BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780379|ref|YP_003064792.1| flagellar hook-basal body
protein FliE [Candidatus Liberibacter asiaticus str. psy62]
         (108 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|296133050|ref|YP_003640297.1| flagellar hook-basal body complex subunit FliE [Thermincola sp. JR]
 gi|296031628|gb|ADG82396.1| flagellar hook-basal body complex subunit FliE [Thermincola potens
           JR]
          Length = 99

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I    T             E  S  +SF   L+           ++E +    + G+  +
Sbjct: 3   IDQLLTAQPVVLTDSRPTNEDNSETVSFGEFLKKALNEVNNLQVQSEEMKQKLVTGQIEN 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + +    +A     L++ +R+KI+ A  E+ +MQ+
Sbjct: 63  VHDVMIAAEKANLAFELTLQVRNKIVEAYQEIMRMQV 99


>gi|168187559|ref|ZP_02622194.1| flagellar hook-basal body complex protein [Clostridium botulinum C
           str. Eklund]
 gi|169294575|gb|EDS76708.1| flagellar hook-basal body complex protein [Clostridium botulinum C
           str. Eklund]
          Length = 103

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N FI  +          Q   +      + F  +L+           ++E ++   ++G
Sbjct: 3   INDFIPSSGIYSKVDSLNQQKPKNIIDEKLGFEDILKGQLDKVNEKQLESEKITDDFIKG 62

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    +A+ ++ L++ +R+K+L A  E+++MQ+
Sbjct: 63  EDVEVHDVMIKNEEAKLSMQLAVQVRNKLLEAYQEINRMQV 103


>gi|224174161|ref|XP_002339855.1| predicted protein [Populus trichocarpa]
 gi|222832385|gb|EEE70862.1| predicted protein [Populus trichocarpa]
          Length = 312

 Score = 86.2 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
              ++                E   + P SF+  L+    G     +K+  ++ A   G 
Sbjct: 3   QPALNPLGETPRSNALPGTVLEAPQAQPASFTETLRGAIAGVNDAQQKSGALAKAFEMGD 62

Query: 70  --TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    Q++     ++ +R++++ A  +V  M +
Sbjct: 63  PSADLAKVMVASQQSQIAFRATVEVRNRLVQAYQDVMNMPL 103


>gi|222100199|ref|YP_002534767.1| Flagellar hook-basal body complex protein fliE [Thermotoga
           neapolitana DSM 4359]
 gi|221572589|gb|ACM23401.1| Flagellar hook-basal body complex protein fliE [Thermotoga
           neapolitana DSM 4359]
          Length = 94

 Score = 86.2 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
              +++ +    S   FS  L++  +      ++AE ++    QGK  ++ E +    +A
Sbjct: 9   GPIEDTGKVQKKSGGDFSKALKEALEKVNDIQKRAEKMTDDFAQGKISNIHEVIIEAEKA 68

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
              L L++ +R++I+ A  E+ +MQI
Sbjct: 69  SIALRLTVEVRNRIVEAYREIMRMQI 94


>gi|291278936|ref|YP_003495771.1| flagellar hook-basal body complex protein FliE [Deferribacter
           desulfuricans SSM1]
 gi|290753638|dbj|BAI80015.1| flagellar hook-basal body complex protein FliE [Deferribacter
           desulfuricans SSM1]
          Length = 100

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
              E   S  + FS LL++  K       +A+      L G+T  + E +  + +A+ +L
Sbjct: 19  KKTESKESKNVDFSELLKNAIKDVNNAQLQADEAVKKVLSGETKDIHETMIALQKADVSL 78

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + +R+K++ A  E+ + Q+
Sbjct: 79  KLMLEVRNKLIEAYQEIMRTQV 100


>gi|150021012|ref|YP_001306366.1| flagellar hook-basal body complex subunit FliE [Thermosipho
           melanesiensis BI429]
 gi|149793533|gb|ABR30981.1| flagellar hook-basal body complex subunit FliE [Thermosipho
           melanesiensis BI429]
          Length = 95

 Score = 83.9 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 14/107 (13%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M+++I G  ++                       S   FS +L D  K      +KAE +
Sbjct: 1   MVDKINGVGNY-------------GNLKPNTLKKSNADFSKILNDAIKEVNQQQKKAEQM 47

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           +     GK  ++ E +    +A  +L L++ +R+KI+ A  E+ +MQ
Sbjct: 48  ANDFATGKISNIHEVIVEAEKASISLRLTVEVRNKIVDAYKEIMRMQ 94


>gi|160903122|ref|YP_001568703.1| flagellar hook-basal body complex subunit FliE [Petrotoga mobilis
           SJ95]
 gi|160360766|gb|ABX32380.1| flagellar hook-basal body complex subunit FliE [Petrotoga mobilis
           SJ95]
          Length = 99

 Score = 83.5 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M E I G N         G+  +       +     + FS LL+D  +      + A+ V
Sbjct: 1   MTEGINGIN---------GIDPNKLAPEKTKQEDKNLDFSKLLKDAIEEVNSIQKNADKV 51

Query: 62  SLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +     G  T + + +    +A  +L L+  + ++I+ A  E+ +MQI
Sbjct: 52  AADYAAGNITDIHQVMIAAEKASLSLQLTTEVTNRIVEAYKEIMRMQI 99


>gi|260893876|ref|YP_003239973.1| flagellar hook-basal body complex subunit FliE [Ammonifex degensii
           KC4]
 gi|260866017|gb|ACX53123.1| flagellar hook-basal body complex subunit FliE [Ammonifex degensii
           KC4]
          Length = 94

 Score = 83.5 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
                    E       SFS  L            +A+      L GK  +   +    +
Sbjct: 8   SSPGAGVFPESRSPKGSSFSDYLNQFLDRLERARAEADTALRDFLTGKAELHTVMIAAQE 67

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A   L L++ LR+K++ A  E+S+MQI
Sbjct: 68  ARLWLELAVQLRNKLVEAYQEISRMQI 94


>gi|217077498|ref|YP_002335216.1| flagellar hook-basal body complex protein (FliE) [Thermosipho
           africanus TCF52B]
 gi|217037353|gb|ACJ75875.1| flagellar hook-basal body complex protein (FliE) [Thermosipho
           africanus TCF52B]
          Length = 95

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI++I G  ++                           F+ +L D  K      +KAE +
Sbjct: 1   MIDKINGVGNY-------------GNLKPSSVKKQNTDFTKILNDALKSVNDQQKKAEQM 47

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           +     GK  ++ E +    +A  +L L++ +R+KI+ A  E+ +MQ
Sbjct: 48  ADDFATGKISNIHEVIVEAEKASVSLRLTVEVRNKIVDAYKEIMRMQ 94


>gi|89895736|ref|YP_519223.1| hypothetical protein DSY2990 [Desulfitobacterium hafniense Y51]
 gi|122482005|sp|Q24T63|FLIE_DESHY RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|89335184|dbj|BAE84779.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 114

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 6/114 (5%)

Query: 1   MMIEQIQGT-----NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
           M I  I           ++              +          F   LQ+  +      
Sbjct: 1   MAINPIVPIHPLMLQQALNPIQENNPVEGNGPQTPAGAAKVGADFGQFLQEALQKVDNLQ 60

Query: 56  EKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A+  SL    G+   +  AV  + +A  +L+L++ +R++ L A  E+ +MQI
Sbjct: 61  KEADVASLGLATGQIQDLHTAVIAMEKAGLSLSLTVDVRNRALDAYHEIMRMQI 114


>gi|196247640|ref|ZP_03146342.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           G11MC16]
 gi|196212424|gb|EDY07181.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           G11MC16]
          Length = 98

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            +     +G+    T  +  +       F+A L++          +A+ ++   ++G   
Sbjct: 1   MLDGVSGVGLTPVSTVPNPVKPAEVQKQFAAFLKEALNNVNDKQIQADALTEKLVRGENV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A   L L+I +R+K + A  E+ +M +
Sbjct: 61  QLHDVMIAAQKASVALQLTIEIRNKAIEAYQEMMRMPL 98


>gi|325981194|ref|YP_004293596.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas sp.
           AL212]
 gi|325530713|gb|ADZ25434.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas sp.
           AL212]
          Length = 107

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
            G ++ +            T+        + + FS  L+            A+ +S   +
Sbjct: 4   NGIDNILQQLQAASALASGTKKQPGIDEVASVDFSEKLKSAIDQVNKSQLSADRLSEQFV 63

Query: 67  --QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             Q    + E +  + +A  +    + +R+K+++A  E+  MQ+
Sbjct: 64  SDQSNVDLHEVMISLQKANVSFQSMVQVRNKLVTAYQEIMNMQV 107


>gi|118443323|ref|YP_877974.1| flagellar hook-basal body protein FliE [Clostridium novyi NT]
 gi|118133779|gb|ABK60823.1| flagellar hook-basal body complex protein (FliE) [Clostridium novyi
           NT]
          Length = 103

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N FI  +          +       +    F  +L+           ++E V+   ++G
Sbjct: 3   INEFIPSSGIYSKIDSLNKEKATSSVNKSSEFQDVLKSQLDKVNEKQLESEQVTNDFIKG 62

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    +A+ ++ L++ +R+K+L A  E+++MQ+
Sbjct: 63  EDVEVHDVMIKNEEAKLSMQLAVQVRNKLLEAYQEINRMQV 103


>gi|138894739|ref|YP_001125192.1| flagellar hook-basal body protein FliE [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266252|gb|ABO66447.1| Flagellar hook-basal body protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 98

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            +     +G+    T  +  +       F+A L++          +A+ ++   ++G   
Sbjct: 1   MLDGVSRVGLTPVSTVPNPVKPAEVQKQFAAFLKEALNNVNDKQIQADALTEKLVRGENV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A   L L+I +R+K + A  E+ +M +
Sbjct: 61  QLHDVMIAAQKASVALQLTIEIRNKAIEAYQEMMRMPL 98


>gi|148270546|ref|YP_001245006.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           petrophila RKU-1]
 gi|170289252|ref|YP_001739490.1| flagellar hook-basal body complex subunit FliE [Thermotoga sp. RQ2]
 gi|281412854|ref|YP_003346933.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           naphthophila RKU-10]
 gi|147736090|gb|ABQ47430.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           petrophila RKU-1]
 gi|170176755|gb|ACB09807.1| flagellar hook-basal body complex subunit FliE [Thermotoga sp. RQ2]
 gi|281373957|gb|ADA67519.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           naphthophila RKU-10]
          Length = 94

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
                S +    +  +FS  L++  +      +KAE  +    QG+  ++ E +    +A
Sbjct: 9   GPLSQSGKTQKKNENNFSEALKEALEKVNDIQKKAEKAADDFAQGRISNIHEVIIEAEKA 68

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
              L L++ +R++I+ A  ++ +MQI
Sbjct: 69  SIALRLTVEVRNRIVEAYRDIMRMQI 94


>gi|220932526|ref|YP_002509434.1| flagellar hook-basal body complex subunit FliE [Halothermothrix
           orenii H 168]
 gi|219993836|gb|ACL70439.1| flagellar hook-basal body complex subunit FliE [Halothermothrix
           orenii H 168]
          Length = 100

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MMI  +            + +  D +   N     S  SF+ L+++          +A+ 
Sbjct: 1   MMINPVGN---------NVNLLSDGSNRLNRNEEVSYKSFADLIKEKIGDVNHLQVEADK 51

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     GK   + +      +A+  L L++A++ K++SA  E+ +MQI
Sbjct: 52  IARDFALGKVDDIHDVTIATEKAQLALKLTLAIQSKVVSAYKEIMRMQI 100


>gi|125972985|ref|YP_001036895.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum ATCC 27405]
 gi|256004782|ref|ZP_05429757.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum DSM 2360]
 gi|125713210|gb|ABN51702.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum ATCC 27405]
 gi|255991232|gb|EEU01339.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum DSM 2360]
 gi|316940779|gb|ADU74813.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum DSM 1313]
          Length = 104

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             + G N        I      T ++  E      SFS  L++  K      ++++ V+ 
Sbjct: 1   MAVNGINLVTPSVSGIDFTVGNTISNKNENVV--QSFSDYLKNAIKQVDELEKQSKAVAE 58

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GKT  + E +    +A+  +  ++ +R+KIL A +E+ +MQI
Sbjct: 59  DFAAGKTDNIHEVMIAAQKADIAIQFTLQIRNKILDAYNEIMRMQI 104


>gi|281417196|ref|ZP_06248216.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum JW20]
 gi|281408598|gb|EFB38856.1| flagellar hook-basal body complex subunit FliE [Clostridium
           thermocellum JW20]
          Length = 104

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             + G N        I      T ++  E      SFS  L++  K      +++  V+ 
Sbjct: 1   MAVNGINLVTPSVSGIDFTVGNTISNKNENVV--QSFSDYLKNAIKQVDELEKQSRAVAE 58

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GKT  + E +    +A+  +  ++ +R+KIL A +E+ +MQI
Sbjct: 59  DFAAGKTDNIHEVMIAAQKADIAIQFTLQIRNKILDAYNEIMRMQI 104


>gi|15644118|ref|NP_229167.1| flagellar hook-basal body complex protein FliE [Thermotoga maritima
           MSB8]
 gi|38503260|sp|Q9X186|FLIE_THEMA RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|4981926|gb|AAD36436.1|AE001790_8 flagellar hook-basal body complex protein FliE [Thermotoga maritima
           MSB8]
          Length = 94

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
                S +    S  +FS  L++  +      +KAE  +    QG+  ++ E +    +A
Sbjct: 9   GPLSQSGKTQKKSENNFSEALKEALEKVNDIQKKAEKAADDFAQGRISNIHEVIIEAEKA 68

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
              L L++ +R++I+ A  ++ +MQI
Sbjct: 69  SIALRLTVEVRNRIVEAYRDIMRMQI 94


>gi|313673745|ref|YP_004051856.1| flagellar hook-basal body complex subunit flie [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940501|gb|ADR19693.1| flagellar hook-basal body complex subunit FliE [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 99

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 48/98 (48%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           S I + + +        + ++    S +SFS +L+   +       +A+     A+ G+T
Sbjct: 2   SEIKNINLLLPNKLSEPSGSKSTEKSDLSFSDVLKKSIEQVNDAQLQADAAIKKAMSGET 61

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +  I +A+ +L L + +R+K+L A  ++ + Q+
Sbjct: 62  DIHDTMIAIQKADVSLKLMMEVRNKLLEAYQDIMRTQV 99


>gi|219670160|ref|YP_002460595.1| flagellar hook-basal body complex subunit FliE [Desulfitobacterium
           hafniense DCB-2]
 gi|254789306|sp|B8FTR7|FLIE_DESHD RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|219540420|gb|ACL22159.1| flagellar hook-basal body complex subunit FliE [Desulfitobacterium
           hafniense DCB-2]
          Length = 114

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
               ++              +          F   LQ+  +      ++A+  SL    G
Sbjct: 14  LQQNLNPIQENNPVEGSGPQTPAGAAKVGADFGQFLQEALQKVDNLQKEADVASLGLATG 73

Query: 69  KT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   +  AV  + +A  +L+L++ +R++ L A  E+ +MQI
Sbjct: 74  QIQDLHTAVIAMEKAGLSLSLTVDVRNRALDAYHEIMRMQI 114


>gi|218778521|ref|YP_002429839.1| flagellar hook-basal body complex subunit FliE [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759905|gb|ACL02371.1| Flagellar hook-basal body complex subunit FliE [Desulfatibacillum
           alkenivorans AK-01]
          Length = 96

 Score = 81.2 bits (199), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 43/95 (45%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           ++    +G +    Q   +       SF ++L+ M         KA++  +  L GKT +
Sbjct: 1   MNGVTGVGGQSVIAQEVKKAAAGEDGSFGSVLKKMVDSVNESQIKADDTVVQNLDGKTGI 60

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            EA+  + +A+  +   + +R+K L A  E+ +M 
Sbjct: 61  HEAMIALQEADINIRFLLQVRNKALDAYREIMRMP 95


>gi|58582223|ref|YP_201239.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426817|gb|AAW75854.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 171

 Score = 81.2 bits (199), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 16/123 (13%)

Query: 2   MIEQIQGTNSFISHTD--------------TIGMRYDFTQNSNEEGGSSPISFSALLQDM 47
           M + +    S I                    G +      +     +   SFS  L+  
Sbjct: 49  MSDSVTSILSQIRSYQTQMGQGPMRAVGDAARGNQIQGLAGAQGTPATQASSFSETLRSA 108

Query: 48  AKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
             G     ++A  +S A   G     +   +    Q++     ++ +R++++ A  +V  
Sbjct: 109 IGGVNEAQQRAGALSKAFEMGDPNADLARVMVASQQSQVAFRATVEVRNRLVQAYQDVMN 168

Query: 106 MQI 108
           M +
Sbjct: 169 MPL 171


>gi|253681755|ref|ZP_04862552.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum D str. 1873]
 gi|253561467|gb|EES90919.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum D str. 1873]
          Length = 101

 Score = 80.8 bits (198), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 46/101 (45%), Gaps = 3/101 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N FI             ++S +E   + I F   L+           +++ V+   ++G
Sbjct: 3   INEFIPSEGIYSQVNSIHKDSKKE--DNNIGFGETLKKQLNEVNEKQLESQKVTEDFIKG 60

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    +A+ +L L++ +R+K++ A  E+++MQ+
Sbjct: 61  EDVEVHDVMIKNEEAKLSLQLAVQVRNKLMEAYQEINRMQV 101


>gi|331269313|ref|YP_004395805.1| flagellar hook-basal body complex protein (FliE) [Clostridium
           botulinum BKT015925]
 gi|329125863|gb|AEB75808.1| flagellar hook-basal body complex protein (FliE) [Clostridium
           botulinum BKT015925]
          Length = 101

 Score = 80.4 bits (197), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N FI             +   +E   + I F   L+           +++ ++   ++G
Sbjct: 3   INEFIPSKGIYSQVNSIHKEEKKE--DNNIGFGETLKKQLNEVNEKQLESQKIAEDFIKG 60

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    +A+ +L L++ +R+K++ A  E+++MQ+
Sbjct: 61  EDVEVHDVMIKNEEAKLSLQLAVQVRNKLMEAYQEINRMQV 101


>gi|255523705|ref|ZP_05390671.1| flagellar hook-basal body complex subunit FliE [Clostridium
           carboxidivorans P7]
 gi|296186709|ref|ZP_06855111.1| flagellar hook-basal body complex protein FliE [Clostridium
           carboxidivorans P7]
 gi|255512574|gb|EET88848.1| flagellar hook-basal body complex subunit FliE [Clostridium
           carboxidivorans P7]
 gi|296048746|gb|EFG88178.1| flagellar hook-basal body complex protein FliE [Clostridium
           carboxidivorans P7]
          Length = 103

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N F+  +           + N    +  + F   L+           K+E+ + + ++G
Sbjct: 3   INEFVPDSKIFQGIGIGNNDKNGNAETQSVGFGEFLKGKLDEVNAQQIKSEDTTESFIKG 62

Query: 69  K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             T++ + +    +A+ +L L++ +R+K + A  E+++ Q+
Sbjct: 63  DETNIHKVMLDTEEAKMSLELAVQIRNKFVEAYQELNRTQL 103


>gi|20807890|ref|NP_623061.1| flagellar hook-basal body protein FliE [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516455|gb|AAM24665.1| Flagellar hook-basal body protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 98

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
            I+    I        N+     S   SFS  L++          +A       + G+  
Sbjct: 1   MINQITGIQPVTLTETNNIAPSTSKINSFSDFLKEALNKVNDLQLQAIEDDKKLVTGEID 60

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +   ++A+  L L+I +++K+L A  E+ +M +
Sbjct: 61  DINKVMIDAVKADIALQLTIQIKNKVLEAYQEIMRMPL 98


>gi|168183268|ref|ZP_02617932.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum Bf]
 gi|237796103|ref|YP_002863655.1| flagellar hook-basal body protein FliE [Clostridium botulinum Ba4
           str. 657]
 gi|182673620|gb|EDT85581.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum Bf]
 gi|229261204|gb|ACQ52237.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum Ba4 str. 657]
          Length = 104

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  +SFS +L+D   G      KA+N + A ++G    +   + +  +A
Sbjct: 19  NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDEVDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|226950076|ref|YP_002805167.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A2 str. Kyoto]
 gi|226844224|gb|ACO86890.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A2 str. Kyoto]
          Length = 104

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  + FS +L+D   G      KA+N + A ++G    +   + +  +A
Sbjct: 19  NFINKNEKTENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|192361742|ref|YP_001982190.1| flagellar hook-basal body complex protein FliE [Cellvibrio
           japonicus Ueda107]
 gi|226704224|sp|B3PEY6|FLIE_CELJU RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|190687907|gb|ACE85585.1| flagellar hook-basal body complex protein (FliE) [Cellvibrio
           japonicus Ueda107]
          Length = 124

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSM 72
                G+          E  +   SF  L+           + +  ++ A  +G     +
Sbjct: 29  ALRGEGLHNGMRTLEGVEQPTKVPSFGDLMTQAVSKVNETQKASSAMADAYERGVAGVDI 88

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +    ++      ++ +R+K++ A  +V  M I
Sbjct: 89  TDVMIASQKSSIAFQATVQVRNKLIEAYRDVMNMPI 124


>gi|153939516|ref|YP_001391963.1| flagellar hook-basal body protein FliE [Clostridium botulinum F
           str. Langeland]
 gi|152935412|gb|ABS40910.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum F str. Langeland]
          Length = 104

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  +SFS +L+D   G      KA+N + A ++G    +   + +  +A
Sbjct: 19  NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|268316358|ref|YP_003290077.1| flagellar hook-basal body complex subunit FliE [Rhodothermus
           marinus DSM 4252]
 gi|262333892|gb|ACY47689.1| flagellar hook-basal body complex subunit FliE [Rhodothermus
           marinus DSM 4252]
          Length = 102

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
           + +     +    +    +     S    F+  L    +      + A+    A + G +
Sbjct: 4   AELQRLRQLSGGDERRLPTPRSRESVDGGFADTLAQAIQEVDRAQKDADEQVEAFIAGEQ 63

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ E +  + QA     L   +R+++L    E+ + QI
Sbjct: 64  ENLHEVMISMNQARLYFQLMTEVRNRLLETYQELMRTQI 102


>gi|148380621|ref|YP_001255162.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932224|ref|YP_001384907.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
           str. ATCC 19397]
 gi|153936171|ref|YP_001388376.1| flagellar hook-basal body protein FliE [Clostridium botulinum A
           str. Hall]
 gi|148290105|emb|CAL84224.1| flagellar hook-basal body complex protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928268|gb|ABS33768.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A str. ATCC 19397]
 gi|152932085|gb|ABS37584.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A str. Hall]
          Length = 104

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  +SFS +L+D   G      KA+N + A ++G  T +   + +  +A
Sbjct: 19  NFINKNEKTENTKSVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDETDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|157362950|ref|YP_001469717.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           lettingae TMO]
 gi|157313554|gb|ABV32653.1| flagellar hook-basal body complex subunit FliE [Thermotoga
           lettingae TMO]
          Length = 97

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 12/108 (11%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M+++I G N  ++  +              E   S   F+ + +          + AE +
Sbjct: 1   MVDKISGINQDLNSLNQTS-----------EKKKSENDFAEIFKSAINKVNQIQKNAEQM 49

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S     GK  ++ E +    +A   L L+  +R++I+ A  E+ +MQ+
Sbjct: 50  SADFALGKISNIHEVIIEAEKASIALKLTTEVRNRIVEAYREIMRMQL 97


>gi|168180912|ref|ZP_02615576.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum NCTC 2916]
 gi|182668256|gb|EDT80235.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum NCTC 2916]
 gi|322806994|emb|CBZ04564.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum H04402 065]
          Length = 104

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  +SFS +L+D   G      KA+N + A ++G  T +   + +  +A
Sbjct: 19  NFINKNEKTENTESVSFSEILKDKLDGVNAKQVKADNSTEAFIKGDETDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|187778747|ref|ZP_02995220.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
           15579]
 gi|187772372|gb|EDU36174.1| hypothetical protein CLOSPO_02342 [Clostridium sporogenes ATCC
           15579]
          Length = 104

 Score = 78.9 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERT 85
             + +   +  +SFS +L+D   G      KA+N + + ++G+   +   + +  +A+ +
Sbjct: 22  NGNEKTENTEKVSFSEVLKDKLDGVNAKQVKADNSTQSFIKGEEIDIHNVMLNAEEAKMS 81

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L++ +R+K++ A  E+S+MQ+
Sbjct: 82  MELAVQVRNKLVEAYQELSRMQL 104


>gi|326204627|ref|ZP_08194483.1| flagellar hook-basal body complex subunit FliE [Clostridium
           papyrosolvens DSM 2782]
 gi|325985194|gb|EGD46034.1| flagellar hook-basal body complex subunit FliE [Clostridium
           papyrosolvens DSM 2782]
          Length = 102

 Score = 78.9 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALR 93
           +  +SF   L+           ++  +      GKT  + E +    +A   L  ++ +R
Sbjct: 28  TPEVSFGDYLKSALTKVTDLENQSNKLQEDFALGKTDNIPEVLIAGEKASVALQFTMQIR 87

Query: 94  DKILSAVSEVSKMQI 108
           +KIL A SE+ +MQI
Sbjct: 88  NKILDAYSEIMRMQI 102


>gi|90021834|ref|YP_527661.1| hypothetical protein Sde_2189 [Saccharophagus degradans 2-40]
 gi|123396024|sp|Q21IN0|FLIE_SACD2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|89951434|gb|ABD81449.1| flagellar hook-basal body complex protein (FliE) [Saccharophagus
           degradans 2-40]
          Length = 121

 Score = 78.9 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I   +  N  ++    +G   +   N+      +   F  LL+          + +  
Sbjct: 12  MEIRSFKAQNQAMNSVQGVGNSLEGVNNTRGTQQVNGPRFGELLEQAVSKVNEVQQASGA 71

Query: 61  VSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S A +QG ++  + + +    +A    +  + +R+K++ A  +V  M I
Sbjct: 72  MSQAYIQGDSNVGITDVMIASQKAGVAFDAMVQVRNKLVEAYKDVMNMPI 121


>gi|170756175|ref|YP_001782280.1| flagellar hook-basal body protein FliE [Clostridium botulinum B1
           str. Okra]
 gi|169121387|gb|ACA45223.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum B1 str. Okra]
          Length = 104

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  + FS +L+D   G      KA+N + A ++G    +   + +  +A
Sbjct: 19  NFINKNEKAENTESVGFSEILKDKLDGVNAKQVKADNSTEAFIKGDEIDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|169831912|ref|YP_001717894.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Desulforudis audaxviator MP104C]
 gi|169638756|gb|ACA60262.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 102

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
            +  D  + S  +   +   F  +L +          +A+      L G+   + + +  
Sbjct: 13  ALGTDGCRRSGGQAAHTGGDFGRILNEAVNRLNESQVRADTAVRQFLAGEVQDVHQVIIA 72

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +AE T+ L++ +R++IL A  E+S+  +
Sbjct: 73  LREAELTMQLAVEVRNRILEAYQELSRTPL 102


>gi|238788333|ref|ZP_04632127.1| Flagellar hook-basal body complex protein fliE [Yersinia
           frederiksenii ATCC 33641]
 gi|238723579|gb|EEQ15225.1| Flagellar hook-basal body complex protein fliE [Yersinia
           frederiksenii ATCC 33641]
          Length = 140

 Score = 78.1 bits (191), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A   + 
Sbjct: 38  MSVQGIEGVLQQLQVTALQASNSAKTMPAEA----GFASELKAAIGKISENQQHARTQAQ 93

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++  +L L I +R+K+++A  +V  M +
Sbjct: 94  NFELGVPGVGLNDVMVDMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 140


>gi|83647862|ref|YP_436297.1| flagellar hook-basal body complex protein FliE [Hahella chejuensis
           KCTC 2396]
 gi|83635905|gb|ABC31872.1| flagellar hook-basal body complex protein (FliE) [Hahella
           chejuensis KCTC 2396]
          Length = 118

 Score = 78.1 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  I+   + +  +  +       Q            FS +L+          + +  + 
Sbjct: 11  LADIRNLRAQMRQSARVEQELSAEQLKPTRKPEEVPEFSQMLKQAVDNVNDLQKTSSELR 70

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A  QG  +  + + +    ++         +R+K++ A  ++ KM I
Sbjct: 71  TAYEQGDPQADLTKVMIASQKSSVAFQALTQVRNKVVQAYEDIMKMPI 118


>gi|220929469|ref|YP_002506378.1| flagellar hook-basal body complex subunit FliE [Clostridium
           cellulolyticum H10]
 gi|219999797|gb|ACL76398.1| flagellar hook-basal body complex subunit FliE [Clostridium
           cellulolyticum H10]
          Length = 102

 Score = 78.1 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALR 93
           +  +SF   L+          ++A+N+      GKT  + E +    +A   L  ++ +R
Sbjct: 28  TPEVSFGDYLKSALTKVSDLEDQAKNLQEDFALGKTDNIPEVLIAGEKASVALQFTMQIR 87

Query: 94  DKILSAVSEVSKMQI 108
           +KIL A SE+ +MQI
Sbjct: 88  NKILDAYSEIMRMQI 102


>gi|188586016|ref|YP_001917561.1| flagellar hook-basal body complex subunit FliE [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350703|gb|ACB84973.1| flagellar hook-basal body complex subunit FliE [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 96

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MR 73
             + IG       N   +  +  ++F   L D         +++E ++     G+   + 
Sbjct: 2   RIEGIGENTVNPINQGNKQKAEDLNFREFLSDAISKVDDIQKESEVLNQKLAVGEVDNLH 61

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + V    +AE  LNL++ +R++++    E+ +MQI
Sbjct: 62  DVVIATEKAELALNLTLEVRNQLIETHDELMRMQI 96


>gi|222053601|ref|YP_002535963.1| flagellar hook-basal body complex subunit FliE [Geobacter sp.
           FRC-32]
 gi|221562890|gb|ACM18862.1| flagellar hook-basal body complex subunit FliE [Geobacter sp.
           FRC-32]
          Length = 102

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTL 86
                G +   SFS  L +M          A+    +   G+ + + E +  + +A  + 
Sbjct: 21  AKETAGAAPAESFSKYLGEMVGKVNDMQLSADKSIQSLATGEATGLHEVMLAVEKASISF 80

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
                +R+K + A  E+ +M +
Sbjct: 81  QFLNQVRNKAVEAYQEIMRMPV 102


>gi|149182502|ref|ZP_01860975.1| flagellar hook-basal body protein [Bacillus sp. SG-1]
 gi|148849762|gb|EDL63939.1| flagellar hook-basal body protein [Bacillus sp. SG-1]
          Length = 101

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 33  GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIA 91
              +  +F+  L+   +      ++++ ++   ++G    + + +    +A  TL  ++ 
Sbjct: 25  PVQNQQNFADFLKKSIEEVSASQKESDMMTEKLVRGENVDLHQVMIASQKASITLQTTME 84

Query: 92  LRDKILSAVSEVSKMQI 108
           +R+K++ A  EV +M +
Sbjct: 85  VRNKVIEAYQEVMRMPM 101


>gi|295696112|ref|YP_003589350.1| flagellar hook-basal body complex subunit FliE [Bacillus tusciae
           DSM 2912]
 gi|295411714|gb|ADG06206.1| flagellar hook-basal body complex subunit FliE [Bacillus tusciae
           DSM 2912]
          Length = 101

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
            +   ++         S  E       F  L            ++A+++    + G+   
Sbjct: 5   ANAIGSVSAALPSATPSAPEPSRPSGGFGELFGRALDQVDALQQRADHIVAQFVAGQGPD 64

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + +    QA   L   + +RD+ ++A  ++ +MQI
Sbjct: 65  VHDVMIAAQQAYLALQTVVQIRDRAVAAYQDIMRMQI 101


>gi|94500268|ref|ZP_01306801.1| flagellar hook-basal body complex protein (FliE) [Oceanobacter sp.
           RED65]
 gi|94427567|gb|EAT12544.1| flagellar hook-basal body complex protein (FliE) [Oceanobacter sp.
           RED65]
          Length = 133

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 33  GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSI 90
              +   F  +  +   G       + ++     +G     + E +    +A  + +   
Sbjct: 56  PDPNTPDFQTMFANAINGVRDKQAVSSDLKQRFERGDPMVDLPEVMIAAQKASVSFDAMK 115

Query: 91  ALRDKILSAVSEVSKMQI 108
            +R+K++ A  ++  M +
Sbjct: 116 EVRNKLVEAYKDIMNMPV 133


>gi|82702473|ref|YP_412039.1| flagellar hook-basal body protein FliE [Nitrosospira multiformis
           ATCC 25196]
 gi|82410538|gb|ABB74647.1| flagellar hook-basal body complex protein (FliE) [Nitrosospira
           multiformis ATCC 25196]
          Length = 115

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 4   EQIQGTNSFISHTDTIG--------MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
             I   +S ++                            +  + F+ + +          
Sbjct: 1   MDISNIDSMLTQLRAGAALAGGKAGSVGTIASGDETGSEAGRVDFATVFRRSLDQVNNVQ 60

Query: 56  EKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A  ++     G  + ++ EA+  + +A  +   ++ +R+K+++A  ++  M +
Sbjct: 61  QHASKLARDFELGAPEANLTEAMISLQKASISFQYTVQVRNKLVAAYQDIMNMPV 115


>gi|83589622|ref|YP_429631.1| flagellar hook-basal body complex protein (FliE) [Moorella
           thermoacetica ATCC 39073]
 gi|83572536|gb|ABC19088.1| flagellar hook-basal body complex protein (FliE) [Moorella
           thermoacetica ATCC 39073]
          Length = 102

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
              ++     +      +   SF  LL+          ++A+ ++     GK   + + +
Sbjct: 11  PAPLQETRPVSQTGGTDAVAQSFGNLLRQKLDELNNLQQQADALTQEYFAGKVEDVHQVM 70

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A  +L L++ +R+K + A  E+S+MQI
Sbjct: 71  LALEEANLSLQLAMQVRNKAVEAYQEISRMQI 102


>gi|154250383|ref|YP_001411208.1| flagellar hook-basal body complex subunit FliE [Fervidobacterium
           nodosum Rt17-B1]
 gi|154154319|gb|ABS61551.1| flagellar hook-basal body complex subunit FliE [Fervidobacterium
           nodosum Rt17-B1]
          Length = 96

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 13/107 (12%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MIE+I G N+ I +      +   ++            FS +L D  +      +  E +
Sbjct: 1   MIERINGVNNQIQNISNTQSKSGNSE------------FSKILSDALQSVNEQQKNVEQM 48

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           S    +GK  ++ E V    +A  +L L++ +R++I+ A  E+ +MQ
Sbjct: 49  SDDFAKGKISNIHELVVEAEKASISLRLTVEVRNRIVDAYREIMRMQ 95


>gi|158320511|ref|YP_001513018.1| flagellar hook-basal body protein FliE [Alkaliphilus oremlandii
           OhILAs]
 gi|158140710|gb|ABW19022.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
           oremlandii OhILAs]
          Length = 99

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           IS+ + +      + ++++E     ISFS+ L +     +   +++++ ++  + G+   
Sbjct: 3   ISNINQLTPIKLNSTSTSKERSDDTISFSSFLNESLNKVVELEKESQDYTMKLVTGEIDN 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + +    +A+  L L++ +R+K+L A  E+ +MQI
Sbjct: 63  LSDVMIAAEKADIALQLTMQIRNKVLDAYREIMRMQI 99


>gi|85858816|ref|YP_461018.1| flagellar hook-basal body complex protein [Syntrophus
           aciditrophicus SB]
 gi|85721907|gb|ABC76850.1| flagellar hook-basal body complex protein [Syntrophus
           aciditrophicus SB]
          Length = 101

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDHI 79
                 Q    E     +SFS +L++  +        A+            S+ EA+  +
Sbjct: 13  PSAFPEQKVEIEPAEGKVSFSDVLRNTIQDINKLQSDADEAISGVQVHDTGSIHEAMIAL 72

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  +    + +R+KI+ A  EV +MQ+
Sbjct: 73  EKASISFQTMMQVRNKIIDAYQEVMRMQV 101


>gi|37199415|dbj|BAC95246.1| flagellar hook-basal body protein FliE [Vibrio vulnificus YJ016]
          Length = 122

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 2/92 (2%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREAV 76
             M       +   G      FS LL           + + ++     +G     + + +
Sbjct: 31  AMMLEASNTTAPATGAKVSADFSTLLNQAINNVNSLQKSSSDLQTRFDRGDADVSLSDVM 90

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               ++      ++ +R+K++ A  ++  M +
Sbjct: 91  IARNKSSVAFEATVQVRNKLVEAYKDLMNMPV 122


>gi|289578435|ref|YP_003477062.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           italicus Ab9]
 gi|297544711|ref|YP_003677013.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|289528148|gb|ADD02500.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           italicus Ab9]
 gi|296842486|gb|ADH61002.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 98

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
            ++    +      +     + GS   +FS  L++           A       + G+  
Sbjct: 1   MVNQITPVNPVSLNSTLETTQSGSKIETFSDFLKEALNKVNDLQLTAMKNDRKLVTGEID 60

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A+  L L+I +++K+L A  E+ +M +
Sbjct: 61  DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98


>gi|17548610|ref|NP_521950.1| flagellar hook-basal body protein FliE [Ralstonia solanacearum
           GMI1000]
 gi|300696959|ref|YP_003747620.1| flagellar hook-basal body complex protein fliE [Ralstonia
           solanacearum CFBP2957]
 gi|38503107|sp|Q8XSS8|FLIE_RALSO RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|17430858|emb|CAD17540.1| probable flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum GMI1000]
 gi|299073683|emb|CBJ53203.1| Flagellar hook-basal body complex protein fliE [Ralstonia
           solanacearum CFBP2957]
          Length = 110

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I       S ++       +      S  +     I F A+L+          +KAE 
Sbjct: 1   MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   L  ++ +R+K++SA   +  M I
Sbjct: 61  LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSAYQNIMSMSI 110


>gi|254437554|ref|ZP_05051048.1| flagellar hook-basal body complex protein FliE [Octadecabacter
           antarcticus 307]
 gi|198253000|gb|EDY77314.1| flagellar hook-basal body complex protein FliE [Octadecabacter
           antarcticus 307]
          Length = 113

 Score = 76.2 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I  I   N+  +      M       +         SF   ++D           A  + 
Sbjct: 7   INSISSINATDAINRAKEMTEQAAGGAILGPRDEGPSFGDRMRDSLDSVARAQGDAAQLV 66

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G +T + + +     +     L++ +R+K LSA  ++  M +
Sbjct: 67  KDYETGKETDLTKVMVAQQVSSLGFQLTLNVRNKALSAYRDIMNMPV 113


>gi|163781741|ref|ZP_02176741.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882961|gb|EDP76465.1| flagellar hook-basal body protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 97

 Score = 76.2 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 36  SPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRD 94
           SP  F+  L++         E A+NV  A L+G    +   V    +A   LNL I +R+
Sbjct: 24  SPEDFADALKEFVLWVNSQQENAKNVKEAVLRGEDVPLHRMVIEFEKAGVALNLMIEVRN 83

Query: 95  KILSAVSEVSKMQI 108
           ++L    E+ +MQ+
Sbjct: 84  RLLEGYQELLRMQV 97


>gi|327399354|ref|YP_004340223.1| Flagellar hook-basal body complex protein fliE [Hippea maritima DSM
           10411]
 gi|327181983|gb|AEA34164.1| Flagellar hook-basal body complex protein fliE [Hippea maritima DSM
           10411]
          Length = 99

 Score = 76.2 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
               N+ +       SF+ +L+           KA+        GK  ++++AV  I +A
Sbjct: 14  SQIDNNPKAEKPEGDSFADILKKSLDEVNKLQNKADESIKDIASGKMENIQDAVMAIEKA 73

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + +L L   +R+K + A  EV +MQ+
Sbjct: 74  DVSLKLLTEIRNKAIEAYKEVMRMQV 99


>gi|261855053|ref|YP_003262336.1| flagellar hook-basal body complex subunit FliE [Halothiobacillus
           neapolitanus c2]
 gi|261835522|gb|ACX95289.1| flagellar hook-basal body complex subunit FliE [Halothiobacillus
           neapolitanus c2]
          Length = 113

 Score = 76.2 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M ++QI      +   +                 +   SFS+LL           + +  
Sbjct: 5   MSVDQILSQMRVMRQ-EATQRLAQPASVPPTVSPAGGDSFSSLLTKAIGQVNDLQQNSSQ 63

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +      G     + + +    +A    N ++ +R++++ A  ++  M +
Sbjct: 64  LKTRFELGDPNVDLTQVMLASQKASLGFNATLQVRNRLVQAYQDIMNMPV 113


>gi|114566384|ref|YP_753538.1| flagellar hook-basal body protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337319|gb|ABI68167.1| flagellar hook-basal body protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 102

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
             +      G+         +   +    F   L++  +      ++A + +     G  
Sbjct: 4   GALDSIALAGINPGQPSVMKDSPANKEGGFFNYLKEALQEVDELQKEAASSAEKLALGDE 63

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           T +   +    +A   L L++ +R+K++ A  E+ +MQ+
Sbjct: 64  TYLHNTILAYEKANLALQLTVEVRNKLVEAYQELMRMQM 102


>gi|163794132|ref|ZP_02188105.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
 gi|159180746|gb|EDP65265.1| Flagellar hook-basal body protein [alpha proteobacterium BAL199]
          Length = 98

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 41/92 (44%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
             +        N      +    F+  ++D A  AI  + + E+VS   + GK  + + V
Sbjct: 7   GPLPPVAGGGANMASGPTAGNKDFANYVRDAASEAIDSLHRGEDVSKEGIAGKADLTDVV 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +  AE TL     LRDK++SA  E+ ++ I
Sbjct: 67  AAVNDAELTLQTVTTLRDKLVSAYQEILRIPI 98


>gi|148266224|ref|YP_001232930.1| flagellar hook-basal body complex subunit FliE [Geobacter
           uraniireducens Rf4]
 gi|146399724|gb|ABQ28357.1| flagellar hook-basal body complex subunit FliE [Geobacter
           uraniireducens Rf4]
          Length = 102

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 34  GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIAL 92
            +    FS  L +M          A+    +   G++  + E +  + +A  +      +
Sbjct: 27  AAPAEDFSKYLGEMVGKVNEMQVTADKSIQSLAVGESKGLHEVMLAVEKASISFQFLSQV 86

Query: 93  RDKILSAVSEVSKMQI 108
           R+K + A  EV +M +
Sbjct: 87  RNKAVEAYQEVMRMPV 102


>gi|153953777|ref|YP_001394542.1| flagellar hook-basal body protein FliE [Clostridium kluyveri DSM
           555]
 gi|219854393|ref|YP_002471515.1| hypothetical protein CKR_1050 [Clostridium kluyveri NBRC 12016]
 gi|146346658|gb|EDK33194.1| FliE [Clostridium kluyveri DSM 555]
 gi|219568117|dbj|BAH06101.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 102

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKI 96
             F+++L++          +A N +   +QG    +   +    +A+ +L L++ +R+K 
Sbjct: 31  SDFASVLKNELDEVNNKQIEANNSTEEFIQGDRVDIHNVMLDTEEAKMSLELAVQIRNKF 90

Query: 97  LSAVSEVSKMQI 108
           + A  E+++ QI
Sbjct: 91  VEAYQELNRTQI 102


>gi|56419753|ref|YP_147071.1| flagellar hook-basal body protein FliE [Geobacillus kaustophilus
           HTA426]
 gi|261419418|ref|YP_003253100.1| flagellar hook-basal body protein FliE [Geobacillus sp. Y412MC61]
 gi|319766233|ref|YP_004131734.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           Y412MC52]
 gi|56379595|dbj|BAD75503.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
 gi|261375875|gb|ACX78618.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           Y412MC61]
 gi|317111099|gb|ADU93591.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           Y412MC52]
          Length = 98

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            I     IG+      +   +   +   F+A  ++          +A+ ++   ++G   
Sbjct: 1   MIDGASRIGLTMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A  TL L++ +R+K + A  E+ +M +
Sbjct: 61  QLHDVMIAAQKASITLQLTLEIRNKAIEAYQEMMRMPL 98


>gi|308048751|ref|YP_003912317.1| flagellar hook-basal body complex subunit FliE [Ferrimonas
           balearica DSM 9799]
 gi|307630941|gb|ADN75243.1| flagellar hook-basal body complex subunit FliE [Ferrimonas
           balearica DSM 9799]
          Length = 104

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 2/91 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVD 77
            +  +   ++          FS+ L +      G    A +++     G    S+ + + 
Sbjct: 14  SLAREAGSSAELAPVKPQQDFSSFLSNAIDHVNGLQMNASDMATRLELGDSRVSLSDTMI 73

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +A      ++ +R+K++ A  E+  M +
Sbjct: 74  AKEKAGVAFEATVQVRNKLVEAYKEIMNMPV 104


>gi|332799172|ref|YP_004460671.1| Flagellar hook-basal body complex protein fliE [Tepidanaerobacter
           sp. Re1]
 gi|332696907|gb|AEE91364.1| Flagellar hook-basal body complex protein fliE [Tepidanaerobacter
           sp. Re1]
          Length = 95

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV-SLAALQGKTSMREAVD 77
           +    D   N          SF  +  D+ + A    ++ E++        +  +   + 
Sbjct: 5   VDNTRDINNNFEALKTQGDKSFGKIFSDVLESANTYQKEYESLLGREVFSDEIDLHNVLI 64

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +A+ +L L++ +R+K + A  E+ +MQI
Sbjct: 65  AGEKAKISLELTLQIRNKAMEAYQEIMRMQI 95


>gi|308273185|emb|CBX29788.1| hypothetical protein N47_F14830 [uncultured Desulfobacterium sp.]
          Length = 96

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 38/80 (47%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLN 87
            S     ++   F  ++++         ++ +   +  LQGK  +   + ++ +AE ++ 
Sbjct: 16  KSEGITSNNSTGFKEVIKNAIDNVNSTEKEGDKSIVNLLQGKEDVHTTMINLQKAEISMK 75

Query: 88  LSIALRDKILSAVSEVSKMQ 107
           + +++R+K L A  E+  MQ
Sbjct: 76  MLLSVRNKALEAYKEIMHMQ 95


>gi|300693363|ref|YP_003749336.1| flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum PSI07]
 gi|299075400|emb|CBJ34695.1| Flagellar hook-basal body complex protein fliE [Ralstonia
           solanacearum PSI07]
          Length = 110

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I       S ++       +      S  +     I F A+L+          +KAE 
Sbjct: 1   MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDSAKVSIDFGAVLKSSLDKVDASQQKAET 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   L  ++ +R+K++SA   +  M I
Sbjct: 61  LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSAYQNIMSMSI 110


>gi|83747629|ref|ZP_00944665.1| FliE [Ralstonia solanacearum UW551]
 gi|207739710|ref|YP_002258103.1| flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum IPO1609]
 gi|83725681|gb|EAP72823.1| FliE [Ralstonia solanacearum UW551]
 gi|206593092|emb|CAQ59998.1| flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum IPO1609]
          Length = 110

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I       S ++       +      S  +     I F A+L+          +KAE 
Sbjct: 1   MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   L  ++ +R+K++SA   +  M I
Sbjct: 61  LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKVVSAYQNIMSMSI 110


>gi|254506893|ref|ZP_05119032.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus 16]
 gi|219550178|gb|EED27164.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus 16]
          Length = 103

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            + F S    +      T+ +   G +    F  LL +         + + ++     +G
Sbjct: 3   IDGFQSEMQAMMFEAGNTKPA-VTGHTVGADFGELLNNAINNVNSLSKASGDLQTRFDRG 61

Query: 69  --KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  DENVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|323490141|ref|ZP_08095361.1| flagellar hook-basal body protein FliE [Planococcus donghaensis
           MPA1U2]
 gi|323396189|gb|EGA89015.1| flagellar hook-basal body protein FliE [Planococcus donghaensis
           MPA1U2]
          Length = 98

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKI 96
             F  + +D  +       +++ ++   + G+   + E +    +A  +L +++ +R+K+
Sbjct: 27  EGFGQIFKDALQEVSAAQNESDKLTNQLITGEVQDVHEVMIASQKASLSLQMTMQVRNKV 86

Query: 97  LSAVSEVSKMQI 108
           + A  EV +MQ+
Sbjct: 87  VEAYQEVMRMQV 98


>gi|87119488|ref|ZP_01075385.1| flagellar hook-basal body complex protein FliE [Marinomonas sp.
           MED121]
 gi|86164964|gb|EAQ66232.1| flagellar hook-basal body complex protein FliE [Marinomonas sp.
           MED121]
          Length = 121

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q++   S +             Q   E G      F+ +L+D         ++A++++
Sbjct: 14  LSQMRDMKSQVQQPGVNTPSLSDAQKVEESGDIERADFAQMLKDAVDNVNSLQQEAKSLA 73

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A  +G     + + +  + ++  +      +R+K++ A  ++  M I
Sbjct: 74  QAYERGDENVDLPQVMIGLQKSSVSFEAMTQVRNKLVDAYEKIMNMPI 121


>gi|297530607|ref|YP_003671882.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           C56-T3]
 gi|297253859|gb|ADI27305.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           C56-T3]
          Length = 98

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            I     IG+      +   +   +   F+A  ++          +A+ ++   ++G   
Sbjct: 1   MIDGASRIGLTMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A  TL L++ +R+K + A  E+ +M +
Sbjct: 61  QLHDVIIAAQKASITLQLTLEIRNKAIEAYQEMMRMPL 98


>gi|170761355|ref|YP_001787984.1| flagellar hook-basal body protein FliE [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408344|gb|ACA56755.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 104

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQA 82
           +F   + +   +  +SFS +L+D   GA     KA N + A ++G    +   + +  +A
Sbjct: 19  NFINKNEKTENTESVSFSEILKDKLDGANAKQVKANNSTEAFIKGDEIDIHNVMLNAEEA 78

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ L++ +R+K++ A  E+S+MQ+
Sbjct: 79  KMSMELAVQVRNKLVEAYQELSRMQL 104


>gi|289523575|ref|ZP_06440429.1| flagellar hook-basal body complex protein FliE [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503267|gb|EFD24431.1| flagellar hook-basal body complex protein FliE [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 89

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNL 88
            E   ++  SF   L+   +       +AE      + G    + + V  + +AE  L L
Sbjct: 10  PETKKTNKESFEDHLKKGFENVNNLQLRAEREVQKLVTGDVDDISQVVTAVAEAEIALRL 69

Query: 89  SIALRDKILSAVSEVSKMQI 108
            + +RDK++ A  ++S++ +
Sbjct: 70  FVEVRDKLVDAYQQLSRIPV 89


>gi|239826612|ref|YP_002949236.1| flagellar hook-basal body protein FliE [Geobacillus sp. WCH70]
 gi|239806905|gb|ACS23970.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           WCH70]
          Length = 100

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MMI+ I           ++        +   +   +  +FS  L+D       +  +A  
Sbjct: 1   MMIQGIH---------RSLFSEATNVASQATKPADAQKAFSTFLKDALNKVNDEQLQASQ 51

Query: 61  VSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++   ++G    + + +    +A  +L L++ +R+K++ A  E+ +MQI
Sbjct: 52  LTEKLVKGENVDLHKVMIASQKASISLQLTLEVRNKVIEAYQEMMRMQI 100


>gi|167465321|ref|ZP_02330410.1| flagellar hook-basal body protein FliE [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 104

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDH 78
            ++    + +      +   F + L D            ++++   ++G+ T + + +  
Sbjct: 15  QVQDVQDKTNPAGAAQATEKFGSFLLDAIDDLNKQQLSVDDMNQKFVKGEITDIHQLMVA 74

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A   L L++ +R+K + A  ++ ++QI
Sbjct: 75  SEKASLGLELAVQVRNKAIEAYQDIMRIQI 104


>gi|78044773|ref|YP_359839.1| flagellar hook-basal body complex protein FliE [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996888|gb|ABB15787.1| flagellar hook-basal body complex protein FliE [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 95

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 29  SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLN 87
           +N    +  + F   L +          KAE  +   L GK   + + +    +A+ +L 
Sbjct: 15  NNSAQSTKTLDFEKKLAEALDKVNEKQLKAEQATQDFLAGKVDDIHQVLILAQEAKLSLE 74

Query: 88  LSIALRDKILSAVSEVSKMQI 108
           L++ +R+KI+ A  E+S+MQI
Sbjct: 75  LAVEVRNKIVEAYQEISRMQI 95


>gi|152997452|ref|YP_001342287.1| flagellar hook-basal body complex subunit FliE [Marinomonas sp.
           MWYL1]
 gi|150838376|gb|ABR72352.1| flagellar hook-basal body complex subunit FliE [Marinomonas sp.
           MWYL1]
          Length = 120

 Score = 75.4 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 2   MIEQIQGTNSFISHTD-----------TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKG 50
           MI      N  +S               +         S          F+ +L++    
Sbjct: 1   MISGRPDINQVLSQMRDMRSQVQAPSTPVSNVAKVGGESEGGQTVERADFAEMLKNAVDN 60

Query: 51  AIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                +++  ++ +  +G     + + +  + ++  +      +R+K++ A  ++  M I
Sbjct: 61  VNALQKESTQLAQSYERGDEGVDLPQVMIGLQKSSVSFEAMTQVRNKLVDAYEKIMNMPI 120


>gi|147678425|ref|YP_001212640.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274522|dbj|BAF60271.1| flagellar hook-basal body protein [Pelotomaculum thermopropionicum
           SI]
          Length = 95

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
                    Q +  +  +   SFS +LQD  K       KA+N++   L G+   + +  
Sbjct: 4   PSVGPALLPQPAGGKQEAGGSSFSEMLQDALKKVNDAQVKADNLARQLLTGEVQDIHQVT 63

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A  T+ L++ +R+KI+ A  E+S+MQ+
Sbjct: 64  VAMQEARLTMQLAVEVRNKIIEAYQEISRMQV 95


>gi|167037670|ref|YP_001665248.1| flagellar hook-basal body protein FliE [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750739|ref|ZP_05491624.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|307264865|ref|ZP_07546427.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|320116085|ref|YP_004186244.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|326389484|ref|ZP_08211051.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166856504|gb|ABY94912.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750322|gb|EEU63341.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|306920123|gb|EFN50335.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|319929176|gb|ADV79861.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|325994489|gb|EGD52914.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 98

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
            ++    +      +     + GS   +FS  L++           A       + G+  
Sbjct: 1   MVNQITPVNPVTLDSTLEATQNGSKIDTFSDFLKEAFNKVNDLQLTAMKNDQKLVTGEID 60

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A+  L L+I +++K+L A  E+ +M +
Sbjct: 61  DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98


>gi|304312786|ref|YP_003812384.1| Flagellar hook-basal body complex protein [gamma proteobacterium
           HdN1]
 gi|301798519|emb|CBL46749.1| Flagellar hook-basal body complex protein [gamma proteobacterium
           HdN1]
          Length = 115

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNS-NEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I+Q+      +     +  + +                F  +++D         + ++ +
Sbjct: 7   IDQVLAQMRQLRQAAGMDRKAELLPPGFGASQPVDRPGFGNVMKDALTKVNELQKTSDAM 66

Query: 62  SLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               ++  G T +   +    +A      ++ +R+K++ A  E+  M +
Sbjct: 67  KTEYIRTDGATDITRVMVASQKASIAFQATVQVRNKMVEAYKEIMNMPV 115


>gi|209964220|ref|YP_002297135.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodospirillum centenum SW]
 gi|209957686|gb|ACI98322.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodospirillum centenum SW]
          Length = 102

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAE 83
              +   +       SF  LL+  A+ +I  M+  E  S+  + GK  + + V  +  AE
Sbjct: 18  QGLKPGMKTPAEEGESFGDLLRHAAEESIDTMKLGEQKSIEGIVGKADLADVVTAVSNAE 77

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            TL   + +RD++++A  E+ +M I
Sbjct: 78  VTLQAVVNVRDRVITAYQEILRMPI 102


>gi|260776485|ref|ZP_05885380.1| flagellar hook-basal body complex protein FliE [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607708|gb|EEX33973.1| flagellar hook-basal body complex protein FliE [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 103

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            + F      +      T+ +   G +    F  LL +      G  + + N+ +   +G
Sbjct: 3   IDGFQGEMQAMMFEATNTKPAAT-GHTVGADFGDLLNNAINNVNGLSKTSSNLQMRFDRG 61

Query: 69  --KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  DENVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|226941279|ref|YP_002796353.1| flagellar hook-basal body protein FliE [Laribacter hongkongensis
           HLHK9]
 gi|226716206|gb|ACO75344.1| FliE [Laribacter hongkongensis HLHK9]
          Length = 109

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEG--GSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           G +  +    T+           +     + P+ F+A+LQ            ++N+    
Sbjct: 5   GIDQLLGELRTVATLASGKPAPQQVAKDAAEPVDFAAVLQASLDKVAERQAGSQNLQQRW 64

Query: 66  LQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G    ++ + +  + +A  +    + +R+K++SA  ++   Q+
Sbjct: 65  ELGDENVNLHDVMLSLQKASLSFQTMVQVRNKLVSAYQDIMNTQV 109


>gi|295399808|ref|ZP_06809789.1| flagellar hook-basal body complex subunit FliE [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111680|ref|YP_003989996.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           Y4.1MC1]
 gi|294978211|gb|EFG53808.1| flagellar hook-basal body complex subunit FliE [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216781|gb|ADP75385.1| flagellar hook-basal body complex subunit FliE [Geobacillus sp.
           Y4.1MC1]
          Length = 99

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 26  TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAER 84
             +   +       FSA L+D          +A+ ++   ++G    + + +    +A  
Sbjct: 16  AASQTAKPADVQKEFSAFLKDALNKVNEQQIQADQLTEKLVKGENVDLHQVMIAAQKASI 75

Query: 85  TLNLSIALRDKILSAVSEVSKMQI 108
           +L L++ +R+K++ A  E+ +MQI
Sbjct: 76  SLQLTLEVRNKVIEAYQEMMRMQI 99


>gi|303240289|ref|ZP_07326808.1| flagellar hook-basal body complex subunit FliE [Acetivibrio
           cellulolyticus CD2]
 gi|302592199|gb|EFL61928.1| flagellar hook-basal body complex subunit FliE [Acetivibrio
           cellulolyticus CD2]
          Length = 102

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  I G NS  S             ++ ++  S   SF+  L+D         +++  
Sbjct: 1   MAVNSISGFNSIPS-------LSKIGLSNTDKADSVEGSFANYLKDALTNVSNLEKESTA 53

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     GKT  + + +    +A+  L  ++ +R+KI+ A  E+  MQ+
Sbjct: 54  LTEDFAAGKTDNIHQVMIAAEKADVALQFTMQIRNKIMDAYKEIMNMQV 102


>gi|149184177|ref|ZP_01862495.1| flagellar hook-basal body complex protein (FliE) [Erythrobacter sp.
           SD-21]
 gi|148831497|gb|EDL49930.1| flagellar hook-basal body complex protein (FliE) [Erythrobacter sp.
           SD-21]
          Length = 121

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
             I  +  +   ++          +   SF   L+           ++  ++ A  +G+ 
Sbjct: 23  QIIDRSQVLKEIHEPKPAEPTSSATGGPSFGESLRSALDSVNSVQAESGRMTAAYERGEE 82

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           T + + +    ++      ++ +R+K+L+A  E  +M I
Sbjct: 83  TDIAKVMLARQESGVAFEATLQVRNKLLAAYQETMRMGI 121


>gi|299068776|emb|CBJ40016.1| Flagellar hook-basal body complex protein fliE [Ralstonia
           solanacearum CMR15]
          Length = 110

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I       S ++       +      S  +     I F A+L+          +KAE 
Sbjct: 1   MDITNANSVVSLMNSVLAPSSKVGGLSGSAGDSAKVSIDFGAVLKSSLDKVDASQQKAET 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   L  ++ +R+K++SA   +  M I
Sbjct: 61  LSRSFELGNNDVDLHDVMLSLQKANIDLQTAVQVRNKMVSAYQNIMSMSI 110


>gi|207728373|ref|YP_002256767.1| flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum MolK2]
 gi|206591619|emb|CAQ57231.1| flagellar hook-basal body complex protein flie [Ralstonia
           solanacearum MolK2]
          Length = 110

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I       S ++       +      S  +     I F A+L+          +KAE 
Sbjct: 1   MDITNANSVVSLMNSVLAPSSKVGSLDGSAGDNAKVSIDFGAVLKSSLDKVDASQQKAET 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   L  +  +R+K++SA   +  M I
Sbjct: 61  LSRSFELGNNDVDLHDVMLSLQKANIDLQTAAQVRNKLVSAYQNIMSMSI 110


>gi|312621567|ref|YP_004023180.1| flagellar hook-basal body complex subunit flie
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202034|gb|ADQ45361.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 104

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G  +F S T     ++     ++    +S +SF   L    +G  G  ++A+  +   
Sbjct: 1   MVGNINFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNRLF 60

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L G  T+ ++A+    +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 61  LLGLSTNPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|323705447|ref|ZP_08117022.1| flagellar hook-basal body complex subunit FliE
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535349|gb|EGB25125.1| flagellar hook-basal body complex subunit FliE
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 95

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
            + I               S+  SF  +L+           KA+      + G    +  
Sbjct: 2   INPISQISAVGSVGTSNATSNTSSFGDILKTAISDVNNLQLKAQQDDQMLVTGDINDIHN 61

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +    +A+  L L+I +++KIL A  E+ +M +
Sbjct: 62  VMIDATKADIALELTIQIKNKILDAYQEIMRMPV 95


>gi|167040331|ref|YP_001663316.1| flagellar hook-basal body protein FliE [Thermoanaerobacter sp.
           X514]
 gi|300914415|ref|ZP_07131731.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           sp. X561]
 gi|307724349|ref|YP_003904100.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           sp. X513]
 gi|166854571|gb|ABY92980.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           sp. X514]
 gi|300889350|gb|EFK84496.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           sp. X561]
 gi|307581410|gb|ADN54809.1| flagellar hook-basal body complex subunit FliE [Thermoanaerobacter
           sp. X513]
          Length = 98

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
            ++    +      +     +  S   +FS  L++           A       + G+  
Sbjct: 1   MVNQITPVNPVTLDSTLEATQNSSKIDTFSDFLKEAFNKVNDLQLTAMKNDQKLVTGEID 60

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A+  L L+I +++K+L A  E+ +M +
Sbjct: 61  DINQVMIDAAKADIALQLTIQIKNKVLEAYQEIMRMPL 98


>gi|134300248|ref|YP_001113744.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           reducens MI-1]
 gi|134052948|gb|ABO50919.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           reducens MI-1]
          Length = 96

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
            +      ++ ++    + P  F  +L            +A++V    L G+   + +  
Sbjct: 5   PVATPLQVSETTSANKYAGPADFGGVLNKAISKLNDTQIQADDVMQKFLVGEVQDIHQVT 64

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A+ T+ L++ +R+KI+ A  E+S++Q+
Sbjct: 65  VAMQEAKLTMQLAVEVRNKIVEAYQEISRIQL 96


>gi|88813199|ref|ZP_01128439.1| flagellar biosynthesis; basal-body component [Nitrococcus mobilis
           Nb-231]
 gi|88789521|gb|EAR20648.1| flagellar biosynthesis; basal-body component [Nitrococcus mobilis
           Nb-231]
          Length = 106

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
               +    T+  +      S     S P  F+ LLQ   +      +     + A L G
Sbjct: 6   IQQALQQMQTLAAQAAGRLPSEAAVDSRPADFAGLLQSAIETVNDLQQNTGRKTDAFLNG 65

Query: 69  K-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   + E +    ++         +R+ +L+A  E+S+MQI
Sbjct: 66  EGVPLTEVMIAGQKSRVAFEAIKEVRNHLLTAYQEISRMQI 106


>gi|15895432|ref|NP_348781.1| flagellar hook-basal body protein FliE [Clostridium acetobutylicum
           ATCC 824]
 gi|38503143|sp|Q97H50|FLIE_CLOAB RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|15025156|gb|AAK80121.1|AE007716_10 Flagellar hook-basal body protein FliE [Clostridium acetobutylicum
           ATCC 824]
 gi|325509578|gb|ADZ21214.1| flagellar hook-basal body protein FliE [Clostridium acetobutylicum
           EA 2018]
          Length = 111

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
              S ++   +     +  Q S +  G++ + F  +L +  +        A+N + A +Q
Sbjct: 10  SMKSILTKNTSNTNVINENQTSGDANGTNSVDFGNILNEKLQEVNDKQIDADNTTNAFIQ 69

Query: 68  GK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    + + +    +A+ +L L++ +R+K++ A  E+++ Q+
Sbjct: 70  GDDVDVHKVMLSTEEAKLSLELAVQMRNKLVDAYQELNRTQL 111


>gi|224370788|ref|YP_002604952.1| FliE [Desulfobacterium autotrophicum HRM2]
 gi|223693505|gb|ACN16788.1| FliE [Desulfobacterium autotrophicum HRM2]
          Length = 96

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 37/96 (38%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           ++    +       +  N +      SF   L    K         ++ +   + G+  +
Sbjct: 1   MNPLSGVDKISLVREPLNLKLTRQDPSFLDRLNAAVKDVNSKQNLGDDAAEKVVTGELGI 60

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            E +  + +A+ +L L + +R K++ A   +  MQI
Sbjct: 61  HEGMLALGEADTSLRLMVQVRSKVMEAYKTIINMQI 96


>gi|222530140|ref|YP_002574022.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456987|gb|ACM61249.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 104

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G  +F S T     ++     ++    +S +SF   L    +G  G  ++A+  +   
Sbjct: 1   MVGNINFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLF 60

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L G  T+ ++A+    +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 61  LLGLSTNPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|197120200|ref|YP_002140627.1| flagellar hook-basal body complex protein FliE [Geobacter
           bemidjiensis Bem]
 gi|197089560|gb|ACH40831.1| flagellar hook-basal body complex protein FliE [Geobacter
           bemidjiensis Bem]
          Length = 104

 Score = 73.5 bits (179), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I  +   +       +          +     +  +SF   L DM        + A+ 
Sbjct: 1   MEISALTKVSGL-----SEAFPAAGATGAAGVQQNPTVSFGNFLDDMVGKVGELQKTADQ 55

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                  G++  + E +  + +A  +  +   +R+K + A  E+ +M +
Sbjct: 56  SIQGLATGESKGLHEVMLAVEKASISFQMLTQVRNKAVEAYQEIMRMPV 104


>gi|188997544|ref|YP_001931795.1| flagellar hook-basal body complex subunit FliE
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932611|gb|ACD67241.1| flagellar hook-basal body complex subunit FliE
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 94

 Score = 73.5 bits (179), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
               G+     +   E+   S  SFS LLQ+  K    D+  A+N+      GK  ++++
Sbjct: 1   MRIEGLNGLLLKLDVEKKEESNTSFSDLLQNFIKDVNNDLINAKNIEQDLSLGKIQNIQD 60

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A+  I +A+ +  L   +R+K L +  E+ +MQ+
Sbjct: 61  AMYQIEKADISFRLLTEIRNKALESYQEIMRMQV 94


>gi|258592506|emb|CBE68815.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 100

 Score = 73.5 bits (179), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
           +     ++ + G S   SF+ LL++          +A+ ++    +G++  +   +  I 
Sbjct: 13  QGLSVPSATKTGVSGEGSFAGLLREAVSQTDRLQHEADALAEQVAKGQSGDLAATMIAIE 72

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A+ +  L + +R+K++ A  E+ +M +
Sbjct: 73  KAQISFQLMLQVRNKVVEAYQEIMRMPV 100


>gi|91202524|emb|CAJ72163.1| similar to flagellar hook-basal body complex protein FliE
           [Candidatus Kuenenia stuttgartiensis]
          Length = 99

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 34  GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIAL 92
                SF   L            KA +       GK  ++ E +  + +AE +    +  
Sbjct: 24  EQKGASFKDTLGGFINEINDLQVKASDSIEKFSGGKIENIHEVMVAMSKAEVSFKFMMET 83

Query: 93  RDKILSAVSEVSKMQI 108
           R+K++    EV +MQ+
Sbjct: 84  RNKLVETYKEVMRMQM 99


>gi|259907605|ref|YP_002647961.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           Ep1/96]
 gi|224963227|emb|CAX54711.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           Ep1/96]
 gi|283477447|emb|CAY73363.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           DSM 12163]
 gi|310764889|gb|ADP09839.1| Flagellar hook-basal body complex protein FliE [Erwinia sp. Ejp617]
          Length = 110

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 3/109 (2%)

Query: 2   MIEQIQG-TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M   I        S    I    +F  N          +FS  L +         + A+ 
Sbjct: 1   MSSSIHNVIGQMHSQAQKISAPDEFLSNGKLTSLGGGPNFSDALFNSINEINKSQQTAKA 60

Query: 61  VSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            + + + G +   + + +  + ++    +  + LR+K+LSA  EV  M 
Sbjct: 61  QTQSWMSGSSDIGLNDVMLSLQKSSVAFSFGVQLRNKMLSAYQEVMNMP 109


>gi|189426354|ref|YP_001953531.1| flagellar hook-basal body complex subunit FliE [Geobacter lovleyi
           SZ]
 gi|254789310|sp|B3EBH2|FLIE_GEOLS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|189422613|gb|ACD97011.1| flagellar hook-basal body complex subunit FliE [Geobacter lovleyi
           SZ]
          Length = 99

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 36/97 (37%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I+    +GM   F    N    S         +++        ++++        G+  +
Sbjct: 3   INGISGVGMSTAFPLEKNTSSTSVADGAGKFFKELVGKVNDLSQQSDQAIQKLATGENRN 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + E +  + +A  +      +R+K L A  EV +M +
Sbjct: 63  LHETMIAVEKASVSFLFMSQVRNKALEAYQEVMRMPV 99


>gi|28899024|ref|NP_798629.1| flagellar hook-basal body protein FliE [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153836964|ref|ZP_01989631.1| flagellar hook-basal body complex protein (FliE) [Vibrio
           parahaemolyticus AQ3810]
 gi|260365230|ref|ZP_05777787.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus K5030]
 gi|260878780|ref|ZP_05891135.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AN-5034]
 gi|260897375|ref|ZP_05905871.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus Peru-466]
 gi|260899934|ref|ZP_05908329.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AQ4037]
 gi|7327275|gb|AAF59654.1| FliE [Vibrio parahaemolyticus]
 gi|28807243|dbj|BAC60513.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149749737|gb|EDM60482.1| flagellar hook-basal body complex protein (FliE) [Vibrio
           parahaemolyticus AQ3810]
 gi|308088271|gb|EFO37966.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus Peru-466]
 gi|308094302|gb|EFO43997.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AN-5034]
 gi|308107293|gb|EFO44833.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AQ4037]
 gi|308115389|gb|EFO52929.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus K5030]
 gi|328474439|gb|EGF45244.1| flagellar hook-basal body protein FliE [Vibrio parahaemolyticus
           10329]
          Length = 103

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +       M           G      F+ LL           + + ++  
Sbjct: 1   MKVDGIQAEMRAM----MVEATNTTPTGTGAKVGADFNDLLTKAINNVNSLQKSSGDLQT 56

Query: 64  AALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +G     + + +    ++      ++ +R+K++ A  ++  M +
Sbjct: 57  RFDRGDADVSLSDVMIARNKSSVAFEATVQIRNKLVEAYKDLMNMPV 103


>gi|253702509|ref|YP_003023698.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M21]
 gi|251777359|gb|ACT19940.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M21]
          Length = 104

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I  +   +       +          +     +  +SF   L +M        + A+ 
Sbjct: 1   MEISALTKVSGL-----SEAFPAAGATGAAGVQQNPTVSFGNFLDEMVGKVGELQKTADQ 55

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                  G++  + E +  + +A  +  +   +R+K + A  E+ +M +
Sbjct: 56  SIQGLATGESKGLHEVMLAVEKASISFQMLTQVRNKAVEAYQEIMRMPV 104


>gi|182412249|ref|YP_001817315.1| flagellar hook-basal body complex subunit FliE [Opitutus terrae
           PB90-1]
 gi|177839463|gb|ACB73715.1| flagellar hook-basal body complex subunit FliE [Opitutus terrae
           PB90-1]
          Length = 110

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           I    S +       +       S     +    F  LL  +    +     A+  +   
Sbjct: 7   ISPLQSGLLTRIDAPLPKTALTPSGPLTATPTQGFGQLLDGVVGTVVEKQTIAQEATRKV 66

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L G++  + ++V  + +A    ++ + +R+K++ +  E+ +MQ+
Sbjct: 67  LLGESDQLHQSVIAMQEASVAFSMMVEVRNKLVESYQELMRMQV 110


>gi|291613069|ref|YP_003523226.1| flagellar hook-basal body complex subunit FliE [Sideroxydans
           lithotrophicus ES-1]
 gi|291583181|gb|ADE10839.1| flagellar hook-basal body complex subunit FliE [Sideroxydans
           lithotrophicus ES-1]
          Length = 108

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +   +S +S      M     Q +     +  + F+ +L+    G      +AE++
Sbjct: 1   MSMDVSNVDSLLSQMRAA-MAAAQGQPARAPAQTGGVDFADVLKSSLDGVNQAQHQAEDL 59

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             A + G    S+ + +  + +A  +   ++ +R+K+++A +++  MQ+
Sbjct: 60  QKAFVLGDDKVSLSDTMIAMQKANISFQTAVQVRNKVVAAYNDIMNMQV 108


>gi|187934886|ref|YP_001885040.1| flagellar hook-basal body complex protein [Clostridium botulinum B
           str. Eklund 17B]
 gi|187723039|gb|ACD24260.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum B str. Eklund 17B]
          Length = 108

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLS 89
                  +SF   L++          +A+  + A ++G   ++ E +    +A   L   
Sbjct: 30  TSDKEDSVSFGETLKNCIDDVNTKQVQADTYTNAFVKGDDVNIDEVMIKGEEASLALQFL 89

Query: 90  IALRDKILSAVSEVSKMQI 108
           +  RD ++ +  E+ KMQ+
Sbjct: 90  VKTRDNLVESYKELIKMQL 108


>gi|312126818|ref|YP_003991692.1| flagellar hook-basal body complex subunit flie
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311776837|gb|ADQ06323.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 104

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G  +F S T     ++     ++    +S +SF   L    +G  G  ++A+  +   
Sbjct: 1   MVGNINFDSITKAFEKQFSSINTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLF 60

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L G   + ++A+    +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 61  LLGLSANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|212639568|ref|YP_002316088.1| flagellar hook-basal body protein FliE [Anoxybacillus flavithermus
           WK1]
 gi|212561048|gb|ACJ34103.1| Flagellar hook-basal body protein FliE [Anoxybacillus flavithermus
           WK1]
          Length = 97

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 2/98 (2%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            I     I +     Q    +   +  +FS  L++          +++ ++    +G   
Sbjct: 1   MIDRIQRISLSPTV-QQQAIKPAEAQRAFSQFLKEAINEVNKQQIESDQLTTKLAKGENV 59

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +   +    +A  +L L+I +R+K++ A  EV +MQ+
Sbjct: 60  DLHNVMIASQKASVSLQLAIEVRNKVIEAYQEVMRMQV 97


>gi|322421736|ref|YP_004200959.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M18]
 gi|320128123|gb|ADW15683.1| flagellar hook-basal body complex subunit FliE [Geobacter sp. M18]
          Length = 101

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
            +    Q +    G+  + F   L++M          A+    A   G++  + E +  +
Sbjct: 13  SQAFPVQEAQGTQGNPAVGFGKFLEEMVSKVNEQQVTADKSIQALATGESKGLHEVMLAV 72

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  +  +   +R+K + A  E+ +M +
Sbjct: 73  EKASVSFQMLTQVRNKAVEAYQEIMRMPV 101


>gi|54294648|ref|YP_127063.1| flagellar hook-basal body complex protein [Legionella pneumophila
           str. Lens]
 gi|53754480|emb|CAH15964.1| Flagellar hook-basal body complex protein [Legionella pneumophila
           str. Lens]
          Length = 104

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 41/103 (39%), Gaps = 5/103 (4%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
            T + I+   T+  + +  +  +    +   SFS++ Q          + A+++      
Sbjct: 5   NTVNLINQMKTLAAQAEGIKPDSGLNHT---SFSSVFQQALNQVNELSQTADSLKTRFEI 61

Query: 68  G--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    S+ E +    ++      ++ +R+K + A  ++  M +
Sbjct: 62  GDPNVSLGEVMIASQKSNLGFEATLRVRNKFVQAYQDIMNMPV 104


>gi|124516312|gb|EAY57820.1| Flagellar hook-basal body complex protein FliE [Leptospirillum
           rubarum]
          Length = 109

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+      S +   +      + T      G S   SF  +L+D  +        A+  
Sbjct: 1   MIDDSLHARSILPAGELSPAERNDTPGKTTGGESGEASFLHVLKDSMEKVNQMQNAADKT 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 G+   ++ + +  + QA+ +  L + +RD+I+ A  +V  M +
Sbjct: 61  IQDFSTGQDGVTLHQTMVAMAQADVSFQLMMQVRDRIVRAYQDVMNMPM 109


>gi|302389657|ref|YP_003825478.1| flagellar hook-basal body complex subunit FliE
           [Thermosediminibacter oceani DSM 16646]
 gi|302200285|gb|ADL07855.1| flagellar hook-basal body complex subunit FliE
           [Thermosediminibacter oceani DSM 16646]
          Length = 94

