S+ + + + ++ + L + +R+++L A +V KMQ+
Sbjct: 57 LQQLATGNAESLHQVMIRLEESRLSFQLLLQVRNRLLEAYQDVMKMQV 104
>gi|255021372|ref|ZP_05293420.1| Flagellar hook-basal body complex protein fliE [Acidithiobacillus
caldus ATCC 51756]
gi|254969235|gb|EET26749.1| Flagellar hook-basal body complex protein fliE [Acidithiobacillus
caldus ATCC 51756]
Length = 107
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+ ++ ++ +S + + + F+ L+ M +G + +A +
Sbjct: 1 MSSVESLDALLSQLRNLAGQAQ-GLKVPAASSAGATGFAETLKGMVEGVNQEQAQANQLQ 59
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
+ G S+ + + +A+ + + +R+K++SA ++ +Q
Sbjct: 60 NSFASGDPAVSLSQVMVASQKADLSFQTMLQVRNKLVSAYQDIMNIQ 106
>gi|320352670|ref|YP_004194009.1| type 11 methyltransferase [Desulfobulbus propionicus DSM 2032]
gi|320121172|gb|ADW16718.1| Methyltransferase type 11 [Desulfobulbus propionicus DSM 2032]
Length = 586
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
+Q + +T + E + + + A +++AE + +
Sbjct: 356 AVQNAEQRVQRAETAAQSAEQRAQRAETAVQNAEQRVQQAEIAVQNAEQRVQRAETAAQS 415
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSA 99
A + +++A + AE+ + +IA+ +L++
Sbjct: 416 A---EQRVQQAETAVQNAEQRVQQAIAIHQAVLNS 447
>gi|116696303|ref|YP_841879.1| flagellar hook-basal body complex protein [Ralstonia eutropha H16]
gi|113530802|emb|CAJ97149.1| flagellar hook-basal body complex protein [Ralstonia eutropha H16]
Length = 115
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
I I+G + + +Q++ GG L + +AE
Sbjct: 12 ISSIEGMLQQLRGMSQVASGNSASQSAAPVGGGFAGELQRSLGRINAAQERAYGQAEAFE 71
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
L + ++ + + + +A + + +R+++++A E+ M +
Sbjct: 72 LG--KPGVALNDVMIDLQKANVSFQTGVQVRNRLVAAYQEMMNMAV 115
>gi|242279374|ref|YP_002991503.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Desulfovibrio salexigens DSM 2638]
gi|242122268|gb|ACS79964.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Desulfovibrio salexigens DSM 2638]
Length = 809
Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 4 EQIQGTNSFI----SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
EQ Q I D + G + F+ + ++ K A M+
Sbjct: 630 EQSQSIGGIIGVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQSTR 689
Query: 60 NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
V A + S + +++ Q + + L +K + A E+S M +
Sbjct: 690 EVEEAIKAIQESAQSNIENTDQTVEAVEHASNLVEKSVQAFQEISGMSV 738
>gi|226225738|ref|YP_002759844.1| flagellar hook-basal body complex protein FliE [Gemmatimonas
aurantiaca T-27]
gi|226088929|dbj|BAH37374.1| flagellar hook-basal body complex protein FliE [Gemmatimonas
aurantiaca T-27]
Length = 106
Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 34 GSSPISFSALLQDMAKGAIGDM-EKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIAL 92
G+ SF L + A + E + +A L++ I L
Sbjct: 31 GTGENSFGNTLTRAINEVSDARDRSGDLTKRFAAGENVELHEVMAASEEAGIALDMLIEL 90
Query: 93 RDKILSAVSEVSKMQ 107
R+K++ A V MQ
Sbjct: 91 RNKVVEAYRSVISMQ 105
>gi|300722639|ref|YP_003711929.1| flagellar basal-body protein [Xenorhabdus nematophila ATCC 19061]
gi|297629146|emb|CBJ89742.1| flagellar biosynthesis; basal-body component [Xenorhabdus
nematophila ATCC 19061]
Length = 103
Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQ + ++ +A ++ + + + ++A+N +L
Sbjct: 2 SIQAIEGVLQQMQVQALQAANIAKPVPVQSGFASQLTAAVEKINQTRLNSDKQAKNFTL- 60
Query: 65 ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
+ G + + + ++ ++ +L + I +R+K++SA E+ MQ+
Sbjct: 61 GVPG-VELNDVMVNMQKSSISLQMGIQVRNKLVSAYHEIMNMQV 103
>gi|261209870|ref|ZP_05924171.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC341]
gi|260841056|gb|EEX67581.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC341]
Length = 94
Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 20 GMRYDFTQNSNEEGGS-SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
M ++ G FSA+L + G + + ++ + +G S+ + +
Sbjct: 3 AMMFEAMNTQPASTGQKVGADFSAMLNNAINNVNGLQKTSSDLQMRFDRGDEGVSLSDVM 62
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +I +R+K++ A E+ M +
Sbjct: 63 IARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94
>gi|323527691|ref|YP_004229844.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1001]
gi|323384693|gb|ADX56784.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
CCGE1001]
Length = 116
Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA--ENVS 62
+Q +S + + E G ++ F++ L+ GD KA E+ +
Sbjct: 11 ALQQLHSMAAAAAGGSTAATGASAAGESGAATAGGFASALKASLDKISGDQNKAVGESKA 70
Query: 63 LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ + + + +A + +R+K+++A +++ +MQ+
Sbjct: 71 FELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVTAYNDIMQMQV 116
>gi|300114784|ref|YP_003761359.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
watsonii C-113]
gi|299540721|gb|ADJ29038.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
watsonii C-113]
Length = 106
Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 3 IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
+E I T + D ++ E F+AL + +++ +