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNL 88
                 +  SF+ +L    +   G  +  ++     + G   S+ E +    +A+ +L L
Sbjct: 15  GASKKQADNSFNDILAKAFETVNGYQKGYDDALKKLIAGEDISVHEVMIAAEKAKLSLEL 74

Query: 89  SIALRDKILSAVSEVSKMQI 108
           ++ +R+K + A  E+ +MQI
Sbjct: 75  AVQVRNKAIEAYQEIMRMQI 94


>gi|126653750|ref|ZP_01725668.1| flagellar hook-basal body protein [Bacillus sp. B14905]
 gi|169827119|ref|YP_001697277.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|126589714|gb|EAZ83850.1| flagellar hook-basal body protein [Bacillus sp. B14905]
 gi|168991607|gb|ACA39147.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 93

 Score = 72.7 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDH 78
               + T   N     +  SF+  L++           ++N +   ++G    + E +  
Sbjct: 4   TQVVNETNKLNTTPYEAQQSFANSLKEAIAKVNDQQITSDNFTQKLIKGENVELHEVMIA 63

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A  TLN +I +R+K++ A  E+ +M +
Sbjct: 64  SQKASITLNATIEVRNKVIEAYQEIMRMSV 93


>gi|52841988|ref|YP_095787.1| flagellar hook-basal body protein FliE [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148359305|ref|YP_001250512.1| flagellar hook-basal body protein FliE [Legionella pneumophila str.
           Corby]
 gi|296107352|ref|YP_003619052.1| flagellar hook-basal body complex protein FliE [Legionella
           pneumophila 2300/99 Alcoy]
 gi|52629099|gb|AAU27840.1| flagellar hook-basal body protein FliE [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281078|gb|ABQ55166.1| flagellar hook-basal body protein FliE [Legionella pneumophila str.
           Corby]
 gi|295649253|gb|ADG25100.1| flagellar hook-basal body complex protein FliE [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610460|emb|CBX00031.1| flagellar hook-basal body complex protein [Legionella pneumophila
           130b]
          Length = 104

 Score = 72.7 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 42/103 (40%), Gaps = 5/103 (4%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
            T + I+   T+  + +  +  +    +   SFS++ Q          + A+++      
Sbjct: 5   NTVNLINQMKTLAAQAEGIKPDSGLNHA---SFSSVFQQALNQVNELSQTADSLKTRFEI 61

Query: 68  G--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    S+ E +    ++      ++ +R+K++ A  ++  M +
Sbjct: 62  GDPNVSLGEVMIASQKSNLGFEATLRVRNKLVQAYQDIMNMPV 104


>gi|91223543|ref|ZP_01258808.1| flagellar hook-basal body protein FliE [Vibrio alginolyticus 12G01]
 gi|91191629|gb|EAS77893.1| flagellar hook-basal body protein FliE [Vibrio alginolyticus 12G01]
          Length = 128

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + +I G  + +       M           G      F+ LL           + + ++ 
Sbjct: 25  LMKIDGIQAEMRAM----MVEATNTAPTASGAKVGADFNDLLTKAINNVNTLQKASGDLQ 80

Query: 63  LAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               +G     + + +    ++    + ++ +R+K++ A  ++  M +
Sbjct: 81  TRFDRGDADVSLSDVMIARNKSSVAFDATVQIRNKLVEAYKDLMNMPV 128


>gi|292489163|ref|YP_003532050.1| flagellar hook-basal body complex protein FliE [Erwinia amylovora
           CFBP1430]
 gi|292900281|ref|YP_003539650.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
           49946]
 gi|291200129|emb|CBJ47255.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
           49946]
 gi|291554597|emb|CBA22240.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
           CFBP1430]
 gi|312173322|emb|CBX81577.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
           ATCC BAA-2158]
          Length = 110

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 2/101 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
                S    I    +F  N       S  +FS  L +         + A+  S + + G
Sbjct: 9   IGQMHSQAQKISAPDEFLSNGKLTSLGSGPNFSDALFNSINEINKSQQTAKAQSQSWMSG 68

Query: 69  KTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            +   + + +  + ++    +  + LR+K+LSA  EV  M 
Sbjct: 69  NSDIGLNDVMLSLQKSSVAFSFGVQLRNKMLSAYQEVMNMP 109


>gi|302874588|ref|YP_003843221.1| flagellar hook-basal body complex subunit FliE [Clostridium
           cellulovorans 743B]
 gi|307690801|ref|ZP_07633247.1| flagellar hook-basal body protein FliE [Clostridium cellulovorans
           743B]
 gi|302577445|gb|ADL51457.1| flagellar hook-basal body complex subunit FliE [Clostridium
           cellulovorans 743B]
          Length = 105

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G  + ++  + I      T  +  +     + F ++L+D           A NV  + 
Sbjct: 3   VNGIGNGLTGINDISKLISNTNTN-NKSNDDTVDFLSVLEDKLGDVNSKQVDAYNVQQSF 61

Query: 66  LQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + G  T + + +  + +A+ +L+L++ +R+K+L A  E+S++Q+
Sbjct: 62  IAGDETDIHKVMISMEEAKISLDLAVQVRNKLLEAYQEISRIQL 105


>gi|149908458|ref|ZP_01897121.1| Flagellar hook-basal body protein [Moritella sp. PE36]
 gi|149808621|gb|EDM68556.1| Flagellar hook-basal body protein [Moritella sp. PE36]
          Length = 109

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 41/109 (37%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M        S +        +++    + +   ++  SF  +LQ       G  +   ++
Sbjct: 1   MNIAANNLYSEMQSMSLQATKFEADPTALKAPTTTSASFGDMLQQAIDNVNGLQQNTGDL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                QG    S+ + +    ++    + ++ +R+K++ +  E+  M +
Sbjct: 61  RTRFDQGDRSVSLSDVMIASQKSGIAFDATVQVRNKLIESYKEIMSMPV 109


>gi|297617137|ref|YP_003702296.1| flagellar hook-basal body complex subunit FliE [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144974|gb|ADI01731.1| flagellar hook-basal body complex subunit FliE [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 105

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQA 82
             +   +     +  SFS+ L+          E+A   +L    G +  + + +    +A
Sbjct: 20  AKSGQDSASAADNSKSFSSYLKAALNEVNQLQEEAGQSALNLATGGEADVHQTMIAYEKA 79

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
              L L+I +R+K++ A  E+ +MQ+
Sbjct: 80  ALALQLTIEVRNKLIEAYQEIMRMQM 105


>gi|323703168|ref|ZP_08114821.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531827|gb|EGB21713.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           nigrificans DSM 574]
          Length = 96

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
            + M     + +++        F+ LL +          KA+ V    L G    + +  
Sbjct: 5   PVAMPMQIPETNSKAQTDGGTGFAELLNNAINKLNDSQLKADEVMQKFLVGDVQDIHQVT 64

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A+ T+ L++ +R+KI+ A  E+S+MQ+
Sbjct: 65  IAMQEAKLTMQLAVEVRNKIVEAYQEISRMQL 96


>gi|325295412|ref|YP_004281926.1| Flagellar hook-basal body complex protein fliE [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065860|gb|ADY73867.1| Flagellar hook-basal body complex protein fliE [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 95

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
                F  LL++  K    D++++       + G   ++ E +  I +A+ +L L + +R
Sbjct: 21  QKANGFKDLLENFIKDVNSDLKESRKAEENLISGNVQNIEEIMYKIEKADLSLRLLVEIR 80

Query: 94  DKILSAVSEVSKMQI 108
           +K L +  E+ +MQ+
Sbjct: 81  NKALESYQEIMRMQV 95


>gi|289548425|ref|YP_003473413.1| flagellar hook-basal body complex subunit FliE [Thermocrinis albus
           DSM 14484]
 gi|289182042|gb|ADC89286.1| flagellar hook-basal body complex subunit FliE [Thermocrinis albus
           DSM 14484]
          Length = 92

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 37  PISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDK 95
              F   L+ +        ++A NV  A L+G    +   V  + +A   L+L + +R+K
Sbjct: 20  TSDFFEELKRIVLWVNQQRQEANNVREAFLKGEDVPLHRLVIEMEKASLALSLLVQIRNK 79

Query: 96  ILSAVSEVSKMQI 108
           ++ A  E+++MQ+
Sbjct: 80  LVEAFQELNRMQV 92


>gi|146296279|ref|YP_001180050.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409855|gb|ABP66859.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 102

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSI 90
           E  +S  SF   L    +G     ++A+  +     G  ++ ++A+    +A   L L++
Sbjct: 25  EKSNSSTSFIDFLYKALEGVDNLQKEADYQNQLFTLGLTSNPQDAIVASEKASMALQLTL 84

Query: 91  ALRDKILSAVSEVSKMQI 108
            +R+KIL A +E+ +MQ+
Sbjct: 85  QIRNKILDAYNEIMRMQV 102


>gi|312135855|ref|YP_004003193.1| flagellar hook-basal body complex subunit flie
           [Caldicellulosiruptor owensensis OL]
 gi|311775906|gb|ADQ05393.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor owensensis OL]
          Length = 104

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
            ++     ++    +S ISF   L    +G     ++AE  +   L G  T+ ++A+   
Sbjct: 16  KQFSSINTNSASNQTSQISFVDFLYKALEGVDSLQKEAEYQNNLFLLGLSTNPQDAIVAS 75

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 76  EKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|27365279|ref|NP_760807.1| flagellar hook-basal body protein FliE [Vibrio vulnificus CMCP6]
 gi|161486614|ref|NP_935275.2| flagellar hook-basal body protein FliE [Vibrio vulnificus YJ016]
 gi|320155663|ref|YP_004188042.1| flagellar hook-basal body complex protein FliE [Vibrio vulnificus
           MO6-24/O]
 gi|27361426|gb|AAO10334.1| flagellar hook-basal body complex protein (FliE) [Vibrio vulnificus
           CMCP6]
 gi|319930975|gb|ADV85839.1| flagellar hook-basal body complex protein FliE [Vibrio vulnificus
           MO6-24/O]
          Length = 103

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 2/92 (2%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREAV 76
             M       +   G      FS LL           + + ++     +G     + + +
Sbjct: 12  AMMLEASNTTAPATGAKVSADFSTLLNQAINNVNSLQKSSSDLQTRFDRGDADVSLSDVM 71

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               ++      ++ +R+K++ A  ++  M +
Sbjct: 72  IARNKSSVAFEATVQVRNKLVEAYKDLMNMPV 103


>gi|91785610|ref|YP_560816.1| flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
 gi|91689564|gb|ABE32764.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
          Length = 135

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   +   +S +    ++  +      +  +  G ++P  F++ L+       GD  KA 
Sbjct: 25  MTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAATPTGFASALKASLDKISGDQTKAI 84

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 85  GESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV 135


>gi|238782821|ref|ZP_04626850.1| Flagellar hook-basal body protein [Yersinia bercovieri ATCC 43970]
 gi|238716244|gb|EEQ08227.1| Flagellar hook-basal body protein [Yersinia bercovieri ATCC 43970]
          Length = 111

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFIS-HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I+ I G    I+     +         S+ +G   P+ FS +L            +A+
Sbjct: 1   MSIQSISGVLEQINFQAQQVSNTQRSPFISDRQGVEKPLQFSDILFSSVNSINEIQTQAK 60

Query: 60  NVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + S   L G T   + + +  + ++   LNL + +R+K++SA  EV  M +
Sbjct: 61  SQSQDYLTGATDIGLNDVMVSLQKSSLALNLGVQVRNKLVSAYQEVMNMSV 111


>gi|329901252|ref|ZP_08272777.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327549184|gb|EGF33776.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 114

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 9   TNSFISHTDTIGMRYDFTQN--SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
             + IS       R        + +    +   F+  L+    G     + AE +     
Sbjct: 11  IEAMISQLKAAATRPQGGVPVVAADPTAVAKTGFADALKASLDGVNASQKTAEGLGSRFA 70

Query: 67  QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G    S+ + +    +A      ++ +R+K++SA  ++  MQI
Sbjct: 71  LGDDKVSLSDVMISSQKANIGFQATVQVRNKLVSAYQDIMNMQI 114


>gi|153834139|ref|ZP_01986806.1| flagellar hook-basal body complex protein (FliE) [Vibrio harveyi
           HY01]
 gi|148869509|gb|EDL68507.1| flagellar hook-basal body complex protein (FliE) [Vibrio harveyi
           HY01]
          Length = 105

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 36/109 (33%), Gaps = 6/109 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M  ++ G  + +       M           G      F  LL           + + ++
Sbjct: 1   MTMKVDGIQAEMRAM----MVEATNTAPTATGAKVGADFGDLLTKAINNVNSLQKASGDL 56

Query: 62  SLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                +G     + + +    ++    + ++ +R+K++ +  ++  M +
Sbjct: 57  QTRFDRGDADVSLSDVMIARNKSSVAFDATVQIRNKLVESYKDLMNMPV 105


>gi|30250020|ref|NP_842090.1| flagellar hook-basal body protein FliE [Nitrosomonas europaea ATCC
           19718]
 gi|38502947|sp|Q82T49|FLIE_NITEU RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|30139127|emb|CAD85991.1| Flagellar hook-basal body complex protein FliE [Nitrosomonas
           europaea ATCC 19718]
          Length = 109

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 3/109 (2%)

Query: 3   IEQIQGTNSFISHTDTIG-MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           +    G +  ++       +    ++ S      S   F  LL+          + A  +
Sbjct: 1   MNVTSGMDQILAQLKATSDLAAGGSKPSATVSTVSQADFGQLLKSAVDQVNTVQQTASQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S   + G     + + +  + +A  +    I +R+++++A  E+  MQ+
Sbjct: 61  SREFVGGNQDVELHDVMISLQKANVSFQSMIQVRNRLVTAYQEIMNMQV 109


>gi|323496556|ref|ZP_08101610.1| flagellar hook-basal body protein FliE [Vibrio sinaloensis DSM
           21326]
 gi|323318400|gb|EGA71357.1| flagellar hook-basal body protein FliE [Vibrio sinaloensis DSM
           21326]
          Length = 103

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            + F S    +      T+ +   G +    F  LL +         + + N+ +   +G
Sbjct: 3   IDGFQSEMQAMMFEAGNTKPAAT-GQTVGADFGELLNNAINNVNSLSKASGNLQMRFDRG 61

Query: 69  --KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  DENVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|251772445|gb|EES53012.1| flagellar hook-basal body complex subunit FliE [Leptospirillum
           ferrodiazotrophum]
          Length = 103

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
              + S     S   +F  +L+D          +A+        G+   ++ + +  + Q
Sbjct: 17  SPKEESPTPSHSGEENFVNVLKDSIARVNSLQNEADKTIQDFSTGQNGVTLHQTMIEMAQ 76

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A+ + +L + +RD+I+ A  E+  M +
Sbjct: 77  ADISFHLMMQVRDRIVKAYQEMENMPL 103


>gi|188590322|ref|YP_001920201.1| flagellar hook-basal body complex protein [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500603|gb|ACD53739.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 108

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLS 89
                + +SF   L+           +A++ + A ++G   ++ E +    +A   L   
Sbjct: 30  TLNKENNVSFGETLKGCIDEINTKQVQADSYTNAFVKGDDVNIDEVMIKGEEASLALQFL 89

Query: 90  IALRDKILSAVSEVSKMQI 108
           +  RD ++ +  E+ KMQ+
Sbjct: 90  VKTRDNLVESYKELIKMQL 108


>gi|302872572|ref|YP_003841208.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302575431|gb|ADL43222.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 104

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
            ++     ++    +S ISF   L    +G     ++AE  +   L G   + ++A+   
Sbjct: 16  KQFSSINTNSASNQTSQISFVDFLYKALEGVDSLQKEAEYQNNLFLLGLSANPQDAIVAS 75

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 76  EKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|94264092|ref|ZP_01287891.1| Flagellar hook-basal body complex protein FliE [delta
           proteobacterium MLMS-1]
 gi|93455508|gb|EAT05698.1| Flagellar hook-basal body complex protein FliE [delta
           proteobacterium MLMS-1]
          Length = 101

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMRE 74
            +++                    F  +L         +  +A+ +S   + G+  ++ E
Sbjct: 8   INSVMPVAIGGSQQPVPANDVISGFGEVLGRAVDSVNQNQAEADYLSEGLVSGQHANIHE 67

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  + +A  +  L   ++ K L A  E+ +MQ+
Sbjct: 68  TMIAVEKANISFKLMSKVQQKGLDAYQEIMRMQL 101


>gi|225849148|ref|YP_002729312.1| flagellar hook-basal body complex protein FliE
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644347|gb|ACN99397.1| flagellar hook-basal body complex protein FliE
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 96

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNL 88
            +       SF+ +L++  +    D+  A+ V      GK  +++EA+  I +A+ +  L
Sbjct: 17  TQINSQEKQSFADILKNFIQDVNNDLLTAKQVGQDLAVGKVENIQEAMYLIEKADISFKL 76

Query: 89  SIALRDKILSAVSEVSKMQI 108
              +R+K L A  E+ +MQ+
Sbjct: 77  LTEIRNKALEAYQEIMRMQV 96


>gi|311695218|gb|ADP98091.1| flagellar hook-basal body complex protein FliE [marine bacterium
           HP15]
          Length = 122

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 35/112 (31%), Gaps = 6/112 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDF----TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           +  I+   S +     +                +      SF+ +L +         + A
Sbjct: 11  LSDIRSLRSQMMQNQRVEQDQSVRGRIDGPRQVQETQETPSFNDMLSNAVNNVNDLQKTA 70

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++  A   G     +   +    ++  +      +R++++ A  ++  M I
Sbjct: 71  GDLRTAYDMGDPNVDITRVMIAAQKSSVSFEALTQVRNRVVRAYEDIMNMPI 122


>gi|76809519|ref|YP_331832.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 1710b]
 gi|76578972|gb|ABA48447.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 1710b]
          Length = 175

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSAL----LQDMAKGAIGDMEK 57
           M+  + G  S +     +  +     +       S  + +      ++       GD +K
Sbjct: 63  MVAPVNGIASALQQMQAMAAQAAGGASPATSLAGSGAASAGSFASAMKASLDKISGDQQK 122

Query: 58  AENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 123 ALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 175


>gi|251797446|ref|YP_003012177.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
           JDR-2]
 gi|247545072|gb|ACT02091.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
           JDR-2]
          Length = 103

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
            ++    +    +  +   +   +    SF   L+          ++   ++   L G+ 
Sbjct: 6   QLNPAQAVNKLLETAKPQQQATPAESMNSFGQYLESALNSVDAQEKEVHKLNDKYLIGEV 65

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +AE +L L+  +R+K + A  E+ +M +
Sbjct: 66  DVSQVLIATQKAELSLQLTTQIRNKAIDAYQEIMRMSV 103


>gi|312876495|ref|ZP_07736478.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796706|gb|EFR13052.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 104

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G  +F S +     ++     ++    SS +SF   L    +G  G  ++A+  +   
Sbjct: 1   MVGNVNFDSISKAFEKQFSSMNTNSASTQSSQVSFVDFLYKALEGVNGLQKEADYQNNLF 60

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L G   + ++A+    +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 61  LLGLSANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|297584034|ref|YP_003699814.1| flagellar hook-basal body complex subunit FliE [Bacillus
           selenitireducens MLS10]
 gi|297142491|gb|ADH99248.1| flagellar hook-basal body complex subunit FliE [Bacillus
           selenitireducens MLS10]
          Length = 95

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVD 77
           +G      QN       +  SF   L D           +++++    +G    + + + 
Sbjct: 5   MGPANQVQQNRQVTPHEAQQSFKTWLGDAINDMNQRQVDSQHMTERMARGENVDLHDVMI 64

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +A  TL  ++ +RDK++ A  E+ +MQ+
Sbjct: 65  TAQKASITLETTVEVRDKVIEAYQEIMRMQV 95


>gi|302878300|ref|YP_003846864.1| flagellar hook-basal body complex subunit FliE [Gallionella
           capsiferriformans ES-2]
 gi|302581089|gb|ADL55100.1| flagellar hook-basal body complex subunit FliE [Gallionella
           capsiferriformans ES-2]
          Length = 107

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  I      +++           +++     S  + FS++L++   G     EK+E + 
Sbjct: 1   MSNISAVEGLLANMRVAAAAAGLRESAPAA-SSGKVDFSSVLKNALDGVAQSHEKSEALQ 59

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A + G    S+ + +  + ++      +I +R+K++ A +++  MQ+
Sbjct: 60  KAFVMGDDKVSLSDTMIAMQKSGINFQATIQVRNKVILAYNDIMNMQV 107


>gi|88800452|ref|ZP_01116016.1| flagellar hook-basal body complex protein (FliE) [Reinekea sp.
           MED297]
 gi|88776782|gb|EAR07993.1| flagellar hook-basal body complex protein (FliE) [Reinekea sp.
           MED297]
          Length = 143

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 34/108 (31%), Gaps = 6/108 (5%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSP----ISFSALLQDMAKGAIGDMEKAENVS 62
                      +           + +  ++P     SF  + +        +   A+ ++
Sbjct: 36  NTVEQMRKQIQSASESQAAPDAISGDQAATPVGDVPSFGDMFKSAVDTVNDNQAAAKEIA 95

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G     + E +  + ++  +      +R+K++ A  E+  M +
Sbjct: 96  TRYEMGDPKVDLPEVMIALQKSSVSFQAMTQVRNKMIEAYKEIINMPL 143


>gi|251781161|ref|ZP_04824081.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085476|gb|EES51366.1| flagellar hook-basal body complex protein FliE [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 108

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLS 89
                + ISF   L+           +A++ + A ++G   ++ E +    +A   L   
Sbjct: 30  TLNKENNISFGETLKGCIDEINTKQVQADSYTNAFVKGDDVNIDEVMIKGEEASLALQFL 89

Query: 90  IALRDKILSAVSEVSKMQI 108
           +  RD ++ +  E+ KMQ+
Sbjct: 90  VKTRDNLVESYKELIKMQL 108


>gi|312884913|ref|ZP_07744603.1| flagellar hook-basal body protein FliE [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367390|gb|EFP94952.1| flagellar hook-basal body protein FliE [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 103

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 40/102 (39%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            + F S    +      T+ +   G +    F+ LL+          + + ++ +   +G
Sbjct: 3   IDGFQSEMQAMMFEASSTRPTAT-GETVGADFNKLLKKAINNVNSLSQTSSDLQMRFDRG 61

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  DKDVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|54297674|ref|YP_124043.1| flagellar hook-basal body complex protein [Legionella pneumophila
           str. Paris]
 gi|53751459|emb|CAH12877.1| Flagellar hook-basal body complex protein [Legionella pneumophila
           str. Paris]
          Length = 104

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 40/100 (40%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-- 68
           + ++  + +       +    + G +  SFS++ Q          + A+++      G  
Sbjct: 5   NTVNLINQMKTLAAQAEGIKLDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDP 64

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +    ++      ++ +R+K++ A  ++  M +
Sbjct: 65  NVSLGEVMIASQKSNLGFEATLRVRNKLVQAYQDIMNMPV 104


>gi|94263244|ref|ZP_01287061.1| Flagellar hook-basal body complex protein FliE [delta
           proteobacterium MLMS-1]
 gi|93456462|gb|EAT06582.1| Flagellar hook-basal body complex protein FliE [delta
           proteobacterium MLMS-1]
          Length = 101

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMRE 74
            +++                    F  +L         +  +A+ +S   + G+  ++ E
Sbjct: 8   INSVMPVAIGGSQQPVRTNDVISGFGEVLGRAVDSVNQNQAEADYLSEGLVSGQHANIHE 67

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  + +A  +  L   ++ K L A  E+ +MQ+
Sbjct: 68  TMIAVEKANISFKLMSKVQQKGLDAYQEIMRMQL 101


>gi|187926909|ref|YP_001893254.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12J]
 gi|241665238|ref|YP_002983597.1| flagellar hook-basal body protein FliE [Ralstonia pickettii 12D]
 gi|187728663|gb|ACD29827.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12J]
 gi|240867265|gb|ACS64925.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12D]
          Length = 108

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 42/110 (38%), Gaps = 4/110 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +       S ++    +         ++ E G   + F ++L+          +KAE 
Sbjct: 1   MDLSNAHSVVSLMNSV--LAPSTVGGSTASGETGKPSVDFGSVLKSSLDRVDASQQKAEA 58

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +         + + +  + +A      ++ +R+K++SA   +  M +
Sbjct: 59  ISRSFEMSNNDVDLHDVMLSLQKANIDFQTAVQVRNKLVSAYQSIMSMSV 108


>gi|77918797|ref|YP_356612.1| flagellar hook-basal body complex protein FliE [Pelobacter
           carbinolicus DSM 2380]
 gi|77544880|gb|ABA88442.1| flagellar hook-basal body complex protein FliE [Pelobacter
           carbinolicus DSM 2380]
          Length = 99

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 6/104 (5%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           ++   +      T        Q           SF  LL +          +A+      
Sbjct: 1   MKNIGAISQPLQTAIKAGGEAQTKKT-----GNSFGDLLAEAIDEVGKTQAQADQAIEKL 55

Query: 66  LQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G++ ++ E +  + +A  ++ L + +R+K++ A  E+ +MQI
Sbjct: 56  QTGESRNIHEVMIAMEKAGISMRLMVQMRNKVVEAYQEIMRMQI 99


>gi|114330761|ref|YP_746983.1| flagellar hook-basal body protein FliE [Nitrosomonas eutropha C91]
 gi|122314295|sp|Q0AI14|FLIE_NITEC RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|114307775|gb|ABI59018.1| flagellar hook-basal body complex subunit FliE [Nitrosomonas
           eutropha C91]
          Length = 109

 Score = 70.8 bits (172), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 42/109 (38%), Gaps = 3/109 (2%)

Query: 3   IEQIQGTNSFISHTDTIG-MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           +    G N  ++       +     + +     +S   F  LL+          + A  +
Sbjct: 1   MNIASGMNQMLAQLKATSDLAAGGNKPAAVAPAASQADFGQLLKSAVDQVNTVQQTANQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S   ++G     + + +  + +A  +    I +R+++++A  E+  MQ+
Sbjct: 61  SQEFVRGNQDVELHDVMISLQKANVSFQSMIQVRNRLVTAYQEIMNMQV 109


>gi|15606426|ref|NP_213806.1| flagellar hook-basal body protein [Aquifex aeolicus VF5]
 gi|6225354|sp|O67242|FLIE_AQUAE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|2983640|gb|AAC07208.1| flagellar hook-basal body protein [Aquifex aeolicus VF5]
          Length = 93

 Score = 70.8 bits (172), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSI 90
           +             +  +       K++ +  A L+G    + E V    +A+  LNL I
Sbjct: 16  QQNVKGEDIVENFVNFVEWVNEKQLKSKKLKEAVLEGRDVPLHEIVIEAEKAKVALNLLI 75

Query: 91  ALRDKILSAVSEVSKMQI 108
            +R+K+L A +E+ KMQ+
Sbjct: 76  EVRNKLLEAYNELMKMQV 93


>gi|291288217|ref|YP_003505033.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290885377|gb|ADD69077.1| flagellar hook-basal body complex subunit FliE [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 101

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
           D T++S  E   + + FS++L+D  +   G   +A++     L G+T  +   +  + +A
Sbjct: 16  DTTKSSQAEKPEASVDFSSMLKDALRDVNGAQIEADDAVQKVLSGETKDIESTMIALQKA 75

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + +L + + +R+KI+ A  EV + QI
Sbjct: 76  DVSLKMMLEVRNKIMEAYQEVMRTQI 101


>gi|331005203|ref|ZP_08328597.1| Flagellar hook-basal body complex protein FliE [gamma
           proteobacterium IMCC1989]
 gi|330420985|gb|EGG95257.1| Flagellar hook-basal body complex protein FliE [gamma
           proteobacterium IMCC1989]
          Length = 131

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--T 70
               +         Q+  +        F  ++           + +  ++ A  +G+   
Sbjct: 34  SPQVERAANPLQSLQDGIKPTSEPSAGFGQIMSQAVNHVDQLHKTSSQLATAYEKGQSGV 93

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A  +    + +R+K++ A  +V  M +
Sbjct: 94  DITDVMIASQKAGVSFQAMLQVRNKMVEAYRDVMNMPV 131


>gi|289208336|ref|YP_003460402.1| flagellar hook-basal body complex subunit FliE [Thioalkalivibrio
           sp. K90mix]
 gi|288943967|gb|ADC71666.1| flagellar hook-basal body complex subunit FliE [Thioalkalivibrio
           sp. K90mix]
          Length = 109

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 3/110 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M   QIQ   + +               + + G      F  +L+D  +G     + A +
Sbjct: 1   MSEMQIQNVLAQMRQLTQSSGVEGT-NPAQQPGKVGGAEFQNVLRDSLRGVNDVQQSATD 59

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +      G    S+ + +  + ++      +  +R+++L+A  E+ +MQ+
Sbjct: 60  LQTRFELGDENVSLPQVMVAMNKSSIAFEATNQVRNRLLNAYQEIMRMQV 109


>gi|332981430|ref|YP_004462871.1| flagellar hook-basal body complex subunit FliE [Mahella
           australiensis 50-1 BON]
 gi|332699108|gb|AEE96049.1| flagellar hook-basal body complex subunit FliE [Mahella
           australiensis 50-1 BON]
          Length = 99

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           ++             +      +  + F  LL +        ++ +     A   G    
Sbjct: 3   VNPISINAAIGTGNISPIGSAKAGEVDFKDLLSESMDKLNSIIQDSNAAGEALATGSIDD 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A+    +A+  L  +I +R+KI+ A +E+  MQI
Sbjct: 63  IHSAMIAAEKADLALQFTIQIRNKIIDAYNEIMHMQI 99


>gi|288553066|ref|YP_003425001.1| flagellar hook-basal body protein FliE [Bacillus pseudofirmus OF4]
 gi|288544226|gb|ADC48109.1| flagellar hook-basal body protein FliE [Bacillus pseudofirmus OF4]
          Length = 102

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIM 80
           +        +    +  +F A L +  +        +   +    +G+   + + +    
Sbjct: 15  QLGVQNQPLKTPAEAGETFKAALTEAVQEVNELQNVSAMKTEQLARGEIDNLHDVMITGQ 74

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A   L  ++ +R+K++ +  E+ +MQ+
Sbjct: 75  KASVALQATVEIRNKVIESYQEIMRMQV 102


>gi|163801844|ref|ZP_02195741.1| flagellar hook-basal body protein FliE [Vibrio sp. AND4]
 gi|159174352|gb|EDP59156.1| flagellar hook-basal body protein FliE [Vibrio sp. AND4]
          Length = 103

 Score = 70.8 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 31/98 (31%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           I       M           G      F  LL           + + ++     +G    
Sbjct: 6   IQSEMRAMMVEATNTAPIATGAKVGADFGDLLTKAINNVNSLQKASGDLQTRFDRGDADV 65

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    ++    + ++ +R+K++ +  ++  M +
Sbjct: 66  SLSDVMIARNKSSVAFDATVQIRNKLVESYKDLMNMPV 103


>gi|206603155|gb|EDZ39635.1| Flagellar hook-basal body complex protein FliE [Leptospirillum sp.
           Group II '5-way CG']
          Length = 109

 Score = 70.4 bits (171), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+      S +   +      + T      G S   SF  +L+D  +        A+  
Sbjct: 1   MIDDSLHARSILPAGELSPAEKNDTTGKQVGGESGEASFLHVLKDSMEKVNQMQNAADKT 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 G+   ++ + +  + QA+ +  L + +RD+I+ A  +V  M +
Sbjct: 61  IQDFSTGQDGVTLHQTMVAMAQADVSFQLMMQVRDRIVRAYQDVMNMPM 109


>gi|156975432|ref|YP_001446339.1| flagellar hook-basal body protein FliE [Vibrio harveyi ATCC
           BAA-1116]
 gi|156527026|gb|ABU72112.1| hypothetical protein VIBHAR_03163 [Vibrio harveyi ATCC BAA-1116]
          Length = 103

 Score = 70.4 bits (171), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +       M           G      F  LL           + + ++  
Sbjct: 1   MKVDGIQAEMRAM----MVEATNTAPTATGAKVGADFGDLLTKAINNVNSLQKASGDLQT 56

Query: 64  AALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +G     + + +    ++    + ++ +R+K++ +  ++  M +
Sbjct: 57  RFDRGDADVSLSDVMIARNKSSVAFDATVQIRNKLVESYKDLMNMPV 103


>gi|326796471|ref|YP_004314291.1| flagellar hook-basal body complex protein fliE [Marinomonas
           mediterranea MMB-1]
 gi|326547235|gb|ADZ92455.1| Flagellar hook-basal body complex protein fliE [Marinomonas
           mediterranea MMB-1]
          Length = 121

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIM 80
                + N+   +    FS +L+        + + A  ++ A  +G     + E +  + 
Sbjct: 34  SQDGLSVNDVTSADKSEFSDMLKQAIDQVNSNQKAATALAQAYERGDPNVDLPEVMIGLQ 93

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++  +      +R+K++ A  ++  M +
Sbjct: 94  KSSISFEAMTQVRNKLVDAYEKIMNMPV 121


>gi|299534788|ref|ZP_07048118.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
 gi|298729876|gb|EFI70421.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
          Length = 101

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 6/106 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   +             + T   N     +  SF+  L++           ++  + 
Sbjct: 1   MAISSISLMTP-----TQVVNNTNKLNATPYEAQQSFANSLKEAIAKVNDQQITSDKFTQ 55

Query: 64  AALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++G    + E +    +A  TLN +I +R+K++ A  E+ +M +
Sbjct: 56  KLIKGEDVELHEVMIASQKASITLNATIEVRNKVIEAYQEIMRMSV 101


>gi|258514002|ref|YP_003190224.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777707|gb|ACV61601.1| flagellar hook-basal body complex subunit FliE [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 99

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERT 85
           Q  ++  GSS   FS  L +           A+N+S   L G+   + +    + +A+ +
Sbjct: 17  QQESQNDGSSKSDFSTFLAEAVNKLNSSQVDADNLSEKFLTGEVDNLHQVTIAMEKAKLS 76

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L++ +R+K + A  E+S+MQI
Sbjct: 77  MQLAMQVRNKFVEAYQEISRMQI 99


>gi|149188084|ref|ZP_01866379.1| flagellar hook-basal body protein FliE [Vibrio shilonii AK1]
 gi|148838072|gb|EDL55014.1| flagellar hook-basal body protein FliE [Vibrio shilonii AK1]
          Length = 103

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            +   +   T+ +    ++ +         +F  +L        G  + + ++ +   +G
Sbjct: 3   VDGLHNEMQTMMLEAANSKPAANA-HQVGANFGDMLSQAVNNVNGLQKSSGDLQMRFDRG 61

Query: 69  KTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + + +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  DADVSLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|323491445|ref|ZP_08096629.1| flagellar hook-basal body protein FliE [Vibrio brasiliensis LMG
           20546]
 gi|323314314|gb|EGA67394.1| flagellar hook-basal body protein FliE [Vibrio brasiliensis LMG
           20546]
          Length = 103

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            + F S    +      T+ +   G +    F  +L           + + N+ +   +G
Sbjct: 3   IDGFQSEMQAMMFEAGGTKPTAT-GQTVGADFGQMLNSAINNVNSLSKTSGNLQMRFDRG 61

Query: 69  KTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + + +    ++    + +I +R+K++ A  E+  M +
Sbjct: 62  DADVSLSDVMIARNKSSVAFDATIQVRNKLVEAYKELMNMPV 103


>gi|322382304|ref|ZP_08056211.1| flagellar hook-basal body protein FliE-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153657|gb|EFX46032.1| flagellar hook-basal body protein FliE-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 92

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDH 78
            ++    + +      +   F + L D            ++++   ++G+ T + + +  
Sbjct: 3   QVQDVQDKTNPAGAAQATEKFGSFLLDAIDDLNKQQLSVDDMNQKFVKGEITDIHQLMVA 62

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A   L L++ +R+K + A  ++ ++QI
Sbjct: 63  SEKASLGLELAVQVRNKAIEAYQDIMRIQI 92


>gi|23099009|ref|NP_692475.1| flagellar hook-basal body protein FliE [Oceanobacillus iheyensis
           HTE831]
 gi|38503021|sp|Q8EQY4|FLIE_OCEIH RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|22777237|dbj|BAC13510.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 102

 Score = 70.4 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            +   ++   I                +  +F++ L++  +       +++  + A   G
Sbjct: 3   ISIMGNNVTPIQPNESV-NQVKRSPSEAQANFASTLKNAIEDLNHIQLESDKKTEAFASG 61

Query: 69  KTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K   + + +    ++  TL  ++ ++ K++ A +E+ +MQ+
Sbjct: 62  KIDDLHDVMITAQKSSVTLETTVQVQKKVIDAYNEIMRMQV 102


>gi|118581825|ref|YP_903075.1| flagellar hook-basal body complex subunit FliE [Pelobacter
           propionicus DSM 2379]
 gi|118504535|gb|ABL01018.1| flagellar hook-basal body complex subunit FliE [Pelobacter
           propionicus DSM 2379]
          Length = 100

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 34/93 (36%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREA 75
             +G+   F    + +  S          ++         +++        G+  ++ E 
Sbjct: 8   SGLGIGSAFPATGSAKQTSPVEGAGKFFTELVSKVNDLQNQSDRAIQGLASGENKNLHEV 67

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  + +A  +      +R+K + A  EV +MQ+
Sbjct: 68  MISMEKASISFLFMSQVRNKAIEAYQEVMRMQL 100


>gi|51894140|ref|YP_076831.1| flagellar hook-basal body protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857829|dbj|BAD41987.1| flagellar hook-basal body protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 99

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I   + +          N        SF  +L +  +    D   A  +++    G+   
Sbjct: 3   IQRINAMLSLEPTISRENRSEVREGTSFGDVLANAIRQVEQDQRHANEMAVRLAAGEVED 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
           + + +    +A  +LNL+I +R+K++ A  E+ +M
Sbjct: 63  IAQVMIASERASLSLNLAIQVRNKVIEAYQEIMRM 97


>gi|127512296|ref|YP_001093493.1| flagellar hook-basal body complex subunit FliE [Shewanella loihica
           PV-4]
 gi|126637591|gb|ABO23234.1| flagellar hook-basal body complex subunit FliE [Shewanella loihica
           PV-4]
          Length = 110

 Score = 70.0 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          + T  I         + +   +S   F +LL +           + +
Sbjct: 1   MQIGANSLLQEMQTLTGEIKPNGITPNITQQVANTSGSDFGSLLSEAVGNVNALQATSSS 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +      G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  LQTRLDMGDTRVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 110


>gi|303326605|ref|ZP_07357047.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
           3_1_syn3]
 gi|302862593|gb|EFL85525.1| flagellar hook-basal body complex protein FliE [Desulfovibrio sp.
           3_1_syn3]
          Length = 148

 Score = 70.0 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSI 90
              +   SF   ++                      G++ ++ E +  + ++   + L+ 
Sbjct: 71  TPVTPSNSFGDTIKGSLNKVNELQSAKAQAIDDFASGRSQNVHELMITMQKSSLAMKLTS 130

Query: 91  ALRDKILSAVSEVSKMQ 107
           A+R K+L A  E+SKMQ
Sbjct: 131 AVRGKVLEAYKEISKMQ 147


>gi|260767707|ref|ZP_05876642.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
 gi|260617216|gb|EEX42400.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
 gi|315179461|gb|ADT86375.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           NCTC 11218]
          Length = 94

 Score = 70.0 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      F  +L        G  + + ++ +   +G    S+ + 
Sbjct: 2   QAMMVEAANSRPAATGQKVGADFGDMLTQAINNVNGLQKTSSDLQMRFDRGDEGVSLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94


>gi|319790421|ref|YP_004152054.1| flagellar hook-basal body complex subunit FliE [Thermovibrio
           ammonificans HB-1]
 gi|317114923|gb|ADU97413.1| flagellar hook-basal body complex subunit FliE [Thermovibrio
           ammonificans HB-1]
          Length = 94

 Score = 70.0 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
             + E       F  LL +       D  KA  V  A  +G+  ++ EAV  I +A+ +L
Sbjct: 13  PLSREKKQESSGFEELLTNFIASVNADQLKAREVEKALSRGEVKNLEEAVLTIEKADLSL 72

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + LR+K L +  E+ +MQ+
Sbjct: 73  RLLVELRNKALESYQEIMRMQV 94


>gi|166712033|ref|ZP_02243240.1| flagellar protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 138

 Score = 70.0 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 46  ARGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPNADLARV 105

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 106 MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 138


>gi|269965706|ref|ZP_06179819.1| Flagellar hook-basal body complex protein fliE [Vibrio
           alginolyticus 40B]
 gi|269829774|gb|EEZ84010.1| Flagellar hook-basal body complex protein fliE [Vibrio
           alginolyticus 40B]
          Length = 103

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            +I G  + +       M           G      F+ LL           + + ++  
Sbjct: 1   MKIDGIQAEMRAM----MVEATNTAPTASGAKVGADFNDLLTKAINNVNTLQKASGDLQT 56

Query: 64  AALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +G     + + +    ++    + ++ +R+K++ A  ++  M +
Sbjct: 57  RFDRGDADVSLSDVMIARNKSSVAFDATVQIRNKLVEAYKDLMNMPV 103


>gi|152990372|ref|YP_001356094.1| flagellar hook-basal body complex protein FliE [Nitratiruptor sp.
           SB155-2]
 gi|151422233|dbj|BAF69737.1| flagellar hook-basal body complex protein FliE [Nitratiruptor sp.
           SB155-2]
          Length = 99

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I     +G++       + +       FS LL         D+ KA+        GK  +
Sbjct: 3   IDGVGQVGIQSSVLNIDDVKDTQHNEGFSDLLTQFIAEVNQDLTKAKEAEKLLQSGKVEN 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + E +  I +A+ +L  +   R+K + A  E+ +MQI
Sbjct: 63  LIETMAAIEKADISLRFATEFRNKAIEAYQEIMRMQI 99


>gi|225159032|ref|ZP_03725342.1| Flagellar hook-basal body protein-like protein [Opitutaceae
           bacterium TAV2]
 gi|224802411|gb|EEG20673.1| Flagellar hook-basal body protein-like protein [Opitutaceae
           bacterium TAV2]
          Length = 130

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 38/105 (36%), Gaps = 1/105 (0%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
                 + +S        +          G++ + F A+ +            A   +  
Sbjct: 26  AASAGLAPMSGASAASGLFPAGDAIASSSGAAALDFGAVFEKAVAAVNDKQVAATQATRD 85

Query: 65  ALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            L G +  + +++  + +A    +L + +R+K++    E+ +M +
Sbjct: 86  VLLGNSDKLHQSMIALQEASVAFSLMVEVRNKVVDGYQELMRMPV 130


>gi|254470039|ref|ZP_05083443.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
           JE062]
 gi|211960350|gb|EEA95546.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
           JE062]
          Length = 114

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
           + I    S  +       +      +  E G    +F  ++Q          + A+  SL
Sbjct: 10  DTIMSNASIAASAYANTAKLSNPLEAASETGDKSGAFGNMVQSAISEINESGQIADVQSL 69

Query: 64  AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             LQGK ++ + V  + + E  L   +++RD+++SA  E+ +M I
Sbjct: 70  DLLQGKANVVDVVTAVAETELALETVVSVRDRVISAYEEIMRMPI 114


>gi|304316909|ref|YP_003852054.1| flagellar hook-basal body complex subunit FliE
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778411|gb|ADL68970.1| flagellar hook-basal body complex subunit FliE
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 95

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
            + I         S     ++  SF  +L+           K++      + G    +  
Sbjct: 2   INPISQINSMGSISASSTTNNSTSFGDILKTAIADVNNLQLKSQQDDQMLVTGDINDIHN 61

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +    +A+  L L+I +++KIL+A  E+ +M +
Sbjct: 62  VMIDATKADIALELTIQIKNKILAAYQEIMRMPV 95


>gi|269961617|ref|ZP_06175979.1| Flagellar hook-basal body complex protein fliE [Vibrio harveyi
           1DA3]
 gi|269833658|gb|EEZ87755.1| Flagellar hook-basal body complex protein fliE [Vibrio harveyi
           1DA3]
          Length = 103

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +       M           G      F  LL           + + ++  
Sbjct: 1   MKVDGIQAEMRAM----MVEATNTAPVATGAKVGADFGDLLTKAINNVNSLQKASGDLQT 56

Query: 64  AALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +G     + + +    ++    + ++ +R+K++ +  ++  M +
Sbjct: 57  RFDRGDADVSLSDVMIARNKSSVAFDATVQIRNKLVESYKDLMNMPV 103


>gi|89094456|ref|ZP_01167396.1| flagellar hook-basal body complex protein [Oceanospirillum sp.
           MED92]
 gi|89081348|gb|EAR60580.1| flagellar hook-basal body complex protein [Oceanospirillum sp.
           MED92]
          Length = 117

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 2/96 (2%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSM 72
            + +  M      +      S    F  +L++   G       A+ +++A  +G     +
Sbjct: 22  QSASSEMMPVNPTDIGAVKPSDRTGFGEILKNAVDGVSETQADAKKMAVAYEKGDPSVDL 81

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +    +A  +      +R+++++A  +V KM I
Sbjct: 82  PQVMIAAEKASVSFQAMTQVRNRLVTAYEDVMKMPI 117


>gi|150019081|ref|YP_001311335.1| flagellar hook-basal body complex subunit FliE [Clostridium
           beijerinckii NCIMB 8052]
 gi|149905546|gb|ABR36379.1| flagellar hook-basal body complex subunit FliE [Clostridium
           beijerinckii NCIMB 8052]
          Length = 105

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILS 98
           F  +L+       G M +A+  +   ++G   ++ E +    +A  +L      RDK+L 
Sbjct: 36  FGDVLKKAVDDTNGKMTQADETATKFIKGEDVNIDEVMIKNQEASLSLQFLAQTRDKLLE 95

Query: 99  AVSEVSKMQI 108
             +++S++Q+
Sbjct: 96  GYNQLSRLQL 105


>gi|302392397|ref|YP_003828217.1| flagellar hook-basal body complex subunit FliE [Acetohalobium
           arabaticum DSM 5501]
 gi|302204474|gb|ADL13152.1| flagellar hook-basal body complex subunit FliE [Acetohalobium
           arabaticum DSM 5501]
          Length = 98

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 29  SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLN 87
           +         SF  +  +         ++ + ++     G+   + + +    +A+  L+
Sbjct: 18  NQNNKVEGKDSFKKVFNNALHKVNNLQKQQDVMAKKLATGEVDNIHQVMVTATKAKLALD 77

Query: 88  LSIALRDKILSAVSEVSKMQI 108
           L++ +R+K + +  E+ +MQ+
Sbjct: 78  LTLEIRNKAVESYKEIMRMQV 98


>gi|119775433|ref|YP_928173.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           amazonensis SB2B]
 gi|119767933|gb|ABM00504.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           amazonensis SB2B]
          Length = 111

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 26  TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAE 83
            Q   + G +S   F++LL +         + + +++     G    ++ + V    +A 
Sbjct: 27  PQPLRQVGNTSGADFASLLANAVGHVNELQQSSSSLATRLDMGDTRVTLSDTVIAREKAS 86

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
                ++ +R+K++ A  E+  M +
Sbjct: 87  VAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|332674369|gb|AEE71186.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
           83]
          Length = 109

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|118588699|ref|ZP_01546107.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
           12614]
 gi|118438685|gb|EAV45318.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
           12614]
          Length = 106

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 46/99 (46%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+       +  +    ++       + + F AL+ +   G +     A++ ++  ++GK
Sbjct: 8   NNAYQMAAKLQQQARAIEDKAGAPEVAGLDFGALVNEAVGGVVDKGRVADDKAVGLVEGK 67

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + + V  I + E  L   +A+RD+++SA  E+ +M I
Sbjct: 68  ADVVDVVTAIAETEVALETMVAVRDRVISAYEEIMRMPI 106


>gi|39995517|ref|NP_951468.1| flagellar hook-basal body complex protein FliE [Geobacter
           sulfurreducens PCA]
 gi|39982280|gb|AAR33741.1| flagellar hook-basal body complex protein FliE [Geobacter
           sulfurreducens PCA]
 gi|298504517|gb|ADI83240.1| flagellar hook-basal body complex protein FliE [Geobacter
           sulfurreducens KN400]
          Length = 100

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 36/108 (33%), Gaps = 9/108 (8%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+ I+                   +       +    F     ++         +++  
Sbjct: 1   MIDGIESGLGIAQ-----AFPSVTGEAKPGNLAADGGKF---FGELVSKVSELQAQSDTA 52

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + G++  + E +  + ++  +      +R+K + A  EV +MQ+
Sbjct: 53  IKGLVSGESKGLHEVMIAMEKSSISFQFLSQVRNKAVEAYQEVMRMQV 100


>gi|15615022|ref|NP_243325.1| flagellar hook-basal body protein FliE [Bacillus halodurans C-125]
 gi|38503192|sp|Q9KA31|FLIE_BACHD RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|10175079|dbj|BAB06178.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
          Length = 102

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
           + + +  +      +  +F   L           + +   +    +GK   + + +    
Sbjct: 15  QANSSSVNKHTPAEAQETFKQALSQAINNVNDLQKVSAEKTELLAKGKIEDLHDVMITGQ 74

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A  TL+ ++ +R+K++ A  E+ +MQ+
Sbjct: 75  KASITLSATVEIRNKVIEAYQEIMRMQV 102


>gi|126697818|ref|YP_001086715.1| flagellar hook-basal body protein FliE [Clostridium difficile 630]
 gi|115249255|emb|CAJ67068.1| Flagellar hook-basal body complex protein FliE [Clostridium
           difficile]
          Length = 105

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 2/106 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ I       +     +           +F  ++ D           A+++  
Sbjct: 1   MPITQINNLIQGAKLDNLI-GEAKPLTLNNKEEKKNFEDVIIDTIDKVNFQQVTADDMKE 59

Query: 64  AALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++G   SM E +    +A+ ++   I +R+KI  A  E++K+QI
Sbjct: 60  KFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI 105


>gi|317179759|dbj|BAJ57547.1| flagellar hook-basal body protein FliE [Helicobacter pylori F30]
          Length = 109

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++      + G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMVTGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|154173661|ref|YP_001408542.1| flagellar hook-basal body protein FliE [Campylobacter curvus
           525.92]
 gi|112803041|gb|EAU00385.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           curvus 525.92]
          Length = 98

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
            I++ + +        +      +    F+++L D  K      E A+        G+  
Sbjct: 1   MINNIEKLNGVSGSQNSKKIAPATDGSDFASMLNDSLKELNKVQENADKAIADLATGEVK 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +A   I +AE ++ L + +R+K LSA  E+S+ QI
Sbjct: 61  DLHQAALAIGKAETSMKLMLEIRNKALSAYKEISRTQI 98


>gi|313901522|ref|ZP_07834969.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468217|gb|EFR63684.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
           subterraneus DSM 13965]
          Length = 125

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
              G    SF   L    +   G   +A+ ++   + G+   + + +    +A   + L+
Sbjct: 47  TGPGGVGPSFLQELARALQQLEGAAGEADAMARRLVTGQVQDLSQVMVASEKARLAIELA 106

Query: 90  IALRDKILSAVSEVSKMQI 108
           + LR+K L A  E+ +M +
Sbjct: 107 VQLRNKALEAYQEIMRMPV 125


>gi|317052366|ref|YP_004113482.1| flagellar hook-basal body complex subunit FliE [Desulfurispirillum
           indicum S5]
 gi|316947450|gb|ADU66926.1| flagellar hook-basal body complex subunit FliE [Desulfurispirillum
           indicum S5]
          Length = 106

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             ++ +     +       + ++ +       FS  L+   K      + A+      + 
Sbjct: 5   NIHNSMPLLLDMTKPTGKPEATSAQPSGEQTQFSEFLKSSLKEVNTAQKDADRAIEELIA 64

Query: 68  GKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G++  +   +  + QA+ +L + + +R+KI+ A  EV + Q+
Sbjct: 65  GESKDIHTTMIKMQQADVSLKMMMQVRNKIMDAYQEVMRTQV 106


>gi|262393587|ref|YP_003285441.1| flagellar hook-basal body complex protein FliE [Vibrio sp. Ex25]
 gi|262337181|gb|ACY50976.1| flagellar hook-basal body complex protein FliE [Vibrio sp. Ex25]
          Length = 103

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           I       M           G      F+ LL           + + ++     +G    
Sbjct: 6   IQAEMRAMMVEATNTAPTASGAKVGADFNDLLTKAINNVNTLQKASGDLQTRFDRGDADV 65

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    ++    + ++ +R+K++ A  ++  M +
Sbjct: 66  SLSDVMIARNKSSVAFDATVQIRNKLVEAYKDLMNMPV 103


>gi|268680291|ref|YP_003304722.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618322|gb|ACZ12687.1| flagellar hook-basal body complex subunit FliE [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 98

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
             +  D +    + +  +  +  S    FS +LQ+          K +        G+  
Sbjct: 1   MYNSIDKLSSLTNTSNATLTKTESVGEDFSKILQNSIDEINDTQVKGDRAMADLATGEVK 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +A   I +AE ++ L + +R+K LSA  E+SK QI
Sbjct: 61  DLHQAAIAINKAETSMKLMLEIRNKALSAYKEISKTQI 98


>gi|237653558|ref|YP_002889872.1| flagellar hook-basal body complex subunit FliE [Thauera sp. MZ1T]
 gi|237624805|gb|ACR01495.1| flagellar hook-basal body complex subunit FliE [Thauera sp. MZ1T]
          Length = 107

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           +G +  +S   ++            +  +  ++F+ +L    K       +A  ++    
Sbjct: 4   RGIDQMLSELRSVSQAAQGKAAPAADAPAGGVNFADVLNTALKDVSAAQGEARAMAQNFS 63

Query: 67  QG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G    ++++ + ++ +A  +    + +R+++++A  ++  M +
Sbjct: 64  AGDPNVNLQDVMVNLQKASMSFQQMVQVRNRLVTAYQDIMNMPV 107


>gi|45436239|gb|AAS61795.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Microtus str. 91001]
 gi|262361813|gb|ACY58534.1| flagellar basal body protein [Yersinia pestis D106004]
          Length = 123

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A   + 
Sbjct: 21  MSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFASELKAAIGKISENQQVARTSAQ 76

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + +  ++  +L L I +R+K+++A  EV  M +
Sbjct: 77  NFELGVPGVGLNDVMVNAQKSSVSLQLGIQVRNKLVAAYQEVMNMGV 123


>gi|312792646|ref|YP_004025569.1| flagellar hook-basal body complex subunit flie
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312179786|gb|ADQ39956.1| flagellar hook-basal body complex subunit FliE
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 104

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-K 69
           +F S +     ++     ++    +S +SF   L    +G  G  ++A+  +   L G  
Sbjct: 6   NFDSISKAFEKQFSSMNTNSASTQNSQVSFVDFLYKALEGVDGLQKEADYQNNLFLLGLS 65

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + ++A+    +A   L L++ +R+KIL A +E+ +MQ+
Sbjct: 66  ANPQDAIVASEKASIALQLTLQIRNKILDAYNEIMRMQV 104


>gi|114319869|ref|YP_741552.1| flagellar hook-basal body complex subunit FliE [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226263|gb|ABI56062.1| flagellar hook-basal body complex subunit FliE [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 108

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M ++     N  +     +  +    +  +  G +    F+ L+++  +   G  + +  
Sbjct: 1   MKVDNSFQINQALQQLREVAAQAGN-EPVSGRGEAPGADFTRLMREALENVNGLQQTSSA 59

Query: 61  VSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ A  +G+  ++ E +    ++          R+++L A  EVS MQ+
Sbjct: 60  MTDAVARGEEVNLTEVMVATQKSRVAFEALKETRNRLLEAYQEVSNMQV 108


>gi|74055033|gb|AAZ95838.1| FliE [Aeromonas hydrophila]
          Length = 105

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 31/103 (30%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             +S +     +           + G      F  LLQ            A ++      
Sbjct: 4   SASSLMQEMQAL-KVESGATPLTQPGRQVTSDFGQLLQQALGNVNELQGAANDLRTRFDM 62

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + E +    ++      ++ +R+K++ A   +  M +
Sbjct: 63  GDKSIDLSEVMIAGQKSSIAFEATVQVRNKMVDAYKTIMNMPV 105


>gi|315585964|gb|ADU40345.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
           35A]
          Length = 109

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 26  TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAER 84
            ++ +         FS LL+          E+++        G+   + +A   I +AE 
Sbjct: 26  GESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAET 85

Query: 85  TLNLSIALRDKILSAVSEVSKMQI 108
           ++ L + +R+K +SA  E+ + QI
Sbjct: 86  SMKLMLEVRNKAISAYKELLRTQI 109


>gi|253998467|ref|YP_003050530.1| flagellar hook-basal body protein FliE [Methylovorus sp. SIP3-4]
 gi|253985146|gb|ACT50003.1| flagellar hook-basal body complex subunit FliE [Methylovorus sp.
           SIP3-4]
          Length = 117

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 1   MMIEQIQG--TNSFISHTDTIGMRYDFTQ-----NSNEEGGSSPISFSALLQDMAKGAIG 53
           M I  I      S ++       +           ++    +  + F+  L+        
Sbjct: 1   MAINGIDSSRIESMLAQIRAATQKPAMAPVAETTPASNTQSTPKVDFAETLKASLNQVNQ 60

Query: 54  DMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +AE +      G    S+ + +    +A  +   ++ +R+K++SA  ++  MQ+
Sbjct: 61  SQLEAERLGKNFAMGDDSVSLSDVMIAGQKANISFQATLQVRNKLVSAYQDIMNMQV 117


>gi|145298345|ref|YP_001141186.1| flagellar hook-basal body protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851117|gb|ABO89438.1| flagellar hook-basal body protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 105

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             +S +     +           + G      F  LLQ            A ++      
Sbjct: 4   SASSLMQEMQAL-KVEAGATPLTQPGRQVTSDFGQLLQQALGNVNELQGAANDLRTRFDM 62

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + + +    ++      ++ +R+K++ A   +  M +
Sbjct: 63  GDKSVDLSDVMIAGQKSSIAFEATVQVRNKMVDAYKTIMNMPV 105


>gi|42524764|ref|NP_970144.1| hypothetical protein Bd3405 [Bdellovibrio bacteriovorus HD100]
 gi|39576974|emb|CAE78203.1| fliE [Bdellovibrio bacteriovorus HD100]
          Length = 111

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKI 96
            SF+  L+D         + ++        GKT  + + +    +A+  L + + +R+KI
Sbjct: 40  KSFADTLKDAVGSVNEMQKASDKAMQNLATGKTDNVADVMIAAEKADIALKVMVQVRNKI 99

Query: 97  LSAVSEVSKMQI 108
           + A  EV KMQ+
Sbjct: 100 IDAYQEVMKMQV 111


>gi|170725972|ref|YP_001759998.1| flagellar hook-basal body complex subunit FliE [Shewanella woodyi
           ATCC 51908]
 gi|169811319|gb|ACA85903.1| flagellar hook-basal body complex subunit FliE [Shewanella woodyi
           ATCC 51908]
          Length = 110

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          S +  I       Q + +   +S   F  LL             +  
Sbjct: 1   MQIGANSLLQEMKSLSGEIPTGSITPQITQQVRSTSGSDFGELLSQAVTSVGELQANSGE 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S     G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  LSSRLDMGDTRVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 110


>gi|116327144|ref|YP_796864.1| flagellar hook-basal body protein FliE [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332199|ref|YP_801917.1| flagellar hook-basal body protein FliE [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119888|gb|ABJ77931.1| Endoflagellar hook-basal body protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116125888|gb|ABJ77159.1| Endoflagellar hook-basal body protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 127

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERT 85
                      SFS  +++          +A+ ++   +         E +    +A   
Sbjct: 46  KQPVSPDYVAESFSEAMKNALTSVNDLQVEADELTQKMVFDPNSVDAHEVMIASEKARVA 105

Query: 86  LNLSIALRDKILSAVSEVSKM 106
           L  +  + D ++ A  E++ +
Sbjct: 106 LTFTKTIADGVVRAYRELTSL 126


>gi|120554915|ref|YP_959266.1| flagellar hook-basal body complex subunit FliE [Marinobacter
           aquaeolei VT8]
 gi|166214851|sp|A1U260|FLIE_MARAV RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|120324764|gb|ABM19079.1| flagellar hook-basal body complex subunit FliE [Marinobacter
           aquaeolei VT8]
          Length = 122

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERT 85
               +      SFS +L            +A  +  A   G     +   +    ++  +
Sbjct: 40  PRQVQETQEVPSFSDMLGKAVNNVHEVQSQASELRTAYEMGDPNVDITRVMIAAQKSSVS 99

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
                 +R++++ A  ++  M I
Sbjct: 100 FEALTQVRNRVVRAYEDIMNMPI 122


>gi|190574240|ref|YP_001972085.1| putative flagellar hook-basal body complex protein
           [Stenotrophomonas maltophilia K279a]
 gi|194365658|ref|YP_002028268.1| flagellar hook-basal body complex subunit FliE [Stenotrophomonas
           maltophilia R551-3]
 gi|190012162|emb|CAQ45785.1| putative flagellar hook-basal body complex protein
           [Stenotrophomonas maltophilia K279a]
 gi|194348462|gb|ACF51585.1| flagellar hook-basal body complex subunit FliE [Stenotrophomonas
           maltophilia R551-3]
          Length = 121

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
              ++                +   + P SF+  L+    G     +K+  ++ A   G 
Sbjct: 21  QPALNPLGETPRSNALPGTVLDAPQAQPASFTETLRGAIAGVNDAQQKSGALAKAFEMGD 80

Query: 70  --TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + + +    Q++     ++ +R++++ A  +V  M +
Sbjct: 81  PSADLAKVMVASQQSQIAFRATVEVRNRLVQAYQDVMNMPL 121


>gi|255305271|ref|ZP_05349443.1| flagellar hook-basal body protein FliE [Clostridium difficile ATCC
           43255]
          Length = 105

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 2/106 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ I       +     +           +F  ++ D           A+++  
Sbjct: 1   MPITQINNLIQGAKLDNLI-GEAKPLTLNNKEEKKNFEDVIIDTVDKVNFQQVTADDMKE 59

Query: 64  AALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++G   SM E +    +A+ ++   I +R+KI  A  E++K+QI
Sbjct: 60  KFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI 105


>gi|33596158|ref|NP_883801.1| flagellar hook-basal body complex protein FliE [Bordetella
           parapertussis 12822]
 gi|33601566|ref|NP_889126.1| flagellar hook-basal body complex protein FliE [Bordetella
           bronchiseptica RB50]
 gi|33573161|emb|CAE36813.1| flagellar hook-basal body complex protein FliE [Bordetella
           parapertussis]
 gi|33576002|emb|CAE33082.1| flagellar hook-basal body complex protein FliE [Bordetella
           bronchiseptica RB50]
          Length = 110

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +S    +         +  E    P  F+A LQ   +        A +
Sbjct: 1   MAVSGLSGIESMLSQMRAVVRAAQSGGATEAELAPGPSGFAAELQRSIRRVSQAQNAASD 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G    S+ + +  + +A      S+ +R+++++A  E+S M +
Sbjct: 61  QAKAFELGAPGISLNDVMIDLQKASLGFQTSVQVRNRLVAAYKEISSMAV 110


>gi|34557979|ref|NP_907794.1| flagellar hook-basal body protein FliE [Wolinella succinogenes DSM
           1740]
 gi|34483697|emb|CAE10694.1| FLAGELLAR HOOK-BASAL BODY PROTEIN [Wolinella succinogenes]
          Length = 100

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           + I+  + +      + +++    S   SF+ +L+          +++E        G+ 
Sbjct: 2   AEINTLNKVTSLATSSSSTSSPVESEGKSFAEILKGSIDEGNLLQKESEKALADIATGQV 61

Query: 71  -SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A   I +AE ++ L + +R+K +SA  E+ + QI
Sbjct: 62  KDLHQAAIAIGKAENSMKLMLEVRNKAISAYKEILRTQI 100


>gi|255321463|ref|ZP_05362621.1| flagellar hook-basal body complex protein FliE [Campylobacter
           showae RM3277]
 gi|255301319|gb|EET80578.1| flagellar hook-basal body complex protein FliE [Campylobacter
           showae RM3277]
          Length = 100

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I    ++   ++  +    +     ++F  +L +  K        A+        G+   
Sbjct: 4   IDKIGSVASPFEKKEAKTLQNQKGELNFGDMLDNSLKELNEIQINADKAIADLATGEVKD 63

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +A   I +A+ ++ L + +R+K LSA  E+S+ QI
Sbjct: 64  LHQAAIAIGKADTSMKLMLEIRNKALSAYKEISRTQI 100


>gi|91792681|ref|YP_562332.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
 gi|91714683|gb|ABE54609.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
          Length = 113

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 2/105 (1%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +Q   S                   +   +    F  LL        G  + + +++   
Sbjct: 9   LQEMQSLRGEITPSLTNGIRPNMLQQVNNTQGADFGQLLSQAVGSVNGLQQNSASLATRL 68

Query: 66  LQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 69  DMGDTRVSLSDTVIAREKAGVAFEATVQVRNKLVEAYKEIMSMPV 113


>gi|310659046|ref|YP_003936767.1| flie [Clostridium sticklandii DSM 519]
 gi|308825824|emb|CBH21862.1| FliE [Clostridium sticklandii]
          Length = 99

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILS 98
           FS  L++         +  + ++   + GK   + +       +       + ++++++ 
Sbjct: 30  FSEFLKNSIYNVSDSQKHTQELTEMLIAGKLDNLHDLTIAAEVSSVNFQALVEVKNRVID 89

Query: 99  AVSEVSKMQI 108
           A  E+ ++Q+
Sbjct: 90  AYKEIMRIQV 99


>gi|90415353|ref|ZP_01223287.1| Flagellar hook-basal body complex protein [marine gamma
           proteobacterium HTCC2207]
 gi|90332676|gb|EAS47846.1| Flagellar hook-basal body complex protein [marine gamma
           proteobacterium HTCC2207]
          Length = 115

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 8/115 (6%)

Query: 2   MIEQIQG--TNSFISHTDTIGMRYDFTQNSNEEGGSSPI-----SFSALLQDMAKGAIGD 54
           M+  +      S +S       +     N +             SF+  ++         
Sbjct: 1   MVSPVNAGNVESLLSQIREYQAQAAQGVNLSPGERVDGQVVNRNSFADAVKGALNEVNSA 60

Query: 55  MEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A+    A  +G    + + V ++ ++      ++ +R+K+L A  ++  M +
Sbjct: 61  QGLAKASRAAYERGEDIPLTDVVMNMQKSSLAFEATLQIRNKVLKAYEDIMNMPV 115


>gi|254780379|ref|YP_003064792.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040056|gb|ACT56852.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 108

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN
Sbjct: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI
Sbjct: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108


>gi|119715007|ref|YP_921972.1| flagellar hook-basal body complex subunit FliE [Nocardioides sp.
           JS614]
 gi|226704236|sp|A1SEQ0|FLIE_NOCSJ RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|119535668|gb|ABL80285.1| flagellar hook-basal body complex subunit FliE [Nocardioides sp.
           JS614]
          Length = 105

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 6/109 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  I+G                   +       +  +F  ++ D         +K++ 
Sbjct: 1   MSVNGIEGIG-----FTPYVAPQLNPTDPVRGSSQAGAAFGDMVIDGLDRLEAVQDKSDR 55

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +++ A  G    + +      +A  T  L++A+R++ L A +E+ +M I
Sbjct: 56  LAVQAATGDLNDIHDYTIAATEASVTTQLTVAVRNRALEAFNEIMRMPI 104


>gi|285018181|ref|YP_003375892.1| flagellar hook-basal body complex protein flie [Xanthomonas
           albilineans GPE PC73]
 gi|283473399|emb|CBA15904.1| probable flagellar hook-basal body complex protein flie
           [Xanthomonas albilineans]
          Length = 120

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE-----------GGSSPISFSALLQDMAKG 50
           M + I    S I        +    +  +              G    SFS  L++   G
Sbjct: 1   MSDSISSILSQIRSYQGQVGQAAPARVGDTARSNAIEGLTGNQGVQGPSFSETLRNAISG 60

Query: 51  AIGDMEKAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + + N++ A   G  +  + + +    Q++     ++ +R++++ A  +V  M +
Sbjct: 61  VNEAQQNSGNLAKAFELGDPNAGLAKVMLAAQQSQVAFRATVEVRNRLVQAYQDVMNMPL 120


>gi|161581995|ref|NP_231765.2| flagellar hook-basal body protein FliE [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|255745128|ref|ZP_05419077.1| flagellar hook-basal body complex protein FliE [Vibrio cholera CIRS
           101]
 gi|262153483|ref|ZP_06028613.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           INDRE 91/1]
 gi|262167494|ref|ZP_06035200.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           RC27]
 gi|262191384|ref|ZP_06049574.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae CT
           5369-93]
 gi|255736958|gb|EET92354.1| flagellar hook-basal body complex protein FliE [Vibrio cholera CIRS
           101]
 gi|262024066|gb|EEY42761.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           RC27]
 gi|262030720|gb|EEY49354.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           INDRE 91/1]
 gi|262032759|gb|EEY51307.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae CT
           5369-93]
 gi|327484663|gb|AEA79070.1| Flagellar hook-basal body complex protein FliE [Vibrio cholerae
           LMA3894-4]
          Length = 103

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--T 70
           +++     M           G      F A+L        G  + + ++     +G    
Sbjct: 6   LNNEMQAMMFEAMNTQPASTGQKVGADFGAMLTKAINNVNGLQKTSSDMQTRFDRGDEGI 65

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 66  SLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 103


>gi|309779473|ref|ZP_07674234.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
           5_7_47FAA]
 gi|308921714|gb|EFP67350.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
           5_7_47FAA]
          Length = 109

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 3/110 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +       S ++           +  ++ E G   + F ++L+          +KAE+
Sbjct: 1   MDLSNAHSVVSLMNSVLAPTSAVGGST-ASGEAGKPSVDFGSVLKSSLDRVDASQQKAES 59

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +S +   G     + + +  + +A   +  ++ +R+K++SA   +  M I
Sbjct: 60  ISRSFEMGNNDVDLHDVMLSLQKANIDMQTAVQVRNKLVSAYQSIMSMSI 109


>gi|254785457|ref|YP_003072886.1| flagellar hook-basal body complex protein FliE [Teredinibacter
           turnerae T7901]
 gi|259646004|sp|C5BSE0|FLIE_TERTT RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|237684569|gb|ACR11833.1| flagellar hook-basal body complex protein FliE [Teredinibacter
           turnerae T7901]
          Length = 120

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHI 79
                Q +++    +   F  LL+          + + +++ + ++G     + + +   
Sbjct: 32  ADRAVQGADQARKLNGPQFGELLEQAVNKVNEVQQASSSMAESYVRGDSSVDVTDVMIAS 91

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A    +  + +R+K++ A  +V  M I
Sbjct: 92  QKAGVAFDAMVQVRNKLVEAYRDVMNMPI 120


>gi|52080222|ref|YP_079013.1| flagellar hook-basal body protein FliE [Bacillus licheniformis ATCC
           14580]
 gi|52785599|ref|YP_091428.1| flagellar hook-basal body protein FliE [Bacillus licheniformis ATCC
           14580]
 gi|319645999|ref|ZP_08000229.1| FliE protein [Bacillus sp. BT1B_CT2]
 gi|52003433|gb|AAU23375.1| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
 gi|52348101|gb|AAU40735.1| FliE [Bacillus licheniformis ATCC 14580]
 gi|317391749|gb|EFV72546.1| FliE protein [Bacillus sp. BT1B_CT2]
          Length = 105

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           + G + F   +   G        + ++G  + +SFS +L+D          +++ ++ A 
Sbjct: 2   VNGISPFGVQSVQAGTNATNQIKNKQDGSENQVSFSNVLKDSINALNQSQNESDKLTNAL 61

Query: 66  LQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G+  ++ E +    +A  TL  +   R+K + A  E+ +MQ+
Sbjct: 62  ALGQDVNLDEVMIAAQKANITLTAATEFRNKAVEAYQEIMRMQM 105


>gi|220925379|ref|YP_002500681.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           nodulans ORS 2060]
 gi|219949986|gb|ACL60378.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           nodulans ORS 2060]
          Length = 100

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
            +  + S     +    F  LL     G      ++E   +A   GK ++ + V  + ++
Sbjct: 15  QNLGRLSPTRPAAPEGGFGQLLTAAVDGVAEAGRRSEQQMMAVGAGKANIVDVVTAVAES 74

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E  L   +A+RD+++SA  ++ +MQI
Sbjct: 75  ETALQTLVAVRDRVISAYEDIMRMQI 100


>gi|328543167|ref|YP_004303276.1| flagellar hook-basal body protein FliE [polymorphum gilvum
           SL003B-26A1]
 gi|326412913|gb|ADZ69976.1| Flagellar hook-basal body protein FliE [Polymorphum gilvum
           SL003B-26A1]
          Length = 100

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 44/94 (46%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
             +   M     + +  E  +S + F  L+++     +    + +  ++  +QGK  + +
Sbjct: 7   AANAYQMAARLARQAEAETPTSSVDFGGLVREAVNSVVEKGRETDQKTIGLVQGKADVVD 66

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            V  I + E  L   +++RD+++SA  E+ +M I
Sbjct: 67  VVTAIAETEVALETMVSVRDRVISAYEEIMRMPI 100


>gi|126665016|ref|ZP_01735999.1| flagellar hook-basal body complex protein (FliE) [Marinobacter sp.
           ELB17]
 gi|126630386|gb|EBA01001.1| flagellar hook-basal body complex protein (FliE) [Marinobacter sp.
           ELB17]
          Length = 122

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 31/104 (29%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
                         +R            +   SFS++L           + A ++  A  
Sbjct: 19  SQMTQNQQVEQNQSVRGRIDGPREVGETNGTASFSSMLGQAVGNVADAQKTAGDLRTAYD 78

Query: 67  QG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G     +   +    ++  +      +R++++ A  ++  M +
Sbjct: 79  MGEPNVDITRVMIAAQKSSVSFEALTQVRNRVVKAYEDIMNMPV 122


>gi|312879582|ref|ZP_07739382.1| flagellar hook-basal body complex subunit FliE [Aminomonas
           paucivorans DSM 12260]
 gi|310782873|gb|EFQ23271.1| flagellar hook-basal body complex subunit FliE [Aminomonas
           paucivorans DSM 12260]
          Length = 105

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
              Q      G+  + F  +L++  K      + A+ +      G    + E    + +A
Sbjct: 20  SPAQQEKAGEGTPSVPFEDVLKNSMKQVNALHQGADKMVQKLSLGDVEDVSEVSIAVEKA 79

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E  L   + +R+K++ A  ++++M +
Sbjct: 80  EMALRTLVEVRNKLVDAYQQIARMPV 105


>gi|330828798|ref|YP_004391750.1| flagellar hook-basal body protein [Aeromonas veronii B565]
 gi|328803934|gb|AEB49133.1| Flagellar hook-basal body protein [Aeromonas veronii B565]
          Length = 97

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 27/88 (30%), Gaps = 2/88 (2%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIM 80
                   + G      F  LLQ            A ++      G     + E +    
Sbjct: 10  EAGATPLAQPGRQVTSDFGLLLQQALGNVNELQGAANDLRTRFDMGDKSVDLAEVMIAGQ 69

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++      ++ +R+K++ A   +  M +
Sbjct: 70  KSSIAFEATVQVRNKMVDAYKTIMNMPV 97


>gi|15612530|ref|NP_224183.1| flagellar hook-basal body protein FliE [Helicobacter pylori J99]
 gi|15646164|ref|NP_208348.1| flagellar hook-basal body protein FliE [Helicobacter pylori 26695]
 gi|108563931|ref|YP_628247.1| flagellar hook-basal body protein FliE [Helicobacter pylori HPAG1]
 gi|188528349|ref|YP_001911036.1| flagellar hook-basal body protein FliE [Helicobacter pylori Shi470]
 gi|210135736|ref|YP_002302175.1| flagellar hook-basal body protein FliE [Helicobacter pylori P12]
 gi|217031710|ref|ZP_03437214.1| hypothetical protein HPB128_155g23 [Helicobacter pylori B128]
 gi|217033830|ref|ZP_03439255.1| hypothetical protein HP9810_877g34 [Helicobacter pylori 98-10]
 gi|298737154|ref|YP_003729684.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
           B8]
 gi|308185344|ref|YP_003929477.1| flagellar hook-basal body protein FliE [Helicobacter pylori SJM180]
 gi|54037113|sp|P67709|FLIE_HELPJ RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|54041064|sp|P67708|FLIE_HELPY RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|122386088|sp|Q1CR49|FLIE_HELPH RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704233|sp|B6JP67|FLIE_HELP2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704235|sp|B2UVX4|FLIE_HELPS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|2314740|gb|AAD08597.1| flagellar basal-body protein (fliE) [Helicobacter pylori 26695]
 gi|4156086|gb|AAD07039.1| FLAGELLAR HOOK-BASAL BODY COMPLEX PROTEIN [Helicobacter pylori J99]
 gi|107837704|gb|ABF85573.1| flagellar basal-body protein [Helicobacter pylori HPAG1]
 gi|188144589|gb|ACD49006.1| flagellar hook-basal body protein FliE [Helicobacter pylori Shi470]
 gi|210133704|gb|ACJ08695.1| flagellar hook-basal body protein FliE [Helicobacter pylori P12]
 gi|216943728|gb|EEC23171.1| hypothetical protein HP9810_877g34 [Helicobacter pylori 98-10]
 gi|216946557|gb|EEC25157.1| hypothetical protein HPB128_155g23 [Helicobacter pylori B128]
 gi|261838845|gb|ACX98611.1| flagellar basal-body protein [Helicobacter pylori 51]
 gi|261840250|gb|ACY00016.1| flagellar hook-basal body protein FliE [Helicobacter pylori 52]
 gi|298356348|emb|CBI67220.1| flagellar hook-basal body complex protein FliE [Helicobacter pylori
           B8]
 gi|308061264|gb|ADO03160.1| flagellar hook-basal body protein FliE [Helicobacter pylori SJM180]
 gi|308064339|gb|ADO06226.1| flagellar hook-basal body protein FliE [Helicobacter pylori Sat464]
 gi|317010249|gb|ADU80829.1| flagellar hook-basal body protein FliE [Helicobacter pylori India7]
 gi|317013371|gb|ADU83979.1| flagellar hook-basal body protein FliE [Helicobacter pylori
           Lithuania75]
 gi|317178280|dbj|BAJ56069.1| flagellar hook-basal body protein FliE [Helicobacter pylori F16]
 gi|317182783|dbj|BAJ60567.1| flagellar hook-basal body protein FliE [Helicobacter pylori F57]
          Length = 109

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|253996298|ref|YP_003048362.1| flagellar hook-basal body protein FliE [Methylotenera mobilis JLW8]
 gi|253982977|gb|ACT47835.1| flagellar hook-basal body complex subunit FliE [Methylotenera
           mobilis JLW8]
          Length = 118

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           IE +       +         +          +  + F+  L+          + AE + 
Sbjct: 11  IESMLAQMRAAAQRPQAESIANLASPIGANKSTGKVDFADALKASLDQVNQVQKSAETLG 70

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G    S+ + +    +A  +   +I +R+K++SA  ++  MQI
Sbjct: 71  KNFALGDDSVSLSDVMIAGQKANISFQATIQVRNKLVSAYQDIMSMQI 118


>gi|83594156|ref|YP_427908.1| flagellar hook-basal body protein FliE [Rhodospirillum rubrum ATCC
           11170]
 gi|83577070|gb|ABC23621.1| Flagellar hook-basal body complex protein FliE [Rhodospirillum
           rubrum ATCC 11170]
          Length = 106

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M ++     +++ S +   G         + +      SF+++++      I    + E 
Sbjct: 1   MAVDFASAVSAYKSASRIGGAEMTGGLLPSGQP--EGPSFASMVKGAIDDTITAGRQGEA 58

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            S  A++GK  +R+ V  +  AE TL   +A+RDK+++A   + +M I
Sbjct: 59  QSRLAIEGKADLRDVVMAVNNAESTLQTVVAVRDKVVNAYETILRMPI 106


>gi|242309758|ref|ZP_04808913.1| flagellar hook-basal body protein FliE [Helicobacter pullorum MIT
           98-5489]
 gi|239523759|gb|EEQ63625.1| flagellar hook-basal body protein FliE [Helicobacter pullorum MIT
           98-5489]
          Length = 105

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
           + N    SS  +F ++L+D         + +E V      G+   + +A   I +AE ++
Sbjct: 24  SPNNNANSSDKTFGSMLKDAFDEVNTHQKTSEQVMADMATGQIKDIHQAAIAIGKAENSM 83

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + +R+K +SA  E+ + QI
Sbjct: 84  KLMLEVRNKAISAYKELIRTQI 105


>gi|224826634|ref|ZP_03699735.1| flagellar hook-basal body complex subunit FliE [Lutiella
           nitroferrum 2002]
 gi|224601235|gb|EEG07417.1| flagellar hook-basal body complex subunit FliE [Lutiella
           nitroferrum 2002]
          Length = 105

 Score = 68.1 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 42/107 (39%), Gaps = 4/107 (3%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
              QG +  +                 +E  +S + F+ +L+   +      + ++ +  
Sbjct: 1   MSTQGIDQLLGELRASAALAAGKAPQPQE--TSQVDFADVLKSTIEQVNSAQQTSQEMQK 58

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++++ +  + +A  +    +  R+K++SA  E+   QI
Sbjct: 59  QFELGEEGVNLQDVMVSLQKASLSFQTMVQARNKLVSAYQEIMNTQI 105


>gi|311992335|gb|ADQ26741.1| rod MS-ring junction protein [Aeromonas hydrophila]
          Length = 104

 Score = 68.1 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             +S +     +           + G      F  LLQ            A ++      
Sbjct: 3   SASSLMQEMQAL-KVEAGATPLTQPGRQVTSDFGQLLQQALGNVNELQGAANDLRTRFDM 61

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + + +    ++      ++ +R+K++ A   +  M +
Sbjct: 62  GDNSVDLSQVMIAGQKSSIAFEATVQVRNKMVDAYKTIMNMPV 104


>gi|206890164|ref|YP_002248114.1| flagellar hook-basal body complex protein (FliE)
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742102|gb|ACI21159.1| flagellar hook-basal body complex protein (FliE)
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 97

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 49/92 (53%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
           +   +     Q+  E  G+   SF   L+D  K A    ++A+N   A  +G+ S+ + V
Sbjct: 6   NISELLGKSLQDLKELQGTQKESFEQALKDAIKEASQVEQEAQNAIEAFSKGELSIHQVV 65

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A+ TL   I +R+K+L+A  E+S+MQ+
Sbjct: 66  LAMEKADMTLQTLIQVRNKVLTAYEEISRMQV 97


>gi|195952551|ref|YP_002120841.1| flagellar hook-basal body complex subunit FliE [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195932163|gb|ACG56863.1| flagellar hook-basal body complex subunit FliE [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 101

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            ++ I     +    +      +       SF  +L +         + AE    A L+G
Sbjct: 1   MDNIIKSIPDLFGNVNNNTEKPKSQNQGAESFFDVLSNFLNYTNDVQQTAEATKKAILEG 60

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + +AV    +A   LNL + +R+K+L A   +   Q+
Sbjct: 61  ADIPLHDAVVQFDKAGVVLNLLVQVRNKLLDAYQTLINTQV 101


>gi|146277679|ref|YP_001167838.1| flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555920|gb|ABP70533.1| flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 107

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 3/109 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I  I G +  ++       +    +  +    +   +FS  L    +G      +A  
Sbjct: 1   MSINGISGASPLVALQGPSASQR--PEPVSSTDRAQAPAFSERLGSALEGLAKSQTEAAE 58

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A  +G+  ++ E +     +     L++ +R+K L A  ++  M +
Sbjct: 59  KASAFERGEGGNLAEVMVSQQVSSLGFQLALNVRNKALGAYRDIMNMPV 107


>gi|95929848|ref|ZP_01312589.1| flagellar hook-basal body complex protein (FliE) [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134144|gb|EAT15802.1| flagellar hook-basal body complex protein (FliE) [Desulfuromonas
           acetoxidans DSM 684]
          Length = 97

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           ++               + +  +    F+ +L +           A++     + GK   
Sbjct: 1   MNDISIDTHLKSMMPKLSFDKETPQSGFADMLTEAIDQTNKAQLDADSAVTDLVTGKADN 60

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + E +  + +A+ ++ + + +R+K++ A  E+ +MQ+
Sbjct: 61  LHEVMLSMEEADVSMRMLVQIRNKVVDAYKEIIQMQV 97


>gi|208435437|ref|YP_002267103.1| flagellar basal-body protein [Helicobacter pylori G27]
 gi|254780089|ref|YP_003058196.1| flagellar hook-basal body protein FliE [Helicobacter pylori B38]
 gi|308183712|ref|YP_003927839.1| flagellar hook-basal body protein FliE [Helicobacter pylori PeCan4]
 gi|226704234|sp|B5Z9I8|FLIE_HELPG RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|208433366|gb|ACI28237.1| flagellar basal-body protein [Helicobacter pylori G27]
 gi|254002002|emb|CAX30261.1| Flagellar hook-basal body complex protein FliE [Helicobacter pylori
           B38]
 gi|307638242|gb|ADN80692.1| Flagellar hook-basal body complex protein [Helicobacter pylori 908]
 gi|308065897|gb|ADO07789.1| flagellar hook-basal body protein FliE [Helicobacter pylori PeCan4]
 gi|317014992|gb|ADU82428.1| flagellar hook-basal body protein FliE [Helicobacter pylori
           Gambia94/24]
 gi|325996835|gb|ADZ52240.1| Flagellar hook-basal body complex protein [Helicobacter pylori
           2018]
 gi|325998427|gb|ADZ50635.1| Flagellar hook-basal body complex protein [Helicobacter pylori
           2017]
          Length = 109

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ N         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|33592503|ref|NP_880147.1| flagellar hook-basal body complex protein FliE [Bordetella
           pertussis Tohama I]
 gi|33572149|emb|CAE41693.1| flagellar hook-basal body complex protein FliE [Bordetella
           pertussis Tohama I]
 gi|332381921|gb|AEE66768.1| flagellar hook-basal body complex protein FliE [Bordetella
           pertussis CS]
          Length = 110

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +S    +         +  E    P  F+A LQ   +        A +
Sbjct: 1   MAVSGLSGIESMLSQMRAVVRAAQSGGATEAELAPGPSGFAAELQRSIRSVSQAQNAASD 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G    S+ + +  + +A      S+ +R+++++A  E+S M +
Sbjct: 61  QAKAFELGAPGISLNDVMIDLQKASLGFQTSVQVRNRLVAAYKEISSMAV 110


>gi|163750551|ref|ZP_02157789.1| flagellar hook-basal body complex protein FliE [Shewanella benthica
           KT99]
 gi|161329706|gb|EDQ00695.1| flagellar hook-basal body complex protein FliE [Shewanella benthica
           KT99]
          Length = 114

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
           +Q   S        G+   F    + +   +S   F  LL             A +++  
Sbjct: 9   LQEMQSLSGEIKPSGLNSGFGSPITQQVSNTSGSDFGQLLSQAIGSVGELQANAGSLATR 68

Query: 65  ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 69  LDMGDTRVTLSDTVIAREKASVAFEATMQVRNKLIEAYKEIMSMPV 114


>gi|237753203|ref|ZP_04583683.1| flagellar hook-basal body complex protein fliE [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229375470|gb|EEO25561.1| flagellar hook-basal body complex protein fliE [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 105

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
           + N++      SF ++L+D         +  E        G+   + +A   I +AE ++
Sbjct: 24  SPNQDLNPPTKSFGSMLKDAVDEVNTYQKTTEQAMADMATGQIKDLHQAAIVIGKAENSM 83

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + +R+K +SA  E+ K QI
Sbjct: 84  KLMLEVRNKAISAYKELIKTQI 105


>gi|296103641|ref|YP_003613787.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058100|gb|ADF62838.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 107

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 37/102 (36%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
               +    +   +     +  +       SFS +L +          +A++ +   + G
Sbjct: 6   MRGVLDQIQSQAQQVSGPSHRLQTSRGDAPSFSDVLFNSINEINKTQVEAKSKTQQWMSG 65

Query: 69  KTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + + +  + ++  + +  +  R+K++SA  E+    +
Sbjct: 66  SGDIALNDVMLAMQKSSISFSFGMQARNKMISAYQEIMNTPV 107


>gi|221215778|ref|ZP_03588737.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD1]
 gi|221164314|gb|EED96801.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD1]
          Length = 148

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS-----FSALLQDMAKGAIGDME 56
           M   + G  S +     +  +      S     +   +     F++ ++       GD +
Sbjct: 35  MTANVSGIGSVLQQMQAMAAQASGGVASPAAALAGSGAATAGTFASAMKASLDKISGDQQ 94

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A   + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 95  RALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 148


>gi|258621103|ref|ZP_05716137.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
           VM573]
 gi|258626176|ref|ZP_05721024.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
           VM603]
 gi|262166237|ref|ZP_06033974.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           VM223]
 gi|262170879|ref|ZP_06038557.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           MB-451]
 gi|258581531|gb|EEW06432.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
           VM603]
 gi|258586491|gb|EEW11206.1| Flagellar hook-basal body complex protein fliE [Vibrio mimicus
           VM573]
 gi|261891955|gb|EEY37941.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           MB-451]
 gi|262025953|gb|EEY44621.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           VM223]
          Length = 94

 Score = 67.7 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      F A+L +      G  + + ++ +   +G    S+ + 
Sbjct: 2   QAMMFEAMNTQPASTGQKVGADFGAMLNNAINNVNGLQKTSSDLQMRFDRGDEGVSLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94


>gi|254458858|ref|ZP_05072282.1| flagellar hook-basal body complex protein FliE [Campylobacterales
           bacterium GD 1]
 gi|207084624|gb|EDZ61912.1| flagellar hook-basal body complex protein FliE [Campylobacterales
           bacterium GD 1]
          Length = 102

 Score = 67.7 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
               +  +  N+  G+   +F+  L+          E +E        G+   + +A   
Sbjct: 13  TSTAELLKQKNKIDGAGGEAFADHLKSALNEVNDLQEISEKAIGDMATGQVKDLHQAALA 72

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           I +AE ++ L + +R+K L+A  E+ + Q+
Sbjct: 73  IGKAETSMKLMLEIRNKALNAYKELGRTQL 102


>gi|269796399|ref|YP_003315854.1| flagellar hook-basal body protein [Sanguibacter keddieii DSM 10542]
 gi|269098584|gb|ACZ23020.1| flagellar hook-basal body protein [Sanguibacter keddieii DSM 10542]
          Length = 114

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 1   MMIEQIQGTN----SFISHTDTIGMRYDFTQNSNEEGGSSPIS-FSALLQDMAKGAIGDM 55
           M I  I+G +      +S T  +       +     G S   S F  +L           
Sbjct: 1   MSIPAIEGVSLSGAGGVSPTGYLSSPDVIGRPEGASGVSGTSSAFGEVLTGAVGNLQSLQ 60

Query: 56  EKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           EK+  +++ A+ G    + +      +A+ TL L+ A+R+K + A SE+ +MQ
Sbjct: 61  EKSNALAVRAVTGDLDDIHDYTIASSEAKLTLELTAAVRNKAVEAFSEIMRMQ 113


>gi|103488414|ref|YP_617975.1| flagellar hook-basal body complex protein (FliE) [Sphingopyxis
           alaskensis RB2256]
 gi|98978491|gb|ABF54642.1| flagellar hook-basal body complex protein (FliE) [Sphingopyxis
           alaskensis RB2256]
          Length = 117

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   I   N  +      G           +G +    F A +    +       KA  +
Sbjct: 12  MRSSILNQNQALQ--RAAGRGGIDGGAGAVDGSAGAPDFGAAINHALQQVNAQQAKASEI 69

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S A  +G T  +   +    +A      ++ +R+K+LSA  ++  M +
Sbjct: 70  SEAYERGDTHDIVSVMIERQKASLGFETTLQVRNKLLSAYRDIMNMPV 117


>gi|113969624|ref|YP_733417.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           MR-4]
 gi|113884308|gb|ABI38360.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           MR-4]
          Length = 112

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M I          S    I   +  + N+   +   +S   F  LL        G    +
Sbjct: 1   MQIGTNSLLQEMQSLKGEIAPSFGISPNNIVQQVNNTSGADFGQLLSQAIGNVSGLQSTS 60

Query: 59  ENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            N++     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  SNLATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112


>gi|254973911|ref|ZP_05270383.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-66c26]
 gi|255091297|ref|ZP_05320775.1| flagellar hook-basal body protein FliE [Clostridium difficile CIP
           107932]
 gi|255312955|ref|ZP_05354538.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-76w55]
 gi|255515714|ref|ZP_05383390.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-97b34]
 gi|255648808|ref|ZP_05395710.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-37x79]
 gi|260682027|ref|YP_003213312.1| flagellar hook-basal body protein FliE [Clostridium difficile
           CD196]
 gi|260685625|ref|YP_003216758.1| flagellar hook-basal body protein FliE [Clostridium difficile
           R20291]
 gi|306518923|ref|ZP_07405270.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-32g58]
 gi|260208190|emb|CBA60526.1| flagellar hook-basal body complex protein [Clostridium difficile
           CD196]
 gi|260211641|emb|CBE01893.1| flagellar hook-basal body complex protein [Clostridium difficile
           R20291]
          Length = 105

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ +       +    T+           +F  ++ D           A+++  
Sbjct: 1   MPITQINNLMQGAKLDNLI-GETKPLTLNNKEEKKNFEDVIIDTIDKVNFQQVTADDMKE 59

Query: 64  AALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++G   SM E +    +A+ ++   I +R+KI  A  E++K+QI
Sbjct: 60  KFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI 105


>gi|317121814|ref|YP_004101817.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
           marianensis DSM 12885]
 gi|315591794|gb|ADU51090.1| flagellar hook-basal body complex subunit FliE [Thermaerobacter
           marianensis DSM 12885]
          Length = 122

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 29  SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLN 87
                G    SF   L    +   G   +A+ ++   L G    + + +    +A   + 
Sbjct: 42  PAGSSGGEGPSFLQELARALQQLEGTAGQADAMAQRLLTGDVQDLSQVMVATEKARLAIE 101

Query: 88  LSIALRDKILSAVSEVSKMQI 108
           L++ LR+K L A  E+ +M +
Sbjct: 102 LAVQLRNKALEAYQEIMRMPV 122


>gi|297380731|gb|ADI35618.1| flagellar hook-basal body complex protein (FliE) [Helicobacter
           pylori v225d]
 gi|308062840|gb|ADO04728.1| flagellar hook-basal body protein FliE [Helicobacter pylori Cuz20]
          Length = 109

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSINELNSTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|114777412|ref|ZP_01452409.1| hypothetical protein SPV1_13969 [Mariprofundus ferrooxydans PV-1]
 gi|114552194|gb|EAU54696.1| hypothetical protein SPV1_13969 [Mariprofundus ferrooxydans PV-1]
          Length = 101

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
           +     ++ +   +   +F+ALL    +    D + A++ +     GK  +  E +  I 
Sbjct: 14  QSAKISDAGKTTTAGSGNFAALLNSYTQQVNHDHKVADSAAQDLALGKGGNTSETLLAIQ 73

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A+ +  + + +R+K++ A  E+S+MQ+
Sbjct: 74  KADLSFQMMMGVRNKLVDAYREISRMQV 101


>gi|294140202|ref|YP_003556180.1| flagellar hook-basal body complex protein FliE [Shewanella violacea
           DSS12]
 gi|293326671|dbj|BAJ01402.1| flagellar hook-basal body complex protein FliE [Shewanella violacea
           DSS12]
          Length = 114

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
           +Q   S        G    F+   + +   +S   F  LL             + +++  
Sbjct: 9   LQEMQSLSGEIKPSGFNSGFSSPITQQVSNTSGSDFGQLLSQAIGTVGELQANSGSLASR 68

Query: 65  ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 69  LDMGDTRVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 114


>gi|78224305|ref|YP_386052.1| flagellar hook-basal body complex protein FliE [Geobacter
           metallireducens GS-15]
 gi|78195560|gb|ABB33327.1| Flagellar hook-basal body complex protein FliE [Geobacter
           metallireducens GS-15]
          Length = 101

 Score = 67.7 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+ I+           IG +     N   +             ++         ++++ 
Sbjct: 1   MIDGIESGIGLGQAFPEIGAKSAKPANMAGDA-------GKFFGELVSKVNELQSQSDSA 53

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             A   G++  + E +  + ++         +R+K + A +EV +MQ+
Sbjct: 54  VQALATGESQGLHEVMIAMEKSSLAFQFLGQVRNKAIDAYNEVMRMQV 101


>gi|332188585|ref|ZP_08390303.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
           S17]
 gi|332011369|gb|EGI53456.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
           S17]
          Length = 113

 Score = 67.7 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I  +    + +            T        +   +F+  L  +        E+ + V+
Sbjct: 6   ISNVMAIRAEVIARSRALREAQPTAPPGVTPTAPASTFADTLNAVVAKVNETQEQEDVVT 65

Query: 63  LAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A  +G+T  +        +A  T   ++ +R+K+LSA  ++  M I
Sbjct: 66  EAYERGETTDIATVALIQSRASITFEATLQVRNKLLSAYRDIMNMPI 112


>gi|296282267|ref|ZP_06860265.1| flagellar hook-basal body complex protein [Citromicrobium
           bathyomarinum JL354]
          Length = 121

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIM 80
           +      +  +       F+  L+    G      ++  ++ A  +G+ T + + +    
Sbjct: 34  QDKTAAPTEAQTAQDNGGFADSLRSALDGVNAAQTRSGEITAAYERGEETDIAKVMLARQ 93

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++      ++ +R+K+LSA  E+ +M +
Sbjct: 94  ESGVAFEATLQVRNKLLSAYQEIMRMGV 121


>gi|238028886|ref|YP_002913117.1| flagellar hook-basal body complex protein [Burkholderia glumae
           BGR1]
 gi|237878080|gb|ACR30413.1| Flagellar hook-basal body complex protein [Burkholderia glumae
           BGR1]
          Length = 112

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS---NEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M   + G  S +     +  +             G ++  SF+  L+            A
Sbjct: 1   MTAPVNGITSALQQMQAMAAQAAGGTPGVALAGNGAATASSFAGALKSSLDRISQAQVTA 60

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + A   G    S+ + +    +A   L   + +R+K++SA +++ +M +
Sbjct: 61  AGEAKAFELGAPNVSLNDVMIDGQKANIGLQFGLQVRNKLVSAYNDIMQMSV 112


>gi|117919789|ref|YP_868981.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           ANA-3]
 gi|117612121|gb|ABK47575.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           ANA-3]
          Length = 112

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M I          S    I   +  + N+   +   +S   F  LL        G    +
Sbjct: 1   MQIGANSLLQEMQSLQGEIKPSFGISPNNIVQQVNNTSGADFGQLLSQAIGNVSGLQSTS 60

Query: 59  ENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            N+S     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  SNLSTRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112


>gi|153011525|ref|YP_001372739.1| flagellar hook-basal body protein FliE [Ochrobactrum anthropi ATCC
           49188]
 gi|166214852|sp|A6X6Q6|FLIE_OCHA4 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|151563413|gb|ABS16910.1| flagellar hook-basal body complex protein FliE [Ochrobactrum
           anthropi ATCC 49188]
          Length = 111

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  I   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSISARNALSRLSETVAEKGVGSTSAPQAVPAAPGASFGEVLSQMTDSVGQKLQTAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|309388816|gb|ADO76696.1| flagellar hook-basal body complex subunit FliE [Halanaerobium
           praevalens DSM 2228]
          Length = 98

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSI 90
           E   S  +FS L +          + ++ V+ +   G+T  + + +    +A+  +NL+ 
Sbjct: 21  ENQKSSKAFSDLFKQKLSEVNQLQKDSQAVTASFAAGETDNIHDVMIAAEKAKIGVNLTT 80

Query: 91  ALRDKILSAVSEVSKMQI 108
           A++ K++ A +E+ ++Q+
Sbjct: 81  AVQTKVIDAYNEIMRLQV 98


>gi|307293803|ref|ZP_07573647.1| flagellar hook-basal body complex subunit FliE [Sphingobium
           chlorophenolicum L-1]
 gi|306879954|gb|EFN11171.1| flagellar hook-basal body complex subunit FliE [Sphingobium
           chlorophenolicum L-1]
          Length = 119

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ +      G            G ++P  F+  L+   +   G   +A   + 
Sbjct: 15  NAILQKNAALRDVAQTGNV-GVGSAVGTNGATAPGGFTDALKSALEQVNGLQNQAGEAAA 73

Query: 64  AALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  +G+T  +   +    QA  +   ++ +R+K+LSA  ++  M +
Sbjct: 74  SFERGETTDIAGVMLAKQQASVSFEATLQVRNKLLSAYKDIMSMPV 119


>gi|317181260|dbj|BAJ59046.1| flagellar hook-basal body protein FliE [Helicobacter pylori F32]
          Length = 109

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +S   E+ + QI
Sbjct: 87  MKLMLEVRNKAISTYKELLRTQI 109


>gi|254459856|ref|ZP_05073272.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
           bacterium HTCC2083]
 gi|206676445|gb|EDZ40932.1| flagellar hook-basal body complex protein FliE [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 77

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALR 93
               SF+  L+D           A  +      G +T + + +     +     L++ +R
Sbjct: 3   PDEPSFTDRLKDSLDSVANAQADAAQLVQDFETGKETDLTKVMVGQQVSSLGFQLTLNVR 62

Query: 94  DKILSAVSEVSKMQI 108
           +K LSA  ++  M +
Sbjct: 63  NKALSAYKDIINMPV 77


>gi|300311377|ref|YP_003775469.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1]
 gi|300074162|gb|ADJ63561.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1]
          Length = 118

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVD 77
           G+          E  +  + FS +L+          +KA  +S A   G    ++ + + 
Sbjct: 28  GVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVNDSQQKASKMSQAFAMGDDNVNLSDVMI 87

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +A  +   SI +R+K++SA  ++  MQ+
Sbjct: 88  ASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118


>gi|149377889|ref|ZP_01895618.1| flagellar hook-basal body complex protein (FliE) [Marinobacter
           algicola DG893]
 gi|149357831|gb|EDM46324.1| flagellar hook-basal body complex protein (FliE) [Marinobacter
           algicola DG893]
          Length = 122

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQA 82
               S  +  S    FS +L           + +  +  A   G     +   +    +A
Sbjct: 37  MDGPSKVQETSDTPKFSDMLSQAVGSVNELQQTSGEMKTAYEMGDPNMDISRVMIASEKA 96

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
             +      +R++++ A  ++  M +
Sbjct: 97  SISFEALTQVRNRVVKAYEDIMNMPV 122


>gi|291562019|emb|CBL40833.1| flagellar hook-basal body complex protein FliE [butyrate-producing
           bacterium SS3/4]
          Length = 105

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 4/108 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MIEQ+ G   FI+            +        +   F ++L+D  +      +  E  
Sbjct: 1   MIEQVNG---FITPMKGWDAVEKNDKKITGTENGTKSVFQSVLEDTVQNVYDTQKDVEQK 57

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 G+            +AE +L + I+LR+K + A +E+ KM +
Sbjct: 58  QYLLATGQLEDAHSLPIAQAKAELSLEVMISLRNKAMEAYNEILKMSV 105


>gi|71279432|ref|YP_268243.1| flagellar hook-basal body complex protein FliE [Colwellia
           psychrerythraea 34H]
 gi|71145172|gb|AAZ25645.1| flagellar hook-basal body complex protein FliE [Colwellia
           psychrerythraea 34H]
          Length = 120

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M    +Q   +     D + +      NS  +   S  +F  +L D  K       ++  
Sbjct: 12  MQNMSLQAMGNKPPAID-VDVINGTASNSVGKINESTSNFGDMLTDALKSVNDLQTESGE 70

Query: 61  VSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G ++  + E +    ++   L+ ++ +R+K + A  E+  M +
Sbjct: 71  KKRAFEMGDSNVTLAEVMIASSKSGIALDATVQIRNKFVEAYKEIMSMPV 120


>gi|256833242|ref|YP_003161969.1| flagellar hook-basal body complex subunit FliE [Jonesia
           denitrificans DSM 20603]
 gi|256686773|gb|ACV09666.1| flagellar hook-basal body complex subunit FliE [Jonesia
           denitrificans DSM 20603]
          Length = 110

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIG-MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I  I    S       +              G  S  +F  +L +      G  EK++
Sbjct: 1   MSIPAIGALTSATDPNALMAVTSTGLITPPAGGGTVSDSTFGQMLTNSIDNLQGLQEKSQ 60

Query: 60  NVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            +++ A+ G    + +      +A+ TL L+ A+R+K + A +E+ +MQ
Sbjct: 61  GLAVQAVTGDLDDIHDYTIASTEAKVTLELTAAIRNKAVDAFNEIMRMQ 109


>gi|114046854|ref|YP_737404.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           MR-7]
 gi|113888296|gb|ABI42347.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           MR-7]
          Length = 112

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M I          S    I   +  + N+   +   +S   F  LL        G    +
Sbjct: 1   MQIGANSLLQEMQSLQGEIKPSFGISPNNIVQQVNNTSGADFGQLLSQAIGNVSGLQSTS 60

Query: 59  ENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            N++     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  SNLATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 112


>gi|301168114|emb|CBW27700.1| flagellar hook-basal body complex protein fliE [Bacteriovorax
           marinus SJ]
          Length = 121

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREA 75
               + ++     + EG  +  SF  +L        G  ++A         G+  ++ E 
Sbjct: 29  GAKAINFNELSIGDVEGTQAKQSFGEMLASSIAQVNGLQQEANTAMQKLASGEKKNLPEV 88

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  + +A+        +R K++ A  EV +MQI
Sbjct: 89  MMAVEKADIAFRTMNQIRTKVIDAYKEVMRMQI 121


>gi|254521105|ref|ZP_05133160.1| flagellar hook-basal body complex protein FliE [Stenotrophomonas
           sp. SKA14]
 gi|219718696|gb|EED37221.1| flagellar hook-basal body complex protein FliE [Stenotrophomonas
           sp. SKA14]
          Length = 122

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 2/103 (1%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
           G ++ ++                +     P SF+  L+    G     +K+  ++ A   
Sbjct: 20  GQSAALNPLAEAPRSNALPGTVLDAPQVQPASFTETLRGAIAGVNDAQQKSGALAKAFEM 79

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + + +    Q++     ++ +R++++ A  +V  M +
Sbjct: 80  GDPSADLAKVMVASQQSQIAFRATVEVRNRLVQAYQDVMNMPL 122


>gi|283853240|ref|ZP_06370491.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio sp.
           FW1012B]
 gi|283571345|gb|EFC19354.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio sp.
           FW1012B]
          Length = 108

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I  I   +++ +     G        S  +  +    F  +L D  K          +
Sbjct: 1   MAIPPI-ALSAYQNAMARTGAIDSKVSRSLAKPAAPAEGFGNMLTDSLKNVNDLQNTKSD 59

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           +  +   G+T ++ E + ++ +A   + ++ A+R K+L A  E+ KMQ
Sbjct: 60  MVQSFASGETQNVHELMINLQKAGVAMQMTTAVRGKVLEAYRELVKMQ 107


>gi|294084402|ref|YP_003551160.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663975|gb|ADE39076.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 103

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +       S+  ++  +    +            FS  + D  K      + A  ++ A 
Sbjct: 1   MTSIGPVGSNISSLHAQV-LKRADTALSKEPDNGFSDRIGDALKSVADTQKNAAELTKAY 59

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G +  + + + +   +     +++ +R+K+LSA  ++  M +
Sbjct: 60  EMGTENDLTKVMVNQQVSSLGFQMTLNVRNKVLSAYKDIMNMPV 103


>gi|332994122|gb|AEF04177.1| Flagellar hook-basal body protein [Alteromonas sp. SN2]
          Length = 109

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M  +       +                + E   S   FS +L+    G  G   +++++
Sbjct: 1   MDVKANSLYQEMQSMIGQTRMPANELQPSNEINPSANEFSTMLKQAVDGVNGMQLESKDL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 G    S+ E +    +A      ++ +R+K+L A   +  M +
Sbjct: 61  QQRFEMGDKSLSLAEVMLTKEKAGIAFEATVQVRNKVLEAYKTIMNMPV 109


>gi|330721829|gb|EGG99802.1| Flagellar hook-basal body complex protein FliE [gamma
           proteobacterium IMCC2047]
          Length = 118

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q++   +            +          +    F  +L D   G     +KA  ++
Sbjct: 11  LMQMRDMQAQAQGQVNKPAELNREMGVQGADKTEGPGFGEMLSDAVNGVNDAQKKAGALA 70

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A  QG     + + +  + +A  +      +R++++SA   V KM +
Sbjct: 71  TAYEQGDPNVDLTQVMISMQKASVSFQAMTQVRNRLVSAYETVMKMPV 118


>gi|253688951|ref|YP_003018141.1| flagellar hook-basal body complex subunit FliE [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259646002|sp|C6D978|FLIE_PECCP RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|251755529|gb|ACT13605.1| flagellar hook-basal body complex subunit FliE [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 104

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG +  +       ++      +     S    F++ L+          + A   + 
Sbjct: 1   MSVQGIDGVLQQMQVKALQASG---TPIARPSVEPGFASELKAAIDKISDTQQTARTQAE 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  ++ + I +R+K++SA  EV  M +
Sbjct: 58  KFTLGVPGVALNDVMVDLQKSSISMQMGIQVRNKLVSAYQEVMNMSV 104


>gi|294013070|ref|YP_003546530.1| flagellar hook-basal body protein FliE [Sphingobium japonicum
           UT26S]
 gi|292676400|dbj|BAI97918.1| flagellar hook-basal body protein FliE [Sphingobium japonicum
           UT26S]
          Length = 119

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ +      G            G ++P  F+  L+   +   G   +A   + 
Sbjct: 15  NAILQKNAALRDVAQTGNV-GAGSAVGTNGATAPGGFTDALKSALEQVNGLQNQAGEAAA 73

Query: 64  AALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  +G+T  +   +    QA  +   ++ +R+K+LSA  ++  M +
Sbjct: 74  SFERGETTDIAGVMLAKQQASVSFEATLQVRNKLLSAYKDIMSMPV 119


>gi|224417696|ref|ZP_03655702.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
           98-5491]
 gi|253827045|ref|ZP_04869930.1| flagellar basal body protein [Helicobacter canadensis MIT 98-5491]
 gi|313141239|ref|ZP_07803432.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
           98-5491]
 gi|253510451|gb|EES89110.1| flagellar basal body protein [Helicobacter canadensis MIT 98-5491]
 gi|313130270|gb|EFR47887.1| flagellar hook-basal body protein FliE [Helicobacter canadensis MIT
           98-5491]
          Length = 105

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
               SF  +L+D  +      +  E        G+   + +A   I +AE ++ L + +R
Sbjct: 31  PPNKSFENMLKDAFEEVNEHQKTTEQAMADMATGQIKDIHQAAIAIGKAENSMKLMLEVR 90

Query: 94  DKILSAVSEVSKMQI 108
           +K +SA  E+ + QI
Sbjct: 91  NKAISAYKELIRTQI 105


>gi|307718597|ref|YP_003874129.1| flagellar hook-basal body complex protein FliE [Spirochaeta
           thermophila DSM 6192]
 gi|306532322|gb|ADN01856.1| flagellar hook-basal body complex protein FliE [Spirochaeta
           thermophila DSM 6192]
          Length = 108

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLN 87
            EE    P  FS LL +   G     +K+  +S   +         +    + +A   L+
Sbjct: 29  PEEKPVDPDDFSRLLFEALDGVNSLQQKSALLSQQMITDPDSLDPHDVTIAMAKANLALS 88

Query: 88  LSIALRDKILSAVSEVSKM 106
           ++ ++ D+ + A  E+  +
Sbjct: 89  ITKSVVDRAVQAYREILSL 107


>gi|221636058|ref|YP_002523934.1| flagellar hook-basal body complex protein FliE [Thermomicrobium
           roseum DSM 5159]
 gi|221157476|gb|ACM06594.1| flagellar hook-basal body complex protein FliE [Thermomicrobium
           roseum DSM 5159]
          Length = 99

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTS 71
           I+    I         +     ++  SF A+L+         + +A+ ++LA   G    
Sbjct: 3   IAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGEDVD 62

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + E +  +  A   L  ++ +R++ L A  EV  M I
Sbjct: 63  LHEVMLALETASIGLQAALQIRNRALEAYREVMSMPI 99


>gi|116246261|ref|XP_001230417.1| Anopheles gambiae str. PEST AGAP012889-PA [Anopheles gambiae str.
           PEST]
 gi|116133285|gb|EAU77928.1| AGAP012889-PA [Anopheles gambiae str. PEST]
          Length = 141

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQ--GTNSFISHTDTIGMRYDFTQNSNEEGGSSP--ISFSALLQDMAKGAIGDME 56
           +MI  I     ++  ++  T          +     S+    SFS +L D  K A+   +
Sbjct: 30  LMISDITTRSFDALNAYGQTQRTLQGALNPAEAAEPSNDSVTSFSNVLGDALKNAVHVGK 89

Query: 57  KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            AE  +   L G   M +    + +A+ TL     +RD+ + A  ++ KM I
Sbjct: 90  TAETQAATGLSGGGDMTDIATSVAEAKLTLQTVTTVRDRFVQAYQDIMKMSI 141


>gi|157738154|ref|YP_001490838.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
 gi|315636297|ref|ZP_07891547.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
 gi|157700008|gb|ABV68168.1| flagellar hook-basal body protein FliE [Arcobacter butzleri RM4018]
 gi|315479386|gb|EFU70069.1| flagellar hook-basal body protein FliE [Arcobacter butzleri JV22]
          Length = 106

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI  I   NS   +   I +        ++    +  SF  LL            K  + 
Sbjct: 1   MIGTINSLNSL--NPLKINLNAVQETQPDDNNELAGKSFQELLDGAVNDVNSTQIKGYDS 58

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 GK  +++EAV  I +AE T+ L++ +++K ++A  EV +MQ+
Sbjct: 59  MKEIATGKVVNLQEAVQKIEEAELTMKLALEVKNKAINAYREVMRMQV 106


>gi|117618842|ref|YP_855903.1| flagellar hook-basal body complex protein FliE [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560249|gb|ABK37197.1| flagellar hook-basal body complex protein FliE [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 105

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             +S +     +           + G      F  LLQ            A ++      
Sbjct: 4   SASSLMQEMQAL-KVEAGATPLTQPGRQVTSDFGQLLQQALGNVNELQGAANDLRTRFDM 62

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + + +    ++      ++ +R+K++ A   +  M +
Sbjct: 63  GDNSVDLSQVMIAGQKSSIAFEATVQVRNKMVDAYKTIMNMPV 105


>gi|292669733|ref|ZP_06603159.1| flagellar hook-basal body complex protein FliE [Selenomonas noxia
           ATCC 43541]
 gi|292648530|gb|EFF66502.1| flagellar hook-basal body complex protein FliE [Selenomonas noxia
           ATCC 43541]
          Length = 102

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
             +            SF   L+D           ++  +     G+   + + V    +A
Sbjct: 17  AVSHLGETIEKPEEKSFGTYLKDALSEVNQLQLASDEQNKLLAAGEVSDISQVVVAGQKA 76

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E  L L++ LR++ +SA  E+ +MQ+
Sbjct: 77  EIALQLTLQLRNRAVSAYQEIMRMQV 102


>gi|187926898|ref|YP_001893243.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12J]
 gi|241665227|ref|YP_002983586.1| flagellar hook-basal body protein FliE [Ralstonia pickettii 12D]
 gi|187728652|gb|ACD29816.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12J]
 gi|240867254|gb|ACS64914.1| flagellar hook-basal body complex subunit FliE [Ralstonia pickettii
           12D]
          Length = 111

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISH-TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I       S ++              ++        + F ++L+          +KAE
Sbjct: 1   MDITNANSVVSLMNSVLAPSSQVGGIGGSTGGADSKVSVDFGSVLKSSLDRVDASQQKAE 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            VS +   G     + + +  + +A   L  ++ +R+K++SA   +  M I
Sbjct: 61  AVSRSFEMGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSAYQNIMSMSI 111


>gi|91200220|emb|CAJ73264.1| similar to lateral flagellar FliE-like hook basal body protein
           [Candidatus Kuenenia stuttgartiensis]
          Length = 113

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNL 88
           +++      SF                K  +       GK  ++ E +  + +AE +   
Sbjct: 34  SKKQTDKGTSFQDAFGSFFNEINELQTKTNDSIEHLSSGKVENIHEVMVAMSKAEVSFKY 93

Query: 89  SIALRDKILSAVSEVSKMQ 107
            +  R+K++   +EV K Q
Sbjct: 94  MMEARNKLVKTYTEVMKEQ 112


>gi|86146137|ref|ZP_01064463.1| flagellar hook-basal body protein [Vibrio sp. MED222]
 gi|218708822|ref|YP_002416443.1| flagellar hook-basal body protein FliE [Vibrio splendidus LGP32]
 gi|85836084|gb|EAQ54216.1| flagellar hook-basal body protein [Vibrio sp. MED222]
 gi|218321841|emb|CAV17814.1| Flagellar hook-basal body complex protein fliE [Vibrio splendidus
           LGP32]
          Length = 103

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M    +      G +    F  +L +         + + N+      G    S+ + 
Sbjct: 11  QAMMVEAASTRPAATGQAVGADFGNMLTNAINNVNSLQKTSGNLQTRFDSGDQSVSLSDV 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ +  E+  M +
Sbjct: 71  MIARNKSSVAFEATIQIRNKLVESYKELMNMPV 103


>gi|295097227|emb|CBK86317.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 85

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREAVDHIMQAER 84
             +      +  SFS +L +           A+ ++   + G +   + + +  + ++  
Sbjct: 2   SRNQPTALKNTPSFSDILFNSINEINETQVNAKEMTQQWMSGSSDIGLNDVMLAMQKSSI 61

Query: 85  TLNLSIALRDKILSAVSEVSKMQI 108
           + +  +  R+K+LSA  E+    +
Sbjct: 62  SFSFGVQARNKMLSAYQEIMNTPV 85


>gi|88858109|ref|ZP_01132751.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas
           tunicata D2]
 gi|88819726|gb|EAR29539.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas
           tunicata D2]
          Length = 107

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 3/102 (2%)

Query: 10  NSFISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
           NS +    +I M      ++      SS   FS+LL++         + A+    A   G
Sbjct: 6   NSLLQEMQSIAMEAGQNVSNRLPTAPSSSADFSSLLRNAIDTVSELQQDAKTKVTAVEMG 65

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ EA+    ++      ++ +R+K++ A  ++  M +
Sbjct: 66  DRRVSLAEAMIASEKSSVAFEATVQVRNKLVEAYKDIMNMPV 107


>gi|330808214|ref|YP_004352676.1| flagellar hook-basal body protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376322|gb|AEA67672.1| flagellar hook-basal body protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 108

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N  +     + M       S         SFS +L           + +  ++ A   G
Sbjct: 7   FNRLMLDMRAMQMDAMAQPKSVAVPQVGGSSFSDMLGQAVNKVNDTQQASNQLASAFEIG 66

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 67  KSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 108


>gi|325288777|ref|YP_004264958.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324964178|gb|ADY54957.1| Flagellar hook-basal body complex protein fliE [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 107

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +    +    T    +      +S      +   FSA LQ+          +A    
Sbjct: 1   MSGLVPITAISPLTPLQSIEPMRGGDSASVQFGNSSDFSAFLQNAVDNLEQTQSEASVAV 60

Query: 63  LAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G        V  + +A  +L+L++ +R+KIL A  E+ +MQI
Sbjct: 61  EGLTTGAISDFHVPVIALQKAALSLDLTVNVRNKILDAYHEIMRMQI 107


>gi|116696303|ref|YP_841879.1| flagellar hook-basal body complex protein [Ralstonia eutropha H16]
 gi|113530802|emb|CAJ97149.1| flagellar hook-basal body complex protein [Ralstonia eutropha H16]
          Length = 115

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  I      +     +         S          F+  LQ          E+A   +
Sbjct: 9   MTTISSIEGMLQQLRGMSQVASGNSASQSAAPVGG-GFAGELQRSLGRINAAQERAYGQA 67

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   GK   ++ + +  + +A  +    + +R+++++A  E+  M +
Sbjct: 68  EAFELGKPGVALNDVMIDLQKANVSFQTGVQVRNRLVAAYQEMMNMAV 115


>gi|209695740|ref|YP_002263670.1| flagellar hook-basal body protein FliE [Aliivibrio salmonicida
           LFI1238]
 gi|208009693|emb|CAQ79993.1| flagellar hook-basal body complex protein FliE [Aliivibrio
           salmonicida LFI1238]
          Length = 103

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      FSA+         G  + + ++++   +G    S+ + 
Sbjct: 11  QAMMLDATNTTRPATGKEVGADFSAMFAKAVNNVNGLQQASSDLAVRFDRGDEGVSLSDV 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++    + +I +R+K++ A   +  M +
Sbjct: 71  MIARNKSSVAFDATIQVRNKLVDAYKTLMNMPV 103


>gi|221201941|ref|ZP_03574978.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD2M]
 gi|221178361|gb|EEE10771.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD2M]
          Length = 148

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS-----FSALLQDMAKGAIGDME 56
           M   + G  S +     +  +      S     +   +     F++ ++       GD +
Sbjct: 35  MTVNVSGIGSVLQQMQAMAAQASGGVASPAAALAGSGAATAGTFASAMKASLDKISGDQQ 94

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A   + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 95  RALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 148


>gi|261209870|ref|ZP_05924171.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC341]
 gi|260841056|gb|EEX67581.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC341]
          Length = 94

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      FSA+L +      G  + + ++ +   +G    S+ + 
Sbjct: 2   QAMMFEAMNTQPASTGQKVGADFSAMLNNAINNVNGLQKTSSDLQMRFDRGDEGVSLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94


>gi|229507781|ref|ZP_04397286.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae BX
           330286]
 gi|229511982|ref|ZP_04401461.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           B33]
 gi|229513785|ref|ZP_04403247.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae TMA
           21]
 gi|229519118|ref|ZP_04408561.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           RC9]
 gi|229522087|ref|ZP_04411504.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae TM
           11079-80]
 gi|229524135|ref|ZP_04413540.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae bv.
           albensis VL426]
 gi|229528854|ref|ZP_04418244.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           12129(1)]
 gi|229607326|ref|YP_002877974.1| flagellar hook-basal body protein FliE [Vibrio cholerae MJ-1236]
 gi|229332628|gb|EEN98114.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           12129(1)]
 gi|229337716|gb|EEO02733.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae bv.
           albensis VL426]
 gi|229341012|gb|EEO06017.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae TM
           11079-80]
 gi|229343807|gb|EEO08782.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           RC9]
 gi|229348966|gb|EEO13923.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae TMA
           21]
 gi|229351947|gb|EEO16888.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           B33]
 gi|229355286|gb|EEO20207.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae BX
           330286]
 gi|229369981|gb|ACQ60404.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MJ-1236]
          Length = 94

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      F A+L        G  + + ++     +G    S+ + 
Sbjct: 2   QAMMFEAMNTQPASTGQKVGADFGAMLTKAINNVNGLQKTSSDMQTRFDRGDEGISLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 94


>gi|167630288|ref|YP_001680787.1| flagellar hook-basal body complex protein flie, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167593028|gb|ABZ84776.1| flagellar hook-basal body complex protein flie, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 87

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 37  PISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDK 95
           P SFSA LQD         ++A+  +     GK   + + V    +A     L++ +R+K
Sbjct: 15  PKSFSAFLQDALNHVNDLHKQADAAAAELAAGKAIDLHQVVIASEKAGIATQLTLQVRNK 74

Query: 96  ILSAVSEVSKMQI 108
           ++ A  E+ +MQ+
Sbjct: 75  VMEAYQEIMRMQV 87


>gi|212709513|ref|ZP_03317641.1| hypothetical protein PROVALCAL_00555 [Providencia alcalifaciens DSM
           30120]
 gi|212687851|gb|EEB47379.1| hypothetical protein PROVALCAL_00555 [Providencia alcalifaciens DSM
           30120]
          Length = 103

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ     +S  + +  +  +    N +    P+ F+  L            ++     
Sbjct: 1   MTIQAIEGVVSQLNVVATQAAY----NTKPVVEPVGFADHLVASVNQINETRVQSAQKVQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + ++  +L + I +R+K++SA  E+  M +
Sbjct: 57  DFTLGKPDVSLNDVMVDMQKSSLSLQMGIQVRNKLVSAYQEIMSMPV 103


>gi|261252321|ref|ZP_05944894.1| flagellar hook-basal body complex protein FliE [Vibrio orientalis
           CIP 102891]
 gi|260935712|gb|EEX91701.1| flagellar hook-basal body complex protein FliE [Vibrio orientalis
           CIP 102891]
          Length = 94

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREA 75
              M           G +    F  LL +         + + N+ +   +G     + + 
Sbjct: 2   QAMMFEAGGTKPAATGQTVGADFGQLLNNAINNVNSLSKASSNMQMRFDRGDADVSLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ +  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVESYKELMNMPV 94


>gi|85711043|ref|ZP_01042103.1| Flagellar hook-basal body protein [Idiomarina baltica OS145]
 gi|85694956|gb|EAQ32894.1| Flagellar hook-basal body protein [Idiomarina baltica OS145]
          Length = 111

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 37/96 (38%), Gaps = 2/96 (2%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSM 72
            T +  +      N+ +   S+   FS LL+          + + ++      G    ++
Sbjct: 16  TTQSANLDKPQNDNALKVENSANADFSNLLKMAVDNVNELQQTSGDLKTRMELGDPNVTL 75

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +    +A      ++ +R+K++ A  E+  M +
Sbjct: 76  EQTMIASQKASIAFEATVQVRNKMVEAYKEIMSMPV 111


>gi|121586773|ref|ZP_01676555.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           2740-80]
 gi|121727197|ref|ZP_01680364.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           V52]
 gi|147675704|ref|YP_001217657.1| flagellar hook-basal body protein FliE [Vibrio cholerae O395]
 gi|153213273|ref|ZP_01948685.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           1587]
 gi|153801634|ref|ZP_01956220.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MZO-3]
 gi|153818994|ref|ZP_01971661.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           NCTC 8457]
 gi|153825596|ref|ZP_01978263.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MZO-2]
 gi|153828648|ref|ZP_01981315.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           623-39]
 gi|227082259|ref|YP_002810810.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           M66-2]
 gi|254291371|ref|ZP_04962164.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           AM-19226]
 gi|254849220|ref|ZP_05238570.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MO10]
 gi|297582032|ref|ZP_06943951.1| flagellar hook-basal body protein FliE [Vibrio cholerae RC385]
 gi|298497844|ref|ZP_07007651.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae MAK
           757]
 gi|9656685|gb|AAF95279.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548940|gb|EAX58979.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           2740-80]
 gi|121630442|gb|EAX62835.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           V52]
 gi|124116073|gb|EAY34893.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           1587]
 gi|124122811|gb|EAY41554.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MZO-3]
 gi|126510489|gb|EAZ73083.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           NCTC 8457]
 gi|146317587|gb|ABQ22126.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           O395]
 gi|148875919|gb|EDL74054.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           623-39]
 gi|149740747|gb|EDM54846.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MZO-2]
 gi|150422701|gb|EDN14655.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           AM-19226]
 gi|227010147|gb|ACP06359.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           M66-2]
 gi|227014030|gb|ACP10240.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           O395]
 gi|254844925|gb|EET23339.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae
           MO10]
 gi|297533727|gb|EFH72569.1| flagellar hook-basal body protein FliE [Vibrio cholerae RC385]
 gi|297542177|gb|EFH78227.1| flagellar hook-basal body complex protein FliE [Vibrio cholerae MAK
           757]
          Length = 109

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M  E     +   +    +      TQ ++  G      F A+L        G  + + +
Sbjct: 1   MASEVAMRLDGLNNEMQAMMFEAMNTQPAST-GQKVGADFGAMLTKAINNVNGLQKTSSD 59

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +     +G    S+ + +    ++      +I +R+K++ A  E+  M +
Sbjct: 60  MQTRFDRGDEGISLSDVMIARNKSSVAFEATIQVRNKLVEAYKELMNMPV 109


>gi|255099414|ref|ZP_05328391.1| flagellar hook-basal body protein FliE [Clostridium difficile
           QCD-63q42]
          Length = 104

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 3/106 (2%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I   N+ +       +                 +F  ++ D           A+++  
Sbjct: 1   MPITQINNLMQGAKLDNLI--GETKPLTLNKEEKKNFEDVIIDTIDKVNFQQVTADDMKE 58

Query: 64  AALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++G   SM E +    +A+ ++   I +R+KI  A  E++K+QI
Sbjct: 59  KFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI 104


>gi|313200542|ref|YP_004039200.1| flagellar hook-basal body complex subunit flie [Methylovorus sp.
           MP688]
 gi|312439858|gb|ADQ83964.1| flagellar hook-basal body complex subunit FliE [Methylovorus sp.
           MP688]
          Length = 104

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--T 70
            +           T  ++    +  + F+  L+           +AE +      G    
Sbjct: 7   AATQKPAMAPVAETTPASNTQSTPKVDFAETLKASLNQVNQSQLEAERLGKNFAMGDDSV 66

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+ + +    +A  +   ++ +R+K++SA  ++  MQ+
Sbjct: 67  SLSDVMIAGQKANISFQATLQVRNKLVSAYQDIMNMQV 104


>gi|269792947|ref|YP_003317851.1| flagellar hook-basal body complex subunit FliE [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100582|gb|ACZ19569.1| flagellar hook-basal body complex subunit FliE [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 100

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
           F  +L+   +        A+ +      G+   + +    + +AE  L   + +R+K++ 
Sbjct: 31  FEEVLRSSLRSVNSLQMGADQIVQRLALGEVEDVSQVSIAVEKAELALRTLVEIRNKLVD 90

Query: 99  AVSEVSKMQI 108
           A  ++S+M +
Sbjct: 91  AYQQISRMPV 100


>gi|109948139|ref|YP_665367.1| flagellar hook-basal body protein FliE [Helicobacter acinonychis
           str. Sheeba]
 gi|123362497|sp|Q17VF8|FLIE_HELAH RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|109715360|emb|CAK00368.1| fliE [Helicobacter acinonychis str. Sheeba]
          Length = 109

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++ +         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESGSTFKEQKGGEFSKLLKQSISELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|315186390|gb|EFU20150.1| flagellar hook-basal body complex subunit FliE [Spirochaeta
           thermophila DSM 6578]
          Length = 108

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLN 87
            EE    P  FS LL +   G     +K+  +S   +         +    + +A   L+
Sbjct: 29  PEEKPVDPDDFSRLLFEALDGVNSLQQKSALLSQQMITDPDSLDPHDVTIAMAKANLALS 88

Query: 88  LSIALRDKILSAVSEVSKM 106
           ++ ++ D+ + A  E+  +
Sbjct: 89  ITKSVVDRAVQAYREILSL 107


>gi|50120660|ref|YP_049827.1| flagellar hook-basal body protein FliE [Pectobacterium atrosepticum
           SCRI1043]
 gi|81645430|sp|Q6D6F8|FLIE_ERWCT RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|49611186|emb|CAG74632.1| flagellar hook-basal body complex protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 104

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG +  +       ++     ++     S    F++ L+          + A   + 
Sbjct: 1   MSVQGIDGVLQQMQVKALQAS---DTPIARPSVEPGFASELKAAIDKISDTQQVARTQAE 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  ++ + I +R+K++SA  EV  M +
Sbjct: 58  KFTLGVPGVALNDVMVDLQKSSISMQMGIQVRNKLVSAYQEVMNMSV 104


>gi|317129210|ref|YP_004095492.1| flagellar hook-basal body complex subunit FliE [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474158|gb|ADU30761.1| flagellar hook-basal body complex subunit FliE [Bacillus
           cellulosilyticus DSM 2522]
          Length = 102

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
           M+   T   + +   +  SF  +L +  +        ++ ++   ++G    + + +   
Sbjct: 14  MKPQQTMKPDIKPYEAQDSFKKMLSNAIQNTNDAQVNSQMMTERLVRGENVDLHDVLITA 73

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  TL  ++ +R+K + A  E+ +MQ+
Sbjct: 74  EKASVTLQTTVEIRNKAIEAYQEIMRMQV 102


>gi|328958285|ref|YP_004375671.1| flagellar hook-basal body protein FliE [Carnobacterium sp. 17-4]
 gi|328674609|gb|AEB30655.1| flagellar hook-basal body protein FliE [Carnobacterium sp. 17-4]
          Length = 106

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDH 78
                       E  +   SFS +L++           A+      + G T  +   +  
Sbjct: 17  TALTGGLNEQPTEAANGLSSFSGMLENAMSSLNEQQVTADQGVQDLITGNTDNLHNVMIQ 76

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQ 107
             +A+ +L L++ LR+K L A +E+  MQ
Sbjct: 77  TSEAQLSLELALQLRNKGLEAYNEIKNMQ 105


>gi|315452790|ref|YP_004073060.1| putative flagellar hook-basal body complex protein [Helicobacter
           felis ATCC 49179]
 gi|315131842|emb|CBY82470.1| putative flagellar hook-basal body complex protein [Helicobacter
           felis ATCC 49179]
          Length = 100

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAV 76
            +        +   E       FSA+L+          ++++        G+   + +A 
Sbjct: 9   GLNKASTPLDSKAHENLMEKGEFSAMLKHSIDELNNTQKESDKALADMATGQVKDLHQAA 68

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             I +AE ++ L + +R+K +SA  E+ + QI
Sbjct: 69  IAIGKAETSMKLMLEVRNKAISAYKELLRTQI 100


>gi|24213045|ref|NP_710526.1| flagellar hook-basal body protein FliE [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45656201|ref|YP_000287.1| flagellar hook-basal body protein FliE [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|38503023|sp|Q8F952|FLIE_LEPIN RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|73919364|sp|Q72VK0|FLIE_LEPIC RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|24193736|gb|AAN47544.1| flagellar hook-basal body protein FliE [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45599435|gb|AAS68924.1| flagellar hook-basal body complex protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 127

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERT 85
                      SFS  +++          +A+ ++   +         + +    +A   
Sbjct: 46  KQPVSPDYVAESFSEAMKNALTSVNDLQVEADELTQKMVFDPNSVDAHQVMIASEKARVA 105

Query: 86  LNLSIALRDKILSAVSEVSKM 106
           L  +  + D ++ A  E++ +
Sbjct: 106 LTFTKTIADGVVRAYRELTSL 126


>gi|261821174|ref|YP_003259280.1| flagellar hook-basal body protein FliE [Pectobacterium wasabiae
           WPP163]
 gi|261605187|gb|ACX87673.1| flagellar hook-basal body complex subunit FliE [Pectobacterium
           wasabiae WPP163]
          Length = 104

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG +  +       ++      +     S    F++ L+          + A     
Sbjct: 1   MSIQGIDGVLQQMQVKALQASG---TPIARPSVEPGFASELKAAIDKISDTQQIARAQGE 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  ++ + I +R+K++SA  EV  M +
Sbjct: 58  KFTMGVPGVALNDVMVDLQKSSISMQMGIQVRNKLVSAYQEVMNMSV 104


>gi|294636864|ref|ZP_06715196.1| flagellar hook-basal body complex protein FliE [Edwardsiella tarda
           ATCC 23685]
 gi|291089925|gb|EFE22486.1| flagellar hook-basal body complex protein FliE [Edwardsiella tarda
           ATCC 23685]
          Length = 116

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 40/106 (37%), Gaps = 5/106 (4%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            + G  + +       +              +P +FS  L+        +   A   +  
Sbjct: 14  AVTGIENVLQQLQATALSASNRTPQE---SVAPGAFSTELKAAIDRISDNQNHARVQAQQ 70

Query: 65  ALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G    ++ + +  + ++  +L + I +R+++++A  ++  MQ+
Sbjct: 71  FEMGVPGVALNDVMLDLQKSSVSLQMGIQVRNRLVAAYQDIMNMQV 116


>gi|89098645|ref|ZP_01171527.1| flagellar hook-basal body protein [Bacillus sp. NRRL B-14911]
 gi|89086607|gb|EAR65726.1| flagellar hook-basal body protein [Bacillus sp. NRRL B-14911]
          Length = 103

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 14  SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
           S   +I      T  +         SF+++L+           +++ ++    +G    +
Sbjct: 8   SPVSSIMQPAKITGTAAGSAAEGHKSFASMLKQSIDNVNSSQLQSDVMTEKLARGEDIGL 67

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            E +    +A  T+  ++ +R+K++ A  E  +MQ+
Sbjct: 68  HEVMIASQKASITMQAALEVRNKVIEAYQETMRMQV 103


>gi|254442973|ref|ZP_05056449.1| flagellar hook-basal body complex protein FliE [Verrucomicrobiae
           bacterium DG1235]
 gi|198257281|gb|EDY81589.1| flagellar hook-basal body complex protein FliE [Verrucomicrobiae
           bacterium DG1235]
          Length = 114

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNS---FISHTDTIGMRYDFTQNSNEEG---GSSPISFSALLQDMAKGAIGDM 55
           MI+ +    +   F  +             +  EG    +   SF +++           
Sbjct: 1   MIDSVSNLAAQQLFKQNQLEHTKLRSVEFPNQAEGLSKPTETKSFDSIVGKFVGEVDAKH 60

Query: 56  EKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   +   L G+T  + +++  + +A    N+ + +R+K++ +  E+ KM +
Sbjct: 61  KVAVAETNKMLLGETDNVHQSMIAMQEAGVAFNMMVEVRNKLVQSYQELMKMPV 114


>gi|257095335|ref|YP_003168976.1| flagellar hook-basal body protein FliE [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047859|gb|ACV37047.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 107

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           +G +  +S                    ++   F+ +L++         ++A+ ++ +  
Sbjct: 4   KGIDQMLSMLRATSAATGGRLAEAPSAPAAGTDFAQVLENSIAQVNQTQQQAQAMAASFA 63

Query: 67  QGKT--SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G    ++ + +  + +A  +    + +R+K++SA  +V  MQ+
Sbjct: 64  AGNNTENLHDVMIALQKANISFQEMVQVRNKLVSAYHDVMNMQV 107


>gi|78776564|ref|YP_392879.1| flagellar hook-basal body protein FliE [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497104|gb|ABB43644.1| Flagellar hook-basal body complex protein FliE [Sulfurimonas
           denitrificans DSM 1251]
          Length = 99

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I+ I G +S            +  +  ++  G+    F+  L+          + +E   
Sbjct: 4   IDGISGISS-----------AELLKQKSKVEGAGGEDFANHLKSAINEVNELQQNSELAL 52

Query: 63  LAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   + +A   I +AE ++ L + +R+K LSA  E+S+ Q+
Sbjct: 53  GDMATGQVKDLHQAALAIGKAETSMKLMLEIRNKALSAYKELSRTQL 99


>gi|307720250|ref|YP_003891390.1| flagellar hook-basal body complex subunit FliE [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978343|gb|ADN08378.1| flagellar hook-basal body complex subunit FliE [Sulfurimonas
           autotrophica DSM 16294]
          Length = 100

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I++           Q S  E G    +F+  L+          + +E        G+   
Sbjct: 4   INNISGASTADLLKQKSAVEKGGGGEAFAEQLKSAINEVNDIQQDSEKAIADLATGQVKD 63

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +A   I +AE ++ L + +R+K L+A  E+ + Q+
Sbjct: 64  LHQAALAIGKAETSMKLMLEIRNKALNAYKEIGRTQL 100


>gi|120598249|ref|YP_962823.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           W3-18-1]
 gi|146293673|ref|YP_001184097.1| flagellar hook-basal body complex subunit FliE [Shewanella
           putrefaciens CN-32]
 gi|120558342|gb|ABM24269.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           W3-18-1]
 gi|145565363|gb|ABP76298.1| flagellar hook-basal body complex subunit FliE [Shewanella
           putrefaciens CN-32]
          Length = 111

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I          S    I   +  + N   +   +S   F  LL        G    + 
Sbjct: 1   MQIGANTFLQEMQSLKGEITPSFGISPNIMQQVNNTSGADFGQLLSQAVGNVSGLQSTSS 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           N++     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  NLATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|24374741|ref|NP_718784.1| flagellar hook-basal body complex protein FliE [Shewanella
           oneidensis MR-1]
 gi|24349403|gb|AAN56228.1|AE015760_7 flagellar hook-basal body complex protein FliE [Shewanella
           oneidensis MR-1]
          Length = 112

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M I          S    +   +  + N+   +   +S   F  LL        G    +
Sbjct: 1   MQIGANSLLQEMQSLKGEVTPSFGISPNNIVQQVNNTSGADFGQLLSQAIGNVSGLQSTS 60

Query: 59  ENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            N++     G    S+ ++V    +A      +I +R+K++ A  E+  M +
Sbjct: 61  SNLATRLDMGDTTVSLSDSVIAREKASVAFEATIQVRNKLVEAYKEIMSMPV 112


>gi|306841050|ref|ZP_07473774.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
 gi|306288939|gb|EFM60239.1| flagellar hook-basal body protein FliE [Brucella sp. BO2]
          Length = 111

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  I   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSISARNALSRLSETVAEKGVGSASAPQAVPATPGASFGEVLSQMTDSVGQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|227112542|ref|ZP_03826198.1| flagellar hook-basal body protein FliE [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227329939|ref|ZP_03833963.1| flagellar hook-basal body protein FliE [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 104

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG +  +       ++     ++     S    F++ L+          + A   + 
Sbjct: 1   MSVQGIDGVLQQMQVKALQAA---DTPIARPSVEPGFASELKAAIDKISDTQQTARTQAE 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  ++ + I +R+K++SA  EV  M +
Sbjct: 58  KFTLGVPGVALNDVMVDLQKSSISMQMGIQVRNKLVSAYQEVMNMSV 104


>gi|154253014|ref|YP_001413838.1| flagellar hook-basal body complex subunit FliE [Parvibaculum
           lavamentivorans DS-1]
 gi|154156964|gb|ABS64181.1| flagellar hook-basal body complex subunit FliE [Parvibaculum
           lavamentivorans DS-1]
          Length = 107

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  I  + +  ++    GM              +   F  +L+      +   +  E   
Sbjct: 1   MTTIPASTALNAYARAAGMGGGAQSPQTGGLKEAGGGFGDMLKQALDETVETSKSGEMKM 60

Query: 63  LAAL-QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A       ++ + V  + +AE TL   + +RDK+++A  E+ +M I
Sbjct: 61  AALTGTRDGNIVDVVTAVAEAETTLQTVVTVRDKVIAAYQEILRMPI 107


>gi|332526952|ref|ZP_08403041.1| flagellar hook-basal body complex subunit FliE [Rubrivivax
           benzoatilyticus JA2]
 gi|332111391|gb|EGJ11374.1| flagellar hook-basal body complex subunit FliE [Rubrivivax
           benzoatilyticus JA2]
          Length = 109

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMREAVDHIMQ 81
                   E  +   SF + + +  + A  +  +A+ +   +A      S+ E +  + +
Sbjct: 23  GTPLVGKTEAPAQGGSFRSAMAEALQDASRNQLEAQRLQREVALDNPTVSLEETMVAMQK 82

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A+     ++ +R++++SA +E+  MQ+
Sbjct: 83  AQLGFQATVQVRNRLVSAYTEIMNMQV 109


>gi|288958049|ref|YP_003448390.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
 gi|288910357|dbj|BAI71846.1| flagellar hook-basal body complex protein [Azospirillum sp. B510]
          Length = 99

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 43/79 (54%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLS 89
                    SF  +L+  AK +IG ++K+E++S  A  GK  + + V  +  AE TL   
Sbjct: 21  PGMAARDGASFGDVLEQAAKESIGTLKKSEDMSALATVGKADLNDVVQAVTNAEVTLQTV 80

Query: 90  IALRDKILSAVSEVSKMQI 108
            A+RDK+L+A  E+ +M +
Sbjct: 81  TAVRDKVLNAYQEILRMPM 99


>gi|269836583|ref|YP_003318811.1| flagellar hook-basal body complex subunit FliE [Sphaerobacter
           thermophilus DSM 20745]
 gi|269785846|gb|ACZ37989.1| flagellar hook-basal body complex subunit FliE [Sphaerobacter
           thermophilus DSM 20745]
          Length = 100

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIM 80
                        +   SF+ +++         +  A+++++    G+   + E +  + 
Sbjct: 13  ASTAIIQPRSTQSADGASFTNMIEQALGELNQSLNLADDLAMRLAAGEEVDLHEVMIALE 72

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   L  +I +R++++ A  E+  M +
Sbjct: 73  MAGIGLQTAIQIRNRVIEAYKEIMAMPV 100


>gi|126462455|ref|YP_001043569.1| flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221639465|ref|YP_002525727.1| Flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides KD131]
 gi|332558479|ref|ZP_08412801.1| FliE [Rhodobacter sphaeroides WS8N]
 gi|1419201|emb|CAA67252.1| FliE protein [Rhodobacter sphaeroides]
 gi|126104119|gb|ABN76797.1| flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221160246|gb|ACM01226.1| Flagellar hook-basal body complex subunit FliE [Rhodobacter
           sphaeroides KD131]
 gi|332276191|gb|EGJ21506.1| FliE [Rhodobacter sphaeroides WS8N]
          Length = 107

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 3/109 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+ I G        D    +    Q   +   ++  +FS  L    +       +A  
Sbjct: 1   MTIQSISGALPLGGLQDASASQR--PQPLGQTDRTAAPAFSERLGHAVEDLARAQSEAGE 58

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A  +G+T ++ E +     +     L++ +R+K L A  ++  M +
Sbjct: 59  KAAAFERGETGNLAEVMISQQVSSLGFQLALNVRNKALGAYRDIMNMPV 107


>gi|320529386|ref|ZP_08030474.1| flagellar hook-basal body complex protein FliE [Selenomonas
           artemidis F0399]
 gi|320138352|gb|EFW30246.1| flagellar hook-basal body complex protein FliE [Selenomonas
           artemidis F0399]
          Length = 100

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
           +   SF   L+D           +E+       G+   + + V    +AE  L L++ LR
Sbjct: 26  AETKSFGTYLKDALSEVNRLQLDSEHQDALLAAGEVQDVSQVVVAGQKAEIALQLTLQLR 85

Query: 94  DKILSAVSEVSKMQI 108
           ++ +SA  E+ +MQ+
Sbjct: 86  NRAVSAYQEIMRMQV 100


>gi|119476322|ref|ZP_01616673.1| flagellar hook-basal body complex protein (FliE) [marine gamma
           proteobacterium HTCC2143]
 gi|119450186|gb|EAW31421.1| flagellar hook-basal body complex protein (FliE) [marine gamma
           proteobacterium HTCC2143]
          Length = 126

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 2/91 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVD 77
                   ++   G +    F  +            + + N+S A  QG    S+ + + 
Sbjct: 36  AALRVGGDSNQITGAAKGPQFGDMFSAAINSVNETQQTSANLSTAYQQGDAGISLSQVMV 95

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +A  +      +R+KI+ A  +V  M I
Sbjct: 96  ASEKASVSFQALTQVRNKIVEAYQDVMNMPI 126


>gi|71906415|ref|YP_284002.1| flagellar hook-basal body protein FliE [Dechloromonas aromatica
           RCB]
 gi|71846036|gb|AAZ45532.1| Flagellar hook-basal body complex protein FliE [Dechloromonas
           aromatica RCB]
          Length = 107

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
           G    +S   T   +            +    F+ +LQ          ++A+ ++     
Sbjct: 5   GIEQMLSALRTTATQATGKAADTSASAAGGADFAQILQGSIDKVNQTQQQADQMAEKLAA 64

Query: 68  GKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G T+  + E +  +  A  +    + +R+K+++A  +V  MQI
Sbjct: 65  GDTNQNLHEVMIALQTASVSFQEMVQVRNKLVTAYQDVMNMQI 107


>gi|183598655|ref|ZP_02960148.1| hypothetical protein PROSTU_02062 [Providencia stuartii ATCC 25827]
 gi|188020841|gb|EDU58881.1| hypothetical protein PROSTU_02062 [Providencia stuartii ATCC 25827]
          Length = 121

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ     +S   T  ++    Q         P+ F+  L            ++     
Sbjct: 19  MTIQAIEGVLSQLQTTALQAANHQK----PVVEPVGFADHLVSAVNQINTVRNQSAKQIE 74

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + +A  +L + I +R+K+++A  EV  + +
Sbjct: 75  DFTLGKSNVSLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEVMSIPV 121


>gi|170741835|ref|YP_001770490.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           sp. 4-46]
 gi|168196109|gb|ACA18056.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           sp. 4-46]
          Length = 112

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQ-----NSNEEGGSSPISFSALLQDMAKGAIGDME 56
           MIE +   N+ I  T  +             +       +  +F  ++  +A G    + 
Sbjct: 1   MIEAVASLNALIDRTGPVSGPSSAGLLQGVLSPAPTAIPTGPAFGDVMAQIASGMRDTLR 60

Query: 57  KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             E  ++A LQGK S ++ V+ ++ AE++L  +IA+RDK+++A  E+S+M I
Sbjct: 61  AGEATAIAGLQGKASAQQVVEAVLSAEQSLQTTIAIRDKVVAAYLEISRMAI 112


>gi|327441056|dbj|BAK17421.1| flagellar hook-basal body protein [Solibacillus silvestris StLB046]
          Length = 102

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTS 71
           IS         +    +     ++   F+  L++         + ++ ++   + G    
Sbjct: 6   ISFMSPAQSVNEVNVQNQLTPANAQQQFADTLKEAIASVTEHQKTSDTMTQKLINGGDVD 65

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + E +    +A  TLN +I +R+K + A  E+ +M +
Sbjct: 66  LFEVMIAAQKASVTLNTTIEVRNKAVEAYQEIMRMSV 102


>gi|288573031|ref|ZP_06391388.1| flagellar hook-basal body complex subunit FliE [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568772|gb|EFC90329.1| flagellar hook-basal body complex subunit FliE [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 101

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNL 88
           + E  +   SF   L++   G       +  +      G    + E    + +A     L
Sbjct: 22  SPEVAAPARSFEDSLKEAVVGVNELQMDSNAMVQRLSLGDVDDVSEVTLSVEKASLAFQL 81

Query: 89  SIALRDKILSAVSEVSKMQI 108
            + +RDK++ A  ++S+M +
Sbjct: 82  LVRVRDKLVDAYQQLSRMAV 101


>gi|77463623|ref|YP_353127.1| flagellar protein FliE [Rhodobacter sphaeroides 2.4.1]
 gi|77388041|gb|ABA79226.1| flagellar protein FliE [Rhodobacter sphaeroides 2.4.1]
          Length = 107

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 3/109 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+ I G        D    +    Q   +   ++  +FS  L    +       +A  
Sbjct: 1   MTIQSISGALPLGGLQDASASQR--PQPLGQTERTAAPAFSERLGHAVEDLARAQSEAGE 58

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A  +G+T ++ E +     +     L++ +R+K L A  ++  M +
Sbjct: 59  KAAAFERGETGNLAEVMISQQVSSLGFQLALNVRNKALGAYRDIMNMPV 107


>gi|239834443|ref|ZP_04682771.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
           LMG 3301]
 gi|239822506|gb|EEQ94075.1| flagellar hook-basal body protein FliE [Ochrobactrum intermedium
           LMG 3301]
          Length = 111

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  I   N+    ++T+  +   + ++ +    +   SF  +L  M       +E AE  
Sbjct: 5   IMSISARNALSRLSETVVEKGVGSASAPQAVPATPGASFGEVLSQMTDSVGQKLEAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|226225738|ref|YP_002759844.1| flagellar hook-basal body complex protein FliE [Gemmatimonas
           aurantiaca T-27]
 gi|226088929|dbj|BAH37374.1| flagellar hook-basal body complex protein FliE [Gemmatimonas
           aurantiaca T-27]
          Length = 106

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 1/84 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAE 83
            TQ    + G+   SF   L           +++ +++     G    + E +    +A 
Sbjct: 22  TTQVPVGDVGTGENSFGNTLTRAINEVSDARDRSGDLTKRFAAGENVELHEVMAASEEAG 81

Query: 84  RTLNLSIALRDKILSAVSEVSKMQ 107
             L++ I LR+K++ A   V  MQ
Sbjct: 82  IALDMLIELRNKVVEAYRSVISMQ 105


>gi|91776331|ref|YP_546087.1| flagellar hook-basal body protein FliE [Methylobacillus flagellatus
           KT]
 gi|91710318|gb|ABE50246.1| flagellar hook-basal body complex protein (FliE) [Methylobacillus
           flagellatus KT]
          Length = 121

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 2/101 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
            +    TDT          + +   S+ + F+ +L+           KAE +  +   G 
Sbjct: 21  AAQKPATDTAMHGISGNSPAQKPQASNRVDFADVLKSSISQVNQAQVKAEELGQSFAMGD 80

Query: 70  --TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              S+ + +    +A  +L  +I +R++++SA  ++  MQ+
Sbjct: 81  DKVSLSDVMVAGQKANISLQATIQVRNRLVSAYQDIMNMQV 121


>gi|299066534|emb|CBJ37724.1| Flagellar hook-basal body complex protein fliE [Ralstonia
           solanacearum CMR15]
          Length = 104

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M E IQ     ++         D   +       + + F  L+    +G    +  ++  
Sbjct: 1   MTEAIQA----LAQAGNSEAVADLQASPAAAAPVAGMGFGDLVSQGLEGVNQQLLVSQKD 56

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 G   S+ + +  + ++  +  L + +R+++L A  +V KMQ+
Sbjct: 57  LQQLATGNAESLHQVMIRLEESRLSFQLLLQVRNRLLEAYQDVMKMQV 104


>gi|254720611|ref|ZP_05182422.1| flagellar hook-basal body protein FliE [Brucella sp. 83/13]
 gi|265985651|ref|ZP_06098386.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
 gi|306838573|ref|ZP_07471410.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
 gi|264664243|gb|EEZ34504.1| flagellar hook-basal body complex protein fliE [Brucella sp. 83/13]
 gi|306406359|gb|EFM62601.1| flagellar hook-basal body protein FliE [Brucella sp. NF 2653]
          Length = 111

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSVSARNALSRLSETVAEKGVGSASAPQAVPTTPGASFGEVLSQMTDSVGQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|304438471|ref|ZP_07398411.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
 gi|304368554|gb|EFM22239.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
          Length = 100

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
               S    F   L+D           +E  +     G+   + + +    +AE  L L+
Sbjct: 22  TIDKSQRKDFGTYLKDALSEVNHLQLASEEQTKLLAAGEVEDVSQVIVAGQKAEIALQLT 81