Sbjct: 1 MESINSTQLLEQMRAATALAKDDLASATGELPEG--EFAALFRQAIDTVNQFQQQSSGLQ 58
Query: 63 LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
A ++G + E + ++ + ++ +R++++SA E+ MQI
Sbjct: 59 TAFVRGDSNVDLAEVMIASQKSTVSFQAALQVRNRLVSAYQEIMNMQI 106
>gi|261340402|ref|ZP_05968260.1| flagellar hook-basal body complex protein FliE [Enterobacter
cancerogenus ATCC 35316]
gi|288317494|gb|EFC56432.1| flagellar hook-basal body complex protein FliE [Enterobacter
cancerogenus ATCC 35316]
Length = 104
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 5 QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
IQG +S + + ++ G ISF+ L A +
Sbjct: 2 AIQGIEGVLSQLQATAVSARSQNVAEQQPG---ISFAGQLHAALDRISETQTAARTQAEK 58
Query: 65 ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
G+ ++ + + + +A +L + I +R+K++SA +V MQ+
Sbjct: 59 FSLGEPGVALNDVMTDLQKASVSLQMGIQVRNKLISAYQDVMSMQV 104
>gi|161581995|ref|NP_231765.2| flagellar hook-basal body protein FliE [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|255745128|ref|ZP_05419077.1| flagellar hook-basal body complex protein FliE [Vibrio cholera CIRS
101]
gi|262153483|ref|ZP_06028613.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
INDRE 91/1]
gi|262167494|ref|ZP_06035200.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
RC27]
gi|262191384|ref|ZP_06049574.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae CT
5369-93]
gi|255736958|gb|EET92354.1| flagellar hook-basal body complex protein FliE [Vibrio cholera CIRS
101]
gi|262024066|gb|EEY42761.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
RC27]
gi|262030720|gb|EEY49354.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
INDRE 91/1]
gi|262032759|gb|EEY51307.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae CT
5369-93]
gi|327484663|gb|AEA79070.1| Flagellar hook-basal body complex protein FliE [Vibrio cholerae
LMA3894-4]
Length = 103
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 20 GMRYDFTQNSNEEGGS-SPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
M ++ G F A+L G + + ++ +G S+ + +
Sbjct: 12 AMMFEAMNTQPASTGQKVGADFGAMLTKAINNVNGLQKTSSDMQTRFDRGDEGISLSDVM 71
Query: 77 DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
++ +I +R+K++ A E+ M +
Sbjct: 72 IARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
>gi|77165823|ref|YP_344348.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
oceani ATCC 19707]
gi|254434823|ref|ZP_05048331.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
oceani AFC27]
gi|76884137|gb|ABA58818.1| Flagellar hook-basal body complex protein FliE [Nitrosococcus
oceani ATCC 19707]
gi|207091156|gb|EDZ68427.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
oceani AFC27]
Length = 106
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 27 QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAER 84
+++ G F+ L + +++ + A ++G + E + ++
Sbjct: 23 NSASTAGELPEGEFATLFRQAIDSVNQFQQQSSELQTAFVRGDSNVDLAEVMIASQKSTV 82
Query: 85 TLNLSIALRDKILSAVSEVSKMQI 108
+ ++ +R++++SA E+ MQI
Sbjct: 83 SFQAALQVRNRLVSAYQEIMNMQI 106
>gi|307822871|ref|ZP_07653102.1| flagellar hook-basal body complex subunit FliE [Methylobacter
tundripaludum SV96]
gi|307736475|gb|EFO07321.1| flagellar hook-basal body complex subunit FliE [Methylobacter
tundripaludum SV96]
Length = 104
Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
N ++ + + + GG+ F+A+L+ + A ++ A G
Sbjct: 6 VNQVLAQMRAMSLEAGGGKVQETGGGA---DFAAMLKQTIGTVNDTQQTAGKMTEAFESG 62
Query: 69 KTSMR--EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
T++ E + +A + + +R+K++ A +V M +
Sbjct: 63 DTNVSLAEVMVASQKASVSFQAMLQVRNKLVEAYQDVMNMPM 104
>gi|312884913|ref|ZP_07744603.1| flagellar hook-basal body protein FliE [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367390|gb|EFP94952.1| flagellar hook-basal body protein FliE [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 103
Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 9 TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
+ F S + T+ + G + F+ LL+ + + ++ + +G
Sbjct: 3 IDGFQSEMQAMMFEASSTRPTAT-GETVGADFNKLLKKAINNVNSLSQTSSDLQMRFDRG 61
Query: 69 K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
S+ + + ++ +I +R+K++ A E+ M +
Sbjct: 62 DKDVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.307 0.133 0.315
Lambda K H
0.267 0.0400 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,382,036,878
Number of Sequences: 14124377
Number of extensions: 40136300
Number of successful extensions: 121581
Number of sequences better than 10.0: 1071
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 398
Number of HSP's that attempted gapping in prelim test: 120549
Number of HSP's gapped (non-prelim): 1333
length of query: 108
length of database: 4,842,793,630
effective HSP length: 76
effective length of query: 32
effective length of database: 3,769,340,978
effective search space: 120618911296
effective search space used: 120618911296
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.5 bits)
S2: 75 (33.5 bits)