Query: 90  IALRDKILSAVSEVSKMQI 108
           + +R++ +SA  E+ +MQ+
Sbjct: 82  LQMRNRAVSAYQEIMRMQV 100


>gi|148976412|ref|ZP_01813118.1| flagellar hook-basal body protein FliE [Vibrionales bacterium
           SWAT-3]
 gi|145964235|gb|EDK29491.1| flagellar hook-basal body protein FliE [Vibrionales bacterium
           SWAT-3]
          Length = 103

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M    +      G +    F  +L           + + ++      G    S+ + 
Sbjct: 11  QAMMVEAASARPAATGQAVGADFGNMLTQAINNVNSLQKTSGDLQTRFDSGDQSVSLSDV 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ +  E+  M +
Sbjct: 71  MIARNKSSVAFEATIQIRNKLVESYKELMNMPV 103


>gi|114562359|ref|YP_749872.1| flagellar hook-basal body complex subunit FliE [Shewanella
           frigidimarina NCIMB 400]
 gi|114333652|gb|ABI71034.1| flagellar hook-basal body complex subunit FliE [Shewanella
           frigidimarina NCIMB 400]
          Length = 113

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 2/105 (1%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +Q   S                 + +   ++   FS LL           + + N++   
Sbjct: 9   MQEMQSLRGEIAPSIGSSIRPNLTQQVNNTTGADFSQLLSQAVGSVNELQQSSANLATRL 68

Query: 66  LQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 69  DMGDTTVTLSDTVIAREKAGVAFEATVQVRNKLVDAYKEIMSMPV 113


>gi|146341893|ref|YP_001206941.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. ORS278]
 gi|146194699|emb|CAL78724.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
           ORS278]
          Length = 118

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 42/80 (52%)

Query: 29  SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNL 88
           +         SFSALL+D     +    K+++ ++A   GK ++ + V  + + +  ++ 
Sbjct: 39  NGAGADKGGPSFSALLKDAIGSVVETGRKSDSQAVAMASGKANVMDVVTAVAETDVAVST 98

Query: 89  SIALRDKILSAVSEVSKMQI 108
            +++RD+++ A  +V KM I
Sbjct: 99  LVSVRDRVIQAYEDVMKMTI 118


>gi|225181612|ref|ZP_03735053.1| flagellar hook-basal body complex subunit FliE [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167720|gb|EEG76530.1| flagellar hook-basal body complex subunit FliE [Dethiobacter
           alkaliphilus AHT 1]
          Length = 99

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 39  SFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKIL 97
            F+  L             A+  +     G+   + + +  + QA+  + L++ +R+K++
Sbjct: 29  GFAGTLHKALGEVNQLQVNADEAAQKLAMGEAEDIHQVMIAMEQAKMAMQLTVQVRNKVV 88

Query: 98  SAVSEVSKMQI 108
            A  EVS+MQ+
Sbjct: 89  EAYQEVSRMQL 99


>gi|21242699|ref|NP_642281.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108172|gb|AAM36817.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 105

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
             G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 13  ARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPKADLARV 72

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 73  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 105


>gi|90411022|ref|ZP_01219036.1| flagellar hook-basal body protein [Photobacterium profundum 3TCK]
 gi|90328235|gb|EAS44546.1| flagellar hook-basal body protein [Photobacterium profundum 3TCK]
          Length = 103

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIM 80
                +    G      F AL  D  K       ++ ++S    QG    S+ + +    
Sbjct: 16  EAQNTSRPATGQQVSADFGALFNDAVKSVNQLQSQSSDLSTRFDQGDRSVSLSDVMIARN 75

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++      ++ +R+K++ A  E+  M +
Sbjct: 76  KSSVAFEATVQVRNKMVEAYKELMNMPV 103


>gi|293395604|ref|ZP_06639887.1| flagellar hook-basal body complex protein FliE [Serratia odorifera
           DSM 4582]
 gi|291421923|gb|EFE95169.1| flagellar hook-basal body complex protein FliE [Serratia odorifera
           DSM 4582]
          Length = 104

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +       ++     N+     +   SF++ L+          + A   + 
Sbjct: 1   MAIQGIEGVLQQLQATALQAGGITNAP---PAQGASFASELKAAIGKISNIQQTARQQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + ++  +L + I +R+K+++A  +V  MQ+
Sbjct: 58  NFEMGVPGISLNDVMVDLQKSSVSLQMGIQVRNKLVAAYQDVMNMQV 104


>gi|56460309|ref|YP_155590.1| flagellar hook-basal body protein [Idiomarina loihiensis L2TR]
 gi|56179319|gb|AAV82041.1| Flagellar hook-basal body protein [Idiomarina loihiensis L2TR]
          Length = 110

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +E         S       R   T  +  +G ++   FS +L++         + + +
Sbjct: 1   MKVEANALYQQLQSMATQASQRDQPTNVNALQGNTAQADFSNMLKNALDNVNELQQTSGD 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +      G    ++ + +    ++      ++ +R+K++ A  E+  M +
Sbjct: 61  LKTRMELGDPNVTLEQTMIASQKSSIAFEATVQVRNKVVEAYKEIMSMPV 110


>gi|188991618|ref|YP_001903628.1| Flagellar hook-basal body complex protein FliE [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167733378|emb|CAP51579.1| Flagellar hook-basal body complex protein FliE [Xanthomonas
           campestris pv. campestris]
          Length = 105

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
             G +      ++    +   SFS  L+    G     +K+  ++ A   G     +   
Sbjct: 13  ARGNQIQGLAGAHGTPATQAPSFSETLRGAIGGVNEAQQKSGALAKAFEMGDPSADLARV 72

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 73  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 105


>gi|317406224|gb|EFV86470.1| flagellar hook-basal body complex protein FliE [Achromobacter
           xylosoxidans C54]
          Length = 110

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +        + +    +  E  + P  F+A LQ   +        A  
Sbjct: 1   MAVSGLSGIESMLQQMRVAVTKAETGNLAAGEAVAQPDGFAAELQRSIRRVTSAQNAATA 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G    S+ + +  + +A      ++ +R+K+++A  E+S M +
Sbjct: 61  QAKAFELGAPDVSLNDVMIDLQKASIGFQTAVQVRNKLVAAYKEISSMAV 110


>gi|121533764|ref|ZP_01665591.1| flagellar hook-basal body complex subunit FliE [Thermosinus
           carboxydivorans Nor1]
 gi|121307755|gb|EAX48670.1| flagellar hook-basal body complex subunit FliE [Thermosinus
           carboxydivorans Nor1]
          Length = 99

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
            I+      +             +S   F+  L D  +      ++A+  SL    GK  
Sbjct: 2   QIAKLGLSPVGSRINAEGATSSQNSHKDFAQFLTDALRDVNRLQQEAQQASLNLAAGKVQ 61

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + E V    +A   L L++ +R+K++ A  EV +MQ+
Sbjct: 62  DISEVVIAAEKATIALQLTMQVRNKVVDAYQEVMRMQV 99


>gi|293605028|ref|ZP_06687422.1| flagellar hook-basal body complex protein FliE [Achromobacter
           piechaudii ATCC 43553]
 gi|292816577|gb|EFF75664.1| flagellar hook-basal body complex protein FliE [Achromobacter
           piechaudii ATCC 43553]
          Length = 110

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +    T+  + +    +  E    P  F+A LQ   +        +  
Sbjct: 1   MAVSGLNGIESMLQQMRTVVSKAETGNLAAGEAVGQPDGFAAELQRSIRRVTSAQNASSA 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G    S+ + +  + +A      ++ +R+K+++A  E+S M +
Sbjct: 61  QAKAFEMGAPDISLNDVIIDMQKASLGFQTAVQVRNKLVAAYKEISSMAV 110


>gi|268589959|ref|ZP_06124180.1| flagellar hook-basal body complex protein FliE [Providencia
           rettgeri DSM 1131]
 gi|291314676|gb|EFE55129.1| flagellar hook-basal body complex protein FliE [Providencia
           rettgeri DSM 1131]
          Length = 103

 Score = 65.4 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q     IS  + +  +      +  +    P+ F+  L             +     
Sbjct: 1   MTVQAIEGVISQLNVVATQA----TNPIKPVIEPVGFADHLVASVNQINKTRNDSAKQVE 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + +A  +L + I +R+K+++A  E+  M +
Sbjct: 57  NFTLGKQDISLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEIMSMPV 103


>gi|119469984|ref|ZP_01612789.1| flagellar biosynthesis; basal-body component [Alteromonadales
           bacterium TW-7]
 gi|119446694|gb|EAW27967.1| flagellar biosynthesis; basal-body component [Alteromonadales
           bacterium TW-7]
          Length = 110

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+         S     G      +   +   SS   F  +L D      G  + A+ 
Sbjct: 1   MKIQNSAVFQEMQSMALEAGRNNPIERLPVKTQASSTAQFGDMLSDAINTVHGLQQDAKQ 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A   G    S+ EA+    ++      ++ +R+K++ A  E+  M +
Sbjct: 61  KVVAVETGDRSVSLAEAMIASQKSSVAFEATVQVRNKLVEAYKEIMNMPV 110


>gi|238924171|ref|YP_002937687.1| hypothetical protein EUBREC_1809 [Eubacterium rectale ATCC 33656]
 gi|238875846|gb|ACR75553.1| Hypothetical protein EUBREC_1809 [Eubacterium rectale ATCC 33656]
 gi|291524900|emb|CBK90487.1| flagellar hook-basal body complex protein FliE [Eubacterium rectale
           DSM 17629]
 gi|291529041|emb|CBK94627.1| flagellar hook-basal body complex protein FliE [Eubacterium rectale
           M104/1]
          Length = 104

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 12/112 (10%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDM---AKGAIGDMEK 57
           M I  I G +         G    F  N++        SFS +L                
Sbjct: 1   MDISNINGIS--------TGDIKSFFNNTSLTKTDKTDSFSDVLSAAMGSIGETNDLQNA 52

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE   +    G++    + +    +A   L  ++A+RDKI+ A  E+ +M I
Sbjct: 53  AEQEEVRFALGESDNTHDLLVAETKAAVALQYTVAVRDKIIDAYKELMQMSI 104


>gi|78047555|ref|YP_363730.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78035985|emb|CAJ23676.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 123

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
            +G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 31  ALGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPNADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|317011793|gb|ADU85540.1| flagellar hook-basal body protein FliE [Helicobacter pylori
           SouthAfrica7]
          Length = 109

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
           ++S+         FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 27  ESSSAFKEQKGGEFSKLLKQSINELNSTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 86

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 87  MKLMLEVRNKAISAYKELLRTQI 109


>gi|332187873|ref|ZP_08389606.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
           S17]
 gi|332012034|gb|EGI54106.1| flagellar hook-basal body complex protein FliE [Sphingomonas sp.
           S17]
          Length = 124

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 1   MMIEQIQGTNSFISHTDTI------GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD 54
           M ++++    + I   +               Q +  +  + P SF+  L+   KG    
Sbjct: 10  MSVDRVMALRAQILERNQALKAASQAGANQAAQAAQTQPVAPPTSFADTLESALKGVNEG 69

Query: 55  MEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++A  +S +  +G+   + + +    QA      ++ +R+K+LSA  ++  M +
Sbjct: 70  QQQAARLSESYERGETVDIAKVMMARQQASVGFEATLQVRNKLLSAYKDIMSMPV 124


>gi|207092227|ref|ZP_03240014.1| flagellar hook-basal body protein FliE [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 87

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
             +          FS LL+          E+++        G+   + +A   I +AE +
Sbjct: 5   NQAAPLKNKKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETS 64

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K +SA  E+ + QI
Sbjct: 65  MKLMLEVRNKAISAYKELLRTQI 87


>gi|110677660|ref|YP_680667.1| flagellar hook-basal body protein FliE [Roseobacter denitrificans
           OCh 114]
 gi|109453776|gb|ABG29981.1| flagellar hook-basal body complex protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 108

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 44/108 (40%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M ++ +    +F +      +          E      S S  L  +AK     + ++E 
Sbjct: 1   MDMKAVSAIQNFTNARAASAIESYQQARPATEPLPEESSASETLGRVAKDFASTLAESEE 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ +++ G       V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 61  IAKSSMVGDADPHALVQALAQTELAVEAAVRVRNKVVEAYQEILRMPV 108


>gi|83646782|ref|YP_435217.1| flagellar hook-basal body complex protein FliE [Hahella chejuensis
           KCTC 2396]
 gi|83634825|gb|ABC30792.1| flagellar hook-basal body complex protein (FliE) [Hahella
           chejuensis KCTC 2396]
          Length = 98

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
             +   ++   +S +SF+  L          +  A++ +     G+  ++ + +  + +A
Sbjct: 13  GESSAIHKSAKASGVSFADWLGGEVNQVNQQLAAADSAARTLATGEAENLHQVMIALDKA 72

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           + +++L + +R+++L +  EV +M I
Sbjct: 73  QLSMSLMVEVRNRLLESYQEVMRMSI 98


>gi|104782822|ref|YP_609320.1| flagellar hook-basal body protein FliE [Pseudomonas entomophila
           L48]
 gi|122402481|sp|Q1I749|FLIE_PSEE4 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|95111809|emb|CAK16533.1| flagellar basal-body component FliE [Pseudomonas entomophila L48]
          Length = 110

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
                     +  E      SF+ +L           + +  ++ A   GK    + + +
Sbjct: 19  AEAMSTPKTTAAPELAPGQSSFADMLGQAIGKVHETQQASSQLANAFEIGKSGVDLTDVM 78

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               +A  +      +R+K++ A  ++ +M +
Sbjct: 79  IASQKASVSFQALTQVRNKLVQAYQDIMQMPV 110


>gi|134095074|ref|YP_001100149.1| flagellar hook-basal body protein FliE [Herminiimonas
           arsenicoxydans]
 gi|133738977|emb|CAL62025.1| Flagellar hook-basal body complex protein FliE [Herminiimonas
           arsenicoxydans]
          Length = 119

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I+ +       +      +       S  E  ++ + FS  L+            A+ + 
Sbjct: 12  IDAMVAQLKAAAARSQPAINPLAGGASPVEKSATKVDFSQALKASLDNVASAQNHADKLG 71

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G    ++ + +  + +A  +   ++ +R+K++SA  E+  MQ+
Sbjct: 72  QKFTLGDDSVNLSDVMISMQKASISFQATVQMRNKVVSAYQEIMNMQV 119


>gi|157371186|ref|YP_001479175.1| flagellar hook-basal body complex subunit FliE [Serratia
           proteamaculans 568]
 gi|166988342|sp|A8GG07|FLIE_SERP5 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|157322950|gb|ABV42047.1| flagellar hook-basal body complex subunit FliE [Serratia
           proteamaculans 568]
          Length = 104

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +       ++       +    +  +SF++ L+          + A   + 
Sbjct: 1   MAIQGIEGVLQQLQATAIQAG---QMDRGAAAPGVSFASELKTAIGKISDTQQAARKQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + ++  +L + + +R+K++SA  EV  M +
Sbjct: 58  DFEIGVPGISLNDVLVDLQKSSISLQMGVQVRNKLVSAYQEVMNMAV 104


>gi|226944513|ref|YP_002799586.1| flagellar hook-basal body complex protein [Azotobacter vinelandii
           DJ]
 gi|226719440|gb|ACO78611.1| flagellar hook-basal body complex protein [Azotobacter vinelandii
           DJ]
          Length = 108

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 3/104 (2%)

Query: 8   GTNSFISHTDT-IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
              S +       G     +    +    +P SF+  L+          + A + S A  
Sbjct: 5   AIQSALQQMQILAGQAAGASAPGPQPAELAPGSFAGELRAAIHRINHLQQTASDSSDAFQ 64

Query: 67  QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G+   ++ + +  + +A     + + +R++++SA  EV  MQI
Sbjct: 65  AGEPGVALNDVMVDMQKASVAFQMGVQVRNRLVSAYKEVMNMQI 108


>gi|313895965|ref|ZP_07829519.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312975390|gb|EFR40851.1| flagellar hook-basal body complex protein FliE [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 100

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
           +   SF   L+D           +E+       G+   + + +    +AE  L L++ LR
Sbjct: 26  AETKSFGTYLKDALSEVNRLQLDSEHQDALLAAGEVQDVSQVIVAGQKAEIALQLTLQLR 85

Query: 94  DKILSAVSEVSKMQI 108
           ++ +SA  E+ +MQ+
Sbjct: 86  NRAVSAYQEIMRMQV 100


>gi|283782091|ref|YP_003372846.1| flagellar hook-basal body complex subunit FliE [Pirellula staleyi
           DSM 6068]
 gi|283440544|gb|ADB18986.1| flagellar hook-basal body complex subunit FliE [Pirellula staleyi
           DSM 6068]
          Length = 102

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 3/104 (2%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +                      + + GG+ P  F  +L +           A+      
Sbjct: 1   MTSIQGLSLPIPLSPPSTGAIGGAEQTGGAQP--FKNVLLEALDQVNNVQHDADQAVQQL 58

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + G   +  E +  + +A+ +  + + +R+K++ A  EVS ++I
Sbjct: 59  VTGGDVNPAEVLTTLQKADMSFRMMMQIRNKLVQAYQEVSNIRI 102


>gi|126175129|ref|YP_001051278.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS155]
 gi|125998334|gb|ABN62409.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS155]
          Length = 111

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I               I   +    N   +   +S   F  LL        G    + 
Sbjct: 1   MQIGANSFLQEMQKLQGEITPSFGVQPNIMQQVNNTSGADFGQLLSQAVGNVSGLQSTSS 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           N++     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  NLATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|238758091|ref|ZP_04619271.1| Flagellar hook-basal body complex protein fliE [Yersinia aldovae
           ATCC 35236]
 gi|238703629|gb|EEP96166.1| Flagellar hook-basal body complex protein fliE [Yersinia aldovae
           ATCC 35236]
          Length = 103

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVSALQASGSVKTLPAEA----GFASELKAAIGKISDNQQHARTQAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++  +L L I +R+K++SA  EV  M +
Sbjct: 57  NFTLGVPGVGLNDVMVDMQKSSVSLQLGIQVRNKLVSAYQEVMNMGV 103


>gi|302342346|ref|YP_003806875.1| flagellar hook-basal body complex subunit FliE [Desulfarculus
           baarsii DSM 2075]
 gi|301638959|gb|ADK84281.1| flagellar hook-basal body complex subunit FliE [Desulfarculus
           baarsii DSM 2075]
          Length = 97

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 15  HTDTIGMRYDFTQNSNE-EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
               I         +   +   +   F+  L+          + AEN       G + ++
Sbjct: 2   SVGPIKPLVGMVTGTPGFQDPKAQGGFADTLKQAVNEVEQMHQTAENSVQDLATGSRKTL 61

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
            + +  + +A+    + + +R K++ A  E+ +M
Sbjct: 62  HQTMIDVEKADIAFRMLMGVRGKMIGAYQEIWRM 95


>gi|183220162|ref|YP_001838158.1| flagellar hook-basal body protein FliE [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167778584|gb|ABZ96882.1| Flagellar hook-basal body complex protein FliE [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 121

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 40/117 (34%), Gaps = 14/117 (11%)

Query: 1   MMIEQIQGTNS-------FISHTDTIGMRYD-----FTQNSNEEGGSSPISFSALLQDMA 48
           M I++I   +S        +   D +G+           N  +       +F+  L+   
Sbjct: 1   MSIDRITHLSSSTYKPHSLLPQGDKVGIFRSDERHYGKTNEAKSPDEVAGTFADALKKAF 60

Query: 49  KGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           +       +A+ ++   +       + + +    +A  +L  +  + D  + A  E+
Sbjct: 61  EQVNDQQVEADELTQKIVFDPNSVELHDVMIAAEKARISLTFAKTMSDGFVRAYREL 117


>gi|42766710|gb|AAS45438.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
          Length = 144

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVS 101
           ++       GD +KA   + A   G    S+ + +  + +A       + +R+K++SA +
Sbjct: 78  MKASLDKISGDQQKALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYN 137

Query: 102 EVSKMQI 108
           E+ +M +
Sbjct: 138 EIMQMSV 144


>gi|150390488|ref|YP_001320537.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
           metalliredigens QYMF]
 gi|149950350|gb|ABR48878.1| flagellar hook-basal body complex subunit FliE [Alkaliphilus
           metalliredigens QYMF]
          Length = 101

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNL 88
            +E  +S  +F+ L ++    A    + A+N S+    G+   + EA+    +A+ +L  
Sbjct: 22  QKESNNSQTTFNDLFKNAINEANILDQMAQNDSVKLATGELDNIHEAMITAQKADVSLQF 81

Query: 89  SIALRDKILSAVSEVSKMQI 108
            + +R+K+L A  E+ +MQI
Sbjct: 82  IMQVRNKVLDAYREIMRMQI 101


>gi|90406820|ref|ZP_01215012.1| Flagellar hook-basal body protein [Psychromonas sp. CNPT3]
 gi|90312057|gb|EAS40150.1| Flagellar hook-basal body protein [Psychromonas sp. CNPT3]
          Length = 108

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGG--SSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
           ++ +++    G++     +        S+   FS +L+       G  +   ++  +   
Sbjct: 6   SALLNNLQLTGLQNRGVDSELSMPSMKSNAPDFSQMLKQAIDNVNGLQQNTSSLRNSFEM 65

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    S+ + +    ++    + ++ +R+K++ A  EV  M +
Sbjct: 66  GDPDVSLAQVMIASNKSGLAFDATVQIRNKMVEAYKEVMSMPV 108


>gi|262404480|ref|ZP_06081035.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC586]
 gi|262349512|gb|EEY98650.1| flagellar hook-basal body complex protein FliE [Vibrio sp. RC586]
          Length = 94

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      F A+L +      G  + + ++ +   +G    S+ + 
Sbjct: 2   QAMMFEAMNAQPASTGQKVGADFGAMLNNAINNVNGLQKNSSDMQMRFDRGDEGISLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSTVAFEATIQVRNKLVEAYKELMNMPV 94


>gi|238798571|ref|ZP_04642048.1| Flagellar hook-basal body complex protein fliE [Yersinia mollaretii
           ATCC 43969]
 gi|238717591|gb|EEQ09430.1| Flagellar hook-basal body complex protein fliE [Yersinia mollaretii
           ATCC 43969]
          Length = 103

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 38/107 (35%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F+  L+          + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFANELKAALGKISETQQHARTQAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  NFELGVPGVGLNDVMVDMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 103


>gi|225850272|ref|YP_002730506.1| flagellar hook-basal body complex protein FliE [Persephonella
           marina EX-H1]
 gi|225646455|gb|ACO04641.1| flagellar hook-basal body complex protein FliE [Persephonella
           marina EX-H1]
          Length = 94

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 1/94 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMRE 74
               G+    +  S ++       FS +L++       D++ A+        G+  ++  
Sbjct: 1   MRIEGLNDFTSLVSKQKNEKEVKPFSEVLEEFVADVNYDLKVAKEAERKIAAGEVENLEN 60

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  I +++ +L L   +R+K L +  E+ +MQ+
Sbjct: 61  LMYQIAKSDISLRLITEIRNKALESYQEIMRMQV 94


>gi|254519423|ref|ZP_05131479.1| flagellar hook-basal body protein FliE [Clostridium sp. 7_2_43FAA]
 gi|226913172|gb|EEH98373.1| flagellar hook-basal body protein FliE [Clostridium sp. 7_2_43FAA]
          Length = 100

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQ 81
                 +N +   S  SF + L+D           A+N++   + G    + E +  + +
Sbjct: 14  ESSINANNIKTSPSENSFQSALKDSLDKLNEKQINADNMTNDFISGKDVEVHEMMLSMEE 73

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ +L L+I +R+K++ AV E+++MQ+
Sbjct: 74  SKMSLQLAIQVRNKVVEAVQELTRMQL 100


>gi|148558234|ref|YP_001257212.1| flagellar hook-basal body protein FliE [Brucella ovis ATCC 25840]
 gi|166214843|sp|A5VTQ7|FLIE_BRUO2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|148369519|gb|ABQ62391.1| flagellar hook-basal body complex protein FliE [Brucella ovis ATCC
           25840]
          Length = 111

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L   IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTVIAIRDKIVQAYLEISRMPI 111


>gi|325926947|ref|ZP_08188227.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           perforans 91-118]
 gi|325542684|gb|EGD14146.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           perforans 91-118]
          Length = 123

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 31  ARGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPNADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|212634366|ref|YP_002310891.1| flagellar hook-basal body complex protein FliE [Shewanella
           piezotolerans WP3]
 gi|212555850|gb|ACJ28304.1| Flagellar hook-basal body complex protein FliE [Shewanella
           piezotolerans WP3]
          Length = 110

 Score = 65.0 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          S    IG +   T  + +   +S   F  LL             A N
Sbjct: 1   MQIGANSLLQEMQSLNGQIGTQGAQTSVARQVNNTSGADFGQLLSQAVGNVSELQSNASN 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     G    ++ + V    ++      ++ +R+K++ A  ++  M +
Sbjct: 61  LATRLDMGDTTVTLSDTVIAREKSSVAFEATVQVRNKLVEAYKDIMSMPV 110


>gi|220935139|ref|YP_002514038.1| flagellar hook-basal body protein FliE [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996449|gb|ACL73051.1| flagellar hook-basal body protein FliE [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 105

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N  ++    +        N+      S ++F+ +L+          + A  +  A   
Sbjct: 5   QINQVLAQMRALAANSGL--NATPAQEPSGVNFAQMLKQSLDQVNQTQQAASELRNAFEL 62

Query: 68  G--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    ++ + +  + ++  +      +R+++L+A  E+ +M +
Sbjct: 63  GDPNVNLAQVMVAMQKSSISFEAVNQVRNRLLNAYQEIMRMPL 105


>gi|256059609|ref|ZP_05449807.1| flagellar hook-basal body protein FliE [Brucella neotomae 5K33]
 gi|261323578|ref|ZP_05962775.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
           5K33]
 gi|261299558|gb|EEY03055.1| flagellar hook-basal body complex protein fliE [Brucella neotomae
           5K33]
          Length = 111

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   ITSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|77457762|ref|YP_347267.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
           Pf0-1]
 gi|38503179|sp|Q9EYT4|FLIE_PSEFL RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|123605486|sp|Q3KG28|FLIE_PSEPF RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|12056609|gb|AAG47967.1|AF312695_7 FliE [Pseudomonas fluorescens]
 gi|77381765|gb|ABA73278.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           fluorescens Pf0-1]
          Length = 109

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + I+     +             ++++     +  +FS +L           + +  +
Sbjct: 1   MSQGIEFNRLMMDMKAMQMDAMSKPKSTSAVPEVAGSNFSDMLGQAINKVNDTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMIASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|320354316|ref|YP_004195655.1| flagellar hook-basal body complex subunit FliE [Desulfobulbus
           propionicus DSM 2032]
 gi|320122818|gb|ADW18364.1| flagellar hook-basal body complex subunit FliE [Desulfobulbus
           propionicus DSM 2032]
          Length = 97

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA-LQGKTS 71
           +     +         +      +  SF  +L+ M        + A+         G+ +
Sbjct: 1   MEPIQAVTPSLTPALPARSAVAQAETSFGDMLKTMVAQTNEQQQNADQALQQVHAGGEKN 60

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + EA+  + +A+ +L   + +R+K +SA  E+ +MQ+
Sbjct: 61  LHEAMIALEKADVSLRYMVQVRNKAISAYQEIMQMQV 97


>gi|297538193|ref|YP_003673962.1| flagellar hook-basal body complex subunit FliE [Methylotenera sp.
           301]
 gi|297257540|gb|ADI29385.1| flagellar hook-basal body complex subunit FliE [Methylotenera sp.
           301]
          Length = 124

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
                   +      +       G+S ++FS  L+           +AE +  +   G  
Sbjct: 25  PQADAASGLASAAGLSSTQGVSQGTSKVNFSDALKASLNQVNKVQVEAEQLGKSFAMGDD 84

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ + +    +A  +   ++ +R+K++SA  ++  MQ+
Sbjct: 85  SVSLSDVMIAGQKANISFQATVQVRNKLVSAYHDIMNMQV 124


>gi|311105961|ref|YP_003978814.1| flagellar hook-basal body complex protein FliE [Achromobacter
           xylosoxidans A8]
 gi|310760650|gb|ADP16099.1| flagellar hook-basal body complex protein FliE [Achromobacter
           xylosoxidans A8]
          Length = 110

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +    T+  + +    +  E    P  F+A LQ   +        A  
Sbjct: 1   MAVSGLSGIESMLQQMRTVVSKAETGNLAAGEMVGQPDGFAAELQRSIRRVTSAQNAATA 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G    S+ + +  + +A      ++ +R+K+++A  E+S M +
Sbjct: 61  QAKAFELGAPDISLNDVMIDMQKASIGFQTAVQVRNKLVAAYKEISSMAV 110


>gi|323341387|ref|ZP_08081631.1| flagellar hook-basal body protein [Lactobacillus ruminis ATCC
           25644]
 gi|323091264|gb|EFZ33892.1| flagellar hook-basal body protein [Lactobacillus ruminis ATCC
           25644]
          Length = 104

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +   +   ++ + +      +   N+   +   SF ++L+    G   +M   +  +   
Sbjct: 1   MNSISGLENYQNQLSKITGLSDGQNQISKTDAKSFGSVLEKAIAGLNSNMNTLDQGTNGM 60

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + G ++ + + + ++ +A+ +L  ++ +R+K++ A +++  MQ
Sbjct: 61  ISGTESDLGKVMINMTEAQLSLETAVQVRNKVIEAYNDIKNMQ 103


>gi|296534149|ref|ZP_06896645.1| flagellar hook-basal body complex protein FliE [Roseomonas
           cervicalis ATCC 49957]
 gi|296265525|gb|EFH11654.1| flagellar hook-basal body complex protein FliE [Roseomonas
           cervicalis ATCC 49957]
          Length = 106

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   + G  + +S              +     ++  SF A+L+   +  +     A+  
Sbjct: 1   MSSPLPGAGAALSAYRNAAGLAS-EAPTAGNTAAAAGSFGAMLERAVEKVVDTTRAADVA 59

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  L+G+    E V  + +AE  L  ++A+RD+++SA  EV +M +
Sbjct: 60  SVQGLRGEVGATEVVLAVSRAELALQTTVAVRDRVVSAYQEVMRMSL 106


>gi|325920575|ref|ZP_08182497.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           gardneri ATCC 19865]
 gi|325548968|gb|EGD19900.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           gardneri ATCC 19865]
          Length = 123

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
             G +      +     +   SFS  L+    G     +K+  ++ A   G     +   
Sbjct: 31  ARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKSGALAKAFEMGDPSADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|167623378|ref|YP_001673672.1| flagellar hook-basal body complex subunit FliE [Shewanella
           halifaxensis HAW-EB4]
 gi|167353400|gb|ABZ76013.1| flagellar hook-basal body complex subunit FliE [Shewanella
           halifaxensis HAW-EB4]
          Length = 110

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          S    IG     T  + +   +S   F  LL             A N
Sbjct: 1   MQIGANSLLQEMQSLNGQIGTSSIQTGIARQVQNTSGSDFGQLLSQAVGNVSELQSNASN 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     G    ++ + V    ++      ++ +R+K++ A  E+  M +
Sbjct: 61  LATRLDMGDTTVTLSDTVIAREKSSVAFEATVQVRNKLVEAYKEIMSMPV 110


>gi|319649568|ref|ZP_08003724.1| flagellar hook-basal body protein [Bacillus sp. 2_A_57_CT2]
 gi|317398730|gb|EFV79412.1| flagellar hook-basal body protein [Bacillus sp. 2_A_57_CT2]
          Length = 101

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 36  SPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRD 94
           +  SFS++L+   +       +++ ++    +G    + + +    +A  T+  ++ +R+
Sbjct: 28  AQQSFSSVLKQSIEKINNAQIQSDVMTEKLAKGENVDLHQVMITSQKASITMQAALEIRN 87

Query: 95  KILSAVSEVSKMQI 108
           K++ A  E  +MQ+
Sbjct: 88  KVIEAYQEAMRMQV 101


>gi|87307390|ref|ZP_01089535.1| probable flagellar hook-basal body complex protein FliE
           [Blastopirellula marina DSM 3645]
 gi|87290130|gb|EAQ82019.1| probable flagellar hook-basal body complex protein FliE
           [Blastopirellula marina DSM 3645]
          Length = 99

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTL 86
                   S  SF+ L  +         ++A         G + +  E +  + +A+   
Sbjct: 18  TRPAGTSPSHESFTNLFMEGFSRVNEMQQQANRAVEQLQTGGEVNPSEVLIAVQKADVEF 77

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + +R+K+L A  E+  ++I
Sbjct: 78  KLMMQVRNKMLQAYQEIKDIRI 99


>gi|297569161|ref|YP_003690505.1| flagellar hook-basal body complex subunit FliE [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925076|gb|ADH85886.1| flagellar hook-basal body complex subunit FliE [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 102

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+ +      +     +G+             +    F  +L            +A ++
Sbjct: 1   MIKGMN-----LQPVMPVGVGELGVSPQPPVKDAVS-GFGEILNKAVDVVSARQAEANHL 54

Query: 62  SLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S   + G+  ++ E +  + ++  ++ L   +  K L A  E+ +MQ+
Sbjct: 55  SEGLVSGQHANIHETMIAVEKSSISMRLMTKVHQKGLDAYQEMMRMQL 102


>gi|84388110|ref|ZP_00991006.1| flagellar hook-basal body protein [Vibrio splendidus 12B01]
 gi|84377177|gb|EAP94047.1| flagellar hook-basal body protein [Vibrio splendidus 12B01]
          Length = 103

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M    +      G +    F  +L           + + ++      G    S+ + 
Sbjct: 11  QAMMVEAASARPAATGQAVGADFGNMLTQAINNVNSLQKTSGDLQARFDSGDQSVSLSDV 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R++++ +  E+  M +
Sbjct: 71  MIARNKSSVAFEATIQIRNRLVESYKELMNMPV 103


>gi|311030131|ref|ZP_07708221.1| flagellar hook-basal body protein FliE [Bacillus sp. m3-13]
          Length = 98

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            I+             +  +  G     FS  L+D           +  ++   +     
Sbjct: 1   MITKIANSNQMVQNLNSVQKTSGDVHQQFSTYLKDALNEVNNAQVASNQITTKLVNNEGV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A   ++L++ +R+K + A  E+ +MQ+
Sbjct: 61  ELHDVLIAQQKASVAMSLTMEVRNKGVEAYQEIMRMQV 98


>gi|300114784|ref|YP_003761359.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
           watsonii C-113]
 gi|299540721|gb|ADJ29038.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
           watsonii C-113]
          Length = 106

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 4/108 (3%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +E I  T           +  D   ++  E       F+AL +          +++  + 
Sbjct: 1   MESINSTQLLEQMRAATALAKDDLASATGELPEGE--FAALFRQAIDTVNQFQQQSSGLQ 58

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G     + E +    ++  +   ++ +R++++SA  E+  MQI
Sbjct: 59  TAFVRGDSNVDLAEVMIASQKSTVSFQAALQVRNRLVSAYQEIMNMQI 106


>gi|296447439|ref|ZP_06889364.1| flagellar hook-basal body complex protein FliE [Methylosinus
           trichosporium OB3b]
 gi|296255059|gb|EFH02161.1| flagellar hook-basal body complex protein FliE [Methylosinus
           trichosporium OB3b]
          Length = 107

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 57/107 (53%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI    G  S ++    +      T  S         SFS +L  +   A+  ++ +E  
Sbjct: 1   MIPLATGIVSSVAADLGVSALQGITGKSTLTPKVDGPSFSEVLGQLTTDAVDTLKSSEAT 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+AA+QGK S+++ VD +M AERTL  +IA+RDK + A  E+S+M I
Sbjct: 61  SIAAVQGKASVQQVVDQVMTAERTLQTAIAVRDKAVGAYQEISRMTI 107


>gi|306846279|ref|ZP_07478840.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
 gi|306273274|gb|EFM55143.1| flagellar hook-basal body protein FliE [Brucella sp. BO1]
          Length = 111

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSVSARNTLSRLSETVAEKGVGSASAPQAVPVAPGASFGEVLSQMTDSVGQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|207109106|ref|ZP_03243268.1| flagellar hook-basal body protein FliE [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 82

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTL 86
           + +         FS LL+          E+++        G+   + +A   I +AE ++
Sbjct: 1   SGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSM 60

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
            L + +R+K +SA  E+ + QI
Sbjct: 61  KLMLEVRNKAISAYKELLRTQI 82


>gi|77165823|ref|YP_344348.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
           oceani ATCC 19707]
 gi|254434823|ref|ZP_05048331.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
           oceani AFC27]
 gi|76884137|gb|ABA58818.1| Flagellar hook-basal body complex protein FliE [Nitrosococcus
           oceani ATCC 19707]
 gi|207091156|gb|EDZ68427.1| flagellar hook-basal body complex protein FliE [Nitrosococcus
           oceani AFC27]
          Length = 106

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 4/108 (3%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +E I  T           +  + + ++  E       F+ L +          +++  + 
Sbjct: 1   MESINSTQLLEQMRAATALAKNNSASTAGELPEGE--FATLFRQAIDSVNQFQQQSSELQ 58

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G     + E +    ++  +   ++ +R++++SA  E+  MQI
Sbjct: 59  TAFVRGDSNVDLAEVMIASQKSTVSFQAALQVRNRLVSAYQEIMNMQI 106


>gi|330502762|ref|YP_004379631.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina
           NK-01]
 gi|328917048|gb|AEB57879.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina
           NK-01]
          Length = 109

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             + +  E      SFS +L           + +  +
Sbjct: 1   MSQGVEFNRLMLEMRSMQAEAMARQKPAASEPVQGAPSFSEMLGQAVNKVNETQQASNKL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ATAFEMGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|284989557|ref|YP_003408111.1| flagellar hook-basal body complex subunit FliE [Geodermatophilus
           obscurus DSM 43160]
 gi|284062802|gb|ADB73740.1| flagellar hook-basal body complex subunit FliE [Geodermatophilus
           obscurus DSM 43160]
          Length = 109

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M   I G +   + T   G+        + +  G+    F+++L    +        ++ 
Sbjct: 1   MTSPIGGVSFPTAITGLSGVTGAAATPDAAQTTGADDNGFASVLVSSVEELQAKQSTSDG 60

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +++ A  G    + + +    +A+    + + +++K + A +E+ +M +
Sbjct: 61  LAVQAATGDLRDVHDYMIAANEAKLATEMVVTIKNKAVEAFNEIMRMPV 109


>gi|160876178|ref|YP_001555494.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS195]
 gi|217972615|ref|YP_002357366.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS223]
 gi|304409961|ref|ZP_07391580.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS183]
 gi|307302326|ref|ZP_07582084.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           BA175]
 gi|160861700|gb|ABX50234.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS195]
 gi|217497750|gb|ACK45943.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS223]
 gi|304351370|gb|EFM15769.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS183]
 gi|306914364|gb|EFN44785.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           BA175]
 gi|315268374|gb|ADT95227.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS678]
          Length = 111

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I               I   +    N   +   +S   F  LL        G    + 
Sbjct: 1   MQIGANSFLQEMQKLQGEITPSFGVQPNIMQQVNNTSGADFGQLLSQAVGNVSGLQSTSS 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           N++     G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  NLATRLEMGDTTVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|238784725|ref|ZP_04628729.1| Flagellar hook-basal body complex protein fliE [Yersinia bercovieri
           ATCC 43970]
 gi|238714404|gb|EEQ06412.1| Flagellar hook-basal body complex protein fliE [Yersinia bercovieri
           ATCC 43970]
          Length = 103

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   T  +          F++ L+          + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGTAKTLPAEA----GFASELRAAIGKISETQQHARTQAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  NFELGVPGVGLNDVMVDMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 103


>gi|332305658|ref|YP_004433509.1| flagellar hook-basal body complex subunit FliE [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172987|gb|AEE22241.1| flagellar hook-basal body complex subunit FliE [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 113

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           Q   S    +       +       +   S  +F+ +L    +        A++ +    
Sbjct: 10  QDMQSMALQSKAGLGEINPASLQGVQVNPSGENFADMLGHAIESVNSMQLDAKSQAERFE 69

Query: 67  QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G    S+ + +    ++      ++ +R+K+L A   +  M +
Sbjct: 70  MGDKSLSLADVMVAKEKSSIAFEATVQVRNKVLEAYKTIMNMPV 113


>gi|157164609|ref|YP_001467065.1| flagellar hook-basal body protein FliE [Campylobacter concisus
           13826]
 gi|112800439|gb|EAT97783.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           concisus 13826]
          Length = 97

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            ++          F   L D  K        A+        G+   + +A   I +AE +
Sbjct: 15  NSNKIAKAGEEGGFENALNDSLKELNKVQINADKAIADLATGEVKDLHQAAIAIGKAETS 74

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           + L + +R+K LSA  E+S+ QI
Sbjct: 75  MKLMLEIRNKALSAYKEISRTQI 97


>gi|322432997|ref|YP_004210246.1| flagellar hook-basal body complex subunit FliE [Acidobacterium sp.
           MP5ACTX9]
 gi|321165224|gb|ADW70928.1| flagellar hook-basal body complex subunit FliE [Acidobacterium sp.
           MP5ACTX9]
          Length = 102

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSI 90
              S    FS +L+            A       +QG    M + +  + +A+    L +
Sbjct: 25  TDPSQSGGFSDVLKGAISQVSNLEGSANQQVNRLIQGGNADMSKVMISVEKADVAFQLMM 84

Query: 91  ALRDKILSAVSEVSKMQ 107
            +R+KI+SA  ++ KMQ
Sbjct: 85  QVRNKIVSAYQDIEKMQ 101


>gi|289666080|ref|ZP_06487661.1| flagellar protein [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289670543|ref|ZP_06491618.1| flagellar protein [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 123

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
             G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 31  ARGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPSADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|239817136|ref|YP_002946046.1| flagellar hook-basal body complex subunit FliE [Variovorax
           paradoxus S110]
 gi|239803713|gb|ACS20780.1| flagellar hook-basal body complex subunit FliE [Variovorax
           paradoxus S110]
          Length = 105

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I    S +       ++    Q + E        F+A L+           KA   + 
Sbjct: 1   MSITAIESVLQQMRATALQSGIAQPAAEAAQPGG--FAAELRRSLDSISTAQTKAYGQAE 58

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
               GK   ++ + +  + +A       + +R+++++A  EV  + 
Sbjct: 59  DFEMGKPGVALNDVMVDLQKANVAFQTGLQVRNRLVAAYQEVMNLP 104


>gi|229591854|ref|YP_002873973.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
           SBW25]
 gi|259646003|sp|C3K0U6|FLIE_PSEFS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|229363720|emb|CAY51115.1| flagellar biosynthesis; basal-body component [Pseudomonas
           fluorescens SBW25]
          Length = 109

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + I+     +             ++          SF+ +L           + +  +
Sbjct: 1   MSQGIEFNRLMLDMRSMQMDAMAQPKSVAPAPELGQSSFADMLGQAINKVSDTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMVASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|322833195|ref|YP_004213222.1| flagellar hook-basal body complex subunit FliE [Rahnella sp. Y9602]
 gi|321168396|gb|ADW74095.1| flagellar hook-basal body complex subunit FliE [Rahnella sp. Y9602]
          Length = 104

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG  S +       ++        +   +S   F++ L+            A+  S 
Sbjct: 1   MSIQGIESVLQQMQATAIQAGAA---PKTDTASEAGFASELKAALGKISETQNNAKLESE 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + ++  +L L + +R+K+++A  +V  M +
Sbjct: 58  KLEMGVPGVSLNDVMVDLQKSSISLQLGVQVRNKLVAAYQDVMNMSV 104


>gi|319427072|gb|ADV55146.1| flagellar hook-basal body complex subunit FliE [Shewanella
           putrefaciens 200]
          Length = 111

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I          S    I   +  + N   +   +S   F  LL        G    + 
Sbjct: 1   MQIGANSFLQEMQSLKGEITPSFGISPNIMQQVNNTSGADFGQLLSQAVGNVSGLQSMSS 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           N++     G    S+ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  NLATRLEMGDTTVSLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|46578730|ref|YP_009538.1| flagellar basal body component FliE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603706|ref|YP_968106.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           vulgaris DP4]
 gi|46448142|gb|AAS94797.1| flagellar basal body component FliE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563935|gb|ABM29679.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           vulgaris DP4]
 gi|311232602|gb|ADP85456.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           vulgaris RCH1]
          Length = 111

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            ++   + +++               ++G +   SF+  L D          +   +  +
Sbjct: 7   GLKAYTNALANFTKAEKTTSAGAMLPQQGQAPGKSFTETLTDSLGKVNEMQGEKSKMITS 66

Query: 65  ALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
              G+T ++ E +  + +A   ++++ A+R+K++ A  E+S++Q
Sbjct: 67  FASGETQNVHELMITLQKAGLAVSMTSAVRNKVMEAYRELSRIQ 110


>gi|116619480|ref|YP_821636.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116222642|gb|ABJ81351.1| flagellar hook-basal body complex subunit FliE [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 98

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
             +    I               SS  +F  +L    +      + A       L G   
Sbjct: 1   MAAPILPISGIALPELIRPAGQPSSGGAFQDVLSGAIQRVESFSQNASTSVERFLSGENE 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +   +    QAE ++ L +  R+K++SA  E+ +M +
Sbjct: 61  EIHTTILATQQAELSMELFMQARNKVVSAYQEIMRMPM 98


>gi|292492380|ref|YP_003527819.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
           halophilus Nc4]
 gi|291580975|gb|ADE15432.1| flagellar hook-basal body complex subunit FliE [Nitrosococcus
           halophilus Nc4]
          Length = 106

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +E I  T           +  + +  +   G ++   F+ LL+          +++ ++ 
Sbjct: 1   MEPINSTQLLEQMRAAAALAENGS--ARTSGEATGNEFALLLEQALNSVNQAQQQSSDLE 58

Query: 63  LAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A + G     + E +    +A  +    + +R++++SA  E+  MQI
Sbjct: 59  TAFVLGESNVDLSEVMIASQKASVSFQAVLQVRNRLVSAYQEIMNMQI 106


>gi|83815432|ref|YP_446716.1| flagellar hook-basal body complex protein (FliE) [Salinibacter
           ruber DSM 13855]
 gi|294508651|ref|YP_003572710.1| flagellar hook-basal body complex protein fliE [Salinibacter ruber
           M8]
 gi|83756826|gb|ABC44939.1| flagellar hook-basal body complex protein (FliE) [Salinibacter
           ruber DSM 13855]
 gi|294344980|emb|CBH25758.1| Flagellar hook-basal body complex protein fliE [Salinibacter ruber
           M8]
          Length = 106

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
               +F                 N +  +   SFS  L++  +G     + A     A +
Sbjct: 4   AQLQNFRQAAIQQTDEGGGDDLPNLDEATDGPSFSDTLENAVEGVDEAQDTANEKVSAFV 63

Query: 67  QGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G+   + E +  + QA     L   +R K L A  ++ + QI
Sbjct: 64  AGEEKDLHEVMISMNQARLQFELMNEVRSKGLQAYQKLMQTQI 106


>gi|59712460|ref|YP_205236.1| flagellar hook-basal body protein FliE [Vibrio fischeri ES114]
 gi|197334488|ref|YP_002156679.1| flagellar hook-basal body complex protein FliE [Vibrio fischeri
           MJ11]
 gi|59480561|gb|AAW86348.1| flagellar hook-basal body protein FliE [Vibrio fischeri ES114]
 gi|197315978|gb|ACH65425.1| flagellar hook-basal body complex protein FliE [Vibrio fischeri
           MJ11]
          Length = 103

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
                     + +           G      FSA+         G  + + ++++   +G
Sbjct: 3   IGGLQDEMQAMMLDASN-TTRQVTGKEVGADFSAMFAKAVNNVNGLQKASSDLAVRFDRG 61

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++    + +I +R+K++ A   +  M +
Sbjct: 62  DEGVSLSDVMIARNKSSVAFDATIQVRNKLVDAYKALMNMPV 103


>gi|260886630|ref|ZP_05897893.1| flagellar hook-basal body complex protein FliE [Selenomonas
           sputigena ATCC 35185]
 gi|330839538|ref|YP_004414118.1| flagellar hook-basal body complex subunit FliE [Selenomonas
           sputigena ATCC 35185]
 gi|260863773|gb|EEX78273.1| flagellar hook-basal body complex protein FliE [Selenomonas
           sputigena ATCC 35185]
 gi|329747302|gb|AEC00659.1| flagellar hook-basal body complex subunit FliE [Selenomonas
           sputigena ATCC 35185]
          Length = 99

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
            +       ++     +  E        F   L D      G ++++E +++    G+ T
Sbjct: 2   QVEALQMTPVQMTGQSHLGETEQREVKPFHEFLTDSLGEVNGLIKESERLNMELAAGRIT 61

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + E V    +A     L++ +R++ + A  E+ +MQ+
Sbjct: 62  DVSEVVIASEKAGIATQLTMQVRNRAVEAYQEIMRMQV 99


>gi|256111944|ref|ZP_05452895.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 3
           str. Ether]
 gi|265993391|ref|ZP_06105948.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 3 str. Ether]
 gi|262764261|gb|EEZ10293.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 3 str. Ether]
          Length = 111

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSVSARNALSRLSETVAEKGVGSASAPQAVPATPGASFCEVLSQMTGSVSQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|222824066|ref|YP_002575640.1| flagellar proximal rod protein FliE [Campylobacter lari RM2100]
 gi|222539288|gb|ACM64389.1| flagellar proximal rod protein FliE [Campylobacter lari RM2100]
          Length = 97

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           ++  + I    +    +N    +    FS+LL++         E AE   +    G+   
Sbjct: 1   MNTINGINQFNNVNNKNNNNTNNIGDEFSSLLKNSINNLNKTQETAEAAMVDIATGEVKD 60

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +A   I +AE ++   + +R+K ++A  E+S+ QI
Sbjct: 61  LHQAAIAISKAESSMKFMLEVRNKAINAYKEISRTQI 97


>gi|312962277|ref|ZP_07776769.1| Flagellar hook-basal body complex protein [Pseudomonas fluorescens
           WH6]
 gi|311283614|gb|EFQ62203.1| Flagellar hook-basal body complex protein [Pseudomonas fluorescens
           WH6]
          Length = 109

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + I+     +             ++          +F+ +L           + +  +
Sbjct: 1   MSQGIEFNRLMLDMRSMQMDAMAQPKSVAPAPELGQSNFADMLGQAINKVSDTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMVASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|239996429|ref|ZP_04716953.1| Flagellar hook-basal body protein [Alteromonas macleodii ATCC
           27126]
          Length = 111

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M ++         +      ++ +  Q     E  SS   FS +L++   G  G   +++
Sbjct: 1   MDVKANSLYQEMQNMIGQTRLQVNEPQQQPLSEVNSSASDFSTMLKNAVDGVNGMQLESK 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +       G    S+ + +    +A      ++ +R+K+L A   +  M +
Sbjct: 61  DAQQRFEMGDPNLSLAQVMLTKEKAGIAFEATVQVRNKVLEAYKTIMNMPV 111


>gi|238764896|ref|ZP_04625836.1| Flagellar hook-basal body complex protein fliE [Yersinia
           kristensenii ATCC 33638]
 gi|238696915|gb|EEP89692.1| Flagellar hook-basal body complex protein fliE [Yersinia
           kristensenii ATCC 33638]
          Length = 103

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A  ++ 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSVRTLPAEA----GFASELKAAIGKISENQQTARTLAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + ++ ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  NFELGVPGVGLNDVMVNMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 103


>gi|109899353|ref|YP_662608.1| flagellar hook-basal body complex subunit FliE [Pseudoalteromonas
           atlantica T6c]
 gi|109701634|gb|ABG41554.1| flagellar hook-basal body complex subunit FliE [Pseudoalteromonas
           atlantica T6c]
          Length = 113

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 36/104 (34%), Gaps = 2/104 (1%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           Q   S    +       +    +  +   S  +F+ +L    +        A++ +    
Sbjct: 10  QDMQSMALQSKAGLGEINPASLNGIQVNPSGENFADMLGQAIESVNSMQLDAKSQAERFE 69

Query: 67  QGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G    S+ + +    ++      +I +R+K+L A   +  M +
Sbjct: 70  MGDKSLSLADVMVAKEKSSIAFEATIQVRNKVLEAYKTIMNMPV 113


>gi|21231375|ref|NP_637292.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768572|ref|YP_243334.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113038|gb|AAM41216.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573904|gb|AAY49314.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 105

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
             G +      +     +   SFS  L+    G     +K+  ++ A   G     +   
Sbjct: 13  ARGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKSGALAKAFEMGDPSADLARV 72

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 73  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 105


>gi|34498592|ref|NP_902807.1| flagellar hook-basal body protein FliE [Chromobacterium violaceum
           ATCC 12472]
 gi|34104446|gb|AAQ60804.1| flagellar hook-basal body complex protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 107

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 40/108 (37%), Gaps = 4/108 (3%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +   +  +    +        Q +     +  + FS +L+   +      + +E +  
Sbjct: 1   MSVNNIDQLLGELKSAAALASGKQ-APAAQQTPQVDFSDVLKSTIEQVNSAQQTSEEMQK 59

Query: 64  AALQGK---TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     ++++ +  + +A  +    +  R+K++SA  E+   Q+
Sbjct: 60  QFQLGDNKEVNLQDVMMSLQKASLSFQTMVQARNKLVSAYQEIMNTQV 107


>gi|94987300|ref|YP_595233.1| flagellar hook-basal body protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731549|emb|CAJ54912.1| Flagellar hook-basal body protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 115

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            ++   + +S    +   +     +  +      SF+   +D              +  +
Sbjct: 11  GLKAYTNVMSDFKKVQDTFKEKSAAIPQSKPVEKSFADTFKDSLSNVNEMQTTKSQMIQS 70

Query: 65  ALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
              G+T ++ E +  + +A   +N++ A+R+K+L A  E+S++Q
Sbjct: 71  FASGETQNVHELMITLQKAGLAINMTSAVRNKVLEAYKELSRLQ 114


>gi|17989432|ref|NP_542065.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
           str. 16M]
 gi|23499915|ref|NP_699355.1| flagellar hook-basal body protein FliE [Brucella suis 1330]
 gi|62317102|ref|YP_222955.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 1 str.
           9-941]
 gi|83269094|ref|YP_418385.1| flagellar hook-basal body protein FliE [Brucella melitensis biovar
           Abortus 2308]
 gi|161620235|ref|YP_001594121.1| flagellar hook-basal body protein FliE [Brucella canis ATCC 23365]
 gi|163844345|ref|YP_001622000.1| flagellar hook-basal body protein FliE [Brucella suis ATCC 23445]
 gi|189022367|ref|YP_001932108.1| flagellar hook-basal body protein FliE [Brucella abortus S19]
 gi|225628624|ref|ZP_03786658.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
 gi|225686011|ref|YP_002733983.1| flagellar hook-basal body protein FliE [Brucella melitensis ATCC
           23457]
 gi|237816664|ref|ZP_04595656.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
           A]
 gi|254691413|ref|ZP_05154667.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 6 str.
           870]
 gi|254695289|ref|ZP_05157117.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698387|ref|ZP_05160215.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699460|ref|ZP_05161288.1| flagellar hook-basal body protein FliE [Brucella suis bv. 5 str.
           513]
 gi|254702575|ref|ZP_05164403.1| flagellar hook-basal body protein FliE [Brucella suis bv. 3 str.
           686]
 gi|254706293|ref|ZP_05168121.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
           M163/99/10]
 gi|254711413|ref|ZP_05173224.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
           B2/94]
 gi|254712012|ref|ZP_05173823.1| flagellar hook-basal body protein FliE [Brucella ceti M644/93/1]
 gi|254715081|ref|ZP_05176892.1| flagellar hook-basal body protein FliE [Brucella ceti M13/05/1]
 gi|254731832|ref|ZP_05190410.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 4 str.
           292]
 gi|256014941|ref|YP_003104950.1| flagellar basal body protein [Brucella microti CCM 4915]
 gi|256029957|ref|ZP_05443571.1| flagellar hook-basal body protein FliE [Brucella pinnipedialis
           M292/94/1]
 gi|256043072|ref|ZP_05446016.1| flagellar hook-basal body protein FliE [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256158119|ref|ZP_05456037.1| flagellar hook-basal body protein FliE [Brucella ceti M490/95/1]
 gi|256252927|ref|ZP_05458463.1| flagellar hook-basal body protein FliE [Brucella ceti B1/94]
 gi|256256599|ref|ZP_05462135.1| flagellar hook-basal body protein FliE [Brucella abortus bv. 9 str.
           C68]
 gi|256262866|ref|ZP_05465398.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 2 str. 63/9]
 gi|260544340|ref|ZP_05820161.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           NCTC 8038]
 gi|260564302|ref|ZP_05834787.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 1 str. 16M]
 gi|260568517|ref|ZP_05838986.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
           str. 40]
 gi|260757027|ref|ZP_05869375.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 6 str. 870]
 gi|260759601|ref|ZP_05871949.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 4 str. 292]
 gi|260762845|ref|ZP_05875177.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882837|ref|ZP_05894451.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 9 str. C68]
 gi|261215658|ref|ZP_05929939.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 3 str. Tulya]
 gi|261216791|ref|ZP_05931072.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M13/05/1]
 gi|261220018|ref|ZP_05934299.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           B1/94]
 gi|261313737|ref|ZP_05952934.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis M163/99/10]
 gi|261319021|ref|ZP_05958218.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis B2/94]
 gi|261319658|ref|ZP_05958855.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M644/93/1]
 gi|261749911|ref|ZP_05993620.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
           str. 513]
 gi|261753155|ref|ZP_05996864.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
           str. 686]
 gi|265986976|ref|ZP_06099533.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis M292/94/1]
 gi|265989510|ref|ZP_06102067.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265996636|ref|ZP_06109193.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M490/95/1]
 gi|294853174|ref|ZP_06793846.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
           07-0026]
 gi|297249955|ref|ZP_06933656.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 5 str. B3196]
 gi|54037112|sp|P67707|FLIE_BRUSU RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|54041063|sp|P67706|FLIE_BRUME RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|75495902|sp|Q579U0|FLIE_BRUAB RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|123545537|sp|Q2YJ71|FLIE_BRUA2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|189044491|sp|A9MDR2|FLIE_BRUC2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|189044492|sp|A9WXL2|FLIE_BRUSI RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704222|sp|B2SCV8|FLIE_BRUA1 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|254789305|sp|C0RK96|FLIE_BRUMB RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|17985309|gb|AAL54329.1| flagellar hook-basal body complex protein flie [Brucella melitensis
           bv. 1 str. 16M]
 gi|23463492|gb|AAN33360.1| flagellar hook-basal body complex protein FliE [Brucella suis 1330]
 gi|62197295|gb|AAX75594.1| FliE, flagellar hook-basal body complex protein [Brucella abortus
           bv. 1 str. 9-941]
 gi|82939368|emb|CAJ12316.1| Flagellar hook-basal body complex protein FliE [Brucella melitensis
           biovar Abortus 2308]
 gi|161337046|gb|ABX63350.1| Hypothetical protein BCAN_B0154 [Brucella canis ATCC 23365]
 gi|163675068|gb|ABY39178.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189020941|gb|ACD73662.1| Flagellar hook-basal body complex protein FliE [Brucella abortus
           S19]
 gi|225616470|gb|EEH13518.1| flagellar hook-basal body protein FliE [Brucella ceti str. Cudo]
 gi|225642116|gb|ACO02029.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|237787477|gb|EEP61693.1| flagellar hook-basal body protein FliE [Brucella abortus str. 2308
           A]
 gi|255997601|gb|ACU49288.1| flagellar basal body protein [Brucella microti CCM 4915]
 gi|260097611|gb|EEW81485.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           NCTC 8038]
 gi|260151945|gb|EEW87038.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 1 str. 16M]
 gi|260155182|gb|EEW90263.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 4
           str. 40]
 gi|260669919|gb|EEX56859.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 4 str. 292]
 gi|260673266|gb|EEX60087.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260677135|gb|EEX63956.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 6 str. 870]
 gi|260872365|gb|EEX79434.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 9 str. C68]
 gi|260917265|gb|EEX84126.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 3 str. Tulya]
 gi|260918602|gb|EEX85255.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           B1/94]
 gi|260921880|gb|EEX88448.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M13/05/1]
 gi|261292348|gb|EEX95844.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M644/93/1]
 gi|261298244|gb|EEY01741.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis B2/94]
 gi|261302763|gb|EEY06260.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis M163/99/10]
 gi|261739664|gb|EEY27590.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 5
           str. 513]
 gi|261742908|gb|EEY30834.1| flagellar hook-basal body complex protein fliE [Brucella suis bv. 3
           str. 686]
 gi|262550933|gb|EEZ07094.1| flagellar hook-basal body complex protein fliE [Brucella ceti
           M490/95/1]
 gi|263000179|gb|EEZ12869.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263092701|gb|EEZ16910.1| flagellar hook-basal body complex protein fliE [Brucella melitensis
           bv. 2 str. 63/9]
 gi|264659173|gb|EEZ29434.1| flagellar hook-basal body complex protein fliE [Brucella
           pinnipedialis M292/94/1]
 gi|294818829|gb|EFG35829.1| flagellar hook-basal body complex protein fliE [Brucella sp. NVSL
           07-0026]
 gi|297173824|gb|EFH33188.1| flagellar hook-basal body complex protein fliE [Brucella abortus
           bv. 5 str. B3196]
 gi|326410334|gb|ADZ67398.1| flagellar hook-basal body protein FliE [Brucella melitensis M28]
 gi|326553626|gb|ADZ88265.1| flagellar hook-basal body protein FliE [Brucella melitensis M5-90]
          Length = 111

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I  +   N+    ++T+  +   + ++ +    +   SF  +L  M       ++ AE  
Sbjct: 5   IMSVSARNALSRLSETVAEKGVGSASAPQAVPAAPGASFGEVLSQMTGSVSQKLQAAEAT 64

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+  ++G   +R+ V  +M+AE++L  +IA+RDKI+ A  E+S+M I
Sbjct: 65  SIQGIKGDAPVRDVVSSVMEAEQSLQTAIAIRDKIVQAYLEISRMPI 111


>gi|182418391|ref|ZP_02949686.1| flagellar hook-basal body complex protein [Clostridium butyricum
           5521]
 gi|237666872|ref|ZP_04526857.1| flagellar hook-basal body complex protein FliE [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377773|gb|EDT75317.1| flagellar hook-basal body complex protein [Clostridium butyricum
           5521]
 gi|237658071|gb|EEP55626.1| flagellar hook-basal body complex protein FliE [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 102

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNL 88
           N    ++  +F   L+    G    + ++++ + + ++G   ++ E +    +A   L  
Sbjct: 23  NTTQTTNEKTFGNALKKAIDGTNEKLVESDSATNSFIRGDDINIDEVMVKNQEASLCLQF 82

Query: 89  SIALRDKILSAVSEVSKMQI 108
               RDK+L     +SK+Q+
Sbjct: 83  LTQTRDKLLEGYETLSKLQL 102


>gi|163789651|ref|ZP_02184089.1| hypothetical protein CAT7_09415 [Carnobacterium sp. AT7]
 gi|159875183|gb|EDP69249.1| hypothetical protein CAT7_09415 [Carnobacterium sp. AT7]
          Length = 106

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 1/103 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +    + +    T        +  + E  +   SFS +L++           A+      
Sbjct: 3   VDALFNSLVSGPTQTGVTGGLKEQSAEAATGSASFSNMLENAMGSLNDQQVAADQGVQGL 62

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + G T  +   +    +A+ +L L++ LR+K L A +E+  MQ
Sbjct: 63  ITGNTDNLHSVMIQTSEAQLSLELALQLRNKGLEAYNEIKNMQ 105


>gi|146282930|ref|YP_001173083.1| flagellar hook-basal body protein FliE [Pseudomonas stutzeri A1501]
 gi|166214855|sp|A4VMP0|FLIE_PSEU5 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|145571135|gb|ABP80241.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           stutzeri A1501]
 gi|327481270|gb|AEA84580.1| flagellar hook-basal body protein FliE [Pseudomonas stutzeri DSM
           4166]
          Length = 109

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + +Q     +            ++   +       SFS +L           + +  +
Sbjct: 1   MSQGVQFNRLMLEMRAMQTDAMARSKPEVQTQEVGAPSFSDMLGQAVNKVHETQQVSSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + E +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ASAFEMGQGGVDLTEVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|309779485|ref|ZP_07674246.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
           5_7_47FAA]
 gi|308921726|gb|EFP67362.1| flagellar hook-basal body complex protein FliE [Ralstonia sp.
           5_7_47FAA]
          Length = 113

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            +    + +    +         +++ +G    + F A+L+          +KAE++S +
Sbjct: 8   SVVSLMNSVLSPSSTVGGIGSGGSTSGDGAKVSVDFGAVLKSSLDRVDASQQKAESISRS 67

Query: 65  ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G     + + +  + +A   +  ++ +R+K +SA   +  M I
Sbjct: 68  FEMGNNDVDLHDVMLSLQKANIDMQTAVQVRNKFVSAYQSIMSMSI 113


>gi|153951288|ref|YP_001398446.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938734|gb|ABS43475.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 97

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            N ++        F+ +L++         E  E        G+   + +A   I +AE +
Sbjct: 15  TNKSQNSTGIGNEFAKMLKNEIDDFNKAQESGEAAMTDIATGRVKDLHQAAIAITKAESS 74

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +   + +R+K +SA  E+ + QI
Sbjct: 75  MKFMLEVRNKAISAYKEIIRTQI 97


>gi|84624116|ref|YP_451488.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84368056|dbj|BAE69214.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 105

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   SFS  L+    G     ++A  +S A   G     +   
Sbjct: 13  ARGNQIQGLAGAQGTPATQASSFSETLRSAIGGVNEAQQRAGALSKAFEMGDPNADLARV 72

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 73  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 105


>gi|15964414|ref|NP_384767.1| flagellar hook-basal body protein FliE [Sinorhizobium meliloti
           1021]
 gi|307311556|ref|ZP_07591197.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
           meliloti BL225C]
 gi|307318911|ref|ZP_07598342.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
           meliloti AK83]
 gi|17380479|sp|Q52945|FLIE_RHIME RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|15073591|emb|CAC45233.1| Flagellar hook-basal body complex protein [Sinorhizobium meliloti
           1021]
 gi|306895325|gb|EFN26080.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
           meliloti AK83]
 gi|306899573|gb|EFN30202.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
           meliloti BL225C]
          Length = 111

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIG----MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           MI+ IQ   +F +  +T G                      SF+ +L +M   AI  M+ 
Sbjct: 1   MIDAIQSVGAFSTIRETEGAGPAPSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60

Query: 58  AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE  SL A++G+ + RE VD +M AE++L  +IA+RDK+++A  E+++MQI
Sbjct: 61  AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111


>gi|229544392|ref|ZP_04433450.1| flagellar hook-basal body complex subunit FliE [Bacillus coagulans
           36D1]
 gi|229324877|gb|EEN90554.1| flagellar hook-basal body complex subunit FliE [Bacillus coagulans
           36D1]
          Length = 103

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
                                      +  +SFS LL+            ++ +      
Sbjct: 2   AVQPISQTPSASFSGLSPKSAGAASSANGSVSFSDLLKQSVNELNKQQNNSDTMITKLSN 61

Query: 68  G-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    + + +  + +A  ++  ++ +R+K +    E+ +MQ+
Sbjct: 62  GENVDLYQVMVAVQKANLSMQTALEVRNKAVEGYKEMMQMQV 103


>gi|330445365|ref|ZP_08309017.1| flagellar hook-basal body complex protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489556|dbj|GAA03514.1| flagellar hook-basal body complex protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 103

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +              +S          F  LL D  K       ++  ++ 
Sbjct: 1   MKVNGLQAEMQAMR----LDAQNTSSPVTAQQVSADFGNLLSDALKTVNHLQGQSSELAT 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              QG    S+ + +    ++      ++ +R+K++ A  E+  M +
Sbjct: 57  RFDQGDRSVSLSDVMIARNKSSVAFEATVQVRNKMVQAYKELMNMPV 103


>gi|262276396|ref|ZP_06054205.1| flagellar hook-basal body complex protein FliE [Grimontia hollisae
           CIP 101886]
 gi|262220204|gb|EEY71520.1| flagellar hook-basal body complex protein FliE [Grimontia hollisae
           CIP 101886]
          Length = 103

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
                    T+ +           G      F  LL        G  + +  ++    QG
Sbjct: 3   ITPMQHEMQTMALEAQN-TARAATGQQVSQDFGKLLSTAINHVNGMQKTSGELATRFDQG 61

Query: 69  --KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ + +    ++      ++  R+K++ A  E+  M +
Sbjct: 62  DRNVSLSDVMIARNKSSVAFEATVQTRNKLVEAYKELMNMPV 103


>gi|310641542|ref|YP_003946300.1| flagellar hook-basal body complex subunit flie [Paenibacillus
           polymyxa SC2]
 gi|309246492|gb|ADO56059.1| Flagellar hook-basal body complex subunit FliE [Paenibacillus
           polymyxa SC2]
          Length = 104

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 38/103 (36%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           IQ     +       ++    + +      S   F + L+D              +S   
Sbjct: 2   IQNAMFNVQTPVIQQIQSPNNELTKATPSESLKDFGSFLKDALNEVGQQEAATHQMSDQF 61

Query: 66  LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + GK  + + +    QA  +L L+  +R+K + A  E+ + Q+
Sbjct: 62  MAGKVDVDQVMITSQQALLSLQLTTQVRNKAIEAYQEIMRTQM 104


>gi|163733140|ref|ZP_02140584.1| flagellar hook-basal body complex protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393675|gb|EDQ18000.1| flagellar hook-basal body complex protein, putative [Roseobacter
           litoralis Och 149]
          Length = 108

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 45/108 (41%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M ++ +    +F +   T  +          E      S S  +  +AK     + ++E 
Sbjct: 1   MDMKAVSAIQNFTNARATSAIESYQQARPATEPFPEESSASETMGRVAKDFAATLAESEE 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ +++ G       V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 61  IAKSSMVGDADPHALVQALAQTELAVEAAVRVRNKVVEAYQEILRMPV 108


>gi|254246926|ref|ZP_04940247.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           cenocepacia PC184]
 gi|124871702|gb|EAY63418.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           cenocepacia PC184]
          Length = 126

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE-----GGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +    ++  +      S        G ++  +F++ ++       GD +
Sbjct: 13  MTANVSGIGSVLQQMQSMAAQASGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 72

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 73  HALGEAKAFEVGAPNISLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 126


>gi|269139485|ref|YP_003296186.1| flagellar hook-basal body protein [Edwardsiella tarda EIB202]
 gi|267985146|gb|ACY84975.1| flagellar hook-basal body protein [Edwardsiella tarda EIB202]
 gi|304559375|gb|ADM42039.1| Flagellar hook-basal body complex protein FliE [Edwardsiella tarda
           FL6-60]
          Length = 104

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             + G  + +       +        +     +  +FS+ L+        +   A   + 
Sbjct: 1   MAVTGIENVLQQLQATALSAANRTPQDG---VAQGTFSSELKSAIDRISDNQNHARLQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  +L + I +R+++++A  ++  MQ+
Sbjct: 58  QFEMGVPGVALNDVMLDMQKSSVSLQMGIQVRNRLVAAYQDIMNMQV 104


>gi|238751781|ref|ZP_04613269.1| Flagellar hook-basal body complex protein fliE [Yersinia rohdei
           ATCC 43380]
 gi|238710052|gb|EEQ02282.1| Flagellar hook-basal body complex protein fliE [Yersinia rohdei
           ATCC 43380]
          Length = 105

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 42/109 (38%), Gaps = 6/109 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +QG    +       ++   +  +          F+  L+        + + A  +
Sbjct: 1   MSMSVQGIEGVLQQLQVTALQASNSAKTLPVEA----GFATELKAAIGKISDNQQTARTL 56

Query: 62  SLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +     G     + + + ++ ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  AQNFELGVPGVGLNDVMVNMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 105


>gi|325918318|ref|ZP_08180455.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325535458|gb|EGD07317.1| flagellar hook-basal body complex protein FliE [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 123

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   SFS  L+    G     +KA  +S A   G     +   
Sbjct: 31  ARGNQIQGLAGAQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPNADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|70729029|ref|YP_258763.1| flagellar hook-basal body protein FliE [Pseudomonas fluorescens
           Pf-5]
 gi|123657113|sp|Q4KG70|FLIE_PSEF5 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|68343328|gb|AAY90934.1| flagellar hook-basal body complex protein (FliE) [Pseudomonas
           fluorescens Pf-5]
          Length = 108

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N  +     + M       S      S  SF+ +L           + +  +S A   G
Sbjct: 7   FNRLMLDMRAMQMDAMSQPKSAAVAEVSGSSFADMLGQAVNKVNDTQQASNQLSSAFEIG 66

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 67  KSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 108


>gi|157961188|ref|YP_001501222.1| flagellar hook-basal body complex subunit FliE [Shewanella pealeana
           ATCC 700345]
 gi|157846188|gb|ABV86687.1| flagellar hook-basal body complex subunit FliE [Shewanella pealeana
           ATCC 700345]
          Length = 110

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          S    IG     T  + +   +S   FS LL             A N
Sbjct: 1   MQIGANSLLQEMQSLNGQIGTSSIQTGITRQVQNTSGSDFSQLLSQAVGNVSELQSNAAN 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     G    ++ + V    ++      ++ +R+K++ A  E+  M +
Sbjct: 61  LATRLDMGDTTVTLSDTVIAREKSSVAFEATVQVRNKLVEAYKEIMSMPV 110


>gi|261344119|ref|ZP_05971763.1| flagellar hook-basal body complex protein FliE [Providencia
           rustigianii DSM 4541]
 gi|282567710|gb|EFB73245.1| flagellar hook-basal body complex protein FliE [Providencia
           rustigianii DSM 4541]
          Length = 103

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ     +S  + +  +         +    P+ F+  L            K+     
Sbjct: 1   MTIQAIEGVVSQLNVVATQATNH----AKPVIDPVGFADHLVASVNQINEVRTKSTQNVQ 56

Query: 64  AALQGKTSM--REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK  +   + +  + +A  +L + I +R+K+++A  E+  M +
Sbjct: 57  DFTMGKPDLSLNDVMVDMQKASLSLQMGIQVRNKLVAAYQEIMSMPV 103


>gi|254474738|ref|ZP_05088124.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
           sp. R11]
 gi|214028981|gb|EEB69816.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
           sp. R11]
          Length = 98

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 39/96 (40%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I               +  +   +  S +A ++   +     ++++E  S+ A+ G    
Sbjct: 3   IRSLSATSGYAAARPATKIDPEHTATSPTARIKASFEEFNNTLQQSEQTSVTAMTGNGDP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|73538921|ref|YP_299288.1| flagellar hook-basal body complex protein FliE [Ralstonia eutropha
           JMP134]
 gi|123622517|sp|Q46QZ0|FLIE_CUPPJ RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|72122258|gb|AAZ64444.1| Flagellar hook-basal body complex protein FliE [Ralstonia eutropha
           JMP134]
          Length = 107

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +      +     +      T +      +S       LQ          E+A  +S
Sbjct: 1   MTTLSPIEGMLQQLRGLAQTAAGTSSQAAAPAASGGFAGE-LQRSLSRINATQERAYGLS 59

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   GK   ++ + +  + +A  +    + +R++++ A  E+  M +
Sbjct: 60  EAFELGKPGVALNDVMIELQKANVSFQTGVQVRNRLVQAYQEMMNMPV 107


>gi|152965615|ref|YP_001361399.1| flagellar hook-basal body complex subunit FliE [Kineococcus
           radiotolerans SRS30216]
 gi|151360132|gb|ABS03135.1| flagellar hook-basal body complex subunit FliE [Kineococcus
           radiotolerans SRS30216]
          Length = 145

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAE 83
              ++    G+S   F++LL        G   +++++++ A  G  T++ + +    +A+
Sbjct: 61  GAGSATAVEGTSGTDFASLLSGGLDKLQGMQSRSDDLAVKAATGDLTNVHDYMIASNEAQ 120

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
               L+ A+R+K + A +E+ +MQ+
Sbjct: 121 LATQLTTAIRNKAVDAFNEIMRMQV 145


>gi|261885798|ref|ZP_06009837.1| flagellar hook-basal body protein FliE [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 95

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
           + T    ++   +   FS +L           EKA+        G+   + +A   I +A
Sbjct: 10  NQTTEQTKQKDGAGSGFSDMLNKALSDLNDVQEKADKAVADLATGEVKDLHQAAIAIGKA 69

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E ++ L + +R+K ++A  E+S+ Q+
Sbjct: 70  ETSMRLMLEVRNKAINAYKEISRTQL 95


>gi|260772322|ref|ZP_05881238.1| flagellar hook-basal body complex protein FliE [Vibrio
           metschnikovii CIP 69.14]
 gi|260611461|gb|EEX36664.1| flagellar hook-basal body complex protein FliE [Vibrio
           metschnikovii CIP 69.14]
          Length = 94

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
              M           G      FS +L        G  + + N+     +G    S+ + 
Sbjct: 2   QAMMAEAANARPAATGQKVGADFSQMLTQAINTVNGLQQSSSNLQTRFDRGDEGISLSDV 61

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++      +I +R+K++ A  E+  M +
Sbjct: 62  MIARNKSSVAFEATIQVRNKLVDAYKELMNMPV 94


>gi|323527691|ref|YP_004229844.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1001]
 gi|323384693|gb|ADX56784.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1001]
          Length = 116

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q  +S  +              + E G ++   F++ L+       GD  KA   S 
Sbjct: 10  SALQQLHSMAAAAAGGSTAATGASAAGESGAATAGGFASALKASLDKISGDQNKAVGESK 69

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   G    S+ + +  + +A       + +R+K+++A +++ +MQ+
Sbjct: 70  AFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVTAYNDIMQMQV 116


>gi|332161343|ref|YP_004297920.1| flagellar hook-basal body protein FliE [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325665573|gb|ADZ42217.1| flagellar hook-basal body protein FliE [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 105

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +QG    +       ++   +  +          F++ L+        + + A  +
Sbjct: 1   MSMSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFASELKAAIGKISENQQTARTL 56

Query: 62  SLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +     G     + + + ++ ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  AQNFELGVPGVGINDVMVNMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 105


>gi|86750884|ref|YP_487380.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           HaA2]
 gi|86573912|gb|ABD08469.1| flagellar hook-basal body complex protein FliE subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 101

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   I   N++ S                 +   +  SF AL++D     +    K++  
Sbjct: 1   MASPISAANAYASLARLANP------GGAGKPTDNGPSFGALVKDAMGSVLDAGRKSDAQ 54

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A   GK+++ + V  + + +  ++  +++RD+++ +  E+ +MQI
Sbjct: 55  TVAMANGKSNVMDVVTAVAETDVAVSTLVSVRDRVIQSYEEILRMQI 101


>gi|294664058|ref|ZP_06729460.1| flagellar hook-basal body complex protein FliE [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292606161|gb|EFF49410.1| flagellar hook-basal body complex protein FliE [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 123

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   +FS  L+    G     +KA  +S A   G     +   
Sbjct: 31  ARGNQIQGLAGTQGTPATQAPTFSETLRGAIGGVNEAQQKAGALSKAFEMGDPNADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|148256778|ref|YP_001241363.1| flagellar hook-basal body protein FliE [Bradyrhizobium sp. BTAi1]
 gi|146408951|gb|ABQ37457.1| Flagellar hook-basal body complex protein FliE [Bradyrhizobium sp.
           BTAi1]
          Length = 118

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
           T    +   ++    D   N N        SFSA+L+D     +    K+++ ++A   G
Sbjct: 20  TGGSSNAFGSLARVRDVLGNGNGADK-GGPSFSAVLKDAIGSVMETGRKSDSQAVAMAAG 78

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K ++ + V  + + +  ++  +++RD+++ A  +V KM I
Sbjct: 79  KANVMDVVTAVAETDVAVSTLVSVRDRVIQAYEDVMKMTI 118


>gi|302037603|ref|YP_003797925.1| flagellar hook-basal body complex protein FliE [Candidatus
           Nitrospira defluvii]
 gi|300605667|emb|CBK42000.1| Flagellar hook-basal body complex protein FliE [Candidatus
           Nitrospira defluvii]
          Length = 103

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 39  SFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKIL 97
           +F   L++           A     A + G+ T++ + +  + QA+ +  L + +R+K++
Sbjct: 33  NFMGSLKEAIGHINDAQTGASQAVDALVTGQSTNIHQTMVALQQADVSFQLMMQVRNKLV 92

Query: 98  SAVSEVSKMQI 108
           +A  E+ +MQI
Sbjct: 93  TAYEEIQRMQI 103


>gi|284007154|emb|CBA72436.1| flagellar hook-basal body protein FliE [Arsenophonus nasoniae]
          Length = 103

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I    S I+           ++NS     ++   F++ L +           A   + 
Sbjct: 1   MSIPAIQSVIAQM----TTDMVSKNSIPLTATAQSGFASHLINAVGKINQTRVTASQKAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A    K    + + +  + +A  +L   I +R+K++ A  E+  M +
Sbjct: 57  ALTLEKPGVELNDVMVDLQKASLSLQFGIQVRNKLVGAYQEIMNMPV 103


>gi|94314178|ref|YP_587387.1| flagellar hook-basal body complex protein FliE [Cupriavidus
           metallidurans CH34]
 gi|93358030|gb|ABF12118.1| flagellar hook-basal body complex protein (FliE) [Cupriavidus
           metallidurans CH34]
          Length = 106

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 3/107 (2%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I      +               + +E  ++  SF+  LQ   +      ++A   + 
Sbjct: 1   MTISSIEGMLQQMRATAQVAGGG-AAPQEASAATESFAGELQRSLQRLNATQDRAYGKAE 59

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK   S+ + +  + +A  +   ++ +R+++ +A  E+  M +
Sbjct: 60  AFEMGKAGVSLNDVMIDMQKANISFQTAVQVRNRLTAAYQEMMNMPV 106


>gi|168698711|ref|ZP_02730988.1| flagellar hook-basal body complex protein (FliE) [Gemmata
           obscuriglobus UQM 2246]
          Length = 103

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            +S  +      ++      +  +       F+ +L  +  G I     A+    +   G
Sbjct: 3   VDSIATVAPLSRLQPLLAPQAPADLTPGGAPFAGVLNSVLNGNIEANRGADAAVQSLATG 62

Query: 69  KT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   +      + QA+ +  L + LR+++  A  EV++MQ+
Sbjct: 63  EAQDLHTVSLAVAQADLSFRLILELRNRLTDAFQEVTRMQV 103


>gi|307731341|ref|YP_003908565.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1003]
 gi|307585876|gb|ADN59274.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1003]
          Length = 116

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q  +S  +              + E G ++   F++ L+       GD  KA   S 
Sbjct: 10  SALQQLHSMAAQAAGGSTAASGAPAAGESGAATAGGFASALKASLDKISGDQTKAIGESQ 69

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   G    S+ + +  + +A       + +R+K++SA +++ +MQ+
Sbjct: 70  AFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMQV 116


>gi|308068651|ref|YP_003870256.1| flagellar hook-basal body complex protein fliE [Paenibacillus
           polymyxa E681]
 gi|305857930|gb|ADM69718.1| Flagellar hook-basal body complex protein fliE [Paenibacillus
           polymyxa E681]
          Length = 104

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 38/103 (36%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           IQ     +       ++    + +      S   F + L+D              +S   
Sbjct: 2   IQNAMFNVQAPVIQQVQSPNNELTKATPSESLKDFGSFLKDALNEVGQQEAATHQISDQF 61

Query: 66  LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + GK  + + +    QA  +L L+  +R+K + A  E+ + Q+
Sbjct: 62  MAGKVDVDQVMITSQQALLSLQLTTQIRNKAIEAYQEIMRTQM 104


>gi|32266908|ref|NP_860940.1| flagellar hook-basal body protein FliE [Helicobacter hepaticus ATCC
           51449]
 gi|38502918|sp|Q7VGB3|FLIE_HELHP RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|32262960|gb|AAP78006.1| flagellar hook-basal body protein FliE [Helicobacter hepaticus ATCC
           51449]
          Length = 103

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALR 93
              + F   L+D  +    + + +E        G+   + +A   I +AE ++ + + +R
Sbjct: 29  QDGLDFIKTLKDSIQDVNTEQQTSEKALADIASGQVKDLHQAAIAINRAENSMKVMLEVR 88

Query: 94  DKILSAVSEVSKMQI 108
           +K ++A  E+ + QI
Sbjct: 89  NKAINAYKEILRTQI 103


>gi|54308115|ref|YP_129135.1| flagellar hook-basal body protein FliE [Photobacterium profundum
           SS9]
 gi|46912541|emb|CAG19333.1| Putative flagellar hook-basal body protein [Photobacterium
           profundum SS9]
          Length = 103

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N   +    +G+      +    G      F AL  D  K       ++ ++S    Q
Sbjct: 2   NVNGLQAEMQAMGLEAQN-TSRPATGQQVSADFGALFNDAVKSVNQLQSQSSDLSTRFDQ 60

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    S+ + +    ++      ++ +R+K++ A  ++  M +
Sbjct: 61  GDHSVSLSDVMIARNKSSVAFEATVQVRNKMVEAYKQLMNMPV 103


>gi|89069821|ref|ZP_01157156.1| putative flagellar hook-basal body complex protein [Oceanicola
           granulosus HTCC2516]
 gi|89044622|gb|EAR50738.1| putative flagellar hook-basal body complex protein [Oceanicola
           granulosus HTCC2516]
          Length = 94

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 40/91 (43%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
              +  +  + +       P +  + +  +A   +  +  +E  ++AA+ G       V 
Sbjct: 4   PSSLVANAYETNRAATAPGPDAGGSPVGQLADDFLATLRASEETAMAAMTGDADPHALVQ 63

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + Q E  L  ++A+R+K++ A  E+ +M +
Sbjct: 64  ALAQTELALEAAVAVRNKVVEAYQEILRMPV 94


>gi|154686036|ref|YP_001421197.1| flagellar hook-basal body protein FliE [Bacillus amyloliquefaciens
           FZB42]
 gi|308173582|ref|YP_003920287.1| flagellar basal body protein [Bacillus amyloliquefaciens DSM 7]
 gi|154351887|gb|ABS73966.1| FliE [Bacillus amyloliquefaciens FZB42]
 gi|307606446|emb|CBI42817.1| flagellar basal body protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553486|gb|AEB23978.1| flagellar hook-basal body protein FliE [Bacillus amyloliquefaciens
           TA208]
 gi|328911723|gb|AEB63319.1| Flagellar hook-basal body complex protein fliE [Bacillus
           amyloliquefaciens LL3]
          Length = 106

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIM 80
             +    + +   S+  SFS LL++          K++ ++     G   ++ E +    
Sbjct: 19  VTNQLNQTQKTDSSNQTSFSELLKNSIDSLNESQVKSDQITNELAAGKDVNLDEVMIAAQ 78

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A  +L  +   R+K + A  E+ +MQ+
Sbjct: 79  KANISLTAATEFRNKAVEAYQEIMRMQM 106


>gi|153001453|ref|YP_001367134.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS185]
 gi|151366071|gb|ABS09071.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS185]
          Length = 111

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQN-SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M I               I   +    N   +   +S   F  LL        G    + 
Sbjct: 1   MQIGANSFLQEMQKLQGEITPSFGVQPNIMQQVNNTSSADFGQLLSQAVGNVSGLQSTSS 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           N++     G    ++ + V    +A      ++ +R+K++ A  E+  M +
Sbjct: 61  NLATRLEMGDTTVTLSDTVIAREKASVAFEATVQVRNKLVEAYKEIMSMPV 111


>gi|118474123|ref|YP_891879.1| flagellar hook-basal body protein FliE [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118413349|gb|ABK81769.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 95

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
           + T    ++   +   FS +L           EKA+        G+   + +A   I +A
Sbjct: 10  NQTTEQTKQKDGAGSGFSDMLNKALSDLNDVQEKADKAVADLATGEVKDLHQAAIAIGKA 69

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E ++ L + +R+K ++A  E+S+ Q+
Sbjct: 70  ETSMKLMLEVRNKAINAYKEISRTQL 95


>gi|238920309|ref|YP_002933824.1| flagellar hook-basal body complex protein FliE, [Edwardsiella
           ictaluri 93-146]
 gi|259646001|sp|C5BAA9|FLIE_EDWI9 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|238869878|gb|ACR69589.1| flagellar hook-basal body complex protein FliE, putative
           [Edwardsiella ictaluri 93-146]
          Length = 104

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             + G  + +       +        +     +  +FS+ L+        +   A   + 
Sbjct: 1   MAVTGIENVLQQLQATALSAANGTPQDG---VAQGTFSSELKAAIDRISDNQNHARLQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  +L + + +R+++++A  ++  MQ+
Sbjct: 58  QFEMGVPGVALNDVMLDMQKSSVSLQMGVQVRNRLVAAYQDIMNMQV 104


>gi|51246507|ref|YP_066391.1| flagellar hook-basal body complex protein (FliE) [Desulfotalea
           psychrophila LSv54]
 gi|50877544|emb|CAG37384.1| related to flagellar hook-basal body complex protein (FliE)
           [Desulfotalea psychrophila LSv54]
          Length = 98

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
            I       +    T +  +    +  +F+ ++ +    A    +  +    A   GK  
Sbjct: 1   MIPEIRAQQVALAATDSMPQNISKAGRTFAEVIAETVNQANKAQDVGDKSIQALESGKAQ 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ E +  + +A+ +L + + +R+K LSA  E+ +MQ+
Sbjct: 61  NLHEVMISMEEADISLRMLVQVRNKALSAYDEIMRMQV 98


>gi|295098293|emb|CBK87383.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 104

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +S      M     +N +       +SF+  L             A   + 
Sbjct: 1   MAIQGIEGVLSQLQATAMTA---RNQSVADQPPGVSFAGQLHAALDRISDKQNAARTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++ + +  + +A  +L + + +R+K++SA  EV  MQ+
Sbjct: 58  RFTLGEPGVALNDVMADLQKASVSLQMGLQVRNKLVSAYQEVMGMQV 104


>gi|254499114|ref|ZP_05111804.1| putative flagellar hook-basal body complex protein (FliE)
           [Legionella drancourtii LLAP12]
 gi|254351653|gb|EET10498.1| putative flagellar hook-basal body complex protein (FliE)
           [Legionella drancourtii LLAP12]
          Length = 97

 Score = 63.1 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
           E      I FS  + +        +  A+        G T ++ + +  + QA+ +    
Sbjct: 19  ETSKEPEIQFSTWVAEKLGNTNEQLNTADQALNELAGGHTENLHQTMLTLEQAKLSFQYL 78

Query: 90  IALRDKILSAVSEVSKMQI 108
             +R++++SA  ++ + QI
Sbjct: 79  EQIRNRLMSAYQDLLREQI 97


>gi|123442763|ref|YP_001006740.1| flagellar hook-basal body protein FliE [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|166214857|sp|A1JSU2|FLIE_YERE8 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|122089724|emb|CAL12577.1| flagellar hook-basal body complex protein FliE [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|318605264|emb|CBY26762.1| flagellar hook-basal body complex protein FliE [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|330863304|emb|CBX73428.1| flagellar hook-basal body complex protein fliE [Yersinia
           enterocolitica W22703]
          Length = 103

 Score = 62.7 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A  ++ 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFASELKAAIGKISENQQTARTLAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + ++ ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  NFELGVPGVGINDVMVNMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 103


>gi|187925739|ref|YP_001897381.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           phytofirmans PsJN]
 gi|187716933|gb|ACD18157.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           phytofirmans PsJN]
          Length = 111

 Score = 62.7 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQN--SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   +   +S +    ++  +     N  ++  G ++P  F++ L+       GD  KA 
Sbjct: 1   MTFPVNALSSALQQMQSMAAQAAGGSNTVADTSGAATPTGFASALKASLDKISGDQTKAV 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  GESQAFELGSSNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV 111


>gi|242278627|ref|YP_002990756.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           salexigens DSM 2638]
 gi|242121521|gb|ACS79217.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           salexigens DSM 2638]
          Length = 108

 Score = 62.7 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M  +     ++ +              + +   + P SFS  L D  KG      + + +
Sbjct: 1   MSIRNVAMQAYTNAIQNQQKFDKKFDKTMDLNKAEPNSFSETLTDSIKGVNELQGQKKQM 60

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
                 GKT ++ E +  + +A   + ++  +R K+++A  EV KM 
Sbjct: 61  IEEFASGKTQNVHELMISLQKASVAMTMTSTVRTKVMTAYQEVMKMP 107


>gi|304404243|ref|ZP_07385905.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
           curdlanolyticus YK9]
 gi|304347221|gb|EFM13053.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
           curdlanolyticus YK9]
          Length = 102

 Score = 62.7 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+ +            + +  + T            SF   L+          + A+  
Sbjct: 1   MIQAVTAI-----PVQPVQVNNNITAVGQSTPAEVTQSFGNFLEQALNSVSAQEQNAQVQ 55

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   + GK  + + +    QA+ +L L+  +R++++ A  ++ +MQ+
Sbjct: 56  ATQFMAGKVDVSQVMIASEQAQLSLQLTTQIRNRVVEAYQDIMRMQL 102


>gi|299131774|ref|ZP_07024969.1| flagellar hook-basal body complex protein FliE [Afipia sp. 1NLS2]
 gi|298591911|gb|EFI52111.1| flagellar hook-basal body complex protein FliE [Afipia sp. 1NLS2]
          Length = 107

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 50/107 (46%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M       N++ S +  +             G S   SFS+L+++   G +    K++  
Sbjct: 1   MATPSVAANAYASLSRIMDSATSSGGAGKIAGTSGGPSFSSLVKEAMNGVLDAGRKSDAQ 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A   GK ++ + V  + + +  ++  +++RDK++ +  ++ KM I
Sbjct: 61  TVAMASGKANVMDVVTAVAETDVAVSTLVSVRDKVIQSYEDIMKMPI 107


>gi|188576783|ref|YP_001913712.1| flagellar hook-basal body complex protein (FliE) [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188576975|ref|YP_001913904.1| flagellar hook-basal body complex protein (FliE) [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188521235|gb|ACD59180.1| flagellar hook-basal body complex protein (FliE) [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188521427|gb|ACD59372.1| flagellar hook-basal body complex protein (FliE) [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 123

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREA 75
             G +      +     +   SFS  L+    G     ++A  +S A   G     +   
Sbjct: 31  ARGNQIQGLAGAQGTPATQASSFSETLRSAIGGVNEAQQRAGALSKAFEMGDPNADLARV 90

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    Q++     ++ +R++++ A  +V  M +
Sbjct: 91  MVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL 123


>gi|146307848|ref|YP_001188313.1| flagellar hook-basal body protein FliE [Pseudomonas mendocina ymp]
 gi|145576049|gb|ABP85581.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           mendocina ymp]
          Length = 109

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             + +  E      SFS +L           + +  +
Sbjct: 1   MSQGVEFNRLMLEMRAMQAEAMARQKPAASEPVQGMPSFSEMLGQAVNKVNETQQASSKL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ATAFEMGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|325497679|gb|EGC95538.1| flagellar hook-basal body complex protein [Escherichia fergusonii
           ECD227]
          Length = 114

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M     +   +      ISF+  L             A  
Sbjct: 9   MNMSAIQGIQGVISQLQATAMSARAQEPMPQPT----ISFAGQLHAALDRISDTQNTARV 64

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 65  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|253573517|ref|ZP_04850860.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251847045|gb|EES75050.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 102

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%)

Query: 14  SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
                +          N     +   FS+ L D  +G       A+ V+   L GK S  
Sbjct: 8   DSLKPLTGMQTSGNEQNLTPAQAIKQFSSYLNDALEGVAAQEANAQQVNNQFLLGKVSAD 67

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           E +    QA  +L L+  +R+K++ A  E+ + QI
Sbjct: 68  EMMIASEQALLSLQLTTQVRNKVIEAYQEIMRTQI 102


>gi|238755307|ref|ZP_04616650.1| Flagellar hook-basal body complex protein fliE [Yersinia ruckeri
           ATCC 29473]
 gi|238706443|gb|EEP98817.1| Flagellar hook-basal body complex protein fliE [Yersinia ruckeri
           ATCC 29473]
          Length = 104

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   + N           F++ L+            A   + 
Sbjct: 1   MSVQGIEGVLQQMQVSALQAAGSTNKIMPAEPG---FASELKAALGKISEVQTTARTQAQ 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK    + + +  + ++  +L + I +R+K++SA  EV  M +
Sbjct: 58  NFELGKPGVGLNDVMVDMQKSSISLQMGIQVRNKLVSAYQEVMNMGV 104


>gi|270262378|ref|ZP_06190650.1| flagellar hook-basal body complex subunit FliE [Serratia odorifera
           4Rx13]
 gi|270044254|gb|EFA17346.1| flagellar hook-basal body complex subunit FliE [Serratia odorifera
           4Rx13]
          Length = 104

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +       ++       ++      +SF+  L+          + A   + 
Sbjct: 1   MAIQGIEGVLQQLQATAIQAGQI---DQGSAVQGVSFAGELKAAIGKISETQQAARKQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    S+ + +  + ++  +L + + +R+K++SA  EV  M +
Sbjct: 58  DFELGAPGVSLNDVMVDLQKSSISLQMGVQVRNKLVSAYQEVMNMAV 104


>gi|57242335|ref|ZP_00370274.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           upsaliensis RM3195]
 gi|315638446|ref|ZP_07893623.1| flagellar hook-basal body complex protein FliE [Campylobacter
           upsaliensis JV21]
 gi|57017015|gb|EAL53797.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           upsaliensis RM3195]
 gi|315481437|gb|EFU72064.1| flagellar hook-basal body complex protein FliE [Campylobacter
           upsaliensis JV21]
          Length = 98

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
              + +N +       F+ +L++  +      EK E        G+   + +A   I +A
Sbjct: 13  AGNKTNNTQDKGIGDEFAKMLKNEIEDLNTAQEKGEAAMTDIATGQVKDLHQAAIAITKA 72

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E ++   + +R+K +SA  E+++ QI
Sbjct: 73  ESSMKFMLEVRNKAISAYKEITRTQI 98


>gi|188581883|ref|YP_001925328.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           populi BJ001]
 gi|179345381|gb|ACB80793.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           populi BJ001]
          Length = 106

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 44/92 (47%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
            ++            +G ++P  F+  LQ           +A+  +L+A  GK ++ + V
Sbjct: 15  QSLARPGAAKPVQGAQGLTAPGGFTGFLQQSLDSVAQSGAQADRAALSAATGKANVVDVV 74

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + ++E  L   +A+RD+++SA  E+ +M I
Sbjct: 75  TAVAESETALQTLVAVRDRVISAYEEIMRMPI 106


>gi|311068141|ref|YP_003973064.1| flagellar hook-basal body protein FliE [Bacillus atrophaeus 1942]
 gi|310868658|gb|ADP32133.1| flagellar hook-basal body protein FliE [Bacillus atrophaeus 1942]
          Length = 106

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KT 70
            + +T +         NS +   S+  SFS LL++          +++N + A   G   
Sbjct: 9   QVQNTQSTQPVTSQINNSQKTDSSNQTSFSELLKNSISSLNESQVQSDNFTNALAAGKDV 68

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ E +    +A  +L  +   R+K + A  E+ +MQ+
Sbjct: 69  NLDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 106


>gi|290475702|ref|YP_003468591.1| flagellar basal-body protein [Xenorhabdus bovienii SS-2004]
 gi|289175024|emb|CBJ81827.1| flagellar biosynthesis; basal-body component [Xenorhabdus bovienii
           SS-2004]
          Length = 103

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ     +       ++     N     G     F++ L    +        A  +S 
Sbjct: 1   MSIQAIEGVLQQMKAQALQATNIANPMPVQG----GFASHLTAAVEKINQTRLSATKLSQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + ++ ++  +L + I +R+K++SA  E+  MQ+
Sbjct: 57  DFTLGVPGVELNDVMVNMQKSSISLQMGIQVRNKLVSAYHEIMNMQV 103


>gi|77359740|ref|YP_339315.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874651|emb|CAI85872.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 96

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
            G      +   +   +S   F  +L +         +       A   G    S+ EA+
Sbjct: 5   AGRNNQINKLPTQVQSTSSAQFGDMLSNALNTVHELQQDTGQKVKAVEMGDRSVSLAEAM 64

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               ++      ++ +R+K++ A  E+  M +
Sbjct: 65  IASQKSSVAFEATVQVRNKLVEAYKEIMNMPV 96


>gi|99082803|ref|YP_614957.1| flagellar hook-basal body protein FliE [Ruegeria sp. TM1040]
 gi|99039083|gb|ABF65695.1| Flagellar hook-basal body complex protein fliE [Ruegeria sp.
           TM1040]
          Length = 98

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 37/96 (38%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I               +  +   +P S     +   +     +  +E VS+ A+ G    
Sbjct: 3   IRSLTATSGYAAARPATKVDPDYNPTSLQEQAKTSFQDFTNTLAHSEQVSVQAMTGGADP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HQLVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|238794016|ref|ZP_04637634.1| Flagellar hook-basal body complex protein fliE [Yersinia intermedia
           ATCC 29909]
 gi|238726648|gb|EEQ18184.1| Flagellar hook-basal body complex protein fliE [Yersinia intermedia
           ATCC 29909]
          Length = 103

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +             F++ L+        + + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSAKMLPAEA----GFASELKAAIGKISENQQHARTQAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++  +L L I +R+K+++A  +V  M +
Sbjct: 57  NFELGVPGVGLNDVMVDMQKSSVSLQLGIQVRNKLVAAYQDVMNMGV 103


>gi|83309715|ref|YP_419979.1| flagellar hook-basal body protein FliE [Magnetospirillum magneticum
           AMB-1]
 gi|82944556|dbj|BAE49420.1| Flagellar hook-basal body protein [Magnetospirillum magneticum
           AMB-1]
          Length = 103

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 50/94 (53%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
                      +     E   +   F+++L+D AK A+GD + AE  S++A+ GK  +RE
Sbjct: 10  SAYKTAANPFESVGKTSETEGNGTDFASVLKDAAKVAVGDAKTAEKASMSAIAGKADIRE 69

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            V  +  AE TL   + +RDK+++A +E+ +M I
Sbjct: 70  VVAAVANAEMTLETVVNVRDKVINAYNEILRMPI 103


>gi|301029393|ref|ZP_07192487.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           196-1]
 gi|299877697|gb|EFI85908.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           196-1]
          Length = 114

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS   T  M     ++  +      ISF+  L             A  
Sbjct: 9   MKMSAIQGIEGVISQLQTTAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAART 64

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 65  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|170737018|ref|YP_001778278.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia MC0-3]
 gi|169819206|gb|ACA93788.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia MC0-3]
          Length = 106

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           ++ +       +  +    +          F+ LL+   +        A+++  A   G 
Sbjct: 7   SAMLDSIRQSAIPNNDDPITQAPSADIAGGFADLLKQAVRRTDAQQHHADDLVTAVETGA 66

Query: 70  TS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  +  A+    QA  + +  I +R+K++SA  ++ KMQ+
Sbjct: 67  SDDLVGAMLASQQASLSFSTMIQVRNKVMSAFDDIIKMQV 106


>gi|71733829|ref|YP_275542.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|123635743|sp|Q48GE1|FLIE_PSE14 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|71554382|gb|AAZ33593.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320325113|gb|EFW81182.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329372|gb|EFW85365.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330880567|gb|EGH14716.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 109

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSKGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|163856459|ref|YP_001630757.1| flagellar hook-basal body complex protein FliE [Bordetella petrii
           DSM 12804]
 gi|226704221|sp|A9IKU8|FLIE_BORPD RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|163260187|emb|CAP42489.1| flagellar hook-basal body complex protein FliE [Bordetella petrii]
          Length = 110

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  + G  S +     +         S  E    P SF+A LQ   +        A N
Sbjct: 1   MAVSGLSGIESMLQQMRAVVQAAQSNGVSPAELAPQPASFAAELQRSLQRVSAAQIAATN 60

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G    S+ + +  + ++      ++ +R+++++A  E+S M +
Sbjct: 61  QGKAYELGAPGVSLNDVMIDLQKSSIAFQTAVQVRNRLVAAYKEISAMSV 110


>gi|332140581|ref|YP_004426319.1| Flagellar hook-basal body protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550603|gb|AEA97321.1| Flagellar hook-basal body protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 111

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M ++         +      ++ +  Q  +  E  +S   FS +L++   G      +++
Sbjct: 1   MDVKANSLYQEMQNMIGQTRLQVNEPQQQSLNEINTSASDFSTMLKNAVDGVNNMQLESK 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +V      G    S+ + +    ++      ++ +R+K+L A   +  M +
Sbjct: 61  DVQQRFEMGDPSLSLAQVMLTKEKSGIAFEATVQVRNKVLEAYKTIMNMPV 111


>gi|150395484|ref|YP_001325951.1| flagellar hook-basal body protein FliE [Sinorhizobium medicae
           WSM419]
 gi|166214856|sp|A6U636|FLIE_SINMW RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|150026999|gb|ABR59116.1| flagellar hook-basal body complex protein FliE [Sinorhizobium
           medicae WSM419]
          Length = 111

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFIS----HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           MI+ IQ   +F +                            SF+ +L +M   AI  ++ 
Sbjct: 1   MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKS 60

Query: 58  AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE VSL A++G+ + RE VD +M AE++L  +IA+RDK+++A  E+++MQI
Sbjct: 61  AEGVSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111


>gi|326386945|ref|ZP_08208559.1| flagellar hook-basal body complex protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208625|gb|EGD59428.1| flagellar hook-basal body complex protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 121

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
            +R      +     +   SF+  L+           KA+ V+ A  +G+   + + +  
Sbjct: 32  QVRSSDATTTASTSDAPAGSFTDALKTALDTVNRTDAKADAVTEAYEKGEVTDVAQVMLA 91

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++      ++ +R+K+LSA  ++ K+ +
Sbjct: 92  RQESGVAFEATLQVRNKLLSAYQDIMKLGV 121


>gi|167588729|ref|ZP_02381117.1| flagellar hook-basal body complex protein [Burkholderia ubonensis
           Bu]
          Length = 114

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS-----FSALLQDMAKGAIGDME 56
           M   + G  S +     +  +      S     +   +     F++ ++       GD +
Sbjct: 1   MTANVGGIGSVLQQMQAMAAQAASGAASPSAAVAGSGAATAGTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A   + A   G    S+ + +  + +A       + +R+K+++A +EV +M +
Sbjct: 61  RALGEAHAFEVGAPNISLNDVMVDMQKANIGFQFGLQVRNKLVTAYNEVMQMPV 114


>gi|189910282|ref|YP_001961837.1| flagellar hook-basal body protein FliE [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774958|gb|ABZ93259.1| Endoflagellar hook-basal body protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
          Length = 127

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAER 84
            N  +       +F+  L+   +       +A+ ++   +       + + +    +A  
Sbjct: 45  TNEAKSPDEVAGTFADALKKAFEQVNDQQVEADELTQKIVFDPNSVELHDVMIAAEKARI 104

Query: 85  TLNLSIALRDKILSAVSEV 103
           +L  +  + D  + A  E+
Sbjct: 105 SLTFAKTMSDGFVRAYREL 123


>gi|237751240|ref|ZP_04581720.1| flagellar hook-basal body protein FliE [Helicobacter bilis ATCC
           43879]
 gi|229372606|gb|EEO22997.1| flagellar hook-basal body protein FliE [Helicobacter bilis ATCC
           43879]
          Length = 100

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           + ++H    G+      + + E       FS+LL+          E ++        G+ 
Sbjct: 2   AQVTHIAAPGLADISLTDVSNEVRGRQGDFSSLLKQSLDELNASQEVSDRALADMASGQV 61

Query: 71  -SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +A   I +AE ++ L + +R+K +SA  E+ + QI
Sbjct: 62  KDLHQAAITIGKAETSMKLMLEVRNKAISAYKEILRTQI 100


>gi|258404783|ref|YP_003197525.1| flagellar hook-basal body complex subunit FliE [Desulfohalobium
           retbaense DSM 5692]
 gi|257797010|gb|ACV67947.1| flagellar hook-basal body complex subunit FliE [Desulfohalobium
           retbaense DSM 5692]
          Length = 103

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMR 73
                         +     +   SF   L +  +      + A    L +  G  TS+ 
Sbjct: 9   AAGAANFLEQSGAANAGGQQTPVESFRDTLLEAVQEVDSQKKTANTAILDSTTGGGTSIH 68

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           E +  + +A  ++ L + +R+K + A  E+ +MQ+
Sbjct: 69  ETMVAMEKAGTSMKLMVQVRNKAMDAYKEIMRMQV 103


>gi|162533075|ref|NP_791780.3| flagellar hook-basal body complex protein FliE [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28852401|gb|AAO55475.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 118

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 10  MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 69

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 70  ANAFEVGKSGIDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 118


>gi|330961219|gb|EGH61479.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 109

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGPQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ASAFEVGKSGIDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|2275160|gb|AAB81412.1| FliE [Sinorhizobium meliloti]
          Length = 111

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIG----MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           MI+ IQ   +F +  +T G                      SF+ +L +M   AI  M+ 
Sbjct: 1   MIDAIQSVGAFSTIRETEGAGPASSASLVMPGAGTAAPQAGSFAEVLGNMTTDAIRSMKS 60

Query: 58  AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE  SL A++G+ + RE VD +M AE++L  +IA+RDK+++A  E+++MQI
Sbjct: 61  AEGTSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI 111


>gi|86157821|ref|YP_464606.1| flagellar hook-basal body complex protein (FliE) [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|197122866|ref|YP_002134817.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
           sp. K]
 gi|220917657|ref|YP_002492961.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|85774332|gb|ABC81169.1| flagellar hook-basal body complex protein (FliE) [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|196172715|gb|ACG73688.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
           sp. K]
 gi|219955511|gb|ACL65895.1| flagellar hook-basal body complex subunit FliE [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 95

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 33/73 (45%)

Query: 36  SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
              +F   L +    A      A+  +  +  G+ ++ E    + +A+  + ++  +R+K
Sbjct: 23  EGGTFGRALGEALAQAEALQGAADAQAARSALGEGNLHETALALEKADVAMRVATRVRNK 82

Query: 96  ILSAVSEVSKMQI 108
           ++ A  EV +M +
Sbjct: 83  LVEAYQEVMRMSV 95


>gi|86151745|ref|ZP_01069959.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85841374|gb|EAQ58622.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 260.94]
          Length = 98

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            N ++        F+ +L++         E  E        G+   + +A   I +AE +
Sbjct: 16  TNKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEATMTDIATGQVKDLHQAAIAITKAESS 75

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +   + +R+K +SA  E+++ QI
Sbjct: 76  MKFMLEVRNKAISAYKEITRTQI 98


>gi|32490810|ref|NP_871064.1| hypothetical protein WGLp061 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166016|dbj|BAC24207.1| fliE [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 109

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKIL 97
           FS + +   K    ++  +EN+S   L GK++  + E +  + ++  +LN  I + +KI+
Sbjct: 39  FSDIFEKNIKKINSNIINSENLSKEFLLGKSNVGINEVMIEMQKSAISLNFGIQVNNKIV 98

Query: 98  SAVSEVSKMQI 108
            A  E+  M I
Sbjct: 99  GAYQEIMNMSI 109


>gi|57167571|ref|ZP_00366711.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           coli RM2228]
 gi|305433077|ref|ZP_07402233.1| flagellar hook-basal body complex protein FliE [Campylobacter coli
           JV20]
 gi|57020693|gb|EAL57357.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           coli RM2228]
 gi|304443778|gb|EFM36435.1| flagellar hook-basal body complex protein FliE [Campylobacter coli
           JV20]
          Length = 99

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
                S          F+ +L++  +      + AE        G+   + +A   I +A
Sbjct: 14  SNANKSQNSNDKIGDEFAKMLKNEIEDLDKTQKTAEAAMTDIATGQVKDLHQAAIAITKA 73

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E ++   + +R+K +SA  E+++ QI
Sbjct: 74  ESSMKFMLEVRNKAISAYKEITRTQI 99


>gi|92114077|ref|YP_574005.1| flagellar hook-basal body complex protein (FliE) [Chromohalobacter
           salexigens DSM 3043]
 gi|91797167|gb|ABE59306.1| flagellar hook-basal body complex protein (FliE) [Chromohalobacter
           salexigens DSM 3043]
          Length = 107

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
                 +  +    ++  +   T  S          F+  L           + A   + 
Sbjct: 1   MSAPALSQALQQMQSLASQAGQTSGSQVNTAVGSGGFTGELHSAISRINRLQQSANAQAE 60

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   G     + + +  + +A     +   +R+++++A  +V  MQ+
Sbjct: 61  AFEAGAPGVELNDVMVDMQKASVAFEMGKQVRNRLVTAYKDVMNMQV 107


>gi|229918626|ref|YP_002887272.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium sp.
           AT1b]
 gi|229470055|gb|ACQ71827.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium sp.
           AT1b]
          Length = 93

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 35/93 (37%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
                ++    + +     ++P  F + L +         +           GK  + + 
Sbjct: 1   MQINPIQLMSPEVTPSMSKTNPSQFGSYLNEAMNALNETQQATSQARKDLAVGKADLHQV 60

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    ++   + L+I +R+K + A  E+ +MQ+
Sbjct: 61  MIQSEESSIAMQLAIEVRNKAVEAYQEMMRMQV 93


>gi|75675327|ref|YP_317748.1| flagellar hook-basal body protein FliE [Nitrobacter winogradskyi
           Nb-255]
 gi|74420197|gb|ABA04396.1| Flagellar hook-basal body complex protein FliE [Nitrobacter
           winogradskyi Nb-255]
          Length = 103

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 46/96 (47%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
            +   ++    D    + +  G    SF A+L+D+  G +     ++  ++A   GK ++
Sbjct: 8   ANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAMASGKANL 67

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + V  +   +  ++  +++RD+++ +  ++ +M I
Sbjct: 68  MDVVTAVADTDVAVSTLVSVRDRVIQSYEDIMRMPI 103


>gi|84514817|ref|ZP_01002180.1| flagellar protein FliE [Loktanella vestfoldensis SKA53]
 gi|84510976|gb|EAQ07430.1| flagellar  protein FliE [Loktanella vestfoldensis SKA53]
          Length = 113

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 37/107 (34%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I  +  T    + +    M             +   SF+ L+ D           A  + 
Sbjct: 7   ISNVSSTTVNAALSRAADMAERAAGGGMVGRSNDGSSFADLMSDSLDNVARSQNDAAQLV 66

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G +T + + +     +  +  +++ +R+K LSA  ++  M +
Sbjct: 67  KDYETGKETDLTKVMVAQQVSSLSFQMALNVRNKALSAYKDIMNMPV 113


>gi|257871288|ref|ZP_05650941.1| predicted protein [Enterococcus gallinarum EG2]
 gi|257805452|gb|EEV34274.1| predicted protein [Enterococcus gallinarum EG2]
          Length = 107

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQ 81
                N     G+    FS+ L              +  ++  + G  + +   +  + +
Sbjct: 21  TGAASNETSVAGAKENQFSSYLTHAVDQLNQKTTVMDQDTVNLITGDESDLGNVMIRMTE 80

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A+  L  ++ +R+K L A ++V  MQ
Sbjct: 81  AQLALQTAVQVRNKCLEAYNDVKNMQ 106


>gi|300717229|ref|YP_003742032.1| flagellar hook-basal body complex protein [Erwinia billingiae
           Eb661]
 gi|299063065|emb|CAX60185.1| Flagellar hook-basal body complex protein [Erwinia billingiae
           Eb661]
          Length = 103

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG  S +    T  ++            SS   F+  L+           +A   + 
Sbjct: 1   MSIQGIESVMQQLQTAAIQASGKS----TDASSHADFAGELKAALNKISDTQNEARTQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   ++ + +  + ++  ++ + I +R+K++SA +++  MQ+
Sbjct: 57  DFELGKPGINLNDVMVDMQKSSVSMQMGIQVRNKLVSAYTDIMNMQV 103


>gi|187478211|ref|YP_786235.1| flagellar hook-basal body complex protein [Bordetella avium 197N]
 gi|123515035|sp|Q2L182|FLIE_BORA1 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|115422797|emb|CAJ49325.1| flagellar hook-basal body complex protein [Bordetella avium 197N]
          Length = 112

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTI--GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M +  I G  S +     +    +      ++    ++  SF+A LQ+  +        A
Sbjct: 1   MAVSGISGVESMLQQMRAVVRAAQNQAATPTDLSPSAASGSFAAELQNSIRKISNAQNAA 60

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            N + A   G  + S+ + +  + +A      ++ +R+++++A  E+S M I
Sbjct: 61  GNQAKAFEMGVPEVSLNDVMIDLQKASLGFQSAVQVRNRLVAAYKEISSMSI 112


>gi|193071139|ref|ZP_03052063.1| flagellar hook-basal body complex protein [Escherichia coli
           E110019]
 gi|192955534|gb|EDV86013.1| flagellar hook-basal body complex protein [Escherichia coli
           E110019]
          Length = 114

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M     ++  +      ISF+  L             A  
Sbjct: 9   MKMSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAART 64

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 65  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|167835059|ref|ZP_02461942.1| flagellar hook-basal body complex protein [Burkholderia
           thailandensis MSMB43]
          Length = 114

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYD-----FTQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           M+  + G  S +     +  +               G ++  SF++ ++       GD +
Sbjct: 1   MVAPVNGIASALQQMQAMAAQAAGGAAGPATTLAGSGAATAGSFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           KA   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 61  KALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 114


>gi|23016626|ref|ZP_00056380.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 103

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
            + I    S  +  +++G           E   +   F+++L+D AK A+GD + AE  S
Sbjct: 6   TDAISAYKSAANPFESVGKTS--------ETEGNGTDFASVLKDAAKVAVGDAKSAEKAS 57

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A+ GK  +RE V  +  AE TL   + +RDK+++A +E+ +M I
Sbjct: 58  MSAIAGKADIREVVAAVANAEMTLETVVNVRDKVINAYNEILRMPI 103


>gi|255021372|ref|ZP_05293420.1| Flagellar hook-basal body complex protein fliE [Acidithiobacillus
           caldus ATCC 51756]
 gi|254969235|gb|EET26749.1| Flagellar hook-basal body complex protein fliE [Acidithiobacillus
           caldus ATCC 51756]
          Length = 107

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 45/107 (42%), Gaps = 3/107 (2%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  ++  ++ +S    +  +    +       +    F+  L+ M +G   +  +A  + 
Sbjct: 1   MSSVESLDALLSQLRNLAGQAQGLK-VPAASSAGATGFAETLKGMVEGVNQEQAQANQLQ 59

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            +   G    S+ + +    +A+ +    + +R+K++SA  ++  +Q
Sbjct: 60  NSFASGDPAVSLSQVMVASQKADLSFQTMLQVRNKLVSAYQDIMNIQ 106


>gi|237705896|ref|ZP_04536377.1| flagellar hook-basal body complex protein fliE [Escherichia sp.
           3_2_53FAA]
 gi|26108609|gb|AAN80812.1|AE016762_65 Flagellar hook-basal body complex protein fliE [Escherichia coli
           CFT073]
 gi|91072729|gb|ABE07610.1| flagellar biosynthesis; basal-body component, possibly at
           (MS-ring)-rod junction [Escherichia coli UTI89]
 gi|226900653|gb|EEH86912.1| flagellar hook-basal body complex protein fliE [Escherichia sp.
           3_2_53FAA]
          Length = 114

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 11  MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTVARTQA 66

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 67  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|15887899|ref|NP_353580.1| flagellar hook-basal body protein FliE [Agrobacterium tumefaciens
           str. C58]
 gi|3913678|sp|Q44337|FLIE_AGRT5 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|1086560|gb|AAB68967.1| FliE [Agrobacterium tumefaciens]
 gi|2459713|gb|AAB71789.1| FliE [Agrobacterium tumefaciens]
 gi|15155491|gb|AAK86365.1| flagellar hook-basal body complex protein [Agrobacterium
           tumefaciens str. C58]
          Length = 112

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYD-----FTQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           MI+ I+   S        G+          +  +     +  SF+++L +++  A+ +++
Sbjct: 1   MIDGIKQLGSLSLTRGASGVSSLTESLFGGEQQSTPAQQTGASFASVLGNVSMDAMNNLK 60

Query: 57  KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           KAE  S   +QGK + RE VD ++ AE++L  +IALRDKI+SA  +++KMQI
Sbjct: 61  KAEVASFEGIQGKANTREVVDAVLSAEQSLQTAIALRDKIVSAYLDITKMQI 112


>gi|15616694|ref|NP_239906.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
 gi|219681451|ref|YP_002467836.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. 5A (Acyrthosiphon pisum)]
 gi|257471126|ref|ZP_05635125.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. LSR1 (Acyrthosiphon pisum)]
 gi|11386781|sp|P57174|FLIE_BUCAI RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|25403535|pir||H84937 flagellar hook-basal body complex protein fliE [imported] -
           Buchnera sp. (strain APS)
 gi|10038757|dbj|BAB12792.1| flagellar hook-basal body complex protein fliE [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
 gi|219624294|gb|ACL30449.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. 5A (Acyrthosiphon pisum)]
          Length = 98

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL--QGKTSMREAVDHIMQAERTLNLS 89
                  +F   ++        +   A+  S   +  Q   S+ + + ++ ++  ++ L+
Sbjct: 20  AQKKDSENFIDYIKIALGEISKNQNHAKIDSEKFILNQSGISLNDVMINLEKSSISMQLA 79

Query: 90  IALRDKILSAVSEVSKMQI 108
           + +R+KI+SA  E+   QI
Sbjct: 80  VQIRNKIVSAYQEIMSQQI 98


>gi|78355401|ref|YP_386850.1| flagellar hook-basal body complex protein (FliE) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217806|gb|ABB37155.1| flagellar hook-basal body complex protein (FliE) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 109

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 2/108 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M  Q  G  ++ +            Q+           SFS  +    K       +   
Sbjct: 1   MTIQSVGLKAYSNALSNFTKAERSIQSGKLTPEPRVERSFSDTINSSVKKVNDMQSEKST 60

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           +  +   G+T ++ E +  + +A   + ++ A+R+K++ A  E+SKMQ
Sbjct: 61  MIQSFASGETQNVHELMITLQKASVAVKMTSAVRNKVMEAYRELSKMQ 108


>gi|21672358|ref|NP_660425.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Sg (Schizaphis graminum)]
 gi|25008479|sp|Q8KA46|FLIE_BUCAP RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|21622962|gb|AAM67636.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Sg (Schizaphis graminum)]
          Length = 101

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDKIL 97
           F    Q            ++             S+ + + ++ ++  ++ L+I +R++I+
Sbjct: 31  FINHFQKALGEISNIQNNSKKNIEKFQSNHSDISLNDIMINLQKSSISIELAIQVRNRII 90

Query: 98  SAVSEVSKMQI 108
           SA  E+   QI
Sbjct: 91  SAYKEIMNQQI 101


>gi|259417298|ref|ZP_05741217.1| flagellar hook-basal body protein FliE [Silicibacter sp. TrichCH4B]
 gi|259346204|gb|EEW58018.1| flagellar hook-basal body protein FliE [Silicibacter sp. TrichCH4B]
          Length = 98

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 37/96 (38%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I               +  +   +P S     +   +     +  +E VS+ ++ G    
Sbjct: 3   IRSLTATSGYAAARPATKVDPDYNPASLQEQAKTSFQDFTNTLAHSEQVSVQSMTGGADP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HQLVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|163852026|ref|YP_001640069.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           extorquens PA1]
 gi|218530780|ref|YP_002421596.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           chloromethanicum CM4]
 gi|240139293|ref|YP_002963768.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens AM1]
 gi|254561749|ref|YP_003068844.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens DM4]
 gi|163663631|gb|ABY30998.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           extorquens PA1]
 gi|218523083|gb|ACK83668.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           chloromethanicum CM4]
 gi|240009265|gb|ACS40491.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens AM1]
 gi|254269027|emb|CAX24988.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens DM4]
          Length = 107

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 46/107 (42%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M        ++ +                 +G ++P  F+  LQ           +A+  
Sbjct: 1   MTTSAFAAGAYGAAQSLARPGAVKPVQGMAQGLTAPGGFTGFLQQSLDNVAQSGAQADRA 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +L+A  GK ++ + V  + ++E  L   +A+RD+++SA  E+ +M I
Sbjct: 61  ALSAATGKANVVDVVTAVAESETALQTLVAVRDRVISAYEEIMRMPI 107


>gi|291277451|ref|YP_003517223.1| putative flagellar hook-basal body complex protein [Helicobacter
           mustelae 12198]
 gi|290964645|emb|CBG40499.1| putative flagellar hook-basal body complex protein [Helicobacter
           mustelae 12198]
          Length = 101

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
           + D   +++ +  S    FS LL+          E ++   +    G+   + +A   I 
Sbjct: 14  QVDQKASASVKKTSDSNDFSKLLKKSIDELNQAQESSDKALVDMATGQIKDLHQAAIAIG 73

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +AE ++ L + +R+K +SA  E+ + Q+
Sbjct: 74  RAETSMKLMLEVRNKAISAYKEILRTQV 101


>gi|22126358|ref|NP_669781.1| flagellar hook-basal body protein FliE [Yersinia pestis KIM 10]
 gi|153947410|ref|YP_001401258.1| flagellar hook-basal body protein FliE [Yersinia pseudotuberculosis
           IP 31758]
 gi|21959342|gb|AAM86032.1|AE013851_4 basal-body component [Yersinia pestis KIM 10]
 gi|152958905|gb|ABS46366.1| flagellar hook-basal body complex protein (FliE) [Yersinia
           pseudotuberculosis IP 31758]
          Length = 105

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 6/109 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +QG    +       ++   +  +          F++ L+        + + A   
Sbjct: 1   MNMSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFASELKAAIGKISENQQVARTS 56

Query: 62  SLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +     G     + + + +  ++  +L L I +R+K+++A  EV  M +
Sbjct: 57  AQNFELGVPGVGLNDVMVNAQKSSVSLQLGIQVRNKLVAAYQEVMNMGV 105


>gi|219682007|ref|YP_002468391.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Tuc7 (Acyrthosiphon pisum)]
 gi|219621740|gb|ACL29896.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Tuc7 (Acyrthosiphon pisum)]
 gi|311085814|gb|ADP65896.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. LL01 (Acyrthosiphon pisum)]
 gi|311086387|gb|ADP66468.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. TLW03 (Acyrthosiphon pisum)]
 gi|311086967|gb|ADP67047.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. JF99 (Acyrthosiphon pisum)]
 gi|311087543|gb|ADP67622.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. JF98 (Acyrthosiphon pisum)]
          Length = 98

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL--QGKTSMREAVDHIMQAERTLNLS 89
                  +F   ++        +   A+  S   +  Q  TS+ + + ++ ++  ++ L+
Sbjct: 20  AQKKDSENFIDYIKIALGEISKNQNHAKIDSEKFILNQSGTSLNDVMINLEKSSISMQLA 79

Query: 90  IALRDKILSAVSEVSKMQI 108
           + +R+KI+SA  E+   QI
Sbjct: 80  VQIRNKIVSAYQEIMSQQI 98


>gi|117923584|ref|YP_864201.1| flagellar hook-basal body complex subunit FliE [Magnetococcus sp.
           MC-1]
 gi|117607340|gb|ABK42795.1| flagellar hook-basal body complex subunit FliE [Magnetococcus sp.
           MC-1]
          Length = 103

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           + +     I         S+ + G    SFS LL    K      +KA  +   A+ G  
Sbjct: 4   AALPQLPNIAQLSKGMSLSSTKAGGPWESFSTLLSQQIKETQQLEKKARVLGEKAMLGNA 63

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ EA      AE  + L +  R+K +    EV  M +
Sbjct: 64  GVSLHEAQIAGATAELHMQLLVQTRNKAVEVYKEVMNMPV 103


>gi|260429314|ref|ZP_05783291.1| flagellar hook-basal body protein FliE [Citreicella sp. SE45]
 gi|260419937|gb|EEX13190.1| flagellar hook-basal body protein FliE [Citreicella sp. SE45]
          Length = 96

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 34/89 (38%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
             +    Q    E             + A+     + +AE  +  ++ G       V  +
Sbjct: 8   AAQKYAAQRPATEPQPGTGGIQEKFVEAAQDFAATLAEAETTAQQSMTGDADPHALVQAL 67

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            Q+E  +   +A+R+K++ A  E+ +M +
Sbjct: 68  AQSELAVETVVAVRNKVVEAYQEILRMPV 96


>gi|325291940|ref|YP_004277804.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
 gi|325059793|gb|ADY63484.1| flagellar hook-basal body protein FliE [Agrobacterium sp. H13-3]
          Length = 111

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDF----TQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           MI+ I+   S      T  +                  +  SF+++L +M+  A+ +++K
Sbjct: 1   MIDGIKQLGSLSLTRGTSNVSSLTDSIFGSQQTTPAQQTGASFASVLGNMSTDAMNNLKK 60

Query: 58  AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE  S   +QGK + RE VD ++ AE++L  +IA RDKI+SA  +++KMQI
Sbjct: 61  AEVASFEGIQGKANTREVVDAVLSAEQSLQTAIAFRDKIVSAYLDITKMQI 111


>gi|238927419|ref|ZP_04659179.1| flagellar hook-basal body complex subunit FliE [Selenomonas
           flueggei ATCC 43531]
 gi|238884701|gb|EEQ48339.1| flagellar hook-basal body complex subunit FliE [Selenomonas
           flueggei ATCC 43531]
          Length = 102

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
                +        +   SF   L+D           +E  +     G+   + + +   
Sbjct: 14  AMRATSHLGETIDKAEKKSFGMYLKDALSEVNHLQLASEEQTKLLAAGEVQDVSQVIVAG 73

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A+  L L++ +R++ LSA  E+ +MQ+
Sbjct: 74  QKADIALQLTLQMRNRALSAYQEIMRMQV 102


>gi|89075512|ref|ZP_01161923.1| flagellar hook-basal body protein [Photobacterium sp. SKA34]
 gi|89048784|gb|EAR54355.1| flagellar hook-basal body protein [Photobacterium sp. SKA34]
          Length = 103

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +               S          F  LL D  +       ++  ++ 
Sbjct: 1   MKVNGLQAEMQAMR----LDAQNTTSPATAQQVSSDFGNLLNDALQSVNQLQGQSSELAT 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              QG    S+ + +    ++      ++ +R+K++ A  E+  M +
Sbjct: 57  RFDQGDRSVSLADVMIARNKSSVAFEATVQVRNKMVQAYKELMNMPV 103


>gi|49080000|gb|AAT49958.1| PA1100 [synthetic construct]
          Length = 110

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +           SFS +L           + +  +
Sbjct: 1   MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAM 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|332284043|ref|YP_004415954.1| flagellar hook-basal body complex protein FliE [Pusillimonas sp.
           T7-7]
 gi|330427996|gb|AEC19330.1| flagellar hook-basal body complex protein FliE [Pusillimonas sp.
           T7-7]
          Length = 110

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 43/110 (39%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+ +    + ++    +      +  +      S   F+A L    +       ++  
Sbjct: 1   MAIQNLSAIENMLAQMRAVAQAASSSPGAGSSVEPSTGGFAAELARSLERVSTLQNESAA 60

Query: 61  VSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A   G+    + + +  + +A      ++ +R+++++A  E++ M +
Sbjct: 61  QARAFQIGEADVSLNDVMIDMQKASIAFQATVQVRNRLVAAYQEIASMPV 110


>gi|157376199|ref|YP_001474799.1| flagellar hook-basal body complex subunit FliE [Shewanella
           sediminis HAW-EB3]
 gi|157318573|gb|ABV37671.1| flagellar hook-basal body complex subunit FliE [Shewanella
           sediminis HAW-EB3]
          Length = 110

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I          S +  I      TQ + +   +S  +F  LL             + +
Sbjct: 1   MQIGANSLLQEMQSLSGEIPAGGINTQITRQVNNTSGSNFGELLSQAVGSVGELQANSAS 60

Query: 61  VSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     G TS  + + V    +A      ++ +R+K + A  ++  M +
Sbjct: 61  MASRLDMGDTSVTLSDTVIAREKASVAFEATVQVRNKFVEAYKQIMSMPV 110


>gi|325567532|ref|ZP_08144199.1| flagellar hook-basal body complex protein FliE [Enterococcus
           casseliflavus ATCC 12755]
 gi|325158965|gb|EGC71111.1| flagellar hook-basal body complex protein FliE [Enterococcus
           casseliflavus ATCC 12755]
          Length = 107

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQ 81
                N     G+    FS+ L +            +  ++  + G  + +   +  + +
Sbjct: 21  TGAASNETSVVGTKENQFSSYLTNAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRMTE 80

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A+  L  ++ +R+K L A ++V  MQ
Sbjct: 81  AQLALQTAVQVRNKCLEAYNDVKNMQ 106


>gi|307822871|ref|ZP_07653102.1| flagellar hook-basal body complex subunit FliE [Methylobacter
           tundripaludum SV96]
 gi|307736475|gb|EFO07321.1| flagellar hook-basal body complex subunit FliE [Methylobacter
           tundripaludum SV96]
          Length = 104

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 5/103 (4%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N  ++    + +     +     GG+    F+A+L+          + A  ++ A   
Sbjct: 5   NVNQVLAQMRAMSLEAGGGKVQETGGGA---DFAAMLKQTIGTVNDTQQTAGKMTEAFES 61

Query: 68  GKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G T+  + E +    +A  +    + +R+K++ A  +V  M +
Sbjct: 62  GDTNVSLAEVMVASQKASVSFQAMLQVRNKLVEAYQDVMNMPM 104


>gi|57238274|ref|YP_178645.1| flagellar hook-basal body protein FliE [Campylobacter jejuni
           RM1221]
 gi|86153325|ref|ZP_01071529.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|121613420|ref|YP_001000226.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148925897|ref|ZP_01809584.1| putative flagellar hook-basal body complex protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|157414807|ref|YP_001482063.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005181|ref|ZP_02270939.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|205355382|ref|ZP_03222153.1| putative flagellar hooK basal body complex protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|283955948|ref|ZP_06373438.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|57167078|gb|AAW35857.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni RM1221]
 gi|85843051|gb|EAQ60262.1| flagellar hook-basal body complex protein (FliE) [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250167|gb|EAQ73125.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|145844883|gb|EDK21987.1| putative flagellar hook-basal body complex protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|157385771|gb|ABV52086.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|205346616|gb|EDZ33248.1| putative flagellar hooK basal body complex protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|283792608|gb|EFC31387.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925789|gb|ADC28141.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747445|gb|ADN90715.1| Flagellar hook-basal body complex protein fliE [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315057944|gb|ADT72273.1| Flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni S3]
 gi|315931720|gb|EFV10675.1| flagellar hook-basal body complex protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 98

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            N ++        F+ +L++         E  E        G+   + +A   I +AE +
Sbjct: 16  TNKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESS 75

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +   + +R+K +SA  E+++ QI
Sbjct: 76  MKFMLEVRNKAISAYKEITRTQI 98


>gi|68164521|gb|AAY87250.1| predicted flagellar hook-basal body protein [uncultured bacterium
           BAC17H8]
          Length = 105

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 6   IQGTNSFISHTDTI-GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
           +       S   +         Q + E        F   + +          K  ++  A
Sbjct: 1   MSTIGPIGSSLGSSHAQVLKRAQEALETQKQPSEGFGNRITNAIDQVAAAQNKTADLVKA 60

Query: 65  ALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G +  + + + +   +     L++ +R+K+LSA  ++  M +
Sbjct: 61  YEMGMENDISKVMVNQQVSSLGFQLTLNVRNKVLSAYKDIMNMPV 105


>gi|134297239|ref|YP_001120974.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           vietnamiensis G4]
 gi|166214848|sp|A4JIN6|FLIE_BURVG RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|134140396|gb|ABO56139.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           vietnamiensis G4]
          Length = 114

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTI-----GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           M+  + G  S +     +     G            G ++  +F++ ++       GD +
Sbjct: 1   MVANVSGIGSVLQQMQAMAAQANGGVASPAAALAGSGAATAGTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G  +  + + +  + +A       + +R+K++SA +EV +M +
Sbjct: 61  HALGEARAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEVMQMSV 114


>gi|26991059|ref|NP_746484.1| flagellar hook-basal body protein FliE [Pseudomonas putida KT2440]
 gi|148546736|ref|YP_001266838.1| flagellar hook-basal body protein FliE [Pseudomonas putida F1]
 gi|167034926|ref|YP_001670157.1| flagellar hook-basal body protein FliE [Pseudomonas putida GB-1]
 gi|325273532|ref|ZP_08139765.1| flagellar hook-basal body protein FliE [Pseudomonas sp. TJI-51]
 gi|38502976|sp|Q88ET3|FLIE_PSEPK RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214854|sp|A5W0J4|FLIE_PSEP1 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|189044493|sp|B0KQZ5|FLIE_PSEPG RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|24986092|gb|AAN69948.1|AE016633_6 flagellar hook-basal body complex protein FliE [Pseudomonas putida
           KT2440]
 gi|148510794|gb|ABQ77654.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
           F1]
 gi|166861414|gb|ABY99821.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
           GB-1]
 gi|313497795|gb|ADR59161.1| FliE [Pseudomonas putida BIRD-1]
 gi|324101333|gb|EGB98946.1| flagellar hook-basal body protein FliE [Pseudomonas sp. TJI-51]
          Length = 110

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 28  NSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERT 85
            +  E      +F+ +L           + +  ++ A   GK    + + +    +A  +
Sbjct: 28  TAAPELAPGQSTFADMLGQAIGKVHETQQASTQLANAFEIGKSGVDLTDVMIASQKASVS 87

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +     +R+K++ A  ++ +M +
Sbjct: 88  MQAMTQVRNKLVQAYQDIMQMPV 110


>gi|313683372|ref|YP_004061110.1| flagellar hook-basal body complex subunit flie [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156232|gb|ADR34910.1| flagellar hook-basal body complex subunit FliE [Sulfuricurvum
           kujiense DSM 16994]
          Length = 100

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
           I    ++         S      S   F+  L++            E        G    
Sbjct: 4   IHSLKSLSTADLLANKSGNAVEGSSTDFAQELKNALGNVNQMQVDGEKAMSDIATGSVKD 63

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +A   I +AE ++ L + +R+K L+A  E+++ Q+
Sbjct: 64  LHQAAIAIDKAEISMKLMLEVRNKALNAYKEITRTQM 100


>gi|257484921|ref|ZP_05638962.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627783|ref|ZP_06460737.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651626|ref|ZP_06482969.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487836|ref|ZP_07005876.1| Flagellar hook-basal body complex protein fliE [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157561|gb|EFH98641.1| Flagellar hook-basal body complex protein fliE [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330866443|gb|EGH01152.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330889062|gb|EGH21723.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330953747|gb|EGH54007.1| flagellar hook-basal body protein FliE [Pseudomonas syringae Cit 7]
 gi|331011062|gb|EGH91118.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 109

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|300722639|ref|YP_003711929.1| flagellar basal-body protein [Xenorhabdus nematophila ATCC 19061]
 gi|297629146|emb|CBJ89742.1| flagellar biosynthesis; basal-body component [Xenorhabdus
           nematophila ATCC 19061]
          Length = 103

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ     +       ++         +       F++ L    +        ++  + 
Sbjct: 1   MSIQAIEGVLQQMQVQALQAANI----AKPVPVQSGFASQLTAAVEKINQTRLNSDKQAK 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + ++ ++  +L + I +R+K++SA  E+  MQ+
Sbjct: 57  NFTLGVPGVELNDVMVNMQKSSISLQMGIQVRNKLVSAYHEIMNMQV 103


>gi|220904840|ref|YP_002480152.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869139|gb|ACL49474.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 148

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSI 90
              +S  SF+  L+D            +        G+T +++E +  + ++   + L+ 
Sbjct: 71  TPVTSESSFTGTLRDSLNKVNQLQGVKDEAISEFASGRTQNVQELMITMQKSSLAMKLTT 130

Query: 91  ALRDKILSAVSEVSKMQ 107
           A+R K+L A  E+SKMQ
Sbjct: 131 AVRGKVLEAYKEISKMQ 147


>gi|119899003|ref|YP_934216.1| flagellar hook-basal body complex protein FliE [Azoarcus sp. BH72]
 gi|119671416|emb|CAL95329.1| flagellar hook-basal body complex protein FliE [Azoarcus sp. BH72]
          Length = 98

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDH 78
            +    + +    G+  + F+ +LQ          ++A +++     G    ++++ + +
Sbjct: 9   TQAAQNKPAQNTQGAEGVDFAQVLQTAMADVSAAQKEARSMAQDFSAGDPNVNLQDVMVN 68

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +A  +    + +R+++++A  ++  M +
Sbjct: 69  LQKANLSFQQMVQVRNRLVTAYQDIMNMPV 98


>gi|303248347|ref|ZP_07334608.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           fructosovorans JJ]
 gi|302490255|gb|EFL50169.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           fructosovorans JJ]
          Length = 107

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI  +   +++ +     G        S  + G+    F  +L D          +  ++
Sbjct: 1   MISPL-ALSAYKTAMAQTGAIDAQVSKSLTKPGAPAEGFGQMLTDSLTTVNNMQNEKNDM 59

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
             A   GK+ ++ E + ++ +A   + ++ A+R K+L A  E+ KMQ
Sbjct: 60  VEAFAAGKSQNVHELMINLQKAGMAMQMTTAVRGKVLEAYKELVKMQ 106


>gi|257866377|ref|ZP_05646030.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257873107|ref|ZP_05652760.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257800335|gb|EEV29363.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257807271|gb|EEV36093.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 107

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQ 81
                N     G+    FS+ L +            +  ++  + G  + +   +  + +
Sbjct: 21  TGAASNETSAAGAKENQFSSYLTNAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRMTE 80

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A+  L  ++ +R+K L A ++V  MQ
Sbjct: 81  AQLALQTAVQVRNKCLEAYNDVKNMQ 106


>gi|257875990|ref|ZP_05655643.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257810156|gb|EEV38976.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 107

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQ 81
                N     G+    FS+ L              +  ++  + G  + +   +  + +
Sbjct: 21  TGAASNETSAAGAKENQFSSYLTHAVDQLNQKTAVMDQDTVNLITGDESDLGNVMIRMTE 80

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A+  L  ++ +R+K L A ++V  MQ
Sbjct: 81  AQLALQTAVQVRNKCLEAYNDVKNMQ 106


>gi|121997301|ref|YP_001002088.1| flagellar hook-basal body complex subunit FliE [Halorhodospira
           halophila SL1]
 gi|121588706|gb|ABM61286.1| flagellar hook-basal body complex subunit FliE [Halorhodospira
           halophila SL1]
          Length = 103

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 1/96 (1%)

Query: 14  SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
                +           ++       FS LL+   +    +   A+ ++ A + G    +
Sbjct: 8   QALAEMRAIGGQPVQQPQQDSPPVEEFSDLLRQAVEQVNDNQVDAKGMTDAFMNGEDVQL 67

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +  + +A+ +      +R+++L A  E++ MQ+
Sbjct: 68  TDVMMSVQKADVSFEAMKEVRNQLLEAYQEIANMQV 103


>gi|157692299|ref|YP_001486761.1| flagellar hook-basal body protein FliE [Bacillus pumilus SAFR-032]
 gi|194014927|ref|ZP_03053544.1| flagellar hook-basal body complex protein (FliE) [Bacillus pumilus
           ATCC 7061]
 gi|157681057|gb|ABV62201.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194013953|gb|EDW23518.1| flagellar hook-basal body complex protein (FliE) [Bacillus pumilus
           ATCC 7061]
          Length = 105

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +   + F               + +     S  +FS +L++  +       K++  + A 
Sbjct: 2   VNAISPFQLQAAQQASELTNASSVHAAAPKSQTNFSDVLKNSIEALNQSQLKSDQYTNAL 61

Query: 66  LQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            QG   ++ E +    +A  TL  +   R+K + A  E+ +MQ+
Sbjct: 62  AQGKDVNLDEVMIASQKASVTLTAATEFRNKAVEAYQEIMRMQM 105


>gi|149201594|ref|ZP_01878568.1| flagellar protein FliE [Roseovarius sp. TM1035]
 gi|149144642|gb|EDM32671.1| flagellar protein FliE [Roseovarius sp. TM1035]
          Length = 108

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  I  + S +  +       D  Q       +    F+  L    +       KA  
Sbjct: 1   MSLTGISSSVSMMHASQAAAR-PDPIQRPTAMADAQGPGFAERLGKAVESVNTQQSKASQ 59

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+T ++   +     A     +++ +R+K L+A  ++  M +
Sbjct: 60  AARDFETGRTENLAAVMVEQQVASLGFQMTMQVRNKALTAYRDIMNMPV 108


>gi|170748651|ref|YP_001754911.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655173|gb|ACB24228.1| flagellar hook-basal body complex subunit FliE [Methylobacterium
           radiotolerans JCM 2831]
          Length = 104

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 45/98 (45%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           +  ++    G+         +    +   F  +L            +A++ +++A  GK 
Sbjct: 7   AAGAYAAVQGLAGGRPAPRVQPTTGTGTDFMQMLGQTLDSVGDAGRRADSQAVSAAAGKA 66

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ + V  + ++E  L   +A+RD+++SA  E+ +MQI
Sbjct: 67  NVVDVVTAVAESETALQTMVAVRDRMISAYEEIMRMQI 104


>gi|85058032|ref|YP_453734.1| flagellar hook-basal body complex protein FliE [Sodalis
           glossinidius str. 'morsitans']
 gi|123520367|sp|Q2NWZ6|FLIE_SODGM RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|84778552|dbj|BAE73329.1| flagellar hook-basal body complex protein FliE [Sodalis
           glossinidius str. 'morsitans']
          Length = 107

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 2/107 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
              Q  +S ++  +    +      +     ++   F + L    K   G   +A   + 
Sbjct: 1   MTTQAIHSVLAMMNITAEQAAGNTLTLSAPATAGAGFMSELNSSIKQINGMQIEARRKAE 60

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + +A   L+L I + +K+++A  EV  M +
Sbjct: 61  KFELGVPGIALNDVMVDMQKASLALHLGIQVNNKLINAYQEVMNMAV 107


>gi|315648138|ref|ZP_07901239.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
           vortex V453]
 gi|315276784|gb|EFU40127.1| flagellar hook-basal body complex subunit FliE [Paenibacillus
           vortex V453]
          Length = 102

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 41/99 (41%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+  S      ++      +      S   F + L +         + A  ++   + G+
Sbjct: 4   NAMFSVQGVQPLQLQEQVKNGATPSESIRDFGSYLNEALNSVSAQEQNAHMMTDKLMIGQ 63

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ +A+    QA  ++ L+  +R+K++ A  E+ + QI
Sbjct: 64  VNVDQAMISAQQALLSIQLTTQVRNKVVEAYQEIMRTQI 102


>gi|332278896|ref|ZP_08391309.1| flagellar hook-basal body complex protein fliE [Shigella sp. D9]
 gi|332101248|gb|EGJ04594.1| flagellar hook-basal body complex protein fliE [Shigella sp. D9]
          Length = 114

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 11  MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 66

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 67  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|126730137|ref|ZP_01745949.1| putative flagellar hook-basal body complex protein [Sagittula
           stellata E-37]
 gi|126709517|gb|EBA08571.1| putative flagellar hook-basal body complex protein [Sagittula
           stellata E-37]
          Length = 97

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 40/90 (44%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
              +Y  ++ + E   + P    A    + +  +  +  AE  S  A+ G       V+ 
Sbjct: 8   AAQKYAASRPAMEPDSADPTKMEADFARVTEDFVQQLRAAEETSQEAMTGDADPHALVEA 67

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + Q+E  +   +A+RDK++ A  E+ +M +
Sbjct: 68  LAQSELAVETVVAVRDKVVEAYQEILRMPV 97


>gi|115353159|ref|YP_774998.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria AMMD]
 gi|172062014|ref|YP_001809666.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria MC40-6]
 gi|115283147|gb|ABI88664.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria AMMD]
 gi|171994531|gb|ACB65450.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria MC40-6]
          Length = 119

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGM-----RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +     +           T      G ++  +F++ ++       GD +
Sbjct: 6   MTANVSGIGSVLQQMQAMAAQAGGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 65

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 66  HALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 119


>gi|300854207|ref|YP_003779191.1| flagellar hook-basal body complex protein FliE [Clostridium
           ljungdahlii DSM 13528]
 gi|300434322|gb|ADK14089.1| flagellar hook-basal body complex protein FliE [Clostridium
           ljungdahlii DSM 13528]
          Length = 112

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TS 71
           IS         + ++++      +  SFS+LLQ+          +A N     + G    
Sbjct: 16  ISGNTQSQNVSNASKDNIVNNEDAVSSFSSLLQNKLDEVNNQQIQANNSINEFVSGDRND 75

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   +    QA+ +L L++ +R+K + A  E+++ Q+
Sbjct: 76  VANVMLDAEQAKMSLELAVQIRNKFVEAYQEINRTQL 112


>gi|108807203|ref|YP_651119.1| flagellar hook-basal body protein FliE [Yersinia pestis Antiqua]
 gi|108812453|ref|YP_648220.1| flagellar hook-basal body protein FliE [Yersinia pestis Nepal516]
 gi|145598581|ref|YP_001162657.1| flagellar hook-basal body protein FliE [Yersinia pestis Pestoides
           F]
 gi|149366221|ref|ZP_01888256.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           CA88-4125]
 gi|161511404|ref|NP_992918.2| flagellar hook-basal body protein FliE [Yersinia pestis biovar
           Microtus str. 91001]
 gi|162421841|ref|YP_001606486.1| flagellar hook-basal body protein FliE [Yersinia pestis Angola]
 gi|165925933|ref|ZP_02221765.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938706|ref|ZP_02227261.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010851|ref|ZP_02231749.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166210696|ref|ZP_02236731.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167401094|ref|ZP_02306597.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420272|ref|ZP_02312025.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425878|ref|ZP_02317631.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468922|ref|ZP_02333626.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           FV-1]
 gi|170024615|ref|YP_001721120.1| flagellar hook-basal body protein FliE [Yersinia pseudotuberculosis
           YPIII]
 gi|218928952|ref|YP_002346827.1| flagellar hook-basal body protein FliE [Yersinia pestis CO92]
 gi|229896278|ref|ZP_04511448.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Pestoides A]
 gi|229897214|ref|ZP_04512370.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229897941|ref|ZP_04513092.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229902828|ref|ZP_04517945.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Nepal516]
 gi|270486614|ref|ZP_06203688.1| flagellar hook-basal body complex protein FliE [Yersinia pestis KIM
           D27]
 gi|294504002|ref|YP_003568064.1| flagellar basal body protein [Yersinia pestis Z176003]
 gi|38503119|sp|Q8ZF85|FLIE_YERPE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|108776101|gb|ABG18620.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Nepal516]
 gi|108779116|gb|ABG13174.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Antiqua]
 gi|115347563|emb|CAL20472.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           CO92]
 gi|145210277|gb|ABP39684.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Pestoides F]
 gi|149292634|gb|EDM42708.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           CA88-4125]
 gi|162354656|gb|ABX88604.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           Angola]
 gi|165913320|gb|EDR31942.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922137|gb|EDR39314.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990195|gb|EDR42496.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207876|gb|EDR52356.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961967|gb|EDR57988.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049483|gb|EDR60891.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055277|gb|EDR65074.1| flagellar hook-basal body complex protein (FliE) [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751149|gb|ACA68667.1| flagellar hook-basal body complex subunit FliE [Yersinia
           pseudotuberculosis YPIII]
 gi|229680275|gb|EEO76374.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Nepal516]
 gi|229688982|gb|EEO81047.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229693551|gb|EEO83600.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229701201|gb|EEO89230.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Pestoides A]
 gi|262366052|gb|ACY62609.1| flagellar basal body protein [Yersinia pestis D182038]
 gi|270335118|gb|EFA45895.1| flagellar hook-basal body complex protein FliE [Yersinia pestis KIM
           D27]
 gi|294354461|gb|ADE64802.1| flagellar basal body protein [Yersinia pestis Z176003]
 gi|320015430|gb|ADV99001.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 103

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSAKTLPAEA----GFASELKAAIGKISENQQVARTSAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + +  ++  +L L I +R+K+++A  EV  M +
Sbjct: 57  NFELGVPGVGLNDVMVNAQKSSVSLQLGIQVRNKLVAAYQEVMNMGV 103


>gi|289678990|ref|ZP_06499880.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           syringae FF5]
 gi|302185563|ref|ZP_07262236.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           syringae 642]
 gi|330940718|gb|EGH43726.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330972434|gb|EGH72500.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 109

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEVGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|51596040|ref|YP_070231.1| flagellar hook-basal body protein FliE [Yersinia pseudotuberculosis
           IP 32953]
 gi|186895145|ref|YP_001872257.1| flagellar hook-basal body protein FliE [Yersinia pseudotuberculosis
           PB1/+]
 gi|51589322|emb|CAH20943.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis IP 32953]
 gi|186698171|gb|ACC88800.1| flagellar hook-basal body complex subunit FliE [Yersinia
           pseudotuberculosis PB1/+]
          Length = 103

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +QG    +       ++   +  +          F++ L+        + + A   + 
Sbjct: 1   MSVQGIEGVLQQLQVTALQASGSAKNLPAEA----GFASELKAAIGKISENQQVARTSAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + + +  ++  +L L I +R+K+++A  EV  M +
Sbjct: 57  NFELGVPGVGLNDVMVNAQKSSVSLQLGIQVRNKLVAAYQEVMNMGV 103


>gi|283954186|ref|ZP_06371711.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794465|gb|EFC33209.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 98

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            + ++        F+ +L++         E  E        G+   + +A   I +AE +
Sbjct: 16  TSKSQNSTGIGDEFAKMLKNEIDDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESS 75

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +   + +R+K +SA  E+++ QI
Sbjct: 76  MKFMLEVRNKAISAYKEITRTQI 98


>gi|170734415|ref|YP_001766362.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia MC0-3]
 gi|206558927|ref|YP_002229687.1| flagellar hook-basal body complex protein FliE [Burkholderia
           cenocepacia J2315]
 gi|38503099|sp|Q8VQP8|FLIE_BURCJ RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|18182537|gb|AAL65159.1|AF453480_1 flagellar hook-basal body protein [Burkholderia cepacia]
 gi|169817657|gb|ACA92240.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia MC0-3]
 gi|198034964|emb|CAR50836.1| flagellar hook-basal body complex protein FliE [Burkholderia
           cenocepacia J2315]
          Length = 114

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE-----GGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +    ++  +      S        G ++  +F++ ++       GD +
Sbjct: 1   MTANVSGIGSVLQQMQSMAAQASGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  HALGEAKAFEVGAPNISLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 114


>gi|296157431|ref|ZP_06840266.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           Ch1-1]
 gi|295892203|gb|EFG71986.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           Ch1-1]
          Length = 111

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   +   +S +    ++  +      +  +    ++P  F++ L+       GD  KA 
Sbjct: 1   MTFPVNALSSALQQMQSMAAQAAGGSTAVADTSSAATPTGFASALKASLDKISGDQTKAI 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  GESKAFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV 111


>gi|144900467|emb|CAM77331.1| flagellar hook-basal body complex protein FliE [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 105

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +    +F       GM        +         F+++L+D AK ++  +++ E  S 
Sbjct: 6   NAVNAYAAFAKLPSAEGMEA-----RDTPTPVPGSDFASVLKDAAKMSLNAVKQGEQASA 60

Query: 64  AALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AA+ GK  +RE V  +  AE TL   + +RDK+++A +E+ +M I
Sbjct: 61  AAIAGKADIREVVAAVNNAEMTLETVVTVRDKVINAYNEILRMPI 105


>gi|213967562|ref|ZP_03395710.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tomato T1]
 gi|301385733|ref|ZP_07234151.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059422|ref|ZP_07250963.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tomato K40]
 gi|302134813|ref|ZP_07260803.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|38502974|sp|Q884X9|FLIE_PSESM RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|213927863|gb|EEB61410.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           tomato T1]
 gi|330876009|gb|EGH10158.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967110|gb|EGH67370.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017005|gb|EGH97061.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 109

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEVGKSGIDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|319787101|ref|YP_004146576.1| flagellar hook-basal body complex subunit FliE [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465613|gb|ADV27345.1| flagellar hook-basal body complex subunit FliE [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 125

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQ 81
              Q      G++  SF+  L    +G      KA  +  A  +G     +   +    Q
Sbjct: 39  GGMQAPGATQGTAAPSFTQTLARALEGVNAAQAKAGELQTAFERGDPGADLARVMIASQQ 98

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           ++     ++ +R++++ A  +V  M +
Sbjct: 99  SQVAFRATVEVRNRLVQAYQDVMNMPL 125


>gi|170696758|ref|ZP_02887870.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           graminis C4D1M]
 gi|170138337|gb|EDT06553.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           graminis C4D1M]
          Length = 116

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q  +S  +              + E G ++   F++ L+       GD  KA   S 
Sbjct: 10  SALQQLHSMAAQATGGSTAATGASAAGESGAATAGGFASALKASLDKISGDQTKAIGESQ 69

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   G    S+ + +  + +A       + +R+K++SA +++ +MQ+
Sbjct: 70  AFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMQV 116


>gi|170743257|ref|YP_001771912.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           sp. 4-46]
 gi|168197531|gb|ACA19478.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           sp. 4-46]
          Length = 101

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 37/70 (52%)

Query: 39  SFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILS 98
            F  L+     G     ++ E+  +A   GK ++ + V  + ++E  L   +A+RD+++S
Sbjct: 32  GFGQLVASAIDGVEAAGKRGEHQMMAVGAGKANVVDVVTAVAESETALQTLVAVRDRVIS 91

Query: 99  AVSEVSKMQI 108
           A  ++ +MQI
Sbjct: 92  AYEDIMRMQI 101


>gi|86148945|ref|ZP_01067177.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596983|ref|ZP_01100219.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218562178|ref|YP_002343957.1| flagellar hook-basal body protein FliE [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|38503222|sp|Q9PHY8|FLIE_CAMJE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|85840303|gb|EAQ57560.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88190672|gb|EAQ94645.1| flagellar hook-basal body complex protein FliE [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359884|emb|CAL34672.1| flagellar hook-basal body complex protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|315927024|gb|EFV06379.1| Flagellar hook-basal body complex protein [Campylobacter jejuni
           subsp. jejuni DFVF1099]
 gi|315928562|gb|EFV07859.1| Flagellar hook-basal body complex protein [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 98

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERT 85
            N ++        F+ +L++         E  E        G+   + +A   I +AE +
Sbjct: 16  TNKSQNSTGIGDEFAKMLKNEINDLNKAQESGEAAMTDIATGQVKDLHQAAIAITKAESS 75

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
           +   + +R+K +SA  E+++ QI
Sbjct: 76  MKFMLEVRNKAISAYKEITRTQI 98


>gi|254462226|ref|ZP_05075642.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
           bacterium HTCC2083]
 gi|206678815|gb|EDZ43302.1| flagellar hook-basal body complex protein FliE [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 97

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 40/90 (44%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
              +Y  ++ + E   +     S    +  K     + ++EN++ AA+ G       V  
Sbjct: 8   ASQQYAASKPATEPKETKQTEISESFTNTFKDLSTTLAESENIAKAAMAGDADPHALVQA 67

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 68  LAQTELAVEAAVNVRNKVVEAYQEILRMPV 97


>gi|330818621|ref|YP_004362326.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           gladioli BSR3]
 gi|327371014|gb|AEA62370.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           gladioli BSR3]
          Length = 112

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS---FSALLQDMAKGAIGDMEKA 58
           M   + G  S +     +  +      +    G+   +   F+  L+           KA
Sbjct: 1   MTAPVNGIASALQQMQAMAAQASGASAAATAAGNGAATASGFAGALKASLDRISDTQMKA 60

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + A   G    S+ + +    +A   L   + +R+K++SA +++ +M +
Sbjct: 61  AGEAKAFELGAPNVSLNDVMIDSQKANIGLQFGLQVRNKLVSAYNDIMQMSV 112


>gi|15596297|ref|NP_249791.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
           PAO1]
 gi|107100551|ref|ZP_01364469.1| hypothetical protein PaerPA_01001576 [Pseudomonas aeruginosa PACS2]
 gi|218892936|ref|YP_002441805.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
           LESB58]
 gi|296390534|ref|ZP_06880009.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
           PAb1]
 gi|313106061|ref|ZP_07792320.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa 39016]
 gi|12230923|sp|Q51462|FLIE_PSEAE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704237|sp|B7UX89|FLIE_PSEA8 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|9947017|gb|AAG04489.1|AE004540_9 flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa PAO1]
 gi|218773164|emb|CAW28976.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa LESB58]
 gi|310878822|gb|EFQ37416.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa 39016]
          Length = 109

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 2/89 (2%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHI 79
                +           SFS +L           + +  ++ A   G+    + + +   
Sbjct: 21  AMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIAS 80

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  +      +R+K++ A  ++ +M +
Sbjct: 81  QKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|74317617|ref|YP_315357.1| flagellar hook-basal body protein FliE [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057112|gb|AAZ97552.1| flagellar hook-basal body complex protein FliE [Thiobacillus
           denitrificans ATCC 25259]
          Length = 114

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 29  SNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTL 86
           S  E  +S +SF +LL+          +++  ++     G    S+ +A+  + ++  + 
Sbjct: 33  SPVEQTTSRVSFESLLKSSLDQVNEVQQQSSALAQRFAMGDSTVSLSDAMISLQKSSISF 92

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
             ++ +R+K+++A  E+  M +
Sbjct: 93  QQTVQVRNKLVAAYQEIMNMGV 114


>gi|90579926|ref|ZP_01235734.1| flagellar hook-basal body protein [Vibrio angustum S14]
 gi|90438811|gb|EAS63994.1| flagellar hook-basal body protein [Vibrio angustum S14]
          Length = 103

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
            ++ G  + +               S          F  LL D  +       ++  ++ 
Sbjct: 1   MKVNGLQAEMQAMR----LDAQNTTSPATAQQVSSDFGNLLSDALQSVNQLQGQSSELAT 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              QG    S+ + +    ++      ++ +R+K++ A  E+  M +
Sbjct: 57  RFDQGDRSVSLADVMIARNKSSVAFEATVQVRNKMVQAYKELMNMPV 103


>gi|306820112|ref|ZP_07453760.1| flagellar hook-basal body complex protein FliE [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304551890|gb|EFM39833.1| flagellar hook-basal body complex protein FliE [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 98

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 1/91 (1%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVD 77
             +  +  +N  EE   S +SFS  L+          +    ++   + G+  ++ +   
Sbjct: 8   TTLPLNNIRNIGEEKQESNVSFSDFLKKAIYDVNDAKQYEAQLTRQLISGELENIHDLSI 67

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               A         +  K+  A  E++++QI
Sbjct: 68  AKGVASVKYQALTEVISKVTEAYKEITRLQI 98


>gi|237799233|ref|ZP_04587694.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022088|gb|EGI02145.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 109

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASNQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ASAFEVGKSGIDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|89899360|ref|YP_521831.1| flagellar hook-basal body complex protein [Rhodoferax ferrireducens
           T118]
 gi|89344097|gb|ABD68300.1| flagellar hook-basal body complex protein [Rhodoferax ferrireducens
           T118]
          Length = 105

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 40/100 (40%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQG 68
           S  +   T+        +S++  G +   FS  L+            A  +   +     
Sbjct: 6   SPTTMPTTVRPTLAPRLSSSQVTGGADGGFSGALKSALSSVSAAQNDATRLQREVQMENP 65

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +  I +A+     ++ +R++++ A +++  MQ+
Sbjct: 66  NVSLEETMVAIQKAQIGFQATLHVRNRMVQAYTDIMNMQV 105


>gi|115523572|ref|YP_780483.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           BisA53]
 gi|115517519|gb|ABJ05503.1| flagellar hook-basal body complex subunit FliE [Rhodopseudomonas
           palustris BisA53]
          Length = 109

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGG--SSPISFSALLQDMAKGAIGDMEKAE 59
           M       N++ S    IG                +   SF  LL+      +    KA+
Sbjct: 1   MATPTVAANAYASLARIIGSGTGAAGGVAAVKPLDADGQSFGDLLKTATGSVVDAGRKAD 60

Query: 60  NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++A   GK+++ + V  + + +  ++  +++RD+++ +  E+ +MQI
Sbjct: 61  AQTMAMASGKSNVMDVVTAVAETDVAVSTLVSVRDRVIQSYEEIMRMQI 109


>gi|227820857|ref|YP_002824827.1| flagellar hook-basal body protein FliE [Sinorhizobium fredii
           NGR234]
 gi|254789311|sp|C3MG23|FLIE_RHISN RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|227339856|gb|ACP24074.1| predicted flagellar hook-basal body complex protein FliE
           [Sinorhizobium fredii NGR234]
          Length = 111

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIG----MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           MI+ IQ   +F +  +  G         +  S         SF+ +L  M   AI  M+ 
Sbjct: 1   MIDAIQSVGAFSNLKEAEGTSLTASTALSLPSAGASAPQSQSFAEVLGTMTTDAIRSMKS 60

Query: 58  AENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE VSL A++G+ + RE VD +M AE++L  ++A+RDK+++A  E+++MQI
Sbjct: 61  AEGVSLQAIRGEANTREVVDAVMNAEQSLQTALAIRDKVVTAYLEIARMQI 111


>gi|227873554|ref|ZP_03991797.1| hypothetical protein HMPREF6123_1736 [Oribacterium sinus F0268]
 gi|227840600|gb|EEJ50987.1| hypothetical protein HMPREF6123_1736 [Oribacterium sinus F0268]
          Length = 105

 Score = 60.4 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 1/89 (1%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVD 77
           IG      Q +   G      F  + +             EN       G+ +       
Sbjct: 15  IGSVGSIDQGTQVGGTEGARLFKDVFRSAIDNVKTSQLDVENKQYLLATGQLSDAHSLPI 74

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKM 106
              +A+ +L+L ++LR+K L   +E+ K+
Sbjct: 75  AEAKAQISLDLLVSLRNKALEGYNELMKI 103


>gi|116691081|ref|YP_836704.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia HI2424]
 gi|116649170|gb|ABK09811.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           cenocepacia HI2424]
          Length = 119

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE-----GGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +    ++  +      S        G ++  +F++ ++       GD +
Sbjct: 6   MTANVSGIGSVLQQMQSMAAQASGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 65

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 66  HALGEAKAFEVGAPNISLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 119


>gi|260598446|ref|YP_003211017.1| flagellar hook-basal body complex protein fliE [Cronobacter
           turicensis z3032]
 gi|260217623|emb|CBA31911.1| Flagellar hook-basal body complex protein fliE [Cronobacter
           turicensis z3032]
          Length = 103

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +               +N       +SF+  LQ            A   S 
Sbjct: 1   MAIQGIEGVLQQMQATMQVA----RNNAVETPPSVSFAGELQAALGRISDTQNAARTQSE 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  +L + + +R+K+++A  ++  MQ+
Sbjct: 57  KFAIGTPGVALNDVMVDLQKSSISLQMGVQVRNKLVAAYQDIMNMQV 103


>gi|296124188|ref|YP_003631966.1| flagellar hook-basal body complex subunit FliE [Planctomyces
           limnophilus DSM 3776]
 gi|296016528|gb|ADG69767.1| flagellar hook-basal body complex subunit FliE [Planctomyces
           limnophilus DSM 3776]
          Length = 111

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 1/108 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI Q     +                  +       +SF+ LL        G  ++  + 
Sbjct: 4   MISQPAFFPAPGQAVPFTAWSQPLALPESVPNTQPTVSFADLLSQSLDATNGQQQQMHSQ 63

Query: 62  SLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +L G   SM E      +A+  L L++ +R+K++ A  E+  MQ+
Sbjct: 64  IAGSLTGSDLSMVETFSAAREADLALKLTLQIRNKLIEAYREIQNMQL 111


>gi|307131588|ref|YP_003883604.1| flagellar hook-basal body complex protein fliE [Dickeya dadantii
           3937]
 gi|18642463|emb|CAD22874.1| hook-basal body complex protein [Erwinia chrysanthemi]
 gi|306529117|gb|ADM99047.1| Flagellar hook-basal body complex protein fliE [Dickeya dadantii
           3937]
          Length = 104

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG ++ +        +        +   +S   F++ L+   +       +A+  + 
Sbjct: 1   MSIQGIDAVLQQMQITATKAAGG---PDSNVASQAGFASELKAALEKINETRTQAQTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK   ++ + +    +A   L + + +R+K++SA  EV  M I
Sbjct: 58  AFTLGKPGVALNDVMVDNQKASIALQMGVQVRNKLVSAYQEVMNMTI 104


>gi|301018214|ref|ZP_07182729.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           69-1]
 gi|300399801|gb|EFJ83339.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           69-1]
          Length = 106

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS   T  M     ++  +      ISF+  L             A  
Sbjct: 1   MKMSAIQGIEGVISQLQTTAMSARALESLPQPT----ISFAGQLHAALDRISDTQTAART 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|186477677|ref|YP_001859147.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           phymatum STM815]
 gi|184194136|gb|ACC72101.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           phymatum STM815]
          Length = 111

 Score = 60.4 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS--NEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   I    + +    ++  +      +  NE G ++   F++ L+        D + A 
Sbjct: 1   MTAPINPLQAALQQMQSMAAQAAGGSAAVANESGAATAGGFASALKASIDKISSDQKSAV 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + A   G    S+ + +  + +A       + +R+K++SA +++ ++ +
Sbjct: 61  SEAHAFEIGAPNVSLNDVMIDMQKANVGFQFGLQVRNKLVSAYNDIMQIAV 111


>gi|91791421|ref|YP_561072.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
 gi|91713423|gb|ABE53349.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
          Length = 96

 Score = 60.4 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 1/95 (1%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMR 73
             + I                  +SF  +L D       DM  A  +     +G+  ++ 
Sbjct: 2   EIEAIRALEVTGNIPLAPSQLPEVSFVEMLGDGVHKVSNDMNVANELVEKFARGEPIAVD 61

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           E +  + QA+ +L L++ +++K+ +A  E+ +MQ+
Sbjct: 62  EVMVAMEQAQLSLKLAVEVKNKLTAAYQELFRMQV 96


>gi|116049029|ref|YP_792169.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254239469|ref|ZP_04932791.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa 2192]
 gi|122258137|sp|Q02IR7|FLIE_PSEAB RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|115584250|gb|ABJ10265.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126192847|gb|EAZ56910.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa 2192]
          Length = 109

 Score = 60.4 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +       +   SFS +L           + +  +
Sbjct: 1   MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAEAGAPSFSEMLSQAVDKVNETQQASTAM 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|330899424|gb|EGH30843.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330975996|gb|EGH76062.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 109

 Score = 60.4 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ASAFEVGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|126738581|ref|ZP_01754286.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. SK209-2-6]
 gi|126720380|gb|EBA17086.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. SK209-2-6]
          Length = 99

 Score = 60.4 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 34/95 (35%)

Query: 14  SHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMR 73
           S T            +  +   +  S    L+         +   E  ++ ++   +   
Sbjct: 5   SVTSAASGYTAARPATKVDPDFNGPSAGDQLKSSFAQFANTLRATETTAVQSMTSSSDPH 64

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 65  ALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 99


>gi|94968681|ref|YP_590729.1| flagellar hook-basal body complex protein (FliE) [Candidatus
           Koribacter versatilis Ellin345]
 gi|94550731|gb|ABF40655.1| flagellar hook-basal body complex protein (FliE) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 96

 Score = 60.4 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQ 81
               Q  + E       F   L+            A+      L GK   +  A   I +
Sbjct: 10  SAVGQAWSSEAQGKSSGFLDSLKSAISDVEDQHTDAQTKLANLLTGKGEDVHSAAIAIEK 69

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A  +  L + LR+K ++A  EV++MQ
Sbjct: 70  ASLSFELMMQLRNKAVAAYQEVARMQ 95


>gi|330825276|ref|YP_004388579.1| flagellar hook-basal body complex protein fliE [Alicycliphilus
           denitrificans K601]
 gi|329310648|gb|AEB85063.1| Flagellar hook-basal body complex protein fliE [Alicycliphilus
           denitrificans K601]
          Length = 102

 Score = 60.0 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N   +    +       +  ++        F   ++           ++  +S     G
Sbjct: 1   MNVITNPLGALLPVIPVGKLVSKAPIVQDGGFLDAMKQALATTSQLQSESGRLSREVTFG 60

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ E +   +++      ++  R++I+ A ++V  MQ+
Sbjct: 61  NPTVSLEETMLAGVKSNIAFQATLQSRNRIVQAYTDVMNMQV 102


>gi|332702979|ref|ZP_08423067.1| Flagellar hook-basal body complex protein fliE [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553128|gb|EGJ50172.1| Flagellar hook-basal body complex protein fliE [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 108

 Score = 60.0 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M        ++    D           S      +   F+  +    K       +  ++
Sbjct: 1   MSVSNVAMKAYSKALDAHKEAEKKALGSASYNPDAESGFTKTMNASLKKVNDLQLEKNSM 60

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
             A   G+  ++ E +  I +A   +N++ A+R+KI++A  E+ +M
Sbjct: 61  VEAFASGENQNVHELMIQIQKAGLAINMTSAVRNKIMTAYQEIMRM 106


>gi|170722858|ref|YP_001750546.1| flagellar hook-basal body protein FliE [Pseudomonas putida W619]
 gi|226704238|sp|B1JC95|FLIE_PSEPW RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|169760861|gb|ACA74177.1| flagellar hook-basal body complex subunit FliE [Pseudomonas putida
           W619]
          Length = 110

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREA 75
                      +  E      SF+ +L           + +  ++ A   GK    + + 
Sbjct: 18  QADAMSLPKATAAPELAEGQSSFADMLGQAIGKVHQTQQASTQLANAFEIGKSGVDLTDV 77

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    +A  ++     +R+K++ A  ++ +M +
Sbjct: 78  MIASQKASVSMQALTQVRNKLVQAYQDIMQMPV 110


>gi|39936947|ref|NP_949223.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           CGA009]
 gi|192292775|ref|YP_001993380.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           TIE-1]
 gi|39650804|emb|CAE29327.1| Flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris CGA009]
 gi|192286524|gb|ACF02905.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris TIE-1]
          Length = 101

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEE-GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             S IS  +         + +  + GG    SF  L++      +    K++  S+A   
Sbjct: 1   MASPISAANAYASLARLAKPAGADKGGEDAPSFGNLVKQAMGSVLDAGRKSDAQSMAMAS 60

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           GK+++ + V  + + +  ++  +++RD+++ +  E+ +M I
Sbjct: 61  GKSNVMDVVTAVAETDVAVSTLVSVRDRVIQSYEEIMRMPI 101


>gi|331673451|ref|ZP_08374219.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA280]
 gi|331069649|gb|EGI41036.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA280]
          Length = 106

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M     ++         ISF+  L             A  
Sbjct: 1   MKMSAIQGIEGVISQLQATAMNARAQESLPHPT----ISFAGQLHAALDRISDTQTAART 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|119503662|ref|ZP_01625745.1| flagellar hook-basal body protein FliE [marine gamma
           proteobacterium HTCC2080]
 gi|119460724|gb|EAW41816.1| flagellar hook-basal body protein FliE [marine gamma
           proteobacterium HTCC2080]
          Length = 106

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N  ++   T+  +   ++  +         FS+L+          ++ ++ ++     
Sbjct: 5   AINQVLAQMRTMASQA-TSEPKSGLDSVGGAGFSSLMSQSLNEVNESIQVSKGLAQQFES 63

Query: 68  GK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G    S+ E +    +A         +R+K+L+A  EV  MQ+
Sbjct: 64  GDPSVSLAEVMVTAQKASLQFTGMTEVRNKLLNAYQEVMNMQV 106


>gi|226313071|ref|YP_002772965.1| flagellar hook-basal body complex protein FliE [Brevibacillus
           brevis NBRC 100599]
 gi|226096019|dbj|BAH44461.1| flagellar hook-basal body complex protein FliE [Brevibacillus
           brevis NBRC 100599]
          Length = 98

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAE 83
               +          FS+ L D          ++ N++     G+ T + +      +A 
Sbjct: 14  TPSVNKPTPAEVSQEFSSFLSDAMDKVNQAQVESSNLADKFAAGEITDVHQLTVAGQKAS 73

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
             L +++ +R+K++ +  E+ +M I
Sbjct: 74  VMLQMTMQVRNKMIESYQEIMRMSI 98


>gi|160896086|ref|YP_001561668.1| flagellar hook-basal body complex subunit FliE [Delftia acidovorans
           SPH-1]
 gi|160361670|gb|ABX33283.1| flagellar hook-basal body complex subunit FliE [Delftia acidovorans
           SPH-1]
          Length = 109

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMREAVD 77
                     +     +   FS  LQ   +        +  +   +       S+ E + 
Sbjct: 19  TQLPKGVGAGDASTKVAAGGFSQALQGALQSVSSAQNNSSQLQREVQLENPAVSLEETMI 78

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +A+     ++ +R++++ A ++V  MQ+
Sbjct: 79  AMQKAQIGFQATMQVRNRLVQAYTDVMNMQV 109


>gi|156933443|ref|YP_001437359.1| hypothetical protein ESA_01261 [Cronobacter sakazakii ATCC BAA-894]
 gi|166214850|sp|A7MJJ7|FLIE_ENTS8 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|156531697|gb|ABU76523.1| hypothetical protein ESA_01261 [Cronobacter sakazakii ATCC BAA-894]
          Length = 103

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +               +N       +SF+  LQ            A   + 
Sbjct: 1   MAIQGIEGVLQQMQATMQVA----RNNAVETPPSVSFAGELQAALGRISDTQNAARTQAE 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  +L + I +R+K+++A  ++  MQ+
Sbjct: 57  KFAIGTPGVALNDVMVDLQKSSISLQMGIQVRNKLVAAYQDIMNMQV 103


>gi|261407985|ref|YP_003244226.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
           Y412MC10]
 gi|329929283|ref|ZP_08283036.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
           HGF5]
 gi|261284448|gb|ACX66419.1| flagellar hook-basal body complex subunit FliE [Paenibacillus sp.
           Y412MC10]
 gi|328936652|gb|EGG33095.1| flagellar hook-basal body complex protein FliE [Paenibacillus sp.
           HGF5]
          Length = 102

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 41/99 (41%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+  S      ++      +      S   F + L +         + A  +S   + G+
Sbjct: 4   NAMFSVQGVQPLQMQEQVKNGATPSESIRDFGSYLNEALNSVAAQEQNAHVMSDKLMIGQ 63

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ +A+    QA  ++ L+  +R+K++ A  E+ + QI
Sbjct: 64  VNVDQAMISAQQALLSIQLTTQVRNKVVEAYQEIMRTQI 102


>gi|91976173|ref|YP_568832.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           BisB5]
 gi|91682629|gb|ABE38931.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris BisB5]
          Length = 101

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   I   N++ S                 +   +  SF A++++     +    K++  
Sbjct: 1   MASPISAANAYASLARLANPAGA------GKQTDNGPSFGAMVKEAMGSVLDAGRKSDAQ 54

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A   GK+++ + V  + + +  ++  +++RD+++ +  ++ +M I
Sbjct: 55  TVAMANGKSNIMDVVTAVAETDVAVSTLVSVRDRVIQSYEDILRMPI 101


>gi|308050037|ref|YP_003913603.1| flagellar hook-basal body complex subunit FliE [Ferrimonas
           balearica DSM 9799]
 gi|307632227|gb|ADN76529.1| flagellar hook-basal body complex subunit FliE [Ferrimonas
           balearica DSM 9799]
          Length = 115

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 2/99 (2%)

Query: 12  FISHTDTIGMRYDFTQNSN-EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
            I+     G         + + G ++  SFS L+        GD  +A+ +  A   G++
Sbjct: 17  QINRERAAGEIAIGPNPMDRQPGVTAVPSFSELMNHKVNEISGDQNRADAMRTAVDLGRS 76

Query: 71  S-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +  A+    +A  + +  + +R+K+++A  +V KM +
Sbjct: 77  DDLVGAMVASQKASLSFSALMQVRNKLVTAFDDVMKMPL 115


>gi|119947168|ref|YP_944848.1| flagellar hook-basal body complex subunit FliE [Psychromonas
           ingrahamii 37]
 gi|119865772|gb|ABM05249.1| flagellar hook-basal body complex subunit FliE [Psychromonas
           ingrahamii 37]
          Length = 107

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 3/109 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I      N+   H   I         +N    +  + FS  L  +          A  
Sbjct: 1   MNISATSLLNA--DHLQKISDIKSSPIKANNFAATPQVDFSKTLISVLNSVNDQQVSATQ 58

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   GK+  +  AV    +A  +    + +R+K+LS+  EV KM +
Sbjct: 59  KINAVELGKSDDLIGAVVAAQKASLSFTALMQVRNKLLSSFDEVMKMSV 107


>gi|330809236|ref|YP_004353698.1| flagellar hook-basal body complex protein fliE [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377344|gb|AEA68694.1| Putative Flagellar hook-basal body complex protein fliE
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 101

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
             + I+              ++   G     F  LL+  A        +A  +  A   G
Sbjct: 1   MTAAIAPIALTPDLTPAAALADGPMGPQGTDFVDLLKSGATQLNAQTGQASEMLSAYALG 60

Query: 69  -KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +  + V  + QA+ +L L++ +R++++ A  E++++QI
Sbjct: 61  DNIAPHDLVMAMEQAKLSLQLAVEVRNRLVDAYQELTRLQI 101


>gi|152984357|ref|YP_001349625.1| flagellar hook-basal body protein FliE [Pseudomonas aeruginosa PA7]
 gi|166214853|sp|A6V990|FLIE_PSEA7 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|150959515|gb|ABR81540.1| flagellar hook-basal body complex protein (FliE) [Pseudomonas
           aeruginosa PA7]
          Length = 109

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +       +   SFS +L           + +  +
Sbjct: 1   MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAEAGAPSFSEMLSQAVGKVNETQQASTAM 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109


>gi|66046687|ref|YP_236528.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257394|gb|AAY38490.1| Flagellar hook-basal body complex protein FliE [Pseudomonas
           syringae pv. syringae B728a]
          Length = 111

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             +  +    +   SF+ +L           + +  +
Sbjct: 3   MSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 62

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 63  ANAFEVGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 111


>gi|239909139|ref|YP_002955881.1| flagellar hook-basal body complex protein FliE [Desulfovibrio
           magneticus RS-1]
 gi|239799006|dbj|BAH77995.1| flagellar hook-basal body complex protein FliE [Desulfovibrio
           magneticus RS-1]
          Length = 108

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M        ++ +     G        S  +  +    F  +L D  K         + +
Sbjct: 1   MAIPSLALAAYQNALSQSGAIEAKVSRSLAKPAAPAEGFGQMLTDSVKRVNDMQNGKDAM 60

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
             +   G+T ++ E + ++ +A   + ++ A+R K++ A  E+ K+Q
Sbjct: 61  VESFASGQTQNVHELMINLQKASSAMQMTTAVRGKVIEAYRELVKIQ 107


>gi|167568367|ref|ZP_02361241.1| flagellar hook-basal body complex protein [Burkholderia
           oklahomensis C6786]
          Length = 100

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQ 81
             T      G ++  SF++ ++       GD +KA   + A   G    S+ + +  + +
Sbjct: 14  SPTAALAGSGAATAGSFASAMKASLDKISGDQQKALGEARAFELGAQNVSLNDVMVDMQK 73

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A       + +R+K++SA +E+ +M +
Sbjct: 74  ANIGFQFGLQVRNKLVSAYNEIMQMSV 100


>gi|90423030|ref|YP_531400.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           BisB18]
 gi|90105044|gb|ABD87081.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris BisB18]
          Length = 105

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M       N++ S    +           + G     SF  +L++     +    K++  
Sbjct: 1   MATPTVAANAYASLARIMESAGGAGAKPTDLG--GGQSFGDVLKNAVGSVLDSGRKSDAQ 58

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A   GK+++ + V  + + +  ++  +++RD+++ +  ++ KM I
Sbjct: 59  TVAMASGKSNVMDVVTAVAETDVAVSTLVSVRDRMIQSYEDIMKMSI 105


>gi|161526229|ref|YP_001581241.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           multivorans ATCC 17616]
 gi|189349057|ref|YP_001944685.1| flagellar hook-basal body complex protein [Burkholderia multivorans
           ATCC 17616]
 gi|226704223|sp|A9ABS7|FLIE_BURM1 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|160343658|gb|ABX16744.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           multivorans ATCC 17616]
 gi|189333079|dbj|BAG42149.1| flagellar hook-basal body complex protein [Burkholderia multivorans
           ATCC 17616]
          Length = 114

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI-----SFSALLQDMAKGAIGDME 56
           M   + G  S +     +  +      S     +        +F++ ++       GD +
Sbjct: 1   MTANVSGIGSVLQQMQAMAAQASGGVASPAAALAGSGAATAGTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A   + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  RALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 114


>gi|216264184|ref|ZP_03436176.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 156a]
 gi|224533122|ref|ZP_03673722.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
 gi|226320593|ref|ZP_03796153.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|215980657|gb|EEC21464.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 156a]
 gi|224511849|gb|EEF82250.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
 gi|226234012|gb|EEH32733.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
          Length = 111

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V+  A+       + + V  + +A  
Sbjct: 29  SSKSNAKDNDIKTFKDVLINSITDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGVKAYQDIINI 110


>gi|264676593|ref|YP_003276499.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni CNB-2]
 gi|299531262|ref|ZP_07044672.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni S44]
 gi|262207105|gb|ACY31203.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni CNB-2]
 gi|298720669|gb|EFI61616.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni S44]
          Length = 102

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKT 70
           I   +   +    T+  +         F   LQ+  +        +  +   +       
Sbjct: 5   IPAINPAQLGNQLTKVGSAGTAPVAGGFGQALQNALQSVSAAQNHSGQLQREVQLENPAV 64

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+ + +  + +++     ++ +R++++ A S+V  MQ+
Sbjct: 65  SLEQTMVAMQKSQIGFQATLHVRNRLVQAYSDVMNMQV 102


>gi|195941354|ref|ZP_03086736.1| flagellar hook-basal body protein FliE [Borrelia burgdorferi 80a]
 gi|221217774|ref|ZP_03589242.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 72a]
 gi|223888855|ref|ZP_03623446.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 64b]
 gi|226321610|ref|ZP_03797136.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
 gi|1165276|gb|AAA85615.1| FliE [Borrelia burgdorferi]
 gi|221192451|gb|EEE18670.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 72a]
 gi|223885671|gb|EEF56770.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi 64b]
 gi|226232799|gb|EEH31552.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
          Length = 110

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V+  A+       + + V  + +A  
Sbjct: 28  SSKSNAKDNDIKTFKDVLINSITDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANM 87

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 88  NLSILKAVVERGVKAYQDIINI 109


>gi|296103557|ref|YP_003613703.1| flagellar hook-basal body protein FliE [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058016|gb|ADF62754.1| flagellar hook-basal body protein FliE [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 104

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    IS      M     +N N       ISF+  L             A   + 
Sbjct: 1   MAIQGIEGVISQLQATAMTA---RNQNVAEQQPTISFAGQLHAALDRISDTQTAARTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++ + +  + +A  +L + I +R+K++SA  EV  MQ+
Sbjct: 58  KFTLGEPGVALNDVMTDLQKASVSLQMGIQVRNKLVSAYQEVMGMQV 104


>gi|121594999|ref|YP_986895.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
 gi|241764008|ref|ZP_04762048.1| flagellar hook-basal body complex subunit FliE [Acidovorax
           delafieldii 2AN]
 gi|120607079|gb|ABM42819.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
 gi|241366682|gb|EER61147.1| flagellar hook-basal body complex subunit FliE [Acidovorax
           delafieldii 2AN]
          Length = 102

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N   +    +       +  ++        F   ++           ++  +S     G
Sbjct: 1   MNVITNPLGALLPVIPVDKLVSKAPIVQDGGFLDAMKQALATTSQLQSESGRLSREVTFG 60

Query: 69  K--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               S+ E +   +++      ++  R++I+ A ++V  MQ+
Sbjct: 61  NPTVSLEETMLAGVKSNIAFQATLQSRNRIVQAYTDVMNMQV 102


>gi|15594637|ref|NP_212426.1| flagellar hook-basal body protein FliE [Borrelia burgdorferi B31]
 gi|218249375|ref|YP_002374815.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi ZS7]
 gi|224533743|ref|ZP_03674331.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225550100|ref|ZP_03771060.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
 gi|225552100|ref|ZP_03773040.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
 gi|3915690|sp|P52609|FLIE_BORBU RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|1196317|gb|AAB51409.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|1448945|gb|AAB04620.1| flagellar basal body protein [Borrelia burgdorferi]
 gi|2688174|gb|AAC66656.1| flagellar hook-basal body complex protein (fliE) [Borrelia
           burgdorferi B31]
 gi|218164563|gb|ACK74624.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi ZS7]
 gi|224513036|gb|EEF83399.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225369212|gb|EEG98665.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
 gi|225371098|gb|EEH00528.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
 gi|312147976|gb|ADQ30635.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi JD1]
 gi|312149470|gb|ADQ29541.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           burgdorferi N40]
          Length = 111

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V+  A+       + + V  + +A  
Sbjct: 29  SSKSNAKDNDIKTFKDVLINSITDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGVKAYQDIINI 110


>gi|300822294|ref|ZP_07102435.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           119-7]
 gi|300920155|ref|ZP_07136605.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           115-1]
 gi|301327723|ref|ZP_07220928.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           78-1]
 gi|309795957|ref|ZP_07690370.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           145-7]
 gi|300412812|gb|EFJ96122.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           115-1]
 gi|300525177|gb|EFK46246.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           119-7]
 gi|300845723|gb|EFK73483.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           78-1]
 gi|308120407|gb|EFO57669.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           145-7]
 gi|324018869|gb|EGB88088.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           117-3]
          Length = 114

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 11  MSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAARTQA 66

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 67  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 114


>gi|197285488|ref|YP_002151360.1| flagellar hook-basal body complex protein [Proteus mirabilis
           HI4320]
 gi|227355979|ref|ZP_03840371.1| flagellar hook-basal body complex protein [Proteus mirabilis ATCC
           29906]
 gi|194682975|emb|CAR43400.1| flagellar hook-basal body complex protein [Proteus mirabilis
           HI4320]
 gi|227163967|gb|EEI48869.1| flagellar hook-basal body complex protein [Proteus mirabilis ATCC
           29906]
          Length = 110

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I    S +       ++                 F+  L             A N   
Sbjct: 8   MSIPAIESVLDKMQIQTLQASNIAKPQPVQA----GFATQLVQAVGKINETRVNATNKVQ 63

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   G     + + +  + ++  +L + + +R+K+++A  E+  MQ+
Sbjct: 64  AFTLGTPGVELNDVMVDMQKSSISLQMGVQVRNKLVAAYQEIMSMQV 110


>gi|241763656|ref|ZP_04761706.1| flagellar hook-basal body complex subunit FliE [Acidovorax
           delafieldii 2AN]
 gi|241367131|gb|EER61497.1| flagellar hook-basal body complex subunit FliE [Acidovorax
           delafieldii 2AN]
          Length = 103

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 39/99 (39%), Gaps = 2/99 (2%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL--AALQGK 69
             S T  +       + +  +     + FS  L+   +       +A ++          
Sbjct: 5   ISSSTAPLSGTGLARRAAAPQNDGGEVGFSGALKGALQSVSAAQNRATDLQQEVQLENPS 64

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            S+ + +  I +A+     ++ +R++++ A +++  MQ+
Sbjct: 65  VSLEQTMVAIQKAQIGFQATLHVRNRMVQAYTDIMNMQV 103


>gi|225549161|ref|ZP_03770136.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
 gi|225370387|gb|EEG99825.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
          Length = 111

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V+  A+       + + V  + +A  
Sbjct: 29  SSKSNAKDNDIKTFKDVLINSITDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGVKAYQDIINI 110


>gi|167561150|ref|ZP_02354066.1| flagellar hook-basal body complex protein [Burkholderia
           oklahomensis EO147]
          Length = 100

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQ 81
             T      G ++  SF++ ++       GD +KA   + A   G    S+ + +  + +
Sbjct: 14  SPTAALAGSGAATAGSFASAMKASLDKISGDQQKALGEARAFELGAQNVSLNDVMVDMQK 73

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A       + +R+K++SA +E+ +M +
Sbjct: 74  ANIGFQFGLQVRNKLVSAYNEIMQMSV 100


>gi|148554207|ref|YP_001261789.1| flagellar hook-basal body complex subunit FliE [Sphingomonas
           wittichii RW1]
 gi|148499397|gb|ABQ67651.1| flagellar hook-basal body complex subunit FliE [Sphingomonas
           wittichii RW1]
          Length = 121

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRY--DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   I   NS +                       +   +F+  L+           KA 
Sbjct: 12  MRNAILQQNSALQKAAAAPAPNPLTGAGAIGSATAAPDGNFATTLRGALTEVNAMQAKAG 71

Query: 60  NVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ +  +G+T  +   +    QA      ++ +R+K+LSA  ++  M +
Sbjct: 72  AITESYERGETTDIAAVMLQREQASVGFQATLQVRNKLLSAYKDIMSMPV 121


>gi|332533128|ref|ZP_08408997.1| flagellar hook-basal body complex protein FliE [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037410|gb|EGI73864.1| flagellar hook-basal body complex protein FliE [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 110

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+         S     G          +   +S   F  +L D      G  + A  
Sbjct: 1   MKIQNSAVFQEMQSMALEAGRNNQTNTLPTQVQSTSTAQFGDMLSDAINSVHGLQQDAAQ 60

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G    S+ EA+    ++      ++ +R+K++ A  E+  M +
Sbjct: 61  KVTAVEMGDRSVSLAEAMIASQKSSVAFEATVQVRNKLVEAYKEIMNMPV 110


>gi|118589982|ref|ZP_01547386.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
           12614]
 gi|118437479|gb|EAV44116.1| flagellar hook-basal body protein FliE [Stappia aggregata IAM
           12614]
          Length = 110

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSN---EEGGSSPISFSALLQDMAKGAIGDMEKA 58
           MI +I    S             +T ++      G    ISFS  +  ++  AI  +++ 
Sbjct: 1   MINEISALTSSTDGVLKAASTTRYTASTPDLGGTGSVGEISFSDAMAKVSTDAIDKIKQG 60

Query: 59  ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           E  S+A + G+ S+++ V+ +M AE TL  +IA+RDK++SA  E+S+M I
Sbjct: 61  EAASIAGVDGQASVQQVVEAVMAAESTLQTAIAIRDKVVSAYQEISRMSI 110


>gi|221069299|ref|ZP_03545404.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni KF-1]
 gi|220714322|gb|EED69690.1| flagellar hook-basal body complex subunit FliE [Comamonas
           testosteroni KF-1]
          Length = 102

 Score = 59.6 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKT 70
           I   +   +    T+  +         F   LQ+  +        +  +   +       
Sbjct: 5   IPAINPAQLGNQLTKVGSAGTAPVAGGFGQALQNALQSVSSAQNHSSQLQREVQLENPAV 64

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+ + +  + +++     ++ +R++++ A S+V  MQ+
Sbjct: 65  SLEQTMVAMQKSQIGFQATLHVRNRLVQAYSDVMNMQV 102


>gi|146312174|ref|YP_001177248.1| flagellar hook-basal body protein FliE [Enterobacter sp. 638]
 gi|166988341|sp|A4WBW7|FLIE_ENT38 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|145319050|gb|ABP61197.1| flagellar hook-basal body complex subunit FliE [Enterobacter sp.
           638]
          Length = 104

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    IS      M     +N++       ISF+  L             A   + 
Sbjct: 1   MAIQGIEGVISQLQATAMTA---RNTSVADTQPEISFAGQLHAALDRISDTQNAARTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++ + +  + ++  +L + I +R+K+++A  E+  MQ+
Sbjct: 58  KFTLGEPGVALNDVMTDLQKSSVSLQMGIQVRNKLVTAYQEMMSMQV 104


>gi|83944176|ref|ZP_00956632.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
 gi|83845043|gb|EAP82924.1| flagellar basal body protein [Sulfitobacter sp. EE-36]
          Length = 105

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 47/91 (51%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
                        +  G +P  F+ ++ D A  A+  + + + +++  L G+ S++E V 
Sbjct: 15  AYAKTVQGETRGAKPAGPAPKDFAQMVGDAASQAVDSVREGDQMAIKGLTGQASLQEVVQ 74

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             M  E+T+ +S+ALRDK++ A  EV +M +
Sbjct: 75  ATMAMEQTVQVSVALRDKLVEAYQEVMRMPV 105


>gi|271500087|ref|YP_003333112.1| flagellar hook-basal body complex subunit FliE [Dickeya dadantii
           Ech586]
 gi|270343642|gb|ACZ76407.1| flagellar hook-basal body complex subunit FliE [Dickeya dadantii
           Ech586]
          Length = 104

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG ++ +        +     +S     +S   F++ L+   +       +A+    
Sbjct: 1   MSIQGIDAVLQQMQVTATKAAGGLDS---TAASQSGFASELKAAIEKINETRTQAQAQGE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK   ++ + +    +A   L + + +R+K++SA  EV  M I
Sbjct: 58  AFTLGKPGVALNDVMIDNQKASIALQMGVQVRNKLVSAYQEVMNMTI 104


>gi|304398854|ref|ZP_07380724.1| flagellar hook-basal body complex subunit FliE [Pantoea sp. aB]
 gi|304353558|gb|EFM17935.1| flagellar hook-basal body complex subunit FliE [Pantoea sp. aB]
          Length = 103

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ  +  +       ++     +       + I F A ++            A   + 
Sbjct: 1   MSIQAIDGVLQQLQATSLQASNRSS----EAPNQIDFGATMKAALDKISETQTTARTQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   ++ + +  + ++  ++ + I +R+K++SA SE+  MQ+
Sbjct: 57  DFEMGKPGIALNDVMVDLQKSSISMQMGIQVRNKLVSAYSEIMNMQV 103


>gi|242238980|ref|YP_002987161.1| flagellar hook-basal body complex subunit FliE [Dickeya dadantii
           Ech703]
 gi|242131037|gb|ACS85339.1| flagellar hook-basal body complex subunit FliE [Dickeya dadantii
           Ech703]
          Length = 111

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 47/111 (42%), Gaps = 6/111 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDF----TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
             +QG  S +    ++  +       + + +    ++ + F+  ++          E A+
Sbjct: 1   MSVQGIESVLHQLQSVATQAASTNLSSTSVDTNEVAAGVGFAQEMKSALDKISQQQETAK 60

Query: 60  NVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +     G+   ++ + +  + +A  +L + + +R+K++SA  E+  M +
Sbjct: 61  TQAQQYELGEKGIALNDVMVDLQKASLSLQMGVQVRNKLVSAYQEIMNMSV 111


>gi|261340402|ref|ZP_05968260.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317494|gb|EFC56432.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cancerogenus ATCC 35316]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    +S      +     ++ N       ISF+  L             A   + 
Sbjct: 1   MAIQGIEGVLSQLQATAVSA---RSQNVAEQQPGISFAGQLHAALDRISETQTAARTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++ + +  + +A  +L + I +R+K++SA  +V  MQ+
Sbjct: 58  KFSLGEPGVALNDVMTDLQKASVSLQMGIQVRNKLISAYQDVMSMQV 104


>gi|315127320|ref|YP_004069323.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas sp.
           SM9913]
 gi|315015834|gb|ADT69172.1| flagellar biosynthesis; basal-body component [Pseudoalteromonas sp.
           SM9913]
          Length = 96

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAV 76
                       +   +S   F  +L +         +       A   G    S+ EA+
Sbjct: 5   ATRSNQVNNLPTQVQSTSTAQFGDMLSNALNTVHELQQDTGQKVKAVENGDRSVSLAEAM 64

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               ++      ++ +R+K++ +  E+  M +
Sbjct: 65  IASQKSSVAFEATVQVRNKLVESYKEIMNMPV 96


>gi|332531122|ref|ZP_08407036.1| flagellar hook-basal body complex subunit FliE [Hylemonella
           gracilis ATCC 19624]
 gi|332039407|gb|EGI75819.1| flagellar hook-basal body complex subunit FliE [Hylemonella
           gracilis ATCC 19624]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 8/91 (8%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVD 77
                  +    +    P  F+   +   +        +  +           S+ E + 
Sbjct: 14  TQPDTARKAVMPDESHGPQGFTDEFKAALRAVSKSQNYSGEMQRQVQMENPKVSLEETMV 73

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + +A+     ++ +R++++ A +++  M +
Sbjct: 74  AMQKAQIGFQATLHVRNRMVQAYTDIMNMSV 104


>gi|311279121|ref|YP_003941352.1| flagellar hook-basal body complex subunit FliE [Enterobacter
           cloacae SCF1]
 gi|308748316|gb|ADO48068.1| flagellar hook-basal body complex subunit FliE [Enterobacter
           cloacae SCF1]
          Length = 103

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG    ++              + +      ISF+  L             A   + 
Sbjct: 1   MAIQGIEGVLTQMQAAANVA----RNQQVDEQPGISFAGQLNAALDRISDTQNSARAQAE 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G+   ++ + +  + ++  +L L I +R+K+++A  E+  MQ+
Sbjct: 57  KFAIGEPGVALNDVMTDLQKSSVSLQLGIQVRNKLVTAYQEMMGMQV 103


>gi|254473498|ref|ZP_05086895.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
           JE062]
 gi|211957614|gb|EEA92817.1| flagellar hook-basal body complex protein FliE [Pseudovibrio sp.
           JE062]
          Length = 118

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
            G N   S   T        Q++    G    SF+  + D+ +   GD++ AE  S+AA+
Sbjct: 18  SGVNDVSSTARTRQYLVGAPQDTRATQGVQG-SFADTMADVVRETAGDLKTAEATSVAAV 76

Query: 67  QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +G+ S ++ V+ +M+AE +L  ++A+RDK++ A  E S+M I
Sbjct: 77  RGEVSAQKVVEAVMKAELSLKSAVAVRDKVVEAYQEFSRMSI 118


>gi|85716544|ref|ZP_01047514.1| flagellar basal body protein [Nitrobacter sp. Nb-311A]
 gi|85696545|gb|EAQ34433.1| flagellar basal body protein [Nitrobacter sp. Nb-311A]
          Length = 86

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 41/73 (56%)

Query: 36  SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDK 95
              +FSA+L+D+  G +    K++  ++A   GK ++ + V  +   +  ++  +++RD+
Sbjct: 14  DGPAFSAVLKDVLGGVMEAGRKSDAQTVAMASGKANLMDVVTAVADTDVAVSTLVSVRDR 73

Query: 96  ILSAVSEVSKMQI 108
           ++ +  ++ +M I
Sbjct: 74  VIQSYEDIMRMPI 86


>gi|307546948|ref|YP_003899427.1| flagellar hook-basal body complex protein FliE [Halomonas elongata
           DSM 2581]
 gi|307218972|emb|CBV44242.1| K02408 flagellar hook-basal body complex protein FliE [Halomonas
           elongata DSM 2581]
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNE--EGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
               S ++   ++  +        +          F+  LQ   +      ++A   + A
Sbjct: 4   SALESALTQMQSLASQAAGQPARGQRLSTAVGEGGFADELQASIERINTLKQEAAEKTRA 63

Query: 65  ALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              G+    + + +  + +A     +   +R ++++A  +V  MQ+
Sbjct: 64  FQAGEPGVELDDVMVDVQKASVAFEMGKQVRSRLVTAYKDVMNMQV 109


>gi|89068703|ref|ZP_01156089.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
 gi|89045666|gb|EAR51728.1| flagellar biosynthesis protein [Oceanicola granulosus HTCC2516]
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 49/104 (47%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            I  TN+      +            E   + P SFS+ +Q  A  A+G + +A+    A
Sbjct: 6   SIVSTNAVRGAYRSAQTLNGERPPLAEGQAAKPDSFSSFVQTAATDAVGTVREADAAMKA 65

Query: 65  ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + G+   +  V+  +  E T+ +++++RDK++ A  +V +M I
Sbjct: 66  GVTGEMDTQAVVEATLALESTVKVAVSVRDKVVEAYQQVMQMPI 109


>gi|323698501|ref|ZP_08110413.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio sp.
           ND132]
 gi|323458433|gb|EGB14298.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           desulfuricans ND132]
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI-SFSALLQDMAKGAIGDMEKAEN 60
           M+ +    N++ +  D      D T + +      P+ SFS  L+          E  E 
Sbjct: 1   MVVKSVALNAYQNAMDIRRRTVDSTVSQSLRKPQEPVRSFSDTLKSSLVKVNDLQETKET 60

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
           +      GKT ++ E +  + +A   + ++ A+R KI++A  E+ +M
Sbjct: 61  MIEEFASGKTQNVHELMISMQKAGMAMQMTGAVRSKIMNAYKEIMQM 107


>gi|92116947|ref|YP_576676.1| flagellar hook-basal body protein FliE [Nitrobacter hamburgensis
           X14]
 gi|91799841|gb|ABE62216.1| flagellar hook-basal body complex protein (FliE) [Nitrobacter
           hamburgensis X14]
          Length = 103

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 45/96 (46%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
            +   ++    D    + +       SFS++L+D     +    K++  ++A   GK ++
Sbjct: 8   ANAYASLAKMMDSGTAAGKASEGGGPSFSSVLKDALGSVMEAGRKSDAQTVAMASGKANV 67

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + V  +   +  ++  +++RD+++ +  ++ +M I
Sbjct: 68  MDVVTAVADTDVAVSTLVSVRDRVIQSYEDIMRMPI 103


>gi|159045789|ref|YP_001534583.1| flagellar hook-basal body protein FliE [Dinoroseobacter shibae DFL
           12]
 gi|157913549|gb|ABV94982.1| flagellar hook-basal body complex protein FliE [Dinoroseobacter
           shibae DFL 12]
          Length = 92

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           +   A+     ++  E V+ AA+ G       V+ + Q E  +  ++ +R+K++ A  E+
Sbjct: 28  IAGAARSFAETLQNGEAVTQAAMTGGADPHALVEALAQTELAVETAVTVRNKVVEAYQEI 87

Query: 104 SKMQI 108
            +M +
Sbjct: 88  LRMPV 92


>gi|323174687|gb|EFZ60307.1| flagellar hook-basal body complex protein [Escherichia coli LT-68]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K++ A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVEAYQEVMSMQV 104


>gi|300899192|ref|ZP_07117469.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           198-1]
 gi|300357206|gb|EFJ73076.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           198-1]
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS   T  M     ++  +      ISF+  L             A  
Sbjct: 4   MKMSAIQGIEGVISQLQTTAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAART 59

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 60  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 109


>gi|56695103|ref|YP_165450.1| flagellar hook-basal body protein FliE [Ruegeria pomeroyi DSS-3]
 gi|56676840|gb|AAV93506.1| flagellar hook-basal body complex protein FliE, putative [Ruegeria
           pomeroyi DSS-3]
          Length = 96

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 39/90 (43%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
              +   +     +      S +  L+   +     ++ +E ++ +A+ GK      V  
Sbjct: 7   SAAQAYASARPATQADPKDDSATQGLRGTFQDFAATLQHSEELAQSAMIGKADPHALVQA 66

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + Q+E  +  ++ +R+K++ A  E+ +M +
Sbjct: 67  LAQSELAVETAVTVRNKVVEAYQEILRMPV 96


>gi|107023994|ref|YP_622321.1| flagellar hook-basal body complex protein (FliE) [Burkholderia
           cenocepacia AU 1054]
 gi|105894183|gb|ABF77348.1| flagellar hook-basal body complex protein (FliE) [Burkholderia
           cenocepacia AU 1054]
          Length = 119

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE-----GGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +    ++  +      S        G ++  +F++ ++       GD +
Sbjct: 6   MTANVSGIGSVLQQMQSMAAQASGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 65

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G    S+ + +  + +A   L   + +R+K++SA +++ +M +
Sbjct: 66  HALGEAKAFEVGAPNISLNDVMVDMQKANIGLQFGLQVRNKLVSAYNDIMQMSV 119


>gi|163738063|ref|ZP_02145479.1| flagellar hook-basal body complex protein FliE, putative
           [Phaeobacter gallaeciensis BS107]
 gi|163742541|ref|ZP_02149927.1| flagellar hook-basal body complex protein FliE, putative
           [Phaeobacter gallaeciensis 2.10]
 gi|161384126|gb|EDQ08509.1| flagellar hook-basal body complex protein FliE, putative
           [Phaeobacter gallaeciensis 2.10]
 gi|161388679|gb|EDQ13032.1| flagellar hook-basal body complex protein FliE, putative
           [Phaeobacter gallaeciensis BS107]
          Length = 98

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 40/96 (41%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I               +  +    P S  A ++   +   G ++++E VS+ A+ G    
Sbjct: 3   IRSLSATTGYAAARPATKVDPEHMPSSAEAKIKASFEEFAGTLQQSEQVSVTAMTGNGDP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|324114221|gb|EGC08194.1| flagellar hook-basal body complex protein FliE [Escherichia
           fergusonii B253]
          Length = 106

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M     +   +      ISF+  L             A  
Sbjct: 1   MNMSAIQGIQGVISQLQATAMSARAQEPMPQPT----ISFAGQLHAALDRISDTQNTARV 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|91795007|ref|YP_564658.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
 gi|91717009|gb|ABE56935.1| flagellar hook-basal body complex protein (FliE) [Shewanella
           denitrificans OS217]
          Length = 112

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
                 ++    +       + +  +   +  SFS L++            + N+  A  
Sbjct: 10  TSLMETLNLQREMAKGAISIKPNFADNEMAIGSFSDLMKQKVASVNEAQNHSSNLMKAVD 69

Query: 67  QGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            GK+  +  A+    +A  + +  I +R++++ A  +V KM +
Sbjct: 70  SGKSDDLVGAMVASQKASLSFSAMIQIRNRLVQAFDDVIKMPV 112


>gi|317492407|ref|ZP_07950836.1| flagellar hook-basal body complex protein FliE [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316919746|gb|EFV41076.1| flagellar hook-basal body complex protein FliE [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I G    +       +      N ++   +   +F+A L+            A   + 
Sbjct: 1   MAIVGIEGVLQQLQATAVSAA---NRSQNSEAPQGAFAAELKAAVNRISETQNNARVQAQ 57

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G    ++ + +  + ++  +L + I +R+++++A  ++  MQ+
Sbjct: 58  NFEMGVPGVALNDVMVDLQKSGISLQMGIQVRNRLVAAYQDIMNMQV 104


>gi|330986488|gb|EGH84591.1| flagellar hook-basal body protein FliE [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M + ++     +             ++ +    +   SF+ +L           + +  +
Sbjct: 1   MSQGVEFNRLMLDMRAMQMDAMSAPKSVSGAQEAGASSFADMLGQAVNKVAQTQQASSQL 60

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   GK    + + +    +A  +      +R+K++ A  ++ +M +
Sbjct: 61  ANAFEIGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109


>gi|283785707|ref|YP_003365572.1| flagellar hook-basal body complex protein FliE [Citrobacter
           rodentium ICC168]
 gi|282949161|emb|CBG88769.1| flagellar hook-basal body complex protein FliE [Citrobacter
           rodentium ICC168]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     +   +      +SF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMGARAQETLPQPT----VSFAGQLHAALDRISDRQTDARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|254466886|ref|ZP_05080297.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
           bacterium Y4I]
 gi|206687794|gb|EDZ48276.1| flagellar hook-basal body complex protein FliE [Rhodobacterales
           bacterium Y4I]
          Length = 98

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 36/96 (37%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I               +  +         A L+   +     ++ +E VS+ A+  +   
Sbjct: 3   IRSLSAASGYAAARPATKADPNHESTGAGAQLKQSFEDFTATLQNSEQVSVQAMTSQADP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HALVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|83955123|ref|ZP_00963779.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
 gi|83840452|gb|EAP79625.1| flagellar basal body protein [Sulfitobacter sp. NAS-14.1]
          Length = 105

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 47/91 (51%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
                        +  G +P  F+ ++ D A  A+  + + + +++  L G+ S++E V 
Sbjct: 15  AYAKTVQGETRGAKPAGPAPKDFAQMVGDAASQAVESVREGDQMAIKGLTGQASLQEVVQ 74

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             M  E+T+ +S+ALRDK++ A  EV +M +
Sbjct: 75  ATMAMEQTVQVSVALRDKLVEAYQEVMRMPV 105


>gi|171321707|ref|ZP_02910624.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria MEX-5]
 gi|171093008|gb|EDT38240.1| flagellar hook-basal body complex subunit FliE [Burkholderia
           ambifaria MEX-5]
          Length = 114

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGM-----RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           M   + G  S +     +           T      G ++  +F++ ++       GD +
Sbjct: 1   MTANVSGIGSVLQQMQAMAAQAGGGVASPTAALAGSGAATAGTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  HALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 114


>gi|85710178|ref|ZP_01041243.1| flagellar protein [Erythrobacter sp. NAP1]
 gi|85688888|gb|EAQ28892.1| flagellar protein [Erythrobacter sp. NAP1]
          Length = 121

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
            +  ++ +      T     +      SF+  L    +       K+  +  A  +G+  
Sbjct: 24  VLGRSEALQQVRAATGTQPIDAAQPASSFANALNGALQEVSAVQAKSGAMQAAYERGEVT 83

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
            + + +    +A      ++ +R+K+LSA  ++ +M
Sbjct: 84  DIAKVMLARQEAGVAFEATLQVRNKLLSAYQDIMRM 119


>gi|221207552|ref|ZP_03580560.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD2]
 gi|221172398|gb|EEE04837.1| flagellar hook-basal body complex protein FliE [Burkholderia
           multivorans CGD2]
          Length = 112

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGT--NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           M +  I               G            G ++  +F++ ++       GD ++A
Sbjct: 1   MNVSGIGSVLQQMQAMAAQASGGVASPAAALAGSGAATAGTFASAMKASLDKISGDQQRA 60

Query: 59  ENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + A   G  +  + + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  LGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 112


>gi|333003293|gb|EGK22839.1| flagellar hook-basal body complex protein [Shigella flexneri K-218]
          Length = 104

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSACAQESLPQPT----ISFAGQLHAALDRISDTQTVARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|300904826|ref|ZP_07122652.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           84-1]
 gi|301305279|ref|ZP_07211376.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           124-1]
 gi|331642558|ref|ZP_08343693.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H736]
 gi|300403253|gb|EFJ86791.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           84-1]
 gi|300839485|gb|EFK67245.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           124-1]
 gi|315257232|gb|EFU37200.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           85-1]
 gi|331039356|gb|EGI11576.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H736]
          Length = 106

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS   T  M     ++  +      ISF+  L             A  
Sbjct: 1   MKMSAIQGIEGVISQLQTTAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAART 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|85706170|ref|ZP_01037265.1| flagellar hook-basal body complex protein FliE, putative
           [Roseovarius sp. 217]
 gi|85669334|gb|EAQ24200.1| flagellar hook-basal body complex protein FliE, putative
           [Roseovarius sp. 217]
          Length = 96

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 39/90 (43%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
              +      +  E      +  A  Q++AK     +++ E V+ +A+ GK      V  
Sbjct: 7   TAAQKYTATRTATEPALGQGTGGAAFQNIAKDFAATLKEGEEVAKSAMIGKADPHSLVQA 66

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + Q E  +   I +RD+++ A  E+ +M +
Sbjct: 67  LAQTELAVEAVITVRDRVVEAYQEILRMPV 96


>gi|114799787|ref|YP_759002.1| flagellar hook-basal body complex protein FliE [Hyphomonas
           neptunium ATCC 15444]
 gi|114739961|gb|ABI78086.1| flagellar hook-basal body complex protein FliE [Hyphomonas
           neptunium ATCC 15444]
          Length = 99

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 37/90 (41%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
             +      ++ +  G +P +  +   +        M++AE  ++            V+ 
Sbjct: 10  TALSTPRPTDTAKPAGDAPEAAGSKFAETISDFRTTMQEAEQTAMQTAVSGADPHAMVEA 69

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  AE  L+  + +RDK++ A  E+ +M +
Sbjct: 70  LTNAELMLDAVVTIRDKVVEAYQELLRMPV 99


>gi|288942637|ref|YP_003444877.1| flagellar hook-basal body complex subunit FliE [Allochromatium
           vinosum DSM 180]
 gi|288898009|gb|ADC63845.1| flagellar hook-basal body complex subunit FliE [Allochromatium
           vinosum DSM 180]
          Length = 111

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 44/111 (39%), Gaps = 3/111 (2%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAE 59
           M   QIQ   + +      G   +    +  +  +     F+  L+D  +      +++ 
Sbjct: 1   MSEMQIQNVLAQMRALAQSGRVENAAPVAESQSTAGQDEDFATKLRDAIRDVNEIQQESS 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++      G    S+ + +  + ++      +  +R+++LSA  EV  MQ+
Sbjct: 61  SMQTRFELGDNNVSLPQVMVAMNRSSIAFEATNQVRNRLLSAYQEVMSMQV 111


>gi|251789189|ref|YP_003003910.1| flagellar hook-basal body complex subunit FliE [Dickeya zeae
           Ech1591]
 gi|247537810|gb|ACT06431.1| flagellar hook-basal body complex subunit FliE [Dickeya zeae
           Ech1591]
          Length = 104

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG ++ +        +     +SN    +S   F++ L+   +       +A+  + 
Sbjct: 1   MSIQGIDAVLQQMQVTATKAAGGLDSN---VASQSGFASELKAALEKINETRVQAQTQAE 57

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK   ++ + +    +A   L + + +R+K++SA  EV  M +
Sbjct: 58  AFTLGKPGVALNDVMVDNQKASIALQMGVQVRNKLVSAYQEVMNMTV 104


>gi|13472575|ref|NP_104142.1| flagellar hook-basal body protein FliE [Mesorhizobium loti
           MAFF303099]
 gi|38503149|sp|Q98HD8|FLIE_RHILO RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|14023321|dbj|BAB49928.1| flagellar hook-basal body protein; FleE [Mesorhizobium loti
           MAFF303099]
          Length = 107

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M++  I   N                  +    G+   SF+  +   A   +  ++ AE 
Sbjct: 1   MIVNGIGALN-LKPGLGDTATDLIQGGVAPATSGNLGTSFAEAVSQAASKTVNTLQNAEQ 59

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           VSL AL+G    R+ VD +M A++ L  ++A+RDK++SA  EVS+M I
Sbjct: 60  VSLQALKGDADTRQVVDAVMSAQQALQTAVAIRDKVVSAYLEVSRMGI 107


>gi|302670717|ref|YP_003830677.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
           proteoclasticus B316]
 gi|302395190|gb|ADL34095.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
           proteoclasticus B316]
          Length = 112

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD---MEK 57
           M    I    +  S       + +    +         SFS++     +        +  
Sbjct: 1   MASLDISQLRNVSSDVIRNAEKVNSRVYNVLGPQDDNNSFSSIFGRAMENINTTNAYLSD 60

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AEN  +    G+T+   +    + +A+  L  +IA+RD+ LSA  E+++MQI
Sbjct: 61  AENEEIKWALGETNNTHDLSIALQKAQTALQYTIAVRDRALSAYREITQMQI 112


>gi|239815255|ref|YP_002944165.1| flagellar hook-basal body complex protein FliE [Variovorax
           paradoxus S110]
 gi|239801832|gb|ACS18899.1| flagellar hook-basal body complex protein FliE [Variovorax
           paradoxus S110]
          Length = 121

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 9/115 (7%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNE--------EGGSSPISFSALLQDMAKGAIGD 54
           IE +   ++                             G S+  SF  ++ D        
Sbjct: 7   IEALSSLSAQAQSLVAAAQSQSVAGAVPGMLPGASSPTGASAAGSFGQMVSDGISQVNSK 66

Query: 55  MEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   +        G   ++ + + ++ ++  +  + + +R ++L A  ++ KM I
Sbjct: 67  LISNQVDLQKLALGDAQNLHQLMINLEESRVSFQMMMQVRSRLLEAYQDIMKMPI 121


>gi|197104392|ref|YP_002129769.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
           zucineum HLK1]
 gi|196477812|gb|ACG77340.1| flagellar hook-basal body complex protein FliE [Phenylobacterium
           zucineum HLK1]
          Length = 103

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
                           +   F  +L+     AI    +AE    A +QGK  + + V  I
Sbjct: 15  QKTMGLEGAGGVTEPGAGPGFGEILKAAMGDAIQASRQAETQMAAQVQGKAELVDVVTAI 74

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
             AE +L   +A+RD+++SA  E+ +M I
Sbjct: 75  SAAEASLETVLAVRDQVISAYKEILQMPI 103


>gi|16125207|ref|NP_419771.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
           CB15]
 gi|221233943|ref|YP_002516379.1| flagellar hook-basal body protein FliE [Caulobacter crescentus
           NA1000]
 gi|38503159|sp|Q9A9M3|FLIE_CAUCR RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|13422231|gb|AAK22939.1| flagellar hook-basal body complex protein FliE [Caulobacter
           crescentus CB15]
 gi|220963115|gb|ACL94471.1| flagellar hook-basal body complex protein FliE [Caulobacter
           crescentus NA1000]
          Length = 103

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 41/91 (45%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
             G     +  S        + F  LL+    GA    + AE+   A + GK  + + V 
Sbjct: 13  NSGAMSVGSIGSIGGSQDKGVDFGDLLKSAMDGATKASKVAEHKIAAQVAGKAELVDVVT 72

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            I  AE +L   +++RD+++SA  E+ +M I
Sbjct: 73  AISSAEASLETVMSIRDQVISAYQEIMRMPI 103


>gi|209884537|ref|YP_002288394.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
           carboxidovorans OM5]
 gi|209872733|gb|ACI92529.1| flagellar hook-basal body complex protein (FliE) [Oligotropha
           carboxidovorans OM5]
          Length = 108

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 46/108 (42%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M    +                           GS+  SF+ALL++   G +    K++ 
Sbjct: 1   MATPSVAANAYASLSRIMESAAGAGGAGKTAAAGSTGPSFNALLKEAMNGVLETGHKSDA 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++A   GK ++ + V  + + +  ++  +++RDK++ A  ++ +M I
Sbjct: 61  QAVAMASGKANVMDVVTAVAETDVAVSTLVSVRDKVIQAYEDIMRMPI 108


>gi|221309495|ref|ZP_03591342.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313820|ref|ZP_03595625.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318744|ref|ZP_03600038.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323015|ref|ZP_03604309.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|296330834|ref|ZP_06873309.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674352|ref|YP_003866024.1| flagellar basal body protein [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|321315386|ref|YP_004207673.1| flagellar hook-basal body protein FliE [Bacillus subtilis BSn5]
 gi|296151839|gb|EFG92713.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412596|gb|ADM37715.1| flagellar basal body protein [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|320021660|gb|ADV96646.1| flagellar hook-basal body protein FliE [Bacillus subtilis BSn5]
          Length = 108

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSF-ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           +  I   + F + +T       +   NS +   S+  SFS LL++           ++N+
Sbjct: 1   MNVINAISPFQVQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNESQVASDNM 60

Query: 62  SLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G   ++ E +    +A  +L  +   R+K + A  E+ +MQ+
Sbjct: 61  TNALAAGKDVNLDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 108


>gi|89072279|ref|ZP_01158858.1| putative flagellar hook-basal body complex protein [Photobacterium
           sp. SKA34]
 gi|89051811|gb|EAR57263.1| putative flagellar hook-basal body complex protein [Photobacterium
           sp. SKA34]
          Length = 123

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 48/109 (44%), Gaps = 1/109 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M++++Q           +       + +N +   SP+SFS  +  +        + A +
Sbjct: 15  LMLDKMQQMQQRTQADFIVKPNLTQVEATNTQFAVSPLSFSQAMTGVLNTVNQHQKIASD 74

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   GK+  +  A+    +A  + +  + +R+K++++  +V KM +
Sbjct: 75  KVTAVELGKSDDLVGAMVASQKASLSFSALMQVRNKVVASFEDVMKMPV 123


>gi|315121848|ref|YP_004062337.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495250|gb|ADR51849.1| flagellar hook-basal body protein FliE [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 107

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 67/107 (62%), Positives = 83/107 (77%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MIEQIQ T  FI HT T+ M+ D  Q++ E   +S + FS+LLQDM + AIG ++KAE+ 
Sbjct: 1   MIEQIQRTEGFIPHTSTVEMQADSVQSAKEVSDASSVDFSSLLQDMVQEAIGKIKKAEDF 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           SL ALQGKTSMREA+D IMQAERTL +SIALRDKI+S+  E+SKMQI
Sbjct: 61  SLTALQGKTSMREAIDCIMQAERTLQVSIALRDKIVSSALEISKMQI 107


>gi|300818644|ref|ZP_07098852.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           107-1]
 gi|301644605|ref|ZP_07244594.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           146-1]
 gi|300528816|gb|EFK49878.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           107-1]
 gi|301077080|gb|EFK91886.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           146-1]
          Length = 106

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M      +  +      ISF+  L             A  
Sbjct: 1   MKMSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAART 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|220913733|ref|YP_002489042.1| flagellar hook-basal body complex subunit FliE [Arthrobacter
           chlorophenolicus A6]
 gi|219860611|gb|ACL40953.1| flagellar hook-basal body complex subunit FliE [Arthrobacter
           chlorophenolicus A6]
          Length = 112

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 1/104 (0%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
            I G  +       +          +  G +S   F+  L             +  ++++
Sbjct: 8   PISGLGALGRAVQPVQGTGYSDGAVSAAGAASGGGFATALTGALDNLQQLQSTSRELAVS 67

Query: 65  ALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           A+ G    +  A     +A+ TL L  A+R+K + A +E+ +MQ
Sbjct: 68  AVTGNLDDIHAATLASSRAQITLELVAAVRNKGVDAFNEIMRMQ 111


>gi|331647531|ref|ZP_08348623.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M605]
 gi|331043255|gb|EGI15393.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M605]
          Length = 106

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M +  IQG    IS      M     ++  +      ISF+  L             A  
Sbjct: 1   MKMSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAART 56

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  QAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 106


>gi|218549261|ref|YP_002383052.1| flagellar hook-basal body protein FliE [Escherichia fergusonii ATCC
           35469]
 gi|226704232|sp|B7LTC6|FLIE_ESCF3 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|218356802|emb|CAQ89430.1| flagellar basal-body component [Escherichia fergusonii ATCC 35469]
          Length = 104

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     +   +      ISF+  L             A   +
Sbjct: 1   MSAIQGIQGVISQLQATAMSARAQEPMPQPT----ISFAGQLHAALDRISDTQNTARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|114762161|ref|ZP_01441629.1| flagellar hook-basal body complex protein FliE, putative
           [Pelagibaca bermudensis HTCC2601]
 gi|114545185|gb|EAU48188.1| flagellar hook-basal body complex protein FliE, putative
           [Roseovarius sp. HTCC2601]
          Length = 96

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 40/89 (44%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
             +    Q    E   +  S +A L+  A+     + +AE  + AA+ G       V  +
Sbjct: 8   AAQKYAAQRPATEPQPNADSAAARLRGAAEDFATTLNEAETTATAAMTGDADPHALVQAL 67

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            Q+E  +   +ALR+K++ A  E+ +M +
Sbjct: 68  AQSELAVETVVALRNKVVEAYQEILRMPV 96


>gi|319764516|ref|YP_004128453.1| flagellar hook-basal body complex subunit flie [Alicycliphilus
           denitrificans BC]
 gi|330826732|ref|YP_004390035.1| flagellar hook-basal body complex subunit FliE [Alicycliphilus
           denitrificans K601]
 gi|317119077|gb|ADV01566.1| flagellar hook-basal body complex subunit FliE [Alicycliphilus
           denitrificans BC]
 gi|329312104|gb|AEB86519.1| flagellar hook-basal body complex subunit FliE [Alicycliphilus
           denitrificans K601]
          Length = 103

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 45/99 (45%), Gaps = 2/99 (2%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGK 69
             S+   +       + +  + G+  + FS+  ++  +      ++A ++   +     K
Sbjct: 5   IASNQFPLTGTQVARRAAAPQEGTQEVGFSSAFKNALQSVSAAQDRASDLQREVQLENPK 64

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            S+ E +  + +A+     ++ +R++++ A +++  MQ+
Sbjct: 65  VSIEETMVAMQKAQIGFQATLHVRNRMVQAYTDIMNMQV 103


>gi|260466620|ref|ZP_05812808.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
           opportunistum WSM2075]
 gi|259029626|gb|EEW30914.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
           opportunistum WSM2075]
          Length = 107

 Score = 58.1 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M++  I   N                  +    G+   SF+  L   A   +  M+ AE 
Sbjct: 1   MIVNGIGALN-LKPGLGDTATDLLQGGVAPAAPGNLGTSFAEALSQAASKTVSTMQNAEQ 59

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           VS+ AL+G    R+ VD +M A++ L  ++A+RDK++SA  EVS+M I
Sbjct: 60  VSMQALKGDADTRQVVDAVMSAQQALQTAVAIRDKVVSAYLEVSRMGI 107


>gi|90577380|ref|ZP_01233191.1| putative flagellar hook-basal body complex protein [Vibrio angustum
           S14]
 gi|90440466|gb|EAS65646.1| putative flagellar hook-basal body complex protein [Vibrio angustum
           S14]
          Length = 123

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 48/109 (44%), Gaps = 1/109 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M++++Q           +       + +N +   SP+SFS  +  +        + A +
Sbjct: 15  LMLDKMQQMQQRTQADFIVKPNLMQVEATNTQFAPSPLSFSQAMTGVLNTVNQHQKIASD 74

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   GK+  +  A+    +A  + +  + +R+K++++  +V KM +
Sbjct: 75  KVTAVELGKSDDLVGAMVASQKASLSFSALMQVRNKVVASFEDVMKMPV 123


>gi|149178730|ref|ZP_01857313.1| probable flagellar hook-basal body complex protein FliE
           [Planctomyces maris DSM 8797]
 gi|148842428|gb|EDL56808.1| probable flagellar hook-basal body complex protein FliE
           [Planctomyces maris DSM 8797]
          Length = 104

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   I    + +      G+     +++     +   SF  ++      A     ++E  
Sbjct: 1   MTSSISHIGNSLLP----GLSPAGLKDAGAGTPAGAPSFQNMMLQSLDSANQLQLQSEQA 56

Query: 62  SLAALQGKTSMR-EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             A L G+   + E    I +A+  L + + +R+K+L A +E+ KMQ+
Sbjct: 57  IQAGLLGEDITQAEVFSSIKKADLALRMMVQMRNKLLEAYNEIQKMQM 104


>gi|16078683|ref|NP_389502.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|120321|sp|P24502|FLIE_BACSU RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|142917|gb|AAA22443.1| fliE [Bacillus subtilis]
 gi|2633992|emb|CAB13493.1| flagellar basal body protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291484171|dbj|BAI85246.1| flagellar hook-basal body protein FliE [Bacillus subtilis subsp.
           natto BEST195]
          Length = 106

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 3/108 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI  I      + +T       +   NS +   S+  SFS LL++           ++N+
Sbjct: 1   MINAISPF--QVQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNESQVASDNM 58

Query: 62  SLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G   ++ E +    +A  +L  +   R+K + A  E+ +MQ+
Sbjct: 59  TNALAAGKDVNLDEVMIAAQKASISLTAATEFRNKAVEAYQEIMRMQM 106


>gi|222147570|ref|YP_002548527.1| flagellar hook-basal body protein FliE [Agrobacterium vitis S4]
 gi|221734558|gb|ACM35521.1| flagellar hook-basal body complex protein [Agrobacterium vitis S4]
          Length = 124

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 57/102 (55%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
             T S          +      +   G ++ +SFS ++  +   A+ +++ AE+ SL  +
Sbjct: 23  TSTASLGGTHSLFSTQTGVAAQNATPGTATGMSFSDVVGGVMNDAMQNLKTAESNSLDGM 82

Query: 67  QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            GK S RE VD +M A+++L  +IALRDK++SA  +++KMQI
Sbjct: 83  LGKVSTREVVDSVMSAQKSLQTAIALRDKLVSAFLDITKMQI 124


>gi|121593871|ref|YP_985767.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
 gi|120605951|gb|ABM41691.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
          Length = 102

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA--AL 66
            N   +  + +       +  ++        F   ++           ++  +S      
Sbjct: 1   MNVTTNPLEALRPVTQAGKLVSKTPSVQDGGFLDAMKQALSTTSKLQAESGRLSREVTLE 60

Query: 67  QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + E +   +++      ++  R++I+ A ++V  MQ+
Sbjct: 61  NPTVGLEETMLAGVKSNIAFQATLQSRNRIVQAYTDVMNMQV 102


>gi|325526321|gb|EGD03929.1| flagellar hook-basal body complex protein FliE [Burkholderia sp.
           TJI49]
          Length = 82

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS--MREAVDHIMQAERTLN 87
              G ++  +F++ ++       GD + A   + A   G  +  + + +  + +A     
Sbjct: 2   AGSGAATAGTFASAMKASLDKISGDQQHALGEAQAFEVGAANVSLNDVMVDMQKANIGFQ 61

Query: 88  LSIALRDKILSAVSEVSKMQI 108
             + +R+K++SA +++ +M +
Sbjct: 62  FGLQVRNKLVSAYNDIMQMSV 82


>gi|323186813|gb|EFZ72133.1| flagellar hook-basal body complex protein [Escherichia coli
           RN587/1]
          Length = 104

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARVQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|296135690|ref|YP_003642932.1| flagellar hook-basal body complex subunit FliE [Thiomonas
           intermedia K12]
 gi|295795812|gb|ADG30602.1| flagellar hook-basal body complex subunit FliE [Thiomonas
           intermedia K12]
          Length = 117

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 41/107 (38%), Gaps = 2/107 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q++   +         +  +          S    F+  L+    G  G+++ A  + 
Sbjct: 10  LAQMRSLTAQAQARPAGAVDGNAAAALGATAASQQSDFATTLKSAIDGVSGELQHANALQ 69

Query: 63  LAAL--QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
              +   G  S+ + +    +A  +    + +R+K++SA  ++  +Q
Sbjct: 70  QQFVSGTGDVSLSDVMLASQKASLSFQAVLQVRNKLVSAYQDIMNIQ 116


>gi|316932835|ref|YP_004107817.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris DX-1]
 gi|315600549|gb|ADU43084.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris DX-1]
          Length = 102

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSP--ISFSALLQDMAKGAIGDMEKAENVSLAAL 66
             S IS  +        ++ +  + G+     SF  L++      +    +++  S+A  
Sbjct: 1   MASPISAANAYASLARLSKPAGIDKGAEDSVPSFGNLVKQAMGSVLDAGRQSDAQSMAMA 60

Query: 67  QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            GK+++ + V  + + +  ++  +++RD+++ +  E+ +M I
Sbjct: 61  SGKSNVMDVVTAVAETDVAVSTLVSVRDRVIQSYEEIMRMPI 102


>gi|291617847|ref|YP_003520589.1| FliE [Pantoea ananatis LMG 20103]
 gi|291152877|gb|ADD77461.1| FliE [Pantoea ananatis LMG 20103]
 gi|327394263|dbj|BAK11685.1| flagellar hook-basal body complex protein FliE [Pantoea ananatis
           AJ13355]
          Length = 103

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q     +       ++ +   N      +S I F A ++            A   + 
Sbjct: 1   MSVQAIEGVLQQLQMTSLQANNKSN----DVTSHIDFGATMKAALDKISETQTSARTQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   ++ + +  + ++  ++ + I +R+K++SA +++  MQ+
Sbjct: 57  DFEMGKPGIALNDVMVDLQKSSISMQMGIQVRNKLVSAYTDIMNMQV 103


>gi|308187289|ref|YP_003931420.1| lagellar hook-basal body complex protein fliE [Pantoea vagans C9-1]
 gi|308057799|gb|ADO09971.1| Putative lagellar hook-basal body complex protein fliE [Pantoea
           vagans C9-1]
          Length = 103

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ  +  +       ++     +      ++ I F A ++            A   + 
Sbjct: 1   MSIQAIDGVLQQLQATSLQASNRSS----EATNQIDFGATMKAALDKISETQTTARTQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   ++ + +  + ++  ++ + I +R+K++SA SE+  MQ+
Sbjct: 57  DFEMGKPGIALNDVMVDLQKSSISMQMGIQVRNKLVSAYSEIMNMQV 103


>gi|27380923|ref|NP_772452.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
           USDA 110]
 gi|38502985|sp|Q89I27|FLIE1_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 1
 gi|27354089|dbj|BAC51077.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 102

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 44/82 (53%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
             + +   +S  SF++LL+D     +    K++  ++A   GK ++ + V  +   +  +
Sbjct: 21  SGAGKGSEASGQSFASLLKDAVGSVMESGRKSDAQTVAMAAGKANVMDVVTAVADTDVAV 80

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
           +  +++RD+++SA  ++ KM I
Sbjct: 81  STLVSVRDRVISAYEDIMKMPI 102


>gi|30063378|ref|NP_837549.1| flagellar hook-basal body protein FliE [Shigella flexneri 2a str.
           2457T]
 gi|56480004|ref|NP_707823.2| flagellar hook-basal body protein FliE [Shigella flexneri 2a str.
           301]
 gi|110642043|ref|YP_669773.1| flagellar hook-basal body protein FliE [Escherichia coli 536]
 gi|110805908|ref|YP_689428.1| flagellar hook-basal body protein FliE [Shigella flexneri 5 str.
           8401]
 gi|117624077|ref|YP_852990.1| flagellar hook-basal body protein FliE [Escherichia coli APEC O1]
 gi|161486198|ref|NP_754245.2| flagellar hook-basal body protein FliE [Escherichia coli CFT073]
 gi|162138421|ref|YP_541141.2| flagellar hook-basal body protein FliE [Escherichia coli UTI89]
 gi|191173295|ref|ZP_03034825.1| flagellar hook-basal body complex protein [Escherichia coli F11]
 gi|218558794|ref|YP_002391707.1| flagellar hook-basal body protein FliE [Escherichia coli S88]
 gi|218699503|ref|YP_002407132.1| flagellar hook-basal body protein FliE [Escherichia coli IAI39]
 gi|300940391|ref|ZP_07154976.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           21-1]
 gi|300975550|ref|ZP_07173061.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           45-1]
 gi|300994336|ref|ZP_07180867.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           200-1]
 gi|301050704|ref|ZP_07197565.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           185-1]
 gi|306814240|ref|ZP_07448406.1| flagellar hook-basal body protein FliE [Escherichia coli NC101]
 gi|38502954|sp|Q83R35|FLIE_SHIFL RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|38503026|sp|Q8FGL1|FLIE_ECOL6 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|122958273|sp|Q0TGQ7|FLIE_ECOL5 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|123146946|sp|Q0T3J2|FLIE_SHIF8 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214849|sp|A1AC86|FLIE_ECOK1 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704225|sp|B7MCJ3|FLIE_ECO45 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704227|sp|B7NRE7|FLIE_ECO7I RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|30041630|gb|AAP17358.1| flagellar hook-basal body 11K protein FliE [Shigella flexneri 2a
           str. 2457T]
 gi|56383555|gb|AAN43530.2| flagellar hook-basal body 11K protein FliE [Shigella flexneri 2a
           str. 301]
 gi|110343635|gb|ABG69872.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           536]
 gi|110615456|gb|ABF04123.1| flagellar hook-basal body complex protein FliE [Shigella flexneri 5
           str. 8401]
 gi|115513201|gb|ABJ01276.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
           APEC O1]
 gi|190906412|gb|EDV66021.1| flagellar hook-basal body complex protein [Escherichia coli F11]
 gi|218365563|emb|CAR03290.1| flagellar basal-body component [Escherichia coli S88]
 gi|218369489|emb|CAR17256.1| flagellar basal-body component [Escherichia coli IAI39]
 gi|281601378|gb|ADA74362.1| Flagellar hook-basal body complex protein fliE [Shigella flexneri
           2002017]
 gi|294491074|gb|ADE89830.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           IHE3034]
 gi|300297627|gb|EFJ54012.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           185-1]
 gi|300304922|gb|EFJ59442.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           200-1]
 gi|300410319|gb|EFJ93857.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           45-1]
 gi|300454785|gb|EFK18278.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           21-1]
 gi|305852399|gb|EFM52850.1| flagellar hook-basal body protein FliE [Escherichia coli NC101]
 gi|307626587|gb|ADN70891.1| flagellar hook-basal body protein FliE [Escherichia coli UM146]
 gi|313650157|gb|EFS14570.1| flagellar hook-basal body complex protein [Shigella flexneri 2a
           str. 2457T]
 gi|315286644|gb|EFU46077.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           110-3]
 gi|315290253|gb|EFU49631.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           153-1]
 gi|323952430|gb|EGB48303.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H252]
 gi|323956333|gb|EGB52076.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H263]
 gi|324013491|gb|EGB82710.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           60-1]
 gi|332756091|gb|EGJ86444.1| flagellar hook-basal body complex protein [Shigella flexneri
           4343-70]
 gi|332757268|gb|EGJ87605.1| flagellar hook-basal body complex protein [Shigella flexneri
           2747-71]
 gi|332757501|gb|EGJ87836.1| flagellar hook-basal body complex protein [Shigella flexneri K-671]
 gi|332766673|gb|EGJ96877.1| flagellar hook-basal body complex protein [Shigella flexneri
           2930-71]
 gi|333017674|gb|EGK36986.1| flagellar hook-basal body complex protein [Shigella flexneri K-304]
          Length = 104

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTVARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|333003032|gb|EGK22586.1| flagellar hook-basal body complex protein [Shigella flexneri VA-6]
          Length = 104

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAAIDRISDTQTVARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|330825933|ref|YP_004389236.1| flagellar hook-basal body complex protein fliE [Alicycliphilus
           denitrificans K601]
 gi|329311305|gb|AEB85720.1| Flagellar hook-basal body complex protein fliE [Alicycliphilus
           denitrificans K601]
          Length = 102

 Score = 58.1 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA--AL 66
            N   +  + +       + +++        F   ++           ++  +S      
Sbjct: 1   MNVTTNPLEALRPVTQAGKLASKTPSVQDGGFLDAMKQALSTTSKLQAESGRLSREVTLE 60

Query: 67  QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                + E +   +++      ++  R++I+ A ++V  MQ+
Sbjct: 61  NPTVGLEETMLAGVKSNIAFQATLQSRNRIVQAYTDVMNMQV 102


>gi|224437869|ref|ZP_03658816.1| flagellar hook-basal body protein FliE [Helicobacter cinaedi CCUG
           18818]
 gi|313144318|ref|ZP_07806511.1| flagellar hook-basal body complex protein fliE [Helicobacter
           cinaedi CCUG 18818]
 gi|313129349|gb|EFR46966.1| flagellar hook-basal body complex protein fliE [Helicobacter
           cinaedi CCUG 18818]
          Length = 101

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
              +  N +     + F   L+   +    + + +E        G+   + +A   I +A
Sbjct: 16  GNQKVENTQNRQDGLDFINTLKSSIQEVNTEQQISEKALADMASGQVKDLHQAAIAINRA 75

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E ++ + + +R+K ++A  E+ + QI
Sbjct: 76  ENSMKVMLEVRNKAINAYKEILRTQI 101


>gi|83719579|ref|YP_440759.1| flagellar hook-basal body complex protein [Burkholderia
           thailandensis E264]
 gi|167579441|ref|ZP_02372315.1| flagellar hook-basal body complex protein [Burkholderia
           thailandensis TXDOH]
 gi|257140591|ref|ZP_05588853.1| flagellar hook-basal body complex protein [Burkholderia
           thailandensis E264]
 gi|83653404|gb|ABC37467.1| flagellar hook-basal body complex protein [Burkholderia
           thailandensis E264]
          Length = 114

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGS-----SPISFSALLQDMAKGAIGDME 56
           M+  + G  S +     +  +      S     +     +  SF++ ++   +   GD +
Sbjct: 1   MVAPVNGIASALQQMQAMAAQAAGGAASPAASLAGSGAATAGSFASAMKASLEKISGDQQ 60

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           KA   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 61  KALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 114


>gi|114570486|ref|YP_757166.1| flagellar hook-basal body protein FliE [Maricaulis maris MCS10]
 gi|114340948|gb|ABI66228.1| flagellar hook-basal body complex subunit FliE [Maricaulis maris
           MCS10]
          Length = 106

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 46/107 (42%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +    ++ +   +   +     + +    S  + F +LL +        +  +E +
Sbjct: 1   MAADLSAVQAYQAAIRSAQ-QSSLGSSQDSAAASGGLDFGSLLGNAIADTSQTLAHSERM 59

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + A   G+  + + V  +  AE +L   +A+RD+++ A  E+ +M I
Sbjct: 60  TAAGAAGEAELIDVVTAVSAAEISLETVVAVRDEVVKAYQEILRMPI 106


>gi|295678024|ref|YP_003606548.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1002]
 gi|295437867|gb|ADG17037.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           CCGE1002]
          Length = 111

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQN--SNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   +   +S +     +  +        + + G ++P +F+A L+        D +KA 
Sbjct: 1   MTMPVNALSSALQQMQAMAAQAAGGATPVAEQSGAATPTNFAAALKASLDKISSDQQKAI 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S A   G    S+ + +  + +A       + +R+K+++A +++++M I
Sbjct: 61  GESQAFELGASNVSLNDVMVDMQKANIGFQFGLQVRNKLVAAYNDIAQMSI 111


>gi|194439601|ref|ZP_03071674.1| flagellar hook-basal body complex protein [Escherichia coli 101-1]
 gi|218695542|ref|YP_002403209.1| flagellar hook-basal body protein FliE [Escherichia coli 55989]
 gi|218705430|ref|YP_002412949.1| flagellar hook-basal body protein FliE [Escherichia coli UMN026]
 gi|256022405|ref|ZP_05436270.1| flagellar hook-basal body protein FliE [Escherichia sp. 4_1_40B]
 gi|293405420|ref|ZP_06649412.1| fliE [Escherichia coli FVEC1412]
 gi|293410292|ref|ZP_06653868.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B354]
 gi|298381063|ref|ZP_06990662.1| flagellar hook-basal body complex protein fliE [Escherichia coli
           FVEC1302]
 gi|307138604|ref|ZP_07497960.1| flagellar hook-basal body protein FliE [Escherichia coli H736]
 gi|331663433|ref|ZP_08364343.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA143]
 gi|331683489|ref|ZP_08384090.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H299]
 gi|254789308|sp|B7L8U9|FLIE_ECO55 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|194421510|gb|EDX37524.1| flagellar hook-basal body complex protein [Escherichia coli 101-1]
 gi|218352274|emb|CAU98031.1| flagellar basal-body component [Escherichia coli 55989]
 gi|218432527|emb|CAR13420.1| flagellar basal-body component [Escherichia coli UMN026]
 gi|284921845|emb|CBG34920.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           042]
 gi|291427628|gb|EFF00655.1| fliE [Escherichia coli FVEC1412]
 gi|291470760|gb|EFF13244.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B354]
 gi|298278505|gb|EFI20019.1| flagellar hook-basal body complex protein fliE [Escherichia coli
           FVEC1302]
 gi|323972763|gb|EGB67963.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA007]
 gi|331059232|gb|EGI31209.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA143]
 gi|331079704|gb|EGI50901.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H299]
 gi|332343663|gb|AEE56997.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           UMNK88]
          Length = 104

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS   T  M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQTTAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|56964035|ref|YP_175766.1| flagellar hook-basal body complex protein FliE [Bacillus clausii
           KSM-K16]
 gi|56910278|dbj|BAD64805.1| flagellar hook-basal body complex protein FliE [Bacillus clausii
           KSM-K16]
          Length = 98

 Score = 57.7 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHI 79
           ++   TQ    E  S    F + L +       D   +   + A ++ +   + + +   
Sbjct: 10  LQPLATQAGKTEVTSKGADFKSALLNALHSVNQDQLASSEATQALVKQEPIDVHDVMIAA 69

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  ++  ++ +R+K + A  E+ +MQI
Sbjct: 70  SKASVSMQAALEVRNKAVEAYQEMMRMQI 98


>gi|254496580|ref|ZP_05109448.1| flagellar hook-basal body complex protein [Legionella drancourtii
           LLAP12]
 gi|254354204|gb|EET12871.1| flagellar hook-basal body complex protein [Legionella drancourtii
           LLAP12]
          Length = 104

 Score = 57.7 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           + ++  + +       + S  +  ++   FSA+ Q          EKA+++      G  
Sbjct: 5   NTVNLFNQMQSMAAKAEGSIVDTQANQSPFSAVFQKAMNQVSNLNEKADSLKTRYELGDS 64

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +    ++   L  +I +R+K L A  ++  M +
Sbjct: 65  KVSIGEVMIATQKSNIGLEAAIRVRNKFLQAYQDIMGMPV 104


>gi|227885635|ref|ZP_04003440.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
           83972]
 gi|227837208|gb|EEJ47674.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
           83972]
 gi|307553950|gb|ADN46725.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           ABU 83972]
          Length = 104

 Score = 57.7 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAELDRISDTQTVARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|157959914|ref|YP_001499948.1| flagellar hook-basal body complex subunit FliE [Shewanella pealeana
           ATCC 700345]
 gi|157844914|gb|ABV85413.1| flagellar hook-basal body complex subunit FliE [Shewanella pealeana
           ATCC 700345]
          Length = 112

 Score = 57.3 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I   Q     ++    +         +  + G  P SF+ L+++       D   +  + 
Sbjct: 6   IASAQLMMQQLNIHSEMAKGAISVTPNPRDFGLQPPSFTELMKNKVAAVNTDQNASAALM 65

Query: 63  LAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G++  +  A+    +A    +  I +R++++ A  EV KM +
Sbjct: 66  RAVDTGQSGDLVGAMVASQKAGLAFSTMIQIRNRLVQAFDEVMKMPV 112


>gi|300931148|ref|ZP_07146496.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           187-1]
 gi|300461027|gb|EFK24520.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           187-1]
          Length = 104

 Score = 57.3 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQDSLPQP----SISFAGQLHAALDRISDTQTAARTEA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|319944161|ref|ZP_08018437.1| flagellar hook-basal body complex protein FliE [Lautropia mirabilis
           ATCC 51599]
 gi|319742456|gb|EFV94867.1| flagellar hook-basal body complex protein FliE [Lautropia mirabilis
           ATCC 51599]
          Length = 116

 Score = 57.3 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT--SMREAVDHIMQ 81
                + +  G++  SF +LL D  +        A+    A   G    ++   +  + +
Sbjct: 30  GAGMMAGQVEGAASGSFGSLLMDALRSVSSAQNVADKQQRAFEVGDAGATLESTMLAMQK 89

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           A+     ++ +R++++ A S++  MQ+
Sbjct: 90  AQIGFQSAVTVRNRLVQAYSDIMGMQV 116


>gi|307945653|ref|ZP_07660989.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
           TrichSKD4]
 gi|307771526|gb|EFO30751.1| flagellar hook-basal body complex protein FliE [Roseibium sp.
           TrichSKD4]
          Length = 110

 Score = 57.3 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 44/104 (42%)

Query: 5   QIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
                 S       I         +  +  +  + F  ++Q+     +     A+  ++ 
Sbjct: 7   ANNAYQSAARMAQQIAQNEAKVAQNEAKVKTPDVDFGQMVQEAVSNIVQQGRDADQKAMG 66

Query: 65  ALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++GKT + + V  I +AE  L + +++ D+++SA  E+ +M I
Sbjct: 67  LVEGKTDVVDVVTAIAEAEVALEMMVSVCDRVISAYEEIKRMPI 110


>gi|254234236|ref|ZP_04927559.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa C3719]
 gi|896312|gb|AAB06800.1| flagellar basal body component [Pseudomonas aeruginosa]
 gi|126166167|gb|EAZ51678.1| flagellar hook-basal body complex protein FliE [Pseudomonas
           aeruginosa C3719]
          Length = 109

 Score = 57.3 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 34  GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIA 91
            +   SFS +L           + +  ++ A   G+    + + +    +A  +      
Sbjct: 33  EAGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQ 92

Query: 92  LRDKILSAVSEVSKMQI 108
           +R+K++ A  ++ +M +
Sbjct: 93  VRNKLVQAYQDIMQMPV 109


>gi|332296505|ref|YP_004438428.1| flagellar hook-basal body complex protein FliE [Thermodesulfobium
           narugense DSM 14796]
 gi|332179608|gb|AEE15297.1| flagellar hook-basal body complex protein FliE [Thermodesulfobium
           narugense DSM 14796]
          Length = 94

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPIS-FSALLQDMAKGAIGDMEKAENVSLAALQGKTSMRE 74
              +          N  G S P S F   L D        +++ +  +     GK  +  
Sbjct: 1   MKPVEPINPNITPINLTGKSEPTSNFKDALMDFLGNVNSSLKEGDRAAEQLAAGKIDLPT 60

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
           A+     A  ++ L +++R +++ A  ++S++
Sbjct: 61  ALIKQEDAVLSMQLLMSVRSELIGAYQDLSRI 92


>gi|333004040|gb|EGK23574.1| flagellar hook-basal body complex protein [Shigella flexneri K-272]
 gi|333017813|gb|EGK37120.1| flagellar hook-basal body complex protein [Shigella flexneri K-227]
          Length = 104

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTVARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++   EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAVYQEVMSMQV 104


>gi|229826301|ref|ZP_04452370.1| hypothetical protein GCWU000182_01673 [Abiotrophia defectiva ATCC
           49176]
 gi|229789171|gb|EEP25285.1| hypothetical protein GCWU000182_01673 [Abiotrophia defectiva ATCC
           49176]
          Length = 111

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA---IGDMEK 57
           M+I  I    S +     I      +  +    G+    F ++ +               
Sbjct: 1   MIIMDIAAIGSLVP-LKNINGINTKSSQAGIVQGNGSEGFESIFKSALDMVKQTNDLTNA 59

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           AE   +    G +  +   +    +A  +L  ++A+R+ ++SA  E+  +Q
Sbjct: 60  AEQEEMKFALGNSDNIANLMVAQRKANISLQYTVAIRNAVMSAYREIMNLQ 110


>gi|78067881|ref|YP_370650.1| flagellar hook-basal body complex protein FliE [Burkholderia sp.
           383]
 gi|123567412|sp|Q39C10|FLIE_BURS3 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|77968626|gb|ABB10006.1| Flagellar hook-basal body complex protein FliE [Burkholderia sp.
           383]
          Length = 114

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSAL-----LQDMAKGAIGDME 56
           M   + G  S +    ++  +      S     +   + +A      ++       GD +
Sbjct: 1   MTANVSGIGSVLQQMQSMAAQASGGVASPTAALAGSGAATASTFASAMKASLDKISGDQQ 60

Query: 57  KAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   + A   G    S+ + +  + +A       + +R+K++SA +++ +M +
Sbjct: 61  HALGEAQAFEVGAPNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNDIMQMSV 114


>gi|332162914|ref|YP_004299491.1| flagellar hook-basal body complex protein FliE [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667144|gb|ADZ43788.1| Flagellar hook-basal body complex protein FliE [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330862342|emb|CBX72502.1| flagellar hook-basal body complex protein fliE [Yersinia
           enterocolitica W22703]
          Length = 126

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           ++Q+    S          +   +    +  G+SP SFS +L+            A +  
Sbjct: 20  MQQMAAIASNRVEFGITLPQPAGSSLFAQGNGASPPSFSRVLRGAINSVDNLQHVASDKQ 79

Query: 63  LAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G +  +   +    +A    +  + +R+K+ +A+ EV    +
Sbjct: 80  TAMDMGVSDDLSGTMLASQKASVAFSAMVQVRNKLTTALDEVMNTAL 126


>gi|157159221|ref|YP_001463239.1| flagellar hook-basal body protein FliE [Escherichia coli E24377A]
 gi|191168294|ref|ZP_03030087.1| flagellar hook-basal body complex protein [Escherichia coli B7A]
 gi|166988339|sp|A7ZN60|FLIE_ECO24 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|157081251|gb|ABV20959.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           E24377A]
 gi|190901666|gb|EDV61422.1| flagellar hook-basal body complex protein [Escherichia coli B7A]
          Length = 104

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISLLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|256830791|ref|YP_003159519.1| flagellar hook-basal body complex subunit FliE [Desulfomicrobium
           baculatum DSM 4028]
 gi|256579967|gb|ACU91103.1| flagellar hook-basal body complex subunit FliE [Desulfomicrobium
           baculatum DSM 4028]
          Length = 107

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQ 81
                  N     +  SF+  +++          +   +    + GK  ++ E +  + +
Sbjct: 21  PKSLDAKNNSTKEATQSFAETIEESLAKVNDMQGEKSLMIQDFVSGKNQNVHELMITLQK 80

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQ 107
           A   ++++ A+R+K++ A  E+ ++Q
Sbjct: 81  AGLAMDMTSAVRNKVMQAYQEIMRIQ 106


>gi|298530644|ref|ZP_07018046.1| flagellar hook-basal body complex subunit FliE [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510018|gb|EFI33922.1| flagellar hook-basal body complex subunit FliE [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 106

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIM 80
           +      +      +   F+  LQ             + +  A   GKT ++ E +  + 
Sbjct: 19  QNMAGGKAASGSNKAYNDFADTLQSSLGEVNNLQTDKKEMIEAFASGKTQNVHELMISLE 78

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQ 107
           +A   + ++ A+R+K++ +  E+ +M 
Sbjct: 79  KAGVAMQMTSAVRNKVMESYRELMQMP 105


>gi|222112251|ref|YP_002554515.1| flagellar hook-basal body complex subunit flie [Acidovorax ebreus
           TPSY]
 gi|221731695|gb|ACM34515.1| flagellar hook-basal body complex subunit FliE [Acidovorax ebreus
           TPSY]
          Length = 103

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMREA 75
            +       + +  + G     FS+  ++  +      ++A  +   +       S+ E 
Sbjct: 11  PLTGTQVARRVTAPQEGVQEAGFSSAFKNALQSVSAAQDQASGLQREVQLENPNVSIEET 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  + +A+     ++ +R++++ A +++  MQ+
Sbjct: 71  MVAMQKAQIGFQATLHVRNRMVQAYTDIMNMQV 103


>gi|157373219|ref|YP_001471819.1| flagellar hook-basal body complex subunit FliE [Shewanella
           sediminis HAW-EB3]
 gi|157315593|gb|ABV34691.1| flagellar hook-basal body complex subunit FliE [Shewanella
           sediminis HAW-EB3]
          Length = 112

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           Q     +S    +         + ++ G  P SF+ L++        D   +  +  A  
Sbjct: 10  QSMMDTLSIHSEMAKGAIKITPNPKDHGLQPASFTELMESKVAAVNLDQNTSSALMRAVD 69

Query: 67  QGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            G++  +  A+    +A  + +  I +R++++ A  EV KM +
Sbjct: 70  SGESDDLVGAMVASQKASLSFSTMIQIRNRLVQAFDEVMKMPL 112


>gi|111115117|ref|YP_709735.1| flagellar hook-basal body protein FliE [Borrelia afzelii PKo]
 gi|110890391|gb|ABH01559.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
          Length = 111

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + N    +   +F  +L +              V   A+       + + V  + +A  
Sbjct: 29  SSKNTAKNNDIKTFKDVLINTITDVNKSQLNVPKVMEQAIFRPSSIDVHDFVIAMSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGVKAYQDIINI 110


>gi|187918166|ref|YP_001883729.1| flagellar hook-basal body protein FliE [Borrelia hermsii DAH]
 gi|119861014|gb|AAX16809.1| flagellar hook-basal body complex protein FliE [Borrelia hermsii
           DAH]
          Length = 109

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 34  GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIA 91
                +F  L  ++             +S  A+       + + V  + +A   L+++ A
Sbjct: 34  EEKDKTFKDLFFNLMSDVNNSQLDVSKMSQQAILKPNDIDVHDIVISMSKANMNLSITKA 93

Query: 92  LRDKILSAVSEVSKM 106
           + +K + A  ++  +
Sbjct: 94  IVEKSIKAYQDIINI 108


>gi|330447942|ref|ZP_08311590.1| flagellar hook-basal body complex protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492133|dbj|GAA06087.1| flagellar hook-basal body complex protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 123

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 49/109 (44%), Gaps = 1/109 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M+E++Q           +       + +N +  SSP+SFS  +  +        + A +
Sbjct: 15  LMLEKMQQMQQRTQADFIVKPNMMTVEATNTQFTSSPLSFSQAMTGVLNTVNQHQKTASD 74

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A  + +  + +R+K++++  +V KM +
Sbjct: 75  KITAVELGQSDDLVGAMVASQKASLSFSALMQVRNKVVASFEDVMKMPV 123


>gi|114765222|ref|ZP_01444354.1| flagellar hook-basal body protein FliE [Pelagibaca bermudensis
           HTCC2601]
 gi|114542357|gb|EAU45385.1| flagellar hook-basal body protein FliE [Roseovarius sp. HTCC2601]
          Length = 109

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 42/98 (42%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           +  S              ++        SF+ ++      A+  + +AE  +   L+G  
Sbjct: 12  NAASGAYRASQDMTAAPVADLGSDEGKPSFADMVAQAGSDAVQTIREAEVTAQTGLRGNA 71

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +  V+  ++ + T+  ++A+RDK++ A  E+ +M I
Sbjct: 72  DTQAVVEATLELDSTVKTAVAVRDKLVEAYQEIIRMPI 109


>gi|82543598|ref|YP_407545.1| flagellar hook-basal body protein FliE [Shigella boydii Sb227]
 gi|157161408|ref|YP_001458726.1| flagellar hook-basal body protein FliE [Escherichia coli HS]
 gi|193066394|ref|ZP_03047442.1| flagellar hook-basal body complex protein [Escherichia coli E22]
 gi|194429922|ref|ZP_03062432.1| flagellar hook-basal body complex protein [Escherichia coli B171]
 gi|209919359|ref|YP_002293443.1| flagellar hook-basal body protein FliE [Escherichia coli SE11]
 gi|218554517|ref|YP_002387430.1| flagellar hook-basal body protein FliE [Escherichia coli IAI1]
 gi|218689932|ref|YP_002398144.1| flagellar hook-basal body protein FliE [Escherichia coli ED1a]
 gi|260844336|ref|YP_003222114.1| flagellar basal-body component protein FliE [Escherichia coli
           O103:H2 str. 12009]
 gi|293446317|ref|ZP_06662739.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B088]
 gi|312973847|ref|ZP_07788019.1| flagellar hook-basal body complex protein [Escherichia coli
           1827-70]
 gi|331653348|ref|ZP_08354353.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M718]
 gi|331668627|ref|ZP_08369475.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA271]
 gi|331677818|ref|ZP_08378493.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H591]
 gi|123559959|sp|Q322P1|FLIE_SHIBS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166988340|sp|A8A1D9|FLIE_ECOHS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704228|sp|B7M377|FLIE_ECO8A RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704230|sp|B6I0Y4|FLIE_ECOSE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|254789309|sp|B7MWC6|FLIE_ECO81 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|81245009|gb|ABB65717.1| FliE [Shigella boydii Sb227]
 gi|157067088|gb|ABV06343.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           HS]
 gi|192925979|gb|EDV80625.1| flagellar hook-basal body complex protein [Escherichia coli E22]
 gi|194412011|gb|EDX28323.1| flagellar hook-basal body complex protein [Escherichia coli B171]
 gi|209912618|dbj|BAG77692.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           SE11]
 gi|218361285|emb|CAQ98869.1| flagellar basal-body component [Escherichia coli IAI1]
 gi|218427496|emb|CAR08392.2| flagellar basal-body component [Escherichia coli ED1a]
 gi|257759483|dbj|BAI30980.1| flagellar basal-body component protein FliE [Escherichia coli
           O103:H2 str. 12009]
 gi|291323147|gb|EFE62575.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B088]
 gi|309702226|emb|CBJ01543.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           ETEC H10407]
 gi|310332442|gb|EFP99677.1| flagellar hook-basal body complex protein [Escherichia coli
           1827-70]
 gi|320186948|gb|EFW61662.1| Flagellar hook-basal body complex protein FliE [Shigella flexneri
           CDC 796-83]
 gi|320198626|gb|EFW73226.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
           EC4100B]
 gi|323158584|gb|EFZ44598.1| flagellar hook-basal body complex protein [Escherichia coli
           E128010]
 gi|323183921|gb|EFZ69308.1| flagellar hook-basal body complex protein [Escherichia coli 1357]
 gi|323186390|gb|EFZ71739.1| flagellar hook-basal body complex protein [Escherichia coli 1357]
 gi|323937207|gb|EGB33487.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           E1520]
 gi|324118986|gb|EGC12875.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           E1167]
 gi|331049446|gb|EGI21518.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M718]
 gi|331063821|gb|EGI35732.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA271]
 gi|331074278|gb|EGI45598.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H591]
 gi|332096882|gb|EGJ01871.1| flagellar hook-basal body complex protein [Shigella boydii 3594-74]
          Length = 104

 Score = 57.3 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|224534296|ref|ZP_03674874.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
 gi|224514398|gb|EEF84714.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
          Length = 115

 Score = 57.3 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDK 95
            +F  +L +              V   A+       + + V  + +A   L++  A+ ++
Sbjct: 44  KTFKDVLINTVTDVNKSQLNVSKVMEQAILRPSNIDVHDFVIAMSKANMNLSILKAVVER 103

Query: 96  ILSAVSEVSKM 106
            + A  ++  +
Sbjct: 104 GVKAYQDIINI 114


>gi|323139653|ref|ZP_08074695.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
           ATCC 49242]
 gi|322395085|gb|EFX97644.1| flagellar hook-basal body complex protein FliE [Methylocystis sp.
           ATCC 49242]
          Length = 108

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 50/84 (59%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
             Q++     ++  SF  +LQ  A  A+  ++  E  +++ ++GK ++ + VD IM AER
Sbjct: 25  QAQSARPAADAAGSSFGEVLQKFAADAVDSLKSGEAAAISGVEGKLAVHKVVDAIMSAER 84

Query: 85  TLNLSIALRDKILSAVSEVSKMQI 108
            LN  IALRDK ++A  E+S+M I
Sbjct: 85  DLNTVIALRDKAVNAYQEISRMAI 108


>gi|167567192|ref|ZP_02360108.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           oklahomensis EO147]
          Length = 132

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFI-SHTDTIGMRYDFTQNSNEEGG--SSPISFSALLQDMAKGAIGDMEK 57
           +++E I+   + + S    +G +         E G  +  ++F+++              
Sbjct: 21  LIMEPIEQVAAELHSQMAELGRQASAAVLPAAERGRVADDVNFASVFSRAVDDVDSKQTF 80

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +         G++  +  A+    +A  + ++   +R+K+ +A+ ++ KMQI
Sbjct: 81  SAEKMSDVDSGRSDDLIGAMLASQEASLSFSMLTQVRNKLTAAMDDLLKMQI 132


>gi|152980352|ref|YP_001353132.1| flagellar hook-basal body protein FliE [Janthinobacterium sp.
           Marseille]
 gi|151280429|gb|ABR88839.1| FliE flagellar hook-basal body protein [Janthinobacterium sp.
           Marseille]
          Length = 122

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I+ +       +              +  E  ++   FS  L+            A  + 
Sbjct: 15  IDAMVAQLRAAAARSQAPSVNPLGGMAQPEKTATRADFSQALKASLDNVASAQNSANQMG 74

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G    ++ + +  + +A  +   ++ +R+K++SA  E+  MQ+
Sbjct: 75  EKFSMGDDSVNLSDVMVSMQKASISFQATVQVRNKLVSAYQEMMNMQV 122


>gi|58039960|ref|YP_191924.1| flagellar hook-basal body protein FleE [Gluconobacter oxydans 621H]
 gi|58002374|gb|AAW61268.1| Flagellar hook-basal body protein FleE [Gluconobacter oxydans 621H]
          Length = 115

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAE 83
               ++     SS   F ++L       I     AE  +   L G   M + V  +  A+
Sbjct: 31  GIQSSATTASSSSGTDFGSILSQSVSSVIDGGHDAETKAAQGLTGGGDMTQIVTAVSNAQ 90

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
             L  +  +RD+++ A  +V KM I
Sbjct: 91  LALQTTTVIRDRMVQAYQDVMKMTI 115


>gi|53717873|ref|YP_106859.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei K96243]
 gi|167717603|ref|ZP_02400839.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei DM98]
 gi|167813744|ref|ZP_02445424.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 91]
 gi|167892354|ref|ZP_02479756.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 7894]
 gi|167909067|ref|ZP_02496158.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 112]
 gi|217424998|ref|ZP_03456494.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 576]
 gi|237810413|ref|YP_002894864.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei MSHR346]
 gi|254197064|ref|ZP_04903488.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei S13]
 gi|254295775|ref|ZP_04963232.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 406e]
 gi|52208287|emb|CAH34219.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei K96243]
 gi|157806004|gb|EDO83174.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 406e]
 gi|169653807|gb|EDS86500.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei S13]
 gi|217392018|gb|EEC32044.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 576]
 gi|237503631|gb|ACQ95949.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei MSHR346]
          Length = 113

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSAL----LQDMAKGAIGDMEK 57
           M+  + G  S +     +  +     +       S  + +      ++       GD +K
Sbjct: 1   MVAPVNGIASALQQMQAMAAQAAGGTSPATSLAGSGAASAGSFASAMKASLDKISGDQQK 60

Query: 58  AENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 61  ALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 113


>gi|15802372|ref|NP_288398.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           EDL933]
 gi|15831930|ref|NP_310703.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           str. Sakai]
 gi|16129884|ref|NP_416447.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74312477|ref|YP_310896.1| flagellar hook-basal body protein FliE [Shigella sonnei Ss046]
 gi|89108769|ref|AP_002549.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
           W3110]
 gi|168751864|ref|ZP_02776886.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168758249|ref|ZP_02783256.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168764440|ref|ZP_02789447.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168771542|ref|ZP_02796549.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777362|ref|ZP_02802369.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783332|ref|ZP_02808339.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168790306|ref|ZP_02815313.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC869]
 gi|168802282|ref|ZP_02827289.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC508]
 gi|170019730|ref|YP_001724684.1| flagellar hook-basal body protein FliE [Escherichia coli ATCC 8739]
 gi|170081581|ref|YP_001730901.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170682525|ref|YP_001743308.1| flagellar hook-basal body protein FliE [Escherichia coli SMS-3-5]
 gi|188491837|ref|ZP_02999107.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           53638]
 gi|195939242|ref|ZP_03084624.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           str. EC4024]
 gi|208810269|ref|ZP_03252145.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208816697|ref|ZP_03257817.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208819679|ref|ZP_03259999.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209396041|ref|YP_002271052.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4115]
 gi|215487137|ref|YP_002329568.1| flagellar hook-basal body protein FliE [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328613|ref|ZP_03444694.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. TW14588]
 gi|238901142|ref|YP_002926938.1| flagellar basal-body component [Escherichia coli BW2952]
 gi|253773114|ref|YP_003035945.1| flagellar hook-basal body protein FliE [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254793587|ref|YP_003078424.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           str. TW14359]
 gi|256017870|ref|ZP_05431735.1| flagellar hook-basal body protein FliE [Shigella sp. D9]
 gi|260868530|ref|YP_003234932.1| flagellar basal-body component protein FliE [Escherichia coli
           O111:H- str. 11128]
 gi|261227568|ref|ZP_05941849.1| flagellar basal-body component [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254608|ref|ZP_05947141.1| flagellar basal-body component protein FliE [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283114|ref|YP_003499932.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
           O55:H7 str. CB9615]
 gi|300923901|ref|ZP_07139916.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           182-1]
 gi|300951561|ref|ZP_07165394.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           116-1]
 gi|300956548|ref|ZP_07168830.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           175-1]
 gi|307312477|ref|ZP_07592111.1| flagellar hook-basal body complex subunit FliE [Escherichia coli W]
 gi|312967134|ref|ZP_07781352.1| flagellar hook-basal body complex protein [Escherichia coli
           2362-75]
 gi|331657983|ref|ZP_08358945.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA206]
 gi|67463552|sp|P0A8T5|FLIE_ECOLI RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|67463555|sp|P0A8T6|FLIE_ECO57 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|123616923|sp|Q3Z0Q1|FLIE_SHISS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704226|sp|B5YRW4|FLIE_ECO5E RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704229|sp|B1X691|FLIE_ECODH RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|254789307|sp|B7USV1|FLIE_ECO27 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|259646000|sp|C4ZQL1|FLIE_ECOBW RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|12516041|gb|AAG56952.1|AE005416_6 flagellar biosynthesis; basal-body component, possibly at
           (MS-ring)-rod junction [Escherichia coli O157:H7 str.
           EDL933]
 gi|146000|gb|AAA23800.1| flagellar protein [Escherichia coli]
 gi|1736600|dbj|BAA15760.1| flagellar basal-body component [Escherichia coli str. K12 substr.
           W3110]
 gi|1788247|gb|AAC75004.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13362144|dbj|BAB36099.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           O157:H7 str. Sakai]
 gi|73855954|gb|AAZ88661.1| flagellar basal-body component [Shigella sonnei Ss046]
 gi|169754658|gb|ACA77357.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
           ATCC 8739]
 gi|169889416|gb|ACB03123.1| flagellar basal-body component [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170520243|gb|ACB18421.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           SMS-3-5]
 gi|187767406|gb|EDU31250.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014165|gb|EDU52287.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4113]
 gi|188487036|gb|EDU62139.1| flagellar hook-basal body complex protein (FliE) [Escherichia coli
           53638]
 gi|188999253|gb|EDU68239.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189354882|gb|EDU73301.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189359731|gb|EDU78150.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189365571|gb|EDU83987.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189370188|gb|EDU88604.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC869]
 gi|189375709|gb|EDU94125.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC508]
 gi|208724785|gb|EDZ74492.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208731040|gb|EDZ79729.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208739802|gb|EDZ87484.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209157441|gb|ACI34874.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209766888|gb|ACI81756.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
 gi|209766890|gb|ACI81757.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
 gi|209766892|gb|ACI81758.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
 gi|209766894|gb|ACI81759.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
 gi|209766896|gb|ACI81760.1| flagellar hook-basal body complex protein FliE [Escherichia coli]
 gi|215265209|emb|CAS09599.1| flagellar basal-body component [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217317960|gb|EEC26387.1| flagellar hook-basal body complex protein [Escherichia coli O157:H7
           str. TW14588]
 gi|222033676|emb|CAP76417.1| flagellar hook-basal body complex protein fliE [Escherichia coli
           LF82]
 gi|238861093|gb|ACR63091.1| flagellar basal-body component [Escherichia coli BW2952]
 gi|253324158|gb|ACT28760.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254592987|gb|ACT72348.1| flagellar basal-body component [Escherichia coli O157:H7 str.
           TW14359]
 gi|257764886|dbj|BAI36381.1| flagellar basal-body component protein FliE [Escherichia coli
           O111:H- str. 11128]
 gi|260448950|gb|ACX39372.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
           DH1]
 gi|281178999|dbj|BAI55329.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           SE15]
 gi|290762987|gb|ADD56948.1| Flagellar hook-basal body complex protein fliE [Escherichia coli
           O55:H7 str. CB9615]
 gi|300316648|gb|EFJ66432.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           175-1]
 gi|300419864|gb|EFK03175.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           182-1]
 gi|300449188|gb|EFK12808.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           116-1]
 gi|306907648|gb|EFN38151.1| flagellar hook-basal body complex subunit FliE [Escherichia coli W]
 gi|312288598|gb|EFR16500.1| flagellar hook-basal body complex protein [Escherichia coli
           2362-75]
 gi|312946530|gb|ADR27357.1| flagellar hook-basal body protein FliE [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315061237|gb|ADT75564.1| flagellar basal-body component [Escherichia coli W]
 gi|315136574|dbj|BAJ43733.1| flagellar hook-basal body complex protein fliE [Escherichia coli
           DH1]
 gi|315296470|gb|EFU55767.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           16-3]
 gi|320191910|gb|EFW66557.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
           O157:H7 str. EC1212]
 gi|320194350|gb|EFW68981.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
           WV_060327]
 gi|320641785|gb|EFX11173.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           str. G5101]
 gi|320647144|gb|EFX15977.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H-
           str. 493-89]
 gi|320652428|gb|EFX20726.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H-
           str. H 2687]
 gi|320658030|gb|EFX25792.1| flagellar hook-basal body protein FliE [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320658602|gb|EFX26296.1| flagellar hook-basal body protein FliE [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320668500|gb|EFX35327.1| flagellar hook-basal body protein FliE [Escherichia coli O157:H7
           str. LSU-61]
 gi|323168944|gb|EFZ54624.1| flagellar hook-basal body complex protein [Shigella sonnei 53G]
 gi|323180811|gb|EFZ66351.1| flagellar hook-basal body complex protein [Escherichia coli 1180]
 gi|323378186|gb|ADX50454.1| flagellar hook-basal body complex subunit FliE [Escherichia coli
           KO11]
 gi|323940404|gb|EGB36595.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           E482]
 gi|323948359|gb|EGB44346.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H120]
 gi|323961981|gb|EGB57580.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H489]
 gi|323968353|gb|EGB63760.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M863]
 gi|323977882|gb|EGB72968.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TW10509]
 gi|324005865|gb|EGB75084.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           57-2]
 gi|326342346|gb|EGD66127.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
           O157:H7 str. 1044]
 gi|326344851|gb|EGD68598.1| Flagellar hook-basal body complex protein FliE [Escherichia coli
           O157:H7 str. 1125]
 gi|327253068|gb|EGE64722.1| flagellar hook-basal body complex protein [Escherichia coli
           STEC_7v]
 gi|330911743|gb|EGH40253.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           AA86]
 gi|331056231|gb|EGI28240.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA206]
 gi|332093106|gb|EGI98170.1| flagellar hook-basal body complex protein [Shigella boydii 5216-82]
          Length = 104

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|322379366|ref|ZP_08053737.1| flagellar hook-basal body protein FliE [Helicobacter suis HS1]
 gi|322380863|ref|ZP_08054953.1| flagellar hook-basal body protein FliE [Helicobacter suis HS5]
 gi|321146714|gb|EFX41524.1| flagellar hook-basal body protein FliE [Helicobacter suis HS5]
 gi|321148184|gb|EFX42713.1| flagellar hook-basal body protein FliE [Helicobacter suis HS1]
          Length = 75

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKI 96
             FS +L+           +++        G+   + +A   I +AE ++ L + +R+K 
Sbjct: 4   GEFSQMLKQSIDELNNTQMQSDKALADMATGQVKDLHQAAIAIGKAETSMKLMLEVRNKA 63

Query: 97  LSAVSEVSKMQI 108
           +SA  E+ + QI
Sbjct: 64  ISAYKELLRTQI 75


>gi|216263737|ref|ZP_03435731.1| flagellar hook-basal body complex protein (FliE) [Borrelia afzelii
           ACA-1]
 gi|215979781|gb|EEC20603.1| flagellar hook-basal body complex protein (FliE) [Borrelia afzelii
           ACA-1]
          Length = 111

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + N    +   +F  +L +              V   A+       + + V  + +A  
Sbjct: 29  SSKNTAKNNDIKTFKDVLINTITDVNKSQLNVPRVMEQAIFRPSSIDVHDFVIAMSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGVKAYQDIINI 110


>gi|260855912|ref|YP_003229803.1| flagellar basal-body component protein FliE [Escherichia coli
           O26:H11 str. 11368]
 gi|257754561|dbj|BAI26063.1| flagellar basal-body component protein FliE [Escherichia coli
           O26:H11 str. 11368]
 gi|323152733|gb|EFZ39005.1| flagellar hook-basal body complex protein [Escherichia coli
           EPECa14]
          Length = 104

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHATLDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|254502943|ref|ZP_05115094.1| flagellar hook-basal body complex protein FliE [Labrenzia
           alexandrii DFL-11]
 gi|222439014|gb|EEE45693.1| flagellar hook-basal body complex protein FliE [Labrenzia
           alexandrii DFL-11]
          Length = 104

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSI 90
                  + F  ++Q   +  +     A+  ++  ++GKT + + V  + +AE TL   +
Sbjct: 27  PTPVREQVDFGQMVQSAVENVVDQGRVADAKAVGLIEGKTDVVDVVTAVAEAEVTLETMV 86

Query: 91  ALRDKILSAVSEVSKMQI 108
           A+RD+++SA  E+ +M I
Sbjct: 87  AVRDRVISAYEEIMRMPI 104


>gi|167626143|ref|YP_001676437.1| flagellar hook-basal body complex subunit FliE [Shewanella
           halifaxensis HAW-EB4]
 gi|167356165|gb|ABZ78778.1| flagellar hook-basal body complex subunit FliE [Shewanella
           halifaxensis HAW-EB4]
          Length = 112

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFT---QNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
           M    I  T S I   +              +  + G  P SF+ L++        D   
Sbjct: 1   MSNANIASTQSMIQQLNIHSEMAKGAIKVGPNPRDFGLQPASFTELMKHKVSSINADQNA 60

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  +  A   G++  +  A+    ++    +  I +R++++ A  +V KM I
Sbjct: 61  SSALVAAVDSGQSDDLVGAMVASQKSSLAFSAMIQIRNRLVQAFDDVMKMPI 112


>gi|121596095|ref|YP_987991.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
 gi|120608175|gb|ABM43915.1| flagellar hook-basal body complex subunit FliE [Acidovorax sp.
           JS42]
          Length = 103

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMREA 75
            +       + +  + G     FS+  ++  +      ++A  +   +       S+ E 
Sbjct: 11  PLTGTQVARRVTAPQEGVQEAGFSSAFRNALQSVSAAQDQASGLQREVQLENPNVSIEET 70

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  + +A+     ++ +R++++ A +++  MQ+
Sbjct: 71  MVAMQKAQIGFQATLHVRNRMVQAYTDIMNMQV 103


>gi|94495428|ref|ZP_01302008.1| flagellar hook-basal body complex protein [Sphingomonas sp. SKA58]
 gi|94424816|gb|EAT09837.1| flagellar hook-basal body complex protein [Sphingomonas sp. SKA58]
          Length = 109

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 33  GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIA 91
             S P +F+  L    +   G   +A   + +  +G+T  +   +    QA  +   ++ 
Sbjct: 33  QDSKPGAFTEALSSALQQVNGLQTQAGEAAASFERGETTDIAGVMLAKQQASVSFEATLQ 92

Query: 92  LRDKILSAVSEVSKMQI 108
           +R+K+LSA  ++  M +
Sbjct: 93  VRNKLLSAYKDIMSMPV 109


>gi|194292865|ref|YP_002008772.1| flie: flagellar biosynthesis protein; hook-basal body complex
           protein [Cupriavidus taiwanensis LMG 19424]
 gi|193226769|emb|CAQ72720.1| FliE: Flagellar Biosynthesis protein; hook-basal body complex
           protein [Cupriavidus taiwanensis LMG 19424]
          Length = 98

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-- 69
            +     +         S     +     S  LQ          E+A   + A   GK  
Sbjct: 1   MLQQLRGMSQVASGNATSQAAAPAGGGFASE-LQRSLGRINAAQERAYGQAEAFELGKPG 59

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ + +  + +A  +    + +R+++++A  E+  M +
Sbjct: 60  VALNDVMIDLQKANVSFQTGVQVRNRLVAAYQEMMNMPV 98


>gi|120597293|ref|YP_961867.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           W3-18-1]
 gi|146294562|ref|YP_001184986.1| flagellar hook-basal body complex subunit FliE [Shewanella
           putrefaciens CN-32]
 gi|120557386|gb|ABM23313.1| flagellar hook-basal body complex subunit FliE [Shewanella sp.
           W3-18-1]
 gi|145566252|gb|ABP77187.1| flagellar hook-basal body complex subunit FliE [Shewanella
           putrefaciens CN-32]
          Length = 112

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREA 75
             +         +  + G +  SF+ L++        D  ++     A   GK+  +  A
Sbjct: 20  REVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGA 79

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    +A  +    + +R++++ A  +V KM I
Sbjct: 80  MVASQKASLSFATMLQIRNRLVQAFDDVMKMPI 112


>gi|89056687|ref|YP_512138.1| flagellar hook-basal body protein FliE [Jannaschia sp. CCS1]
 gi|88866236|gb|ABD57113.1| flagellar hook-basal body complex protein FliE putative [Jannaschia
           sp. CCS1]
          Length = 95

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 29/88 (32%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIM 80
               +         ++     +L           +   E  + AA+         V  + 
Sbjct: 8   AARAYGDPRAAVPPTTAAQDPSLFAQAVGSFADTVANGEAQARAAMTTGADPHALVTALA 67

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           Q E  +   + +RD+++ A  E+ +M +
Sbjct: 68  QTELAVETVVTIRDRVVEAYQEILRMPV 95


>gi|78485784|ref|YP_391709.1| flagellar hook-basal body complex protein (FliE) [Thiomicrospira
           crunogena XCL-2]
 gi|123555317|sp|Q31FN8|FLIE_THICR RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|78364070|gb|ABB42035.1| Flagellar hook-basal body complex protein FliE [Thiomicrospira
           crunogena XCL-2]
          Length = 110

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 7   QGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL 66
           Q     +            +    E+G  S  +FS LL         +  K+  +  A  
Sbjct: 8   QSLMLQMRSLAAEAASQSQSVQKVEKGAQSAENFSDLLSQSVNAVATEQNKSSAMKTAFE 67

Query: 67  QG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +G    + E +    +A  +      +R+K++ A  ++  M I
Sbjct: 68  KGEDVDLTEVMVQAQKASLSFQAMTQVRNKLVEAYKDIKNMPI 110


>gi|27904572|ref|NP_777698.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Bp (Baizongia pistaciae)]
 gi|38257546|sp|Q89B01|FLIE_BUCBP RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|27903969|gb|AAO26803.1| flagellar hook-basal body complex protein FliE [Buchnera aphidicola
           str. Bp (Baizongia pistaciae)]
          Length = 100

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL--AALQGKT 70
           I + +      D     + E  + P +F     +  K    +     +        +  +
Sbjct: 3   IQNINNNLYSDDVIPYLSTEKITHPKNFYENFTNALKKTSANERNIFDKINNSQIDESNS 62

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S+ + +  + +   ++   + +++K++ +  E+  MQI
Sbjct: 63  SLNDIMVDLQKISISIQFLVQVKNKLVESYQEIMNMQI 100


>gi|172057889|ref|YP_001814349.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium
           sibiricum 255-15]
 gi|171990410|gb|ACB61332.1| flagellar hook-basal body complex subunit FliE [Exiguobacterium
           sibiricum 255-15]
          Length = 95

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHI 79
                   S     ++P  FS +L     G     + +    +    GKT  +   +   
Sbjct: 7   QSMQMVLPSQSVAKTTPSDFSEVLSQAMNGLNDAQQASSQARVDLATGKTTDLHNIMIKT 66

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A  ++ L+I +R+K + A  E+ +MQ+
Sbjct: 67  EEASLSMQLAIEVRNKGIEAYQEMMRMQL 95


>gi|329296247|ref|ZP_08253583.1| flagellar hook-basal body complex protein FliE [Plautia stali
           symbiont]
          Length = 108

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M    +Q   S I   +      + ++ + +   S   +F   L    +        A+ 
Sbjct: 1   MSFSAMQSVVSQIQ--NQAAQLAEPSRRAPDAPASGVPAFGEALASSLQQLNHLQVDAKQ 58

Query: 61  VSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            S   + G     + + +    +A   L   I +R+K++SA  E+  M +
Sbjct: 59  QSQRFMLGDAGVELNDVMISGQKAAMALTFGIQMRNKMVSAYQEIINMAV 108


>gi|262173381|ref|ZP_06041058.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           MB-451]
 gi|261890739|gb|EEY36726.1| flagellar hook-basal body complex protein FliE [Vibrio mimicus
           MB-451]
          Length = 119

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFT------QNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
             +      +S  D +  +             +  G + P+SFS  + ++          
Sbjct: 8   NAVSAEQLMLSKMDAMSTQLKLPEFVVTDNPLDVRGLNEPLSFSQAMSNVLNTVNKHQSV 67

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A     A   G++  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 68  ASQKMTAVETGQSDDLVGAMVANQKASLSFNALMQVRNKVVNSFEDIMKMPV 119


>gi|260431751|ref|ZP_05785722.1| flagellar hook-basal body protein FliE [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415579|gb|EEX08838.1| flagellar hook-basal body protein FliE [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 96

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 37/90 (41%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDH 78
              +         +     +     L+   +     ++ +EN++ AA+ G+      V  
Sbjct: 7   SAAQSYAHARPATQADPDHVGSGQGLRATFQDFAATLKNSENIASAAMVGQADPHALVQA 66

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 67  LAQTELAVETAVVVRNKVVEAYQEILRMPV 96


>gi|254559208|ref|YP_003066303.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens DM4]
 gi|254266486|emb|CAX22250.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens DM4]
          Length = 117

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 2   MIEQIQGTNSF----------ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA 51
           MIE +    +F           + T                  ++P  F  ++  +A  A
Sbjct: 1   MIEALNSLAAFDKVAGTSFAGAAPTQKAMFSPAALSGIAGTAPTAPTDFGEVMAQVASSA 60

Query: 52  IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +   E  +++ +QGK + ++ V+ +M AE++L   +A+RDK+++A  E+S+M I
Sbjct: 61  RDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVLAIRDKVVAAYLELSRMPI 117


>gi|294679034|ref|YP_003579649.1| flagellar hook-basal body complex protein FliE [Rhodobacter
           capsulatus SB 1003]
 gi|294477854|gb|ADE87242.1| flagellar hook-basal body complex protein FliE [Rhodobacter
           capsulatus SB 1003]
          Length = 98

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 40/96 (41%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           I  +            +    G+S       L  +A   +  M+++E+ + AA+ G    
Sbjct: 3   IKTSLATQGYAQARSAATPLAGNSTADRDGGLGKIATSFLETMQQSEDTAKAAMLGNADP 62

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  HTLVQALAQTELAVETAVTVRNKVVEAYQEILRMPV 98


>gi|262273541|ref|ZP_06051355.1| flagellar hook-basal body complex protein FliE [Grimontia hollisae
           CIP 101886]
 gi|262222519|gb|EEY73830.1| flagellar hook-basal body complex protein FliE [Grimontia hollisae
           CIP 101886]
          Length = 114

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           ++ +    + I              N   +G +  +SFS ++    +      ++A    
Sbjct: 8   LDSVVSQINDIRQQVASINTLPIASNPMNQGAAENVSFSDVISSTIRSVDNMGKEASAQM 67

Query: 63  LAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G++  +  A+    +A  + +  + +R+ +++A ++V KM +
Sbjct: 68  HAVDTGQSDDLVGAMIASQKASLSFSAMVQVRNSLMTAYNDVMKMPV 114


>gi|163850062|ref|YP_001638105.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens PA1]
 gi|218528665|ref|YP_002419481.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           chloromethanicum CM4]
 gi|240137196|ref|YP_002961665.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens AM1]
 gi|163661667|gb|ABY29034.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens PA1]
 gi|218520968|gb|ACK81553.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           chloromethanicum CM4]
 gi|240007162|gb|ACS38388.1| Flagellar hook-basal body complex protein FliE [Methylobacterium
           extorquens AM1]
          Length = 117

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 2   MIEQIQGTNSF----------ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA 51
           MIE +    +F           + T                  ++P  F  ++  +A  A
Sbjct: 1   MIEALNSLAAFDKVAGTSFAGAAPTQKAMFSPAALSGIAGTAPTAPTDFGEVMAQVASSA 60

Query: 52  IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +   E  +++ +QGK + ++ V+ +M AE++L   +A+RDK+++A  E+S+M I
Sbjct: 61  RDALRTGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 117


>gi|254501297|ref|ZP_05113448.1| flagellar hook-basal body complex protein FliE [Labrenzia
           alexandrii DFL-11]
 gi|222437368|gb|EEE44047.1| flagellar hook-basal body complex protein FliE [Labrenzia
           alexandrii DFL-11]
          Length = 112

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDF-----TQNSNEEGGSSPISFSALLQDMAKGAIGDME 56
           MI +I    S  S    +           T         S  SFS  + ++++ AI  ++
Sbjct: 1   MINEISALTSAASSDGILKSSSTTRYMNSTPELGGTEAVSGPSFSDAMAEVSQSAIDKVK 60

Query: 57  KAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             E  ++A + G+ S+++ V+ +MQAE TL  +IA+RDK+++A  E+S+M I
Sbjct: 61  NGEAAAIAGVDGQASVQQVVEAVMQAESTLQTAIAIRDKVVTAYQEISRMTI 112


>gi|23009957|ref|ZP_00050815.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 107

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 48/107 (44%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M        +  ++     +         +   ++P  F+ +LQ    G      +A+  
Sbjct: 1   MTPMTTSAFAAGAYAAAQNIARPGAPKLTQGMAATPGGFTGMLQQSLDGVAQAGAQADRA 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +L+A  GK ++ + V  + ++E  L   +A+RD+++SA  E+ +M I
Sbjct: 61  ALSAAAGKANVVDVVTAVAESETALQTLVAVRDRVISAYEEIMRMPI 107


>gi|329896192|ref|ZP_08271386.1| flagellar hook-basal body complex protein (FliE) [gamma
           proteobacterium IMCC3088]
 gi|328921935|gb|EGG29301.1| flagellar hook-basal body complex protein (FliE) [gamma
           proteobacterium IMCC3088]
          Length = 98

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAAL-QGKT 70
                +      +    S  E  ++   FS  + D+ K       +A     +       
Sbjct: 1   MQQAQEVHRKSSELAAFSGLESSATTGKFSDSIMDVIKDVNSQQMQASETRASFEYSEDM 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + + +    +A      ++ +R+K+L A  ++  M +
Sbjct: 61  PLTQVILDTQKASIAFEATLQIRNKVLKAYQDIMSMPV 98


>gi|283832669|ref|ZP_06352410.1| flagellar hook-basal body complex protein FliE [Citrobacter youngae
           ATCC 29220]
 gi|291072343|gb|EFE10452.1| flagellar hook-basal body complex protein FliE [Citrobacter youngae
           ATCC 29220]
          Length = 104

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    I       M         +      +SF+  L             +   +
Sbjct: 1   MSAIQGIEGVIGQLQATAMSAKMQDVQPQPT----VSFAGQLHAALDRISDVQTASRVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K++SA  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMTDMQKASVSMQMGIQVRNKLVSAYQEVMSMQV 104


>gi|167949090|ref|ZP_02536164.1| flagellar protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 59

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++ A   G     + + +  + ++  + +  + +R+K++ A  +V  M I
Sbjct: 9   ALTQAFETGEKDLDLAQVMIAVQKSSLSFDAMVQVRNKLVEAYKDVMNMPI 59


>gi|188579866|ref|YP_001923311.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           populi BJ001]
 gi|179343364|gb|ACB78776.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           populi BJ001]
          Length = 117

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 10/117 (8%)

Query: 2   MIEQIQGTNSF----------ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGA 51
           MIE +   ++F           +               +    S+P  F  ++  +A  A
Sbjct: 1   MIEALSSLSAFDKIAGTSFAETAPAQKAAFSPAAVSGISGTAPSAPTDFGDVMAQVAASA 60

Query: 52  IGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +   E  +++ +QGK + ++ V+ +M AE++L   +A+RDK+++A  E+S+M I
Sbjct: 61  RDAIRGGEATAISGIQGKATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 117


>gi|22127340|ref|NP_670763.1| hypothetical protein y3465 [Yersinia pestis KIM 10]
 gi|45442784|ref|NP_994323.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108809070|ref|YP_652986.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           Antiqua]
 gi|108810736|ref|YP_646503.1| flagellar hook-basal body complex protein [Yersinia pestis
           Nepal516]
 gi|145597805|ref|YP_001161881.1| flagellar hook-basal body complex protein [Yersinia pestis
           Pestoides F]
 gi|150260261|ref|ZP_01916989.1| lateral flagellar basal body component [Yersinia pestis CA88-4125]
 gi|162421518|ref|YP_001604858.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Angola]
 gi|165925132|ref|ZP_02220964.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939055|ref|ZP_02227607.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008761|ref|ZP_02229659.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211950|ref|ZP_02237985.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398741|ref|ZP_02304265.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167418762|ref|ZP_02310515.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425205|ref|ZP_02316958.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167466353|ref|ZP_02331057.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           FV-1]
 gi|170022959|ref|YP_001719464.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis YPIII]
 gi|218927900|ref|YP_002345775.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           CO92]
 gi|229837396|ref|ZP_04457559.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           Pestoides A]
 gi|229840609|ref|ZP_04460768.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842840|ref|ZP_04462992.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229900933|ref|ZP_04516057.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           Nepal516]
 gi|270487685|ref|ZP_06204759.1| flagellar hook-basal body complex protein FliE [Yersinia pestis KIM
           D27]
 gi|294502777|ref|YP_003566839.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           Z176003]
 gi|21960422|gb|AAM87014.1|AE013949_8 hypothetical [Yersinia pestis KIM 10]
 gi|45437650|gb|AAS63200.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108774384|gb|ABG16903.1| flagellar hook-basal body complex protein [Yersinia pestis
           Nepal516]
 gi|108780983|gb|ABG15041.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           Antiqua]
 gi|115346511|emb|CAL19387.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           CO92]
 gi|145209501|gb|ABP38908.1| flagellar hook-basal body complex protein [Yersinia pestis
           Pestoides F]
 gi|149289669|gb|EDM39746.1| lateral flagellar basal body component [Yersinia pestis CA88-4125]
 gi|162354333|gb|ABX88281.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           Angola]
 gi|165913011|gb|EDR31636.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923332|gb|EDR40483.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992100|gb|EDR44401.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206696|gb|EDR51176.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962756|gb|EDR58777.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051245|gb|EDR62653.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055968|gb|EDR65749.1| flagellar hook-basal body complex protein FliE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749493|gb|ACA67011.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis YPIII]
 gi|229682272|gb|EEO78364.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           Nepal516]
 gi|229690107|gb|EEO82164.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696975|gb|EEO87022.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705519|gb|EEO91529.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           Pestoides A]
 gi|262360809|gb|ACY57530.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           D106004]
 gi|262364754|gb|ACY61311.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           D182038]
 gi|270336189|gb|EFA46966.1| flagellar hook-basal body complex protein FliE [Yersinia pestis KIM
           D27]
 gi|294353236|gb|ADE63577.1| putative flagellar hook-basal body complex protein [Yersinia pestis
           Z176003]
 gi|320016723|gb|ADW00295.1| Flagellar hook-basal body complex protein fliE [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 126

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q+           TI      +     E G++ +SFS +L    K        A    
Sbjct: 20  MRQMAAMAGSGLEFGTIQPAATNSPFFPVEKGANNLSFSQVLNGAIKSVDQLQHVASEKQ 79

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G    +   +    +A    +  + +R+K+ SA+ +V    +
Sbjct: 80  TAMDMGISDDLTGTMLASQKASVAFSAMVQVRNKLTSALDDVMNTAL 126


>gi|319781682|ref|YP_004141158.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167570|gb|ADV11108.1| flagellar hook-basal body complex protein FliE [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 108

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 2   MIEQIQGTNSFISHTDT-IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MI  I       S               +   GG+   SF+  L   A   +  M+ AE 
Sbjct: 1   MISGIGALQFKPSIGGDDAATSLLQGGATPSAGGNVGTSFAEALSQAASKTVDTMQNAEQ 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           VS+ AL+G    R+ VD +M A++ L  ++A+RDK++SA  EVS+M I
Sbjct: 61  VSMQALKGDADTRQVVDAVMSAQQALQTAVAIRDKVVSAYLEVSRMGI 108


>gi|153950291|ref|YP_001399622.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis IP 31758]
 gi|152961786|gb|ABS49247.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis IP 31758]
          Length = 126

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q+           TI      +     E G++ +SFS +L    K        A    
Sbjct: 20  MRQMAAMAGGGLEFGTIQPAAANSPFFPVEKGANNLSFSQVLNGAIKSVDQLQHVASEKQ 79

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G    +   +    +A    +  + +R+K+ SA+ +V    +
Sbjct: 80  TAMDMGISDDLTGTMLASQKASVAFSAMVQVRNKLTSALDDVMNTAL 126


>gi|254517006|ref|ZP_05129064.1| flagellar hook-basal body complex protein FliE [gamma
           proteobacterium NOR5-3]
 gi|219674511|gb|EED30879.1| flagellar hook-basal body complex protein FliE [gamma
           proteobacterium NOR5-3]
          Length = 107

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N  I+   ++                S  +FS+L+QD  +     M +++ ++ +   
Sbjct: 5   AINQVIAQMRSMASAAGAGSEVTGAEQVSGANFSSLMQDSIEEVNAAMMQSKALATSFEA 64

Query: 68  G--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G  + S+ E +    +A         +R+K+L+A  E+  MQ+
Sbjct: 65  GDPQVSITEVMVASQRAGLEFQAMTEVRNKLLTAYQEIMSMQV 107


>gi|258622515|ref|ZP_05717537.1| lateral flagellar FliE-like hook basal body protein [Vibrio mimicus
           VM573]
 gi|258624662|ref|ZP_05719597.1| lateral flagellar FliE-like hook basal body protein [Vibrio mimicus
           VM603]
 gi|258583054|gb|EEW07868.1| lateral flagellar FliE-like hook basal body protein [Vibrio mimicus
           VM603]
 gi|258585215|gb|EEW09942.1| lateral flagellar FliE-like hook basal body protein [Vibrio mimicus
           VM573]
          Length = 119

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFT------QNSNEEGGSSPISFSALLQDMAKGAIGDMEK 57
             +      +S  D +  +             +  G + P+SFS  + ++          
Sbjct: 8   NAVSAEQLMLSKMDAMSTQLKLPEFVVTDNPLDVRGLNEPLSFSQAMSNVLNTVNKHQSV 67

Query: 58  AENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A     A   G++  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 68  ASQKMTAVETGQSDDLVGAMVANQKASLSFNALMQVRNKVVNSFEDIMKMPV 119


>gi|157145270|ref|YP_001452589.1| flagellar hook-basal body protein FliE [Citrobacter koseri ATCC
           BAA-895]
 gi|157082475|gb|ABV12153.1| hypothetical protein CKO_01007 [Citrobacter koseri ATCC BAA-895]
          Length = 104

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         +      +SF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQDALPQPT----VSFAGQLHAALNRISDTQTTARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K++SA  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMTDMQKASVSMQMGIQVRNKLMSAYQEVMSMQV 104


>gi|54307258|ref|YP_128278.1| FliE-like hook basal body protein [Photobacterium profundum SS9]
 gi|46911678|emb|CAG18476.1| Hypothetical FliE-like hook basal body protein [Photobacterium
           profundum SS9]
          Length = 114

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDTIGMRY------DFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
           M + +   N  +S    I  +           N      ++ ++F+ ++           
Sbjct: 1   MQDNVMSMNLPLSQMSEIQAQMKTLEPIQIAPNPMTVNQANSVNFTDVISQTLNNVDLQG 60

Query: 56  EKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A  +  A   GK+  +  A+    +A  + +  + +R+K+L+A  +V KM +
Sbjct: 61  KEASALMTAVDTGKSDDLVGAMVASQKASLSFSALVQVRNKLLTAYDDVMKMPV 114


>gi|294339861|emb|CAZ88224.1| putative Flagellar hook-basal body complex protein FliE [Thiomonas
           sp. 3As]
          Length = 117

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 42/107 (39%), Gaps = 2/107 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q++   +         +  +          S    F+A L+    G  G+++ A  + 
Sbjct: 10  LAQMRSLTAQAQARPADAVGGNAAAALGATAASQQSDFAATLKSAIDGVSGELQHANALQ 69

Query: 63  LAAL--QGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
              +   G  S+ + +    +A  +    + +R+K++SA  ++  +Q
Sbjct: 70  QQFVSGTGDVSLSDVMLASQKASLSFQAVLQVRNKLVSAYQDIMNIQ 116


>gi|254488457|ref|ZP_05101662.1| flagellar hook-basal body complex protein FliE [Roseobacter sp.
           GAI101]
 gi|214045326|gb|EEB85964.1| flagellar hook-basal body complex protein FliE [Roseobacter sp.
           GAI101]
          Length = 65

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 34/65 (52%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           ++DMA      + + ++++  ++ G       V  + Q E  +  ++A+R+K++ A  E+
Sbjct: 1   MKDMALDFADTLARGDHIAKESMIGDADPHALVQALAQTELVVETAVAVRNKVVEAYQEI 60

Query: 104 SKMQI 108
            +M +
Sbjct: 61  LRMPV 65


>gi|119384844|ref|YP_915900.1| flagellar hook-basal body complex protein FliE [Paracoccus
           denitrificans PD1222]
 gi|119374611|gb|ABL70204.1| flagellar hook-basal body complex protein FliE [Paracoccus
           denitrificans PD1222]
          Length = 92

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQA 82
                +      +        + + A      ME+ +  +  A+ G+T   + V  I +A
Sbjct: 7   AATAYDRARHAVAPAQGLPQGVTNAAADFARVMEQVDLDAAGAMTGQTDTHDLVHSIARA 66

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E  L   +A+RDK++ A  E+ +M +
Sbjct: 67  EIALETVVAIRDKVVEAYQEILRMPV 92


>gi|91779981|ref|YP_555189.1| flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
 gi|91692641|gb|ABE35839.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
          Length = 116

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 6/110 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGG----SSPISFSALLQDMAKGAIGDMEKA 58
           + Q+    S +     +          N        +  +SF  LLQ             
Sbjct: 5   MNQVNPIASALQQIQAMQTEAAGYGTQNLAAALSSDAGSVSFGELLQKSLAKISDRQALG 64

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
           +    A   G    S+ + +    +A      S+ +R++++SA   + ++
Sbjct: 65  KREGQAFELGAPNVSLSDVMIDGAEAGIMFQDSLQIRNRLVSAYKTIMQL 114


>gi|119953091|ref|YP_945300.1| flagellar hook-basal body protein FliE [Borrelia turicatae 91E135]
 gi|119861862|gb|AAX17630.1| flagellar hook-basal body complex protein FliE [Borrelia turicatae
           91E135]
          Length = 109

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 37  PISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRD 94
             SF  L  ++             +S  A+       + +    + +A   L+++ A+ +
Sbjct: 37  AESFKDLFLNLISDVNNSQLDVSRMSQQAILQPNSVDVHDITIAMAKANMNLSITKAVVE 96

Query: 95  KILSAVSEVSKM 106
           + + A  +V  +
Sbjct: 97  RSIKAYQDVINI 108


>gi|203284213|ref|YP_002221953.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
 gi|203287752|ref|YP_002222767.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
 gi|201083656|gb|ACH93247.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
 gi|201084972|gb|ACH94546.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
          Length = 109

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 33  GGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSI 90
                 +F  L  ++             VS  A+       + + V  + +A   L+++ 
Sbjct: 33  SEKQAGTFRELFLNLISNVNNSQLDMYKVSQQAILHPDSVDVHDVVISMAKANMNLSITK 92

Query: 91  ALRDKILSAVSEVSKM 106
           A+ +K + A  +V  +
Sbjct: 93  AVVEKSIKAYQDVINI 108


>gi|224531885|ref|ZP_03672517.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           valaisiana VS116]
 gi|224511350|gb|EEF81756.1| flagellar hook-basal body complex protein (FliE) [Borrelia
           valaisiana VS116]
          Length = 111

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 26  TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAE 83
             + +    +   +F  +L +              V   A+       + + V  I +A 
Sbjct: 28  GSSKSIAKSNDIKTFKDVLINTITDVNKSQLNVSKVMEQAVLKPSSVDVHDFVIAISKAN 87

Query: 84  RTLNLSIALRDKILSAVSEVSKM 106
             L++  A+ ++ + A  ++  +
Sbjct: 88  MKLSILKAVVERGMKAYQDIINI 110


>gi|331005468|ref|ZP_08328847.1| hypothetical protein IMCC1989_1987 [gamma proteobacterium IMCC1989]
 gi|330420744|gb|EGG95031.1| hypothetical protein IMCC1989_1987 [gamma proteobacterium IMCC1989]
          Length = 62

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 51  AIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               + KAE        G+   +   +  + +A+ +  L++ +R+K+L    E+ KMQI
Sbjct: 4   INDQINKAEFNVRELAAGRADNLHHVMVSLSKAKLSFELAVEVRNKLLEGYQEIIKMQI 62


>gi|225569980|ref|ZP_03779005.1| hypothetical protein CLOHYLEM_06075 [Clostridium hylemonae DSM
           15053]
 gi|225161450|gb|EEG74069.1| hypothetical protein CLOHYLEM_06075 [Clostridium hylemonae DSM
           15053]
          Length = 102

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N FI+    +       +N N E   + + FS +  +  K         E        G+
Sbjct: 4   NGFITPIQRMDSIGTLKRNENVEQSGNSL-FSDIFNNAVKDVKDTQANLEQQQYLLATGQ 62

Query: 70  TS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                       +A+  +++ + LR+K L + +E+ ++ +
Sbjct: 63  IDDAHTVPIAASEAQMAVDMLVQLRNKALESYNELMRISL 102


>gi|167770219|ref|ZP_02442272.1| hypothetical protein ANACOL_01562 [Anaerotruncus colihominis DSM
           17241]
 gi|167667541|gb|EDS11671.1| hypothetical protein ANACOL_01562 [Anaerotruncus colihominis DSM
           17241]
          Length = 102

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
           FI+    I    +          +S I F++LLQ+          ++E  S+    G+  
Sbjct: 5   FIAPIQPIETFEEMRAGQKTASSASGIPFASLLQESLDELRRSQAQSEKDSIDLALGQGG 64

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +   + +    +  +  ++ L  + +SA  E+ +MQ+
Sbjct: 65  DLHTMMINSAALDTAVKTTVQLTTRAVSAYKEIMQMQV 102


>gi|171321208|ref|ZP_02910178.1| flagellar hook-basal body complex protein FliE [Burkholderia
           ambifaria MEX-5]
 gi|171093518|gb|EDT38688.1| flagellar hook-basal body complex protein FliE [Burkholderia
           ambifaria MEX-5]
          Length = 96

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 39  SFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKIL 97
           SF  L+    +     +  AE    A   G      E V  +  A   L  ++ +R +++
Sbjct: 26  SFGTLMMSGMQNLDRTLRAAEAAGTAFALGDERPPHEVVLALEDARLKLQFALNVRTRLV 85

Query: 98  SAVSEVSKMQI 108
               E+ +MQ+
Sbjct: 86  EGYQELMRMQL 96


>gi|74101646|gb|AAZ99736.1| FliEL [Aeromonas hydrophila]
          Length = 108

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M IE +    + +     +    +    S E   +S +SF+  ++D+          A  
Sbjct: 1   MKIEMMSSQVTLLQQMQEMQRVANQ-TPSIELNDASNVSFTDAMRDVVGRVNEQQNTASK 59

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A   G++  +  A+    +A  + +  + +R+K+++   ++ +M +
Sbjct: 60  LMTAVDAGQSDDLVGAMVASQKAGLSFSALMQVRNKLMTGFDDIMRMPL 108


>gi|294500940|ref|YP_003564640.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
           QM B1551]
 gi|294350877|gb|ADE71206.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
           QM B1551]
          Length = 96

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREA 75
                       ++   G +   FS  L+D           ++  +    +G    +++ 
Sbjct: 4   GISNQIAIAKTAASTSTGQTTQQFSTFLKDSINELNNTQRASDIATEKLAKGENVEIQDV 63

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    +A  T+  ++ +R+K + A  E+ +MQ+
Sbjct: 64  MITAQKASITMQTALEIRNKAVEAYQEMMRMQM 96


>gi|292487993|ref|YP_003530870.1| flagellar hook-basal body complex protein FliE [Erwinia amylovora
           CFBP1430]
 gi|292899213|ref|YP_003538582.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
           49946]
 gi|291199061|emb|CBJ46172.1| flagellar hook-basal body complex protein [Erwinia amylovora ATCC
           49946]
 gi|291553417|emb|CBA20462.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
           CFBP1430]
 gi|312172118|emb|CBX80375.1| Flagellar hook-basal body complex protein FliE [Erwinia amylovora
           ATCC BAA-2158]
          Length = 103

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG  S +    T  ++   ++       +S   F A L+            A + + 
Sbjct: 1   MAIQGIESVMQAMQTAALQASGSK----TDNASSADFGAELKAALNKISETQSAARDRAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   S+ + +  + ++  ++ + I +R+K++SA S++  MQ+
Sbjct: 57  QFELGKEGISLNDVMVDLQKSSVSMQMGIQVRNKLVSAYSDIMNMQV 103


>gi|32474825|ref|NP_867819.1| flagellar hook-basal body complex protein FliE [Rhodopirellula
           baltica SH 1]
 gi|32445365|emb|CAD75366.1| probable flagellar hook-basal body complex protein FliE
           [Rhodopirellula baltica SH 1]
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSAL---LQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
                 +      + +  S+  SF  +   L +  KG      +A+++  + L G   + 
Sbjct: 44  RGTNQAFSLLDPQSTQSNSTDSSFGEMGNLLMNQVKGVNSMQNQADSMVHSMLTGGDVNE 103

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            E +  + +A+    + + +R+K++ A  E+ ++QI
Sbjct: 104 AEVLTSVQKADLAFRMLMQIRNKLMDAYREIQQVQI 139


>gi|110632657|ref|YP_672865.1| flagellar hook-basal body protein FliE [Mesorhizobium sp. BNC1]
 gi|110283641|gb|ABG61700.1| flagellar hook-basal body complex protein FliE [Chelativorans sp.
           BNC1]
          Length = 102

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI  I    +               Q +     +   +FSA++ ++A   +  + KAEN+
Sbjct: 1   MISGIGNITNL-----PSTGTESVLQQAETAAPTDGDAFSAMVSELATNTVSRLTKAENL 55

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           SL ALQG    R  VD +M AE++L  +IA+RDKI+SA  E+S+M I
Sbjct: 56  SLQALQGDGDTRAVVDAVMDAEQSLQAAIAIRDKIVSAYLEISRMAI 102


>gi|218887375|ref|YP_002436696.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758329|gb|ACL09228.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 110

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDH 78
             +      +    G    SF+  L +          +   +  A   G+T ++ E +  
Sbjct: 21  AEQATRATAAPAASGVQAKSFTNTLSESLTKVNEMQTEKSQMIQAFASGETQNVHELMIT 80

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + +A   +N++ A+R+K++ A  E+S++Q
Sbjct: 81  LQKAGLAVNMTSAVRNKVMEAYKELSRIQ 109


>gi|291519598|emb|CBK74819.1| Flagellar hook-basal body protein [Butyrivibrio fibrisolvens 16/4]
          Length = 103

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 23  YDFTQNSNEEGGSSPISFSALLQDM---AKGAIGDMEKAENVSLAALQGKTS-MREAVDH 78
                N+  +   +   F ++L  +           + A    +A   G++    + +  
Sbjct: 14  ATPVSNTQVKKADNTTGFQSMLDSVMGLLDETNALQKVANREQVALELGESDNTHDLMIA 73

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A   L  ++A+RD+IL A  ++ +MQI
Sbjct: 74  EKKANTALQYTVAVRDRILEAYQQIMQMQI 103


>gi|293415247|ref|ZP_06657890.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B185]
 gi|291432895|gb|EFF05874.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           B185]
          Length = 104

 Score = 55.4 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      +SF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----MSFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|182680549|ref|YP_001834695.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182636432|gb|ACB97206.1| flagellar hook-basal body complex protein FliE [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 114

 Score = 55.4 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 55/101 (54%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
           G  S  +      +       +      S   FSA+L  +   A+ +++ AE  S++ LQ
Sbjct: 14  GLASVATDAVGKTITSIKRGPAASNITDSGTDFSAILSQVTNQAVDNLKTAEAASISGLQ 73

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           GK S+++ V+ +M A+++L  +IA+RDK++SA   +S+M I
Sbjct: 74  GKASVQQVVESMMTAQQSLQTAIAVRDKVVSAYQSISQMPI 114


>gi|317048598|ref|YP_004116246.1| flagellar hook-basal body complex subunit FliE [Pantoea sp. At-9b]
 gi|316950215|gb|ADU69690.1| flagellar hook-basal body complex subunit FliE [Pantoea sp. At-9b]
          Length = 103

 Score = 55.4 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
             I              +  +   +  + F A ++            A + +     GK 
Sbjct: 4   QAIDGVLQQLQLTSLQASGQQSDATQQVDFGATMKAALDKISETQNNARSQAQDFEMGKP 63

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++ + +  + ++  ++ + I +R+K++SA +++  MQ+
Sbjct: 64  GVALNDVMVDLQKSSISMQMGIQVRNKLVSAYTDIMNMQV 103


>gi|240145508|ref|ZP_04744109.1| flagellar hook-basal body complex protein FliE [Roseburia
           intestinalis L1-82]
 gi|257202323|gb|EEV00608.1| flagellar hook-basal body complex protein FliE [Roseburia
           intestinalis L1-82]
 gi|291536001|emb|CBL09113.1| flagellar hook-basal body complex protein FliE [Roseburia
           intestinalis M50/1]
 gi|291538495|emb|CBL11606.1| flagellar hook-basal body complex protein FliE [Roseburia
           intestinalis XB6B4]
          Length = 103

 Score = 55.4 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 35  SSPISFSALLQDMAK---GAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSI 90
           +S  SF ++L                AE   +    GK     +      +A   L  + 
Sbjct: 26  TSDDSFQSVLDSAMNVLSETSDLQNDAEAAQIEFALGKADNPHDMQIAAKKALTALQYTT 85

Query: 91  ALRDKILSAVSEVSKMQI 108
           A+RDK+L A  E+  MQI
Sbjct: 86  AVRDKMLDAYKEIMNMQI 103


>gi|296127543|ref|YP_003634795.1| flagellar hook-basal body complex subunit FliE [Brachyspira
           murdochii DSM 12563]
 gi|296019359|gb|ADG72596.1| flagellar hook-basal body complex subunit FliE [Brachyspira
           murdochii DSM 12563]
          Length = 109

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDK 95
            +F  +L D  +         +N+ + A     +  + + ++ I +AE +L+ + A+ D+
Sbjct: 38  SNFGTMLSDAIEAVNQKQVDRDNIIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVVDR 97

Query: 96  ILSAVSEV 103
            + A  EV
Sbjct: 98  AVRAYQEV 105


>gi|261341511|ref|ZP_05969369.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316308|gb|EFC55246.1| flagellar hook-basal body complex protein FliE [Enterobacter
           cancerogenus ATCC 35316]
          Length = 124

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTD-TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M++++  T +  S              +      +  +SFS +L +           A  
Sbjct: 16  MLDRLHNTAAVASSGGIGASTFIAPGADFPGVNSARDLSFSQVLNNAIDNVDAMQHAAGA 75

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A    +  + +R+K+ +A+ EV    +
Sbjct: 76  KQKAIELGQSDDLAGAMIESQKASVAFSAMMQVRNKLTTALDEVMNTPL 124


>gi|295690697|ref|YP_003594390.1| flagellar hook-basal body complex subunit FliE [Caulobacter segnis
           ATCC 21756]
 gi|295432600|gb|ADG11772.1| flagellar hook-basal body complex subunit FliE [Caulobacter segnis
           ATCC 21756]
          Length = 103

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 42/91 (46%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
           T G     +  S   G  + + F  +L+     A    + AE+     + GK  + + V 
Sbjct: 13  TSGAMGVGSVGSIGGGQKNGLDFGDILKSAMTDAAKASKVAEHKIADQVAGKAELVDVVT 72

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            I  AE +L   +++RD+++SA  E+ +M I
Sbjct: 73  AISSAEASLETVMSVRDQVISAYQEIMRMPI 103


>gi|255261247|ref|ZP_05340589.1| flagellar hook-basal body protein FliE [Thalassiobium sp. R2A62]
 gi|255103582|gb|EET46256.1| flagellar hook-basal body protein FliE [Thalassiobium sp. R2A62]
          Length = 95

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 36/93 (38%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
            ++     ++    N    +     S     +A      ++ +E  ++ A+         
Sbjct: 3   INSTFAAKNYAATRNATSPAENSGASDAFVKVASDFAETLQNSEQTAMNAMTSGADPHAL 62

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           V  + Q E  +  ++ +R+K++ A  E+ +M +
Sbjct: 63  VQALAQTELAIETAVTVRNKVVEAYQEILRMPV 95


>gi|253990093|ref|YP_003041449.1| flagellar hook-basal body complex protein flie [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781543|emb|CAQ84706.1| flagellar hook-basal body complex protein flie [Photorhabdus
           asymbiotica]
          Length = 103

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 36/110 (32%), Gaps = 9/110 (8%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+ I+G    +                          F++ L             A  
Sbjct: 1   MSIQAIEGVLQQMQAQALQSASIAKPMPLQG-------GFASQLMAAVGKINQTRLNATK 53

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +     G     + + +  + ++   L + + +R+K++++  E+  MQ+
Sbjct: 54  QAQDFTLGVPGIELNDVMVDMQKSSIALQMGVQVRNKLVASYQEIMNMQV 103


>gi|126176168|ref|YP_001052317.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS155]
 gi|304412520|ref|ZP_07394126.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS183]
 gi|307307179|ref|ZP_07586917.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           BA175]
 gi|125999373|gb|ABN63448.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS155]
 gi|304349162|gb|EFM13574.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           OS183]
 gi|306910418|gb|EFN40849.1| flagellar hook-basal body complex subunit FliE [Shewanella baltica
           BA175]
          Length = 112

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           I         ++    +        ++  + G +  SF+ L++        D  ++    
Sbjct: 6   IGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQSSMAM 65

Query: 63  LAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   GK+  +  A+    +A  +    + +R++++ A  +V KM I
Sbjct: 66  AAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI 112


>gi|162147441|ref|YP_001601902.1| flagellar hook-basal body complex protein fliE [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545551|ref|YP_002277780.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786018|emb|CAP55600.1| putative flagellar hook-basal body complex protein fliE
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533228|gb|ACI53165.1| flagellar hook-basal body complex protein FliE [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 113

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           ++ +                 D   N+      +   FS  L    KGAI   + AE  +
Sbjct: 10  LDAVNAYGLTQKTMQASADTQDADPNAQSSDVVTG--FSDALNSAIKGAIKTGKTAEAQT 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              L GK ++ +    + +A+ TL    A+RD+++ A   V +M I
Sbjct: 68  AVGLSGKGNLTDIATSVEEAKLTLQTVTAVRDRVVQAYQNVMQMTI 113


>gi|295706286|ref|YP_003599361.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
           DSM 319]
 gi|294803945|gb|ADF41011.1| flagellar hook-basal body complex protein FliE [Bacillus megaterium
           DSM 319]
          Length = 96

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 37/93 (39%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREA 75
                       ++   G +   FS  L+D           ++  +    +G    +++ 
Sbjct: 4   GISNQIAIAKTAASTSTGQTTQQFSTFLKDSINELNNTQRASDIATEKLAKGENVELQDV 63

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    +A  T+ +++ +R+K + A  E+ +MQ+
Sbjct: 64  MITAQKASITMQMALEIRNKAVEAYQEMMRMQM 96


>gi|222084864|ref|YP_002543393.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
 gi|254789304|sp|B9J966|FLIE_AGRRK RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|221722312|gb|ACM25468.1| flagellar hook-basal body protein [Agrobacterium radiobacter K84]
          Length = 116

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/106 (34%), Positives = 63/106 (59%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +   +G  S  +   +       +      G S+  SF++++ D+AK  +  +++AEN S
Sbjct: 11  LSATRGLGSIATDLSSAASNAIASTPETAIGSSAVGSFASVMSDVAKNTVSTLKEAENAS 70

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  S RE VD +MQA++TL  +IALRDK++SA  +++KMQI
Sbjct: 71  FAGIKGTMSTREVVDKVMQADQTLQTAIALRDKMVSAFLDITKMQI 116


>gi|300870980|ref|YP_003785851.1| putative flagellar hook basal body protein FliE [Brachyspira
           pilosicoli 95/1000]
 gi|300688679|gb|ADK31350.1| putative flagellar hook basal body protein, FliE [Brachyspira
           pilosicoli 95/1000]
          Length = 119

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDK 95
            +F  +L D  +         +N+ + A     +  + + ++ I +AE +L+ + A+ D+
Sbjct: 48  SNFGTMLSDAIESVNQKQVDKDNIIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVVDR 107

Query: 96  ILSAVSEV 103
            + A  EV
Sbjct: 108 AVRAYQEV 115


>gi|146278636|ref|YP_001168795.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556877|gb|ABP71490.1| hypothetical protein Rsph17025_2602 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 96

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
           ++  +            +  I  +A L   A+     +   E  + AA+ GK      V+
Sbjct: 6   SVAAQTYARARLATAPEAPSIGVAAALNRAAESFTETLAHGEETARAAMTGKADPHALVE 65

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  ++  +  ++ LRDK++ A  E+ +M +
Sbjct: 66  ALAASQTAVETAVTLRDKVVEAYQEILRMPV 96


>gi|145297443|ref|YP_001140284.1| lateral flagellar hook basal body protein, LfiE [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850215|gb|ABO88536.1| lateral flagellar hook basal body protein, LfiE [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 108

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M IE +    + +     +    +    S E   +S +SF+  ++D+          A  
Sbjct: 1   MKIEMMSSQVTLLQQMQEMQRVANQA-PSIELNDASNVSFTDAMRDVVGRVNEQQNIASK 59

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A   G++  +  A+    +A  + +  + +R+K+++   ++ +M +
Sbjct: 60  LMTAVDAGQSDDLVGAMVASQKAGLSFSALMQVRNKLMTGFDDIMRMPL 108


>gi|51597649|ref|YP_071840.1| flagellar hook-basal body complex protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186896783|ref|YP_001873895.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590931|emb|CAH22587.1| possible flagellar hook-basal body complex protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699809|gb|ACC90438.1| flagellar hook-basal body complex protein FliE [Yersinia
           pseudotuberculosis PB1/+]
          Length = 126

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           + Q+           TI      +     E G++ +SFS +L    K        A    
Sbjct: 20  MRQMAAMAGSGLEFGTIQPAATNSPFFPVEKGANNLSFSQVLNGAIKSVDQLQHVASEKQ 79

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G    +   +    +A    +  + +R+K+ SA+ +V    +
Sbjct: 80  TAMDMGISDDLTGTMLASQKASVAFSAMVQVRNKLTSALDDVMNTAL 126


>gi|94496254|ref|ZP_01302832.1| flagellar hook-basal body complex protein [Sphingomonas sp. SKA58]
 gi|94424433|gb|EAT09456.1| flagellar hook-basal body complex protein [Sphingomonas sp. SKA58]
          Length = 116

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 4/108 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +   N+ +    +             +G +   SF+A +Q   +      E+ +  
Sbjct: 12  MRNAVLQRNAALRDVGSASSPNALRGP---DGTAPSTSFAATMQTALQKVNALQEQEDVA 68

Query: 62  SLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    +G+T  +        +A  +   ++ +R+K+LSA  +V  M +
Sbjct: 69  TETYERGETTDIATVALIQQRASVSFEATLQVRNKVLSAYKDVMSMAV 116


>gi|194434950|ref|ZP_03067193.1| flagellar hook-basal body complex protein [Shigella dysenteriae
           1012]
 gi|194416785|gb|EDX32911.1| flagellar hook-basal body complex protein [Shigella dysenteriae
           1012]
 gi|332095485|gb|EGJ00501.1| flagellar hook-basal body complex protein [Shigella dysenteriae
           155-74]
          Length = 104

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 +   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLSEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|161502910|ref|YP_001570022.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189044494|sp|A9MML1|FLIE_SALAR RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|160864257|gb|ABX20880.1| hypothetical protein SARI_00969 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 104

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS                E      +SF+  L            +A   +
Sbjct: 1   MAAIQGIEGVISQLQATA----VGARGQETQSQPTMSFAGQLHAALDRISDRQTEARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|167900851|ref|ZP_02488056.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 113

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSAL----LQDMAKGAIGDMEK 57
           M+  + G  S +     +  +     +       S  + +      ++       GD +K
Sbjct: 1   MVAPVNGIASALQQMQAMAAQAAGGASPATSLAGSGAAGAGSFASAMKASLDKISGDQQK 60

Query: 58  AENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 61  ALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 113


>gi|53724866|ref|YP_104754.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           ATCC 23344]
 gi|67641496|ref|ZP_00440273.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           GB8 horse 4]
 gi|121600050|ref|YP_994241.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei SAVP1]
 gi|124385420|ref|YP_001028105.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei NCTC 10229]
 gi|126440843|ref|YP_001057276.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 668]
 gi|126448363|ref|YP_001082915.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei NCTC 10247]
 gi|126453483|ref|YP_001064518.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1106a]
 gi|134283602|ref|ZP_01770301.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 305]
 gi|167004330|ref|ZP_02270090.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           PRL-20]
 gi|167822260|ref|ZP_02453731.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 9]
 gi|167843854|ref|ZP_02469362.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei B7210]
 gi|167917108|ref|ZP_02504199.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei BCC215]
 gi|226199850|ref|ZP_03795401.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei Pakistan 9]
 gi|242314584|ref|ZP_04813600.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1106b]
 gi|254174676|ref|ZP_04881337.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei ATCC 10399]
 gi|254182182|ref|ZP_04888779.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1655]
 gi|254188112|ref|ZP_04894624.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254259914|ref|ZP_04950968.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1710a]
 gi|254359689|ref|ZP_04975960.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei 2002721280]
 gi|81603766|sp|Q62EX3|FLIE_BURMA RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214844|sp|A3MRM9|FLIE_BURM7 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214845|sp|A2S836|FLIE_BURM9 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214846|sp|A1V7N8|FLIE_BURMS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|166214847|sp|A3NQ97|FLIE_BURP0 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|52428289|gb|AAU48882.1| flagellar hook-basal body complex protein FliE, putative
           [Burkholderia mallei ATCC 23344]
 gi|121228860|gb|ABM51378.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei SAVP1]
 gi|124293440|gb|ABN02709.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           NCTC 10229]
 gi|126220336|gb|ABN83842.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 668]
 gi|126227125|gb|ABN90665.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1106a]
 gi|126241233|gb|ABO04326.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           NCTC 10247]
 gi|134245011|gb|EBA45106.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 305]
 gi|148028903|gb|EDK86835.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei 2002721280]
 gi|157935792|gb|EDO91462.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160695721|gb|EDP85691.1| putative flagellar hook-basal body complex protein FliE
           [Burkholderia mallei ATCC 10399]
 gi|184212720|gb|EDU09763.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1655]
 gi|225928201|gb|EEH24237.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei Pakistan 9]
 gi|238522439|gb|EEP85883.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           GB8 horse 4]
 gi|242137823|gb|EES24225.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1106b]
 gi|243060330|gb|EES42516.1| flagellar hook-basal body complex protein FliE [Burkholderia mallei
           PRL-20]
 gi|254218603|gb|EET07987.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1710a]
          Length = 113

 Score = 55.0 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSAL----LQDMAKGAIGDMEK 57
           M+  + G  S +     +  +     +       S  + +      ++       GD +K
Sbjct: 1   MVAPVNGIASALQQMQAMAAQAAGGASPATSLAGSGAASAGSFASAMKASLDKISGDQQK 60

Query: 58  AENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   + A   G    S+ + +  + +A       + +R+K++SA +E+ +M +
Sbjct: 61  ALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYNEIMQMSV 113


>gi|158422259|ref|YP_001523551.1| flagellar hook-basal body protein FliE [Azorhizobium caulinodans
           ORS 571]
 gi|158329148|dbj|BAF86633.1| flagellar hook-basal body complex protein [Azorhizobium caulinodans
           ORS 571]
          Length = 109

 Score = 55.0 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 2   MIEQIQGTNSFISHTDTIGMR--YDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           MIE +   +S +    +I                G     F  +L  +   A+  + + E
Sbjct: 1   MIETVSALSSSLRTPTSISSTKMETTETKLTALNGQQGADFGDVLASVTTDAMKTVRQGE 60

Query: 60  NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +AA+QGK S+++ V+ +M AE+TL  +IA+RDK+++A  EVS+M I
Sbjct: 61  AAGIAAIQGKASIQQVVEAVMSAEQTLQTAIAVRDKVVAAYQEVSRMAI 109


>gi|163744320|ref|ZP_02151680.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
           indolifex HEL-45]
 gi|161381138|gb|EDQ05547.1| flagellar hook-basal body complex protein FliE [Oceanibulbus
           indolifex HEL-45]
          Length = 110

 Score = 55.0 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 51/91 (56%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
           +  +     +   EE G+S  SF+ L+Q  ++ A+  +   E V+ A L+G+   ++ V+
Sbjct: 20  SQSLTGQKGEGIAEEAGASANSFTNLVQQASESALETVRGGEAVAQAGLRGEADTQQVVE 79

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            ++  E T+ +++++RD+ + A  E+ +M I
Sbjct: 80  AMLAMESTVKVAVSVRDRFVEAYQEILRMPI 110


>gi|260767965|ref|ZP_05876899.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
 gi|260615995|gb|EEX41180.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
          Length = 109

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                + +  + P+SFS+ +  +          A +   A   GK+  +  A+    +A 
Sbjct: 25  SANPLDVKAVNPPLSFSSAMTQVLDVVNQHQAVASSKMTAVETGKSDDLVGAMIASQKAS 84

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++++  ++ KM +
Sbjct: 85  LSFNALMQVRNKVVASFEDIMKMPV 109


>gi|237731984|ref|ZP_04562465.1| flagellar hook-basal body protein FliE [Citrobacter sp. 30_2]
 gi|226907523|gb|EEH93441.1| flagellar hook-basal body protein FliE [Citrobacter sp. 30_2]
          Length = 104

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         +      +SF+  L             +   +
Sbjct: 1   MSAIQGIEGVISQLQATAMSAKMQDMQPQPT----VSFAGQLHAALDRISDVQTASRTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K++SA  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMTDMQKASVSMQMGIQVRNKLVSAYQEVMSMQV 104


>gi|167736646|ref|ZP_02409420.1| flagellar hook-basal body complex protein [Burkholderia
           pseudomallei 14]
          Length = 80

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVS 101
           ++       GD +KA   + A   G    S+ + +  + +A       + +R+K++SA +
Sbjct: 14  MKASLDKISGDQQKALGEAHAFEIGAQNVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYN 73

Query: 102 EVSKMQI 108
           E+ +M +
Sbjct: 74  EIMQMSV 80


>gi|315654576|ref|ZP_07907482.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           ATCC 51333]
 gi|315657518|ref|ZP_07910400.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
 gi|315491040|gb|EFU80659.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           ATCC 51333]
 gi|315491990|gb|EFU81599.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
          Length = 143

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
            +           T    +    +  SF  +  D           A+ + + AL G+   
Sbjct: 47  TNAPSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNMQQRESTAKKLGVQALTGQLND 106

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + +      +++ T+ L+  +R+K +   +E+ +MQ
Sbjct: 107 VHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 142


>gi|149912831|ref|ZP_01901365.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. AzwK-3b]
 gi|149813237|gb|EDM73063.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. AzwK-3b]
          Length = 96

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 35/89 (39%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
            ++         E  +     +  +  +A+     ++     + AA+ G       V  +
Sbjct: 8   AVQKYAASRPATEPKAGAGGPAEAMMGLARDFAATLQDGGATAKAAMTGGADPHALVQAL 67

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            Q E  +  ++ +R++++ A  E+ +M +
Sbjct: 68  AQTELAVEAAVTVRNRVVEAYQEILRMPV 96


>gi|7387663|sp|P95713|FLIE_SHIBO RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|1772455|dbj|BAA14026.1| FliE [Shigella boydii]
          Length = 104

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    I       M     ++  +      ISF+  L             A   +
Sbjct: 1   MSAIQGIEGVIIQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                 +   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLSEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|254255066|ref|ZP_04948383.1| Flagellar hook-basal body protein [Burkholderia dolosa AUO158]
 gi|124899711|gb|EAY71554.1| Flagellar hook-basal body protein [Burkholderia dolosa AUO158]
          Length = 108

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 43/108 (39%), Gaps = 2/108 (1%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSS-PISFSALLQDMAKGAIGDMEKAENV 61
           +  I  T++ +    +             +   +    F+  ++   +        A + 
Sbjct: 1   MMDIALTSAMLESIQSGQPDVGAVAGHPADTADAHAGGFADAMKHAIEQVDAQQRTASDK 60

Query: 62  SLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             A  +G +  +  AV    QA+ + ++ + +R+K++SA  +V KM +
Sbjct: 61  LAAVDRGDSDDLVSAVLESQQADLSFSMMVQVRNKVMSAFDDVIKMPV 108


>gi|328545506|ref|YP_004305615.1| flagellar hook-basal body complex protein FliE [polymorphum gilvum
           SL003B-26A1]
 gi|326415247|gb|ADZ72310.1| Flagellar hook-basal body complex protein FliE [Polymorphum gilvum
           SL003B-26A1]
          Length = 107

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 58/107 (54%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+Q+    +  S   +   +  +     +  G    SFS  L  ++  AI  ++  E  
Sbjct: 1   MIDQLSALTASGSGLTSSVSQSRYVAAPAQADGVVEASFSDTLASVSMEAIERLKGGEAA 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +L+ +QGK S ++ V+ +M AE +L  +IA+RDK++SA  E+S+M I
Sbjct: 61  ALSGIQGKVSAQQVVEAVMAAEASLQTAIAIRDKVVSAYQEISRMTI 107


>gi|51598552|ref|YP_072740.1| flagellar hook-basal body protein FliE [Borrelia garinii PBi]
 gi|51573123|gb|AAU07148.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
          Length = 111

 Score = 54.6 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 7/82 (8%), Positives = 27/82 (32%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V    +       + +    + +A  
Sbjct: 29  SSKSSTKNNDAKTFKDVLINTITDINKSQLNVSKVMEQVVLSPSSVDVHDFAIALSKANM 88

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 89  NLSILKAVVERGIKAYQDIINI 110


>gi|330505662|ref|YP_004382531.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           mendocina NK-01]
 gi|328919948|gb|AEB60779.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           mendocina NK-01]
          Length = 111

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 36/97 (37%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           +     +G            G +    F+    D  +       ++  +  A   G++  
Sbjct: 15  MEQMKNVGETASIKPAQAFAGQAGEGGFATAFDDAVRAVDAQQHRSGALMAAVDSGQSDD 74

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A+    +A  + +  + +R+K+ SA  ++ KM +
Sbjct: 75  LVGAMIESQKASVSFSALMQVRNKLSSAFDDIMKMPL 111


>gi|209963542|ref|YP_002296457.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodospirillum centenum SW]
 gi|209957008|gb|ACI97644.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodospirillum centenum SW]
          Length = 104

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI    G     +     G+        +        SF+  ++   K AI  +   E +
Sbjct: 1   MIVPAAGVAKAYAAGKVAGI---AGPALDTATAPERGSFAGFVETAVKSAIKTVRTGEEM 57

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S A LQGK S +E V  +M AE T+   + +RDK++SA  ++ +M I
Sbjct: 58  SAAGLQGKASAQEVVQAVMSAEMTVQAVVTVRDKLVSAYLDIMRMGI 104


>gi|38502914|sp|Q7UNQ2|FLIE_RHOBA RecName: Full=Flagellar hook-basal body complex protein FliE
          Length = 128

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSAL---LQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
                 +      + +  S+  SF  +   L +  KG      +A+++  + L G   + 
Sbjct: 33  RGTNQAFSLLDPQSTQSNSTDSSFGEMGNLLMNQVKGVNSMQNQADSMVHSMLTGGDVNE 92

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            E +  + +A+    + + +R+K++ A  E+ ++QI
Sbjct: 93  AEVLTSVQKADLAFRMLMQIRNKLMDAYREIQQVQI 128


>gi|90422609|ref|YP_530979.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           BisB18]
 gi|90104623|gb|ABD86660.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris BisB18]
          Length = 106

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M+E I    S                   + G +  I F  +++ +A  AIG ++  E  
Sbjct: 1   MLETISSIVSSPGGLSKTTDVARSASALPQAG-APTIGFDGVMEQVAADAIGTLKAGEAA 59

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S++ +QGK S +  V+ +M AERTL +++A+RDK++ A  EVS+M I
Sbjct: 60  SISGMQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106


>gi|327539961|gb|EGF26560.1| flagellar hook-basal body complex protein FliE [Rhodopirellula
           baltica WH47]
          Length = 128

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSAL---LQDMAKGAIGDMEKAENVSLAALQG-KTSM 72
                 +      + +  S+  SF  +   L +  KG      +A+++  + L G   + 
Sbjct: 33  RGTNQAFSLLDPQSTQSNSTDSSFGEMGNLLMNQVKGVNSMQNQADSMVHSMLTGGDVNE 92

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            E +  + +A+    + + +R+K++ A  E+ ++QI
Sbjct: 93  AEVLTSVQKADLAFRMLMQIRNKLMDAYREIQQVQI 128


>gi|319405400|emb|CBI79019.1| Flagellar hook-basal body complex protein fliE [Bartonella sp. AR
           15-3]
          Length = 114

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGT------NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDM 55
           MIE +         +     +  I        +       + +SF  +L ++ +     +
Sbjct: 1   MIEALTSVVSHNVLDPLGQGSAQINSLNGQQVSPGIIERGNKVSFDQVLSEIVEVVGTKL 60

Query: 56  EKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + AE++S+  + G    +RE V+ +M AER+L+ +IALRDK++ A  EVS+MQI
Sbjct: 61  QTAESLSIGRISGNDVGVREVVNSVMAAERSLSTAIALRDKLVQAYLEVSRMQI 114


>gi|284041508|ref|YP_003391848.1| flagellar hook-basal body complex protein FliE [Conexibacter woesei
           DSM 14684]
 gi|283945729|gb|ADB48473.1| flagellar hook-basal body complex protein FliE [Conexibacter woesei
           DSM 14684]
          Length = 121

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT- 70
            I     +      T   +         F ++L +           A     A   G   
Sbjct: 24  QIQGVPDVPQAELLTPGVDGAQAGGGEGFGSMLANEIGKLSELQTHAAEAGQALATGTAT 83

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               AV  + +A+  +  +  +R +   A+SE+ + QI
Sbjct: 84  DPVSAVVAVEKAQLAMQFAGQIRTRGAEALSEIFRTQI 121


>gi|238752879|ref|ZP_04614344.1| Flagellar hook-basal body complex protein FliE [Yersinia rohdei
           ATCC 43380]
 gi|238708918|gb|EEQ01171.1| Flagellar hook-basal body complex protein FliE [Yersinia rohdei
           ATCC 43380]
          Length = 126

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           ++Q+          D             +    +  +FS + +            A N  
Sbjct: 20  MQQMAAMAGSSIQFDAASPEPAGNNIFAQGKEGNSPAFSQVFKGAINSVDNLQHVASNKQ 79

Query: 63  LAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G    +   +    +A    +  + +R+K+ +A+ EV    +
Sbjct: 80  TAMDMGISDDLTGTMLASQKASVAFSAMVQVRNKLTTALDEVMNTAL 126


>gi|219685758|ref|ZP_03540569.1| flagellar hook-basal body complex protein FliE [Borrelia garinii
           Far04]
 gi|219672697|gb|EED29725.1| flagellar hook-basal body complex protein FliE [Borrelia garinii
           Far04]
          Length = 110

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAER 84
            + +    +   +F  +L +              V   A+       + +    + +A  
Sbjct: 28  SSKSSTKNNDAKTFKDVLINTVTDINKSQLNVSKVMEQAVLRPSSVDVHDFAIALSKANM 87

Query: 85  TLNLSIALRDKILSAVSEVSKM 106
            L++  A+ ++ + A  ++  +
Sbjct: 88  NLSILKAVVERGIKAYQDIINI 109


>gi|212637768|ref|YP_002314293.1| flagellar hook-basal body complex protein FliE [Shewanella
           piezotolerans WP3]
 gi|212559252|gb|ACJ31706.1| Flagellar hook-basal body complex protein FliE [Shewanella
           piezotolerans WP3]
          Length = 112

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 1/102 (0%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
                +S    +         +  + G    SF+ L+Q+       D   +  +  A   
Sbjct: 11  SMMQQLSIHSEMAKGAIKVSPNPADSGMHAPSFTDLMQEKVAAINTDQNASSALMRAVDS 70

Query: 68  GKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G++  +   +    +A  + +  I +R++++ A  +V KM I
Sbjct: 71  GESDDLVGVMVASQKASLSFSTMIQIRNRLVQAFDDVMKMPI 112


>gi|260574404|ref|ZP_05842408.1| flagellar hook-basal body complex protein FliE [Rhodobacter sp.
           SW2]
 gi|259023300|gb|EEW26592.1| flagellar hook-basal body complex protein FliE [Rhodobacter sp.
           SW2]
          Length = 96

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
             +      S            A    +A      + + E  + AA+ G       V  +
Sbjct: 8   AAQTYAQARSAAAPQPQSGGAGAGFAKLAGDFAQTLAQGEQTARAAMTGGADPHALVQAL 67

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +E  +  ++ +RDK++ A  E+ +M +
Sbjct: 68  AASELAVETAVTVRDKVVEAYQEILRMPV 96


>gi|260768772|ref|ZP_05877706.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
 gi|260616802|gb|EEX41987.1| flagellar hook-basal body complex protein FliE [Vibrio furnissii
           CIP 102972]
          Length = 116

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 41  SALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSA 99
            +  + +        + AE    A   G++  +  A     +A+ + +  + +R+K++S 
Sbjct: 48  GSTFKQIFDTVDAHQKLAEAKITAVELGQSDDLIGATVAAQKAQLSFSALMQVRNKMVSN 107

Query: 100 VSEVSKMQI 108
            +++ KMQI
Sbjct: 108 FNDIIKMQI 116


>gi|219684513|ref|ZP_03539456.1| flagellar hook-basal body complex protein (FliE) [Borrelia garinii
           PBr]
 gi|219671875|gb|EED28929.1| flagellar hook-basal body complex protein (FliE) [Borrelia garinii
           PBr]
          Length = 110

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLN 87
           +    +   +F  +L +              V   A+       + +    + +A   L+
Sbjct: 31  SSTKNNDAKTFKDVLINTVTDINKSQLNVSKVMEQAVLRPSSVDVHDFAIALSKANMNLS 90

Query: 88  LSIALRDKILSAVSEVSKM 106
           +  A+ ++ + A  ++  +
Sbjct: 91  ILKAVVERGIKAYQDIINI 109


>gi|329298593|ref|ZP_08255929.1| lagellar hook-basal body complex protein fliE [Plautia stali
           symbiont]
          Length = 103

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
             I              +      +S + F A ++            A + +     GK 
Sbjct: 4   QAIDGALQQLQLTSLQASGKPTESASQLDFGATMKATLDKISATQTAARSQAQDFELGKP 63

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + + +  + ++  ++ + I +R+K+++A SE+  MQ+
Sbjct: 64  GIQLNDVMVDLQKSSISMQMGIQVRNKLVNAYSEIMSMQV 103


>gi|315179669|gb|ADT86583.1| hypothetical flagellar hook-basal body complex protein [Vibrio
           furnissii NCTC 11218]
          Length = 118

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                + +  + P+SFS+ +  +          A +   A   GK+  +  A+    +A 
Sbjct: 34  SANPLDVKAVNPPLSFSSAMTQVLDVVNQHQAVASSKMTAVETGKSDDLVGAMIASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++++  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVASFEDIMKMPV 118


>gi|259908757|ref|YP_002649113.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           Ep1/96]
 gi|224964379|emb|CAX55888.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           Ep1/96]
 gi|283478733|emb|CAY74649.1| Flagellar hook-basal body complex protein FliE [Erwinia pyrifoliae
           DSM 12163]
 gi|310767345|gb|ADP12295.1| Flagellar hook-basal body complex protein FliE [Erwinia sp. Ejp617]
          Length = 103

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG +S +    T  M+    +       +S   F A L+            A N + 
Sbjct: 1   MAIQGIDSVMQAMQTAAMQASGGK----TDNASSADFGAELKAALNKISETQSAARNQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               GK   S+ + +  + ++  ++ + I +R+K++SA S++  MQ+
Sbjct: 57  QFELGKEGISLNDVMVDLQKSSVSMQMGIQVRNKLVSAYSDIMNMQV 103


>gi|315180475|gb|ADT87389.1| hypothetical flagellar hook-basal body complex protein [Vibrio
           furnissii NCTC 11218]
          Length = 116

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 41  SALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSA 99
            +  + +        + AE    A   G++  +  A     +A+ + +  + +R+K++S 
Sbjct: 48  GSTFKQIFDTVDAHQKLAEAKITAVELGQSDDLIGATVAAQKAQLSFSALMQVRNKMVSN 107

Query: 100 VSEVSKMQI 108
            +++ KMQI
Sbjct: 108 FNDIIKMQI 116


>gi|157147121|ref|YP_001454440.1| hypothetical protein CKO_02898 [Citrobacter koseri ATCC BAA-895]
 gi|157084326|gb|ABV14004.1| hypothetical protein CKO_02898 [Citrobacter koseri ATCC BAA-895]
          Length = 122

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG- 68
            + ++   ++ +       SN  G S PISF+  L +           A     A   G 
Sbjct: 23  TASLASAGSVDVSLTIAPASNAFGVSEPISFAGALNNAIDNVDAIQHSAGAKQKAIDMGL 82

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              +  A+    +A    +  + +R+K+ +A+ EV  + +
Sbjct: 83  SDDLAGAMIESQKASVAFSAMMQVRNKLTTALDEVMNIPL 122


>gi|225619782|ref|YP_002721039.1| putative flagellar hook-basal body protein FliE [Brachyspira
           hyodysenteriae WA1]
 gi|225214601|gb|ACN83335.1| putative flagellar hook-basal body protein FliE [Brachyspira
           hyodysenteriae WA1]
          Length = 123

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVDHIMQAERTLNLSIALRDK 95
            +F  +L D            +N+ + A     +  + + ++ I +AE +L+ + A+ D+
Sbjct: 52  SNFGTMLSDAIDAVNQKQVDRDNIIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVIDR 111

Query: 96  ILSAVSEV 103
            + A  EV
Sbjct: 112 AVRAYQEV 119


>gi|149195178|ref|ZP_01872269.1| flagellar hook-basal body protein FliE [Caminibacter mediatlanticus
           TB-2]
 gi|149134730|gb|EDM23215.1| flagellar hook-basal body protein FliE [Caminibacter mediatlanticus
           TB-2]
          Length = 98

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQA 82
           + T  + ++  ++ ++FS +L+         M+KAE  S     G+   + +A   I +A
Sbjct: 13  NLTSINKQQKNNNELNFSDVLKKELNETNNLMQKAEKASADIASGEVQDLAKASITIQKA 72

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQI 108
           E  + + + +R+K ++A  E+ K QI
Sbjct: 73  EMKMKMMLEVRNKAINAYKELLKTQI 98


>gi|171057702|ref|YP_001790051.1| flagellar hook-basal body complex subunit FliE [Leptothrix
           cholodnii SP-6]
 gi|170775147|gb|ACB33286.1| flagellar hook-basal body complex subunit FliE [Leptothrix
           cholodnii SP-6]
          Length = 122

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS--LAALQGKTSMRE 74
                           GG     FS +             KA+ +   +A      S+ E
Sbjct: 29  SAQAAGLSGAAGPAASGGVEKAGFSQVFSQALNNVSQAQMKAQGMQREVALDNPTVSLEE 88

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  + +A+     ++ +R+K++ A S++  MQ+
Sbjct: 89  TMVAMQRAQIGFQATLQVRNKLVQAYSDIMNMQV 122


>gi|23008563|ref|ZP_00049956.1| COG1677: Flagellar hook-basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 116

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS---------NEEGGSSPISFSALLQDMAKGAI 52
           MIE +    +F     T        Q +              ++P  F  ++  +A  A 
Sbjct: 1   MIEALTSLAAFDKVAGTSFAETAPAQKAVFSPAAVAGIAGPAAAPTDFGDVMAQVAASAR 60

Query: 53  GDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +   E  ++A +QG+ + ++ V+ +M AE++L   +A+RDK+++A  E+S+M I
Sbjct: 61  DALRGGEATAIAGIQGRATAQQVVEAVMSAEQSLQTVVAIRDKVVAAYLELSRMPI 116


>gi|11095418|gb|AAG29858.1|AF313764_1 flagellar hook-basal body complex protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|4378872|gb|AAD19740.1| flagellar hook-basal body complex protein [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 113

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+    T         +   +       +SF+  L +          ++     A  +G+
Sbjct: 14  NAAGLSTSATKDVGGVSSVVDGSKSGGILSFNDALNEAMSSVNDSYIQSTEAQDAYQKGE 73

Query: 70  T-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           T  +   +    +A      ++ +R++++ A   +  M +
Sbjct: 74  TTDIASVMLSRQKASVAFQATLQMRNRLMDAYKTIMNMSV 113


>gi|325109011|ref|YP_004270079.1| flagellar hook-basal body complex protein fliE [Planctomyces
           brasiliensis DSM 5305]
 gi|324969279|gb|ADY60057.1| Flagellar hook-basal body complex protein fliE [Planctomyces
           brasiliensis DSM 5305]
          Length = 100

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSL-AALQGKTSMREAVDHIMQAERTLNLS 89
               +  + F +LL            +A+       L    +  E    + +AE  L + 
Sbjct: 22  SSPKAPDVDFQSLLATSLSQTNQLEHQAQANIEGRLLGEDITSAEVYTSLRKAEMALKMM 81

Query: 90  IALRDKILSAVSEVSKMQI 108
             +R+K++ A  E+ +M+I
Sbjct: 82  TQVRNKLIDAFQEIQQMRI 100


>gi|149191162|ref|ZP_01869420.1| putative flagellar hook-basal body complex protein [Vibrio shilonii
           AK1]
 gi|148835000|gb|EDL51979.1| putative flagellar hook-basal body complex protein [Vibrio shilonii
           AK1]
          Length = 127

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 3/104 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEKAENVSLAA 65
            TN F + T           ++ +   +S  +  FS   + +          A +   A 
Sbjct: 24  ATNPFSNQTVVSAAVKGVIHDNTQVNPASESALQFSHAFKGILDTVDKYQAHASDKITAV 83

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             GK+  +  A     +A+ + N  + +R+K++S   ++ KM I
Sbjct: 84  ELGKSDDLLGATVASQKAQLSFNALMQVRNKMVSNFQDIIKMPI 127


>gi|260752869|ref|YP_003225762.1| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|283856294|ref|YP_162367.2| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|258552232|gb|ACV75178.1| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|283775290|gb|AAV89256.2| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 124

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+    T         +   +       +SF+  L +          ++     A  +G+
Sbjct: 25  NAAGLSTSATKDVGGVSSVVDGSKSGGILSFNDALNEAMSSVNDSYIQSTEAQDAYQKGE 84

Query: 70  T-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           T  +   +    +A      ++ +R++++ A   +  M +
Sbjct: 85  TTDIASVMLSRQKASVAFQATLQMRNRLMDAYKTIMNMSV 124


>gi|238762372|ref|ZP_04623343.1| Flagellar hook-basal body complex protein FliE [Yersinia
           kristensenii ATCC 33638]
 gi|238699357|gb|EEP92103.1| Flagellar hook-basal body complex protein FliE [Yersinia
           kristensenii ATCC 33638]
          Length = 126

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           ++Q+    S      T   +   +    +  G +  SFS +   +          A +  
Sbjct: 20  MQQMAAIASNRVEFSTALPQPTGSSLFAQVNGVNSPSFSRVFNGVINSVDNLQHVASDKQ 79

Query: 63  LAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G +  +   +    +A    +  + +R+K+ +A+ EV    +
Sbjct: 80  TAMDMGVSDDLTGTMLASQKASVAFSAMVQVRNKLTTALDEVMNTAL 126


>gi|304390253|ref|ZP_07372207.1| possible flagellar hook-basal body complex subunit FliE [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|304326735|gb|EFL93979.1| possible flagellar hook-basal body complex subunit FliE [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 143

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
            + +         T    +    +  SF  +  D           A+ + + AL G+   
Sbjct: 47  TNASSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNMQQRESTAKKLGVQALTGQLND 106

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + +      +++ T+ L+  +R+K +   +E+ +MQ
Sbjct: 107 VHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 142


>gi|84502402|ref|ZP_01000538.1| flagellar biosynthesis protein [Oceanicola batsensis HTCC2597]
 gi|84389214|gb|EAQ02011.1| flagellar biosynthesis protein [Oceanicola batsensis HTCC2597]
          Length = 108

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREA 75
            +  ++    Q +   G +  ++F+ L++D A+G++  + +AE V  A + G   S ++ 
Sbjct: 16  SSSRLQGGPGQLAGAAGDADKVNFAELVRDAAQGSMQTIREAEQVQQAGMVGENVSAQQV 75

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           V+  ++ E TL L++++RD+++ A  ++ +M I
Sbjct: 76  VEATLEMETTLRLAVSVRDRLVEAYQQIMQMPI 108


>gi|204931002|ref|ZP_03221828.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204320046|gb|EDZ05251.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 104

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         +    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGVISQLQATAMAARG----QDTHSQSTVSFAGQLHAALDRISDRQTTARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|217976224|ref|YP_002360371.1| flagellar hook-basal body complex protein FliE [Methylocella
           silvestris BL2]
 gi|217501600|gb|ACK49009.1| flagellar hook-basal body complex protein FliE [Methylocella
           silvestris BL2]
          Length = 104

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 51/103 (49%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           I   +   S           + + +         F  +L  ++  A+  ++  E  ++  
Sbjct: 2   IPALSLLGSIVGPAAAAVSPSTSVSAAATDGDAGFGHVLAQVSSDAVNSLKTGEATAILG 61

Query: 66  LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           L+GK S+++ V+ +M AE++L+ +IA+RDK +SA   +S+M I
Sbjct: 62  LEGKASVQQVVESVMSAEQSLHTAIAIRDKAVSAYQSISQMAI 104


>gi|149203128|ref|ZP_01880099.1| flagellar hook-basal body complex protein FliE, putative
           [Roseovarius sp. TM1035]
 gi|149143674|gb|EDM31710.1| flagellar hook-basal body complex protein FliE, putative
           [Roseovarius sp. TM1035]
          Length = 96

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 41/96 (42%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           +  T     +         E  +   +  +  Q +AK  +  + + E ++ A++ GK   
Sbjct: 1   MDITGLNTAQKYSAARMATEPAAGHGAAGSAFQTVAKDFVATLSEGETLAKASMIGKADP 60

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              V  + Q E  +  ++ +RD+++ A  E+ +M +
Sbjct: 61  HSLVQALAQTELAVEAAVTVRDRVVEAYQEILRMPV 96


>gi|326319072|ref|YP_004236744.1| flagellar hook-basal body complex subunit FliE [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375908|gb|ADX48177.1| flagellar hook-basal body complex subunit FliE [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 105

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           S  +   T          + E      + FS  L+   +       +A  +         
Sbjct: 6   SSSTAPLTGAGLARRATAAPEAAAGQEVGFSTALKGALQSVSAAQNRASGLQQEVQMENP 65

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +  I +A+     ++ +R++++ A +++  MQ+
Sbjct: 66  AVSLEETMIAIQKAQVGFQATLHVRNRMVQAYTDIMNMQV 105


>gi|120613032|ref|YP_972710.1| flagellar hook-basal body complex subunit FliE [Acidovorax citrulli
           AAC00-1]
 gi|120591496|gb|ABM34936.1| flagellar hook-basal body complex subunit FliE [Acidovorax citrulli
           AAC00-1]
          Length = 105

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           S  +   T          + +  G   + FS  L+   +       +A  +         
Sbjct: 6   SSSTAPLTGAGLARRATAAQDAAGGQEVGFSTALKGALQSVSAAQNRASGLQQEVQMENP 65

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +  I +A+     ++ +R++++ A +++  MQ+
Sbjct: 66  AVSLEETMIAIQKAQVGFQATLHVRNRMVQAYTDIMNMQV 105


>gi|317153717|ref|YP_004121765.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943968|gb|ADU63019.1| flagellar hook-basal body complex subunit FliE [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 109

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHI 79
                  +  ++  +    FS  L+           +   +      G + ++ E +  +
Sbjct: 21  SVDSTVASRLQKPQAPVEGFSNTLKSSLDKVNNMQAEKNLMIEEFASGKRQNVHELMITM 80

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKM 106
            +A   ++++ A+R K+++A  E+ KM
Sbjct: 81  QKAGLAMSMTSAVRAKVMTAYQELMKM 107


>gi|170704246|ref|ZP_02894811.1| flagellar hook-basal body complex protein FliE [Burkholderia
           ambifaria IOP40-10]
 gi|170130843|gb|EDS99605.1| flagellar hook-basal body complex protein FliE [Burkholderia
           ambifaria IOP40-10]
          Length = 67

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQGKTS--MREAVDHIMQAERTLNLSIALRDKILSAVS 101
           ++       GD + A   + A   G  +  + + +  + +A       + +R+K++SA +
Sbjct: 1   MKASLDKISGDQQHALGEAQAFEVGAANVSLNDVMVDMQKANIGFQFGLQVRNKLVSAYN 60

Query: 102 EVSKMQI 108
           ++ +M +
Sbjct: 61  DIMQMSV 67


>gi|315498434|ref|YP_004087238.1| flagellar hook-basal body complex protein flie [Asticcacaulis
           excentricus CB 48]
 gi|315416446|gb|ADU13087.1| flagellar hook-basal body complex protein FliE [Asticcacaulis
           excentricus CB 48]
          Length = 102

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
                  +  +                +FS +L    +  +   + AE+  +A  QGK  
Sbjct: 6   VAKAYGAVQKQVSGLHEEGSRTQDVGAAFSKVLNGAMEQTMKSTQNAESQMIAHSQGKAE 65

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + +AV  +  AE +L   IA+RD+++SA  E+ +M I
Sbjct: 66  LIDAVTAVASAEASLESVIAIRDQVISAYQEILRMPI 102


>gi|304321146|ref|YP_003854789.1| hypothetical protein PB2503_07959 [Parvularcula bermudensis
           HTCC2503]
 gi|303300048|gb|ADM09647.1| hypothetical protein PB2503_07959 [Parvularcula bermudensis
           HTCC2503]
          Length = 96

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQ 81
                        +     +  L+   +      +KA+        G+ S    V+ + +
Sbjct: 10  AATGYGQVLGAKPAPGGDLAENLKAAGEAFTKVFDKADQSVQQMAAGEGSAHAVVEAMAE 69

Query: 82  AERTLNLSIALRDKILSAVSEVSKMQI 108
           AE  L  ++ +RD+++ A  E+ +M +
Sbjct: 70  AEVALQAAVTIRDRVVEAYQEILRMPV 96


>gi|288962708|ref|YP_003453002.1| FliE protein [Azospirillum sp. B510]
 gi|288914974|dbj|BAI76458.1| FliE protein [Azospirillum sp. B510]
          Length = 119

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 47/100 (47%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
             S ++              ++     +   F   L      A+  ++++E VSLAA+ G
Sbjct: 20  IASGVAEAQAATSPLSAAGRTDAVAAGAESDFGGFLDKSISQAVDTLKESERVSLAAVSG 79

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K S ++ V  ++ AE T+   +A+RDK++ A  E+ ++ +
Sbjct: 80  KASAQDVVRSVLAAEMTVQSVVAIRDKMVQAYQEIMRIAV 119


>gi|224373712|ref|YP_002608084.1| flagellar hook-basal body complex protein (FliE) [Nautilia
           profundicola AmH]
 gi|223588538|gb|ACM92274.1| flagellar hook-basal body complex protein (FliE) [Nautilia
           profundicola AmH]
          Length = 96

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 36  SPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRD 94
           +  SF  LL+         M+ AE        GK   + +A   I +AE  + + + +R+
Sbjct: 23  ADGSFEDLLKKELDTTNNMMQNAEKAEADIATGKVEDLAKASITIQKAEMQMKMVLEVRN 82

Query: 95  KILSAVSEVSKMQI 108
           K ++A  E+ K QI
Sbjct: 83  KAINAYKELLKTQI 96


>gi|148261123|ref|YP_001235250.1| flagellar hook-basal body complex protein FliE [Acidiphilium
           cryptum JF-5]
 gi|326404524|ref|YP_004284606.1| flagellar hook-basal body complex protein FliE [Acidiphilium
           multivorum AIU301]
 gi|146402804|gb|ABQ31331.1| flagellar hook-basal body complex protein FliE [Acidiphilium
           cryptum JF-5]
 gi|325051386|dbj|BAJ81724.1| flagellar hook-basal body complex protein FliE [Acidiphilium
           multivorum AIU301]
          Length = 100

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 39/100 (39%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            +  IS              +   G +   SF   + ++   AI      E  + + L G
Sbjct: 1   MSGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMG 60

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           K  +   V  + QA+  L  ++A+RD+++ A   +  M I
Sbjct: 61  KGDLTHVVASVAQAQVALQTTVAIRDRLIQAYQSIMSMPI 100


>gi|88704288|ref|ZP_01102002.1| Flagellar hook-basal body complex protein FliE [Congregibacter
           litoralis KT71]
 gi|88701339|gb|EAQ98444.1| Flagellar hook-basal body complex protein FliE [Congregibacter
           litoralis KT71]
          Length = 105

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
             N  I+   T+         +     +S  +FS+L+QD  +     M +A++++ +   
Sbjct: 5   AINQVIAQMRTMAAAAGSETAAP--DAASGANFSSLMQDSIEEVNASMMEAKSLATSFES 62

Query: 68  G--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G  + S+ E +    +A         +R+K+L+A  E+  MQ+
Sbjct: 63  GDPQISVTEVMVASQRAGLEFQAMTEVRNKLLTAYQEIMSMQV 105


>gi|168334479|ref|ZP_02692650.1| hypothetical protein Epulo_05848 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 102

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEK---AENVSLAALQGK 69
           I   + +G      +  N+       SF   L           E    + N++   + G+
Sbjct: 3   IGRVNMLGYTPKEIREPNKTTAIDDTSFRLSLNAATDLLKATQEAENVSTNLTYDFITGQ 62

Query: 70  T-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + ++ + +    ++   L+ ++ +++KI++A +E+ K+ +
Sbjct: 63  SENIHDLMIAQEKSSTMLSFTMKVQNKIMTAYNEIIKIPV 102


>gi|256376474|ref|YP_003100134.1| flagellar hook-basal body complex protein FliE [Actinosynnema mirum
           DSM 43827]
 gi|255920777|gb|ACU36288.1| flagellar hook-basal body complex protein FliE [Actinosynnema mirum
           DSM 43827]
          Length = 105

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 4/107 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   I       +    +        +S    GS+     +L   +  G      K++++
Sbjct: 1   MTAPIAAIGGSPTPPAVVAPIAATGADSATAAGSAS---GSLFSGVLDGIQQAQAKSDSL 57

Query: 62  SLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           ++ A  G    + + +    +A   + +++A+R+K + A +E+ ++Q
Sbjct: 58  AVQAATGTLGDVHDYLAASTEAGLRVQMTVAIRNKAVEAFNEIMRLQ 104


>gi|241761169|ref|ZP_04759258.1| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|241374788|gb|EER64249.1| flagellar hook-basal body complex subunit FliE [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
          Length = 124

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           N+    T         +   +       +SF+  L +          ++     A  +G+
Sbjct: 25  NAAGLSTSAAQDVGGVSSVVDGSKSGGILSFNDALNEAMSSVNDSYIQSTEAQDAYQKGE 84

Query: 70  T-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           T  +   +    +A      ++ +R++++ A   +  M +
Sbjct: 85  TTDIASVMLSRQKASVAFQATLQMRNRLMDAYKTIMNMSV 124


>gi|170769408|ref|ZP_02903861.1| flagellar hook-basal body complex protein [Escherichia albertii
           TW07627]
 gi|170121732|gb|EDS90663.1| flagellar hook-basal body complex protein [Escherichia albertii
           TW07627]
          Length = 104

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG  S IS      M      + ++      ISF+  L             A   +
Sbjct: 1   MAAIQGIQSVISQLQATAMSARVQASLSQPT----ISFAGQLHAALDRISDTQNAARVQT 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|302338076|ref|YP_003803282.1| flagellar hook-basal body complex subunit FliE [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635261|gb|ADK80688.1| flagellar hook-basal body complex subunit FliE [Spirochaeta
           smaragdinae DSM 11293]
          Length = 112

 Score = 52.7 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 26  TQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAE 83
                 +       F +L++    GA    ++A  ++   +       + +    + +A 
Sbjct: 29  ANEEKVDAPMVGQDFGSLVEKALTGASNQEQEANALAQQFITDPDSVDVHDVTIAMGKAN 88

Query: 84  RTLNLSIALRDKILSAVSEVSKM 106
             ++++ ++ D+ L A  E+  +
Sbjct: 89  MAVSMTKSVVDEALKAYREIINL 111


>gi|56413119|ref|YP_150194.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161613464|ref|YP_001587429.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552801|ref|ZP_02346552.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|168239207|ref|ZP_02664265.1| flagellar hook-basal body complex protein (FliE) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168259746|ref|ZP_02681719.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168823010|ref|ZP_02835010.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194736522|ref|YP_002115001.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197248298|ref|YP_002146056.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197362045|ref|YP_002141682.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243733|ref|YP_002215119.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205352338|ref|YP_002226139.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856519|ref|YP_002243170.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238912459|ref|ZP_04656296.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|81360611|sp|Q5PHZ3|FLIE_SALPA RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|189044495|sp|A9MU40|FLIE_SALPB RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704241|sp|B5F2S0|FLIE_SALA4 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704242|sp|B5FRW4|FLIE_SALDC RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704243|sp|B5R0Z0|FLIE_SALEP RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704244|sp|B5R7G4|FLIE_SALG2 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704247|sp|B5BGA1|FLIE_SALPK RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704248|sp|B4TZJ7|FLIE_SALSV RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|56127376|gb|AAV76882.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|161362828|gb|ABX66596.1| hypothetical protein SPAB_01181 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194712024|gb|ACF91245.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197093522|emb|CAR58983.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197212001|gb|ACH49398.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197288036|gb|EDY27423.1| flagellar hook-basal body complex protein (FliE) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197938249|gb|ACH75582.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205272119|emb|CAR36972.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322648|gb|EDZ10487.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205340665|gb|EDZ27429.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205350945|gb|EDZ37576.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708322|emb|CAR32625.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|320085414|emb|CBY95195.1| Flagellar hook-basal body complex protein fliE [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322616961|gb|EFY13869.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618200|gb|EFY15092.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625871|gb|EFY22690.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626323|gb|EFY23133.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632738|gb|EFY29483.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322639080|gb|EFY35773.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640396|gb|EFY37052.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647243|gb|EFY43742.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649909|gb|EFY46330.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655517|gb|EFY51825.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660295|gb|EFY56533.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662976|gb|EFY59183.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668161|gb|EFY64320.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674080|gb|EFY70174.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675568|gb|EFY71642.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683021|gb|EFY79037.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686715|gb|EFY82693.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195397|gb|EFZ80577.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198075|gb|EFZ83192.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204453|gb|EFZ89459.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207543|gb|EFZ92491.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211018|gb|EFZ95878.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217528|gb|EGA02247.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219603|gb|EGA04087.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225204|gb|EGA09448.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231550|gb|EGA15663.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235993|gb|EGA20072.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240563|gb|EGA24606.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245455|gb|EGA29455.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250225|gb|EGA34117.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253964|gb|EGA37788.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255509|gb|EGA39270.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262106|gb|EGA45669.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266229|gb|EGA49719.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270662|gb|EGA54103.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326622867|gb|EGE29212.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326627388|gb|EGE33731.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 104

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         +    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGVISQLQATAMAARG----QDTHSQSTVSFAGQLHAALDRISDRQTAARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|254420038|ref|ZP_05033762.1| flagellar hook-basal body complex protein (FliE) [Brevundimonas sp.
           BAL3]
 gi|196186215|gb|EDX81191.1| flagellar hook-basal body complex protein (FliE) [Brevundimonas sp.
           BAL3]
          Length = 100

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 43/100 (43%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
            N  ++      ++      + +   S    F+ L+++           AE     ++QG
Sbjct: 1   MNPMMAARAYAAVQGSAMPTAAQPPASGDNGFADLVKNAMTDMTQQSRAAETQMTQSIQG 60

Query: 69  KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++ + V  +  AE +L   +++RD+++SA  E+  M I
Sbjct: 61  NGNLIDVVTALSSAEASLETVMSVRDQVISAYKEIMAMPI 100


>gi|329890581|ref|ZP_08268924.1| flagellar hook-basal body complex protein FliE [Brevundimonas
           diminuta ATCC 11568]
 gi|328845882|gb|EGF95446.1| flagellar hook-basal body complex protein FliE [Brevundimonas
           diminuta ATCC 11568]
          Length = 107

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M   +                      +   G ++   F+ LLQ++          AE  
Sbjct: 1   MNPIMAARAYAAVQGGGGVNVATSANAAASTGPNAAGGFADLLQNVMTQTTQQTRAAETQ 60

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              ++QG+ ++ + V  I  AE +L   +A+RD+++SA  E+ +M I
Sbjct: 61  MAQSVQGQGNLIDVVTAISSAEASLETVMAVRDQVISAYQEIMRMPI 107


>gi|149189865|ref|ZP_01868145.1| putative flagellar hook-basal body complex protein [Vibrio shilonii
           AK1]
 gi|148836351|gb|EDL53308.1| putative flagellar hook-basal body complex protein [Vibrio shilonii
           AK1]
          Length = 118

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERT 85
              +    + P++FS  ++++          A     A   G++  +  A+    +A  +
Sbjct: 36  NPIDVNKVNEPMAFSGAMKNVLDMVNQHQSTASQKITAVETGESDDLVGAMIASQKASLS 95

Query: 86  LNLSIALRDKILSAVSEVSKMQI 108
            +  + +R+K++++  ++ KM +
Sbjct: 96  FSALMQVRNKVVASFEDIMKMPV 118


>gi|332297608|ref|YP_004439530.1| flagellar hook-basal body complex subunit FliE [Treponema
           brennaborense DSM 12168]
 gi|332180711|gb|AEE16399.1| flagellar hook-basal body complex subunit FliE [Treponema
           brennaborense DSM 12168]
          Length = 111

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYD---FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           MI  ++   +  +H  +  +        ++++    ++  +F   L +           +
Sbjct: 1   MIGSLELLRTHAAHIGSAAVVSGRHTAAESASSGTKTAKGTFENYLTEAVDYVNTKQIAS 60

Query: 59  ENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
            +     +       + +    + +A  +LNL+  + D+++S  +E+
Sbjct: 61  SSNVEKLITDPDSVDIHDVTIAMAEASMSLNLAQTVIDRLISGWNEI 107


>gi|126463749|ref|YP_001044863.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
           ATCC 17029]
 gi|332559805|ref|ZP_08414127.1| FliE2 [Rhodobacter sphaeroides WS8N]
 gi|126105413|gb|ABN78091.1| putative flagellar hook-basal body complex protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332277517|gb|EGJ22832.1| FliE2 [Rhodobacter sphaeroides WS8N]
          Length = 96

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 39/91 (42%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
           +I  +      +        +  +A  +  A+     + + E  + AA+ GK      V+
Sbjct: 6   SIAAQSYAKARTAAAPDQPSVGLTAAFERAAESFTQTLAQGEETARAAMTGKADPHALVE 65

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  ++  +  ++ LRDK++ A  E+ +M +
Sbjct: 66  ALAASQMAVETAVTLRDKVVEAYQEILRMPV 96


>gi|296274008|ref|YP_003656639.1| flagellar hook-basal body complex subunit FliE [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098182|gb|ADG94132.1| flagellar hook-basal body complex subunit FliE [Arcobacter
           nitrofigilis DSM 7299]
          Length = 100

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 10/109 (9%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I  I G +S                    E  +   SF+++L++              
Sbjct: 1   MDISGINGISS---------AFTKNNVQKTNENENQGESFASMLKNAVNEVNNTQVDGYK 51

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                  GK  +++EAV  I +AE TL L++ +++K ++   +V  MQ+
Sbjct: 52  AMENIATGKVENLQEAVSKIEEAEMTLKLALEVKNKAMAGFKQVMSMQV 100


>gi|329849686|ref|ZP_08264532.1| flagellar hook-basal body complex protein FliE family protein
           [Asticcacaulis biprosthecum C19]
 gi|328841597|gb|EGF91167.1| flagellar hook-basal body complex protein FliE family protein
           [Asticcacaulis biprosthecum C19]
          Length = 103

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 40/88 (45%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIM 80
            + +   +           F  +LQ   +  +   + AE++ +    G+  + +AV  + 
Sbjct: 16  KQANTLGDGGGGEAVQAPDFGKILQGAMEQTMKSTQTAEHMMVQQQAGQAELIDAVTAVS 75

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
            AE  L   IA+RD+++SA  E+ +M I
Sbjct: 76  SAELQLQSVIAIRDQVISAYQEIMRMPI 103


>gi|319406975|emb|CBI80612.1| Flagellar hook-basal body complex protein fliE [Bartonella sp.
           1-1C]
          Length = 112

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGT--NSFISHTDTIGMRYDFTQNSNEEGGSSP--ISFSALLQDMAKGAIGDMEK 57
           MIE       ++ +        +                 +SF  +L ++ +     ++ 
Sbjct: 1   MIEAFTSVVSHNTLDSLGQASKQMSSLNGQQILPSVVGNNVSFDQVLSEVVEVVGTKLQT 60

Query: 58  AENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE++S+  + G    +RE V+ +M+AER+L+ +IALRDK++ A  EVS+MQI
Sbjct: 61  AESLSIDRISGSDVGVREVVNSVMEAERSLSTAIALRDKLVQAYLEVSRMQI 112


>gi|168462492|ref|ZP_02696423.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195633975|gb|EDX52327.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 104

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         E    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGVISQLQATAMAARG----QETHSQSTVSFAGQLHAALDRISDRQTAARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKATVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|188534119|ref|YP_001907916.1| Flagellar hook-basal body complex protein FliE [Erwinia
           tasmaniensis Et1/99]
 gi|226704231|sp|B2VDN8|FLIE_ERWT9 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|188029161|emb|CAO97033.1| Flagellar hook-basal body complex protein FliE [Erwinia
           tasmaniensis Et1/99]
          Length = 103

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQG  S +    T  ++   ++       +S   F A ++            A + + 
Sbjct: 1   MAIQGIESVMQAMQTAALQASGSK----TDDASSADFGAEMKAALNKISETQTAARSQAQ 56

Query: 64  AALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK   S+ + +  + ++  ++ + I +R+K++SA S++  MQ+
Sbjct: 57  AFEMGKEGVSLNDVMVDLQKSSVSMQMGIQVRNKLVSAYSDIMNMQV 103


>gi|77464907|ref|YP_354411.1| flagellar hook-basal body protein FliE [Rhodobacter sphaeroides
           2.4.1]
 gi|77389325|gb|ABA80510.1| putative flagellar hook-basal body complex protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 96

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 38/91 (41%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVD 77
           +   +      +        +  +A  +  A+     + + E  + AA+ GK      V+
Sbjct: 6   STAAQSYAKARTAAAPDQPSVGLTAAFERAAESFTQTLAQGEETARAAMTGKADPHALVE 65

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  ++  +  ++ LRDK++ A  E+ +M +
Sbjct: 66  ALAASQMAVETAVTLRDKVVEAYQEILRMPV 96


>gi|16760912|ref|NP_456529.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141396|ref|NP_804738.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213053156|ref|ZP_03346034.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213419966|ref|ZP_03353032.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213425007|ref|ZP_03357757.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213583550|ref|ZP_03365376.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213622938|ref|ZP_03375721.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646789|ref|ZP_03376842.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289829460|ref|ZP_06547072.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|38503117|sp|Q8Z5S1|FLIE_SALTI RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|25332229|pir||AI0751 flagellar hook-basal body complex protein FliE [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503209|emb|CAD05716.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137023|gb|AAO68587.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 104

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M      N  E    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGGISQLQATAMAA----NGQETHSQSTVSFAGQLHAALDRISDRQTAARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|91223210|ref|ZP_01258476.1| putative flagellar hook-basal body complex protein [Vibrio
           alginolyticus 12G01]
 gi|254228799|ref|ZP_04922222.1| flagellar hook-basal body complex protein (FliE) [Vibrio sp. Ex25]
 gi|262396482|ref|YP_003288335.1| flagellar hook-basal body complex protein FliE [Vibrio sp. Ex25]
 gi|269965410|ref|ZP_06179530.1| lateral flagellar FliE-like hook basal body protein [Vibrio
           alginolyticus 40B]
 gi|91192023|gb|EAS78286.1| putative flagellar hook-basal body complex protein [Vibrio
           alginolyticus 12G01]
 gi|151938746|gb|EDN57581.1| flagellar hook-basal body complex protein (FliE) [Vibrio sp. Ex25]
 gi|262340076|gb|ACY53870.1| flagellar hook-basal body complex protein FliE [Vibrio sp. Ex25]
 gi|269830056|gb|EEZ84285.1| lateral flagellar FliE-like hook basal body protein [Vibrio
           alginolyticus 40B]
          Length = 118

 Score = 52.3 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M+ ++Q   + +   + I          +++  ++P+SFS  + ++          A  
Sbjct: 14  LMLSKMQAMQAQVQPPEFI----VSANPLDQQSLNAPLSFSQAMTNVLDTVNQHQSVASQ 69

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   GK+  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 70  KMTAVETGKSDDLVGAMVASQKASLSFNALMQVRNKVVTSFEDIMKMPV 118


>gi|323493121|ref|ZP_08098252.1| flagellar hook-basal body protein [Vibrio brasiliensis LMG 20546]
 gi|323312592|gb|EGA65725.1| flagellar hook-basal body protein [Vibrio brasiliensis LMG 20546]
          Length = 118

 Score = 51.9 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                + +  +SP+SFS  +  +          A     A   G++  +  A+    +A 
Sbjct: 34  SANPLDVQKVNSPMSFSTAMTSVLDSVNQHQSLASQKMTAVETGQSDDLVGAMIASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++++  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVTSFEDIMKMPV 118


>gi|320107021|ref|YP_004182611.1| flagellar hook-basal body complex subunit FliE [Terriglobus
           saanensis SP1PR4]
 gi|319925542|gb|ADV82617.1| flagellar hook-basal body complex subunit FliE [Terriglobus
           saanensis SP1PR4]
          Length = 105

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 6   IQGTNSFISHTDTIGM-RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLA 64
           + G  + +S   T  + +     ++   G +    FS + +   +       KA      
Sbjct: 1   MTGIQAIVSQIATQAVEQQQLAASATGAGPADSGGFSEIFRSAMRQTEELDAKAAKSVTG 60

Query: 65  ALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
            L G    + EA+    +AE    L++ +R+K +SA  ++ +MQ
Sbjct: 61  LLSGDGVEVHEAMIATQKAEMAFELALQVRNKAISAYQQMMQMQ 104


>gi|149908771|ref|ZP_01897432.1| Hypothetical FliE-like hook basal body protein [Moritella sp. PE36]
 gi|149808313|gb|EDM68252.1| Hypothetical FliE-like hook basal body protein [Moritella sp. PE36]
          Length = 109

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 49/109 (44%), Gaps = 1/109 (0%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M IE    + + ++  + + ++      SN  G +  +SF+  ++ M         KA  
Sbjct: 1   MKIEANTQSINLMNKMELMKLQAGNEIASNPLGTNQAVSFNQTMKMMVSDINQQQLKANG 60

Query: 61  VSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A   G++  +  A+    +A  + ++ + +R+K+++    + ++ +
Sbjct: 61  MMSAVDSGRSDDLVGAMVMAKKAGLSFSVLMQVRNKLMTGFDNIMRIPL 109


>gi|62180542|ref|YP_216959.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|168234140|ref|ZP_02659198.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194445746|ref|YP_002041232.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194469957|ref|ZP_03075941.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|224583533|ref|YP_002637331.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|75482690|sp|Q57N33|FLIE_SALCH RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704246|sp|B4SW74|FLIE_SALNS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|254789312|sp|C0Q287|FLIE_SALPC RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|62128175|gb|AAX65878.1| putative Flagellar hook-basal body protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|194404409|gb|ACF64631.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194456321|gb|EDX45160.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|205331853|gb|EDZ18617.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|224468060|gb|ACN45890.1| flagellar basal body protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322715018|gb|EFZ06589.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 104

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         E    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGVISQLQATAMAASG----QETHSQSTVSFAGQLHAALDRISDRQTAARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|332669189|ref|YP_004452197.1| flagellar hook-basal body complex subunit FliE [Cellulomonas fimi
           ATCC 484]
 gi|332338227|gb|AEE44810.1| flagellar hook-basal body complex subunit FliE [Cellulomonas fimi
           ATCC 484]
          Length = 102

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 24  DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQA 82
                +     ++   F+++L    +        +  +++ A+ G    + +      QA
Sbjct: 18  GAALPTQAADPAAGAQFASVLG-AVENLQQMQSTSNELAVRAVTGDLDDVHDYTIASAQA 76

Query: 83  ERTLNLSIALRDKILSAVSEVSKMQ 107
              L L+ A+R+K + A +E+ +MQ
Sbjct: 77  STALELTAAVRNKAVDAFTEIMRMQ 101


>gi|16765306|ref|NP_460921.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167993542|ref|ZP_02574636.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168244818|ref|ZP_02669750.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194450605|ref|YP_002046018.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197263208|ref|ZP_03163282.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200390337|ref|ZP_03216948.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|120323|sp|P26462|FLIE_SALTY RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704245|sp|B4T8S2|FLIE_SALHS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|154021|gb|AAA27095.1| flagellar protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420503|gb|AAL20880.1| putative flagellar hook-basal body protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|194408909|gb|ACF69128.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197241463|gb|EDY24083.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199602782|gb|EDZ01328.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205328377|gb|EDZ15141.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205336347|gb|EDZ23111.1| flagellar hook-basal body complex protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|261247134|emb|CBG24957.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993956|gb|ACY88841.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158482|emb|CBW17992.1| flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912958|dbj|BAJ36932.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224612|gb|EFX49675.1| Flagellar hook-basal body complex protein FliE [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130246|gb|ADX17676.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988857|gb|AEF07840.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 104

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  IQG    IS      M         +    S +SF+  L             A   +
Sbjct: 1   MAAIQGIEGVISQLQATAMAARG----QDTHSQSTVSFAGQLHAALDRISDRQAAARVQA 56

Query: 63  LAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                G+   ++ + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 57  EKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 104


>gi|319403960|emb|CBI77548.1| Flagellar hook-basal body complex protein fliE [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 112

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   MIEQIQGTNS--FISHTDTIGMRYDFTQNSNEEGGSSP--ISFSALLQDMAKGAIGDMEK 57
           MIE      S   +        +           G     +SF  +L ++ +     ++ 
Sbjct: 1   MIEAFTSVVSHNTLDSLGQASKQMSSLNGQQILSGVVGNNVSFDQVLSEVVEVVGTKLQT 60

Query: 58  AENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           AE++S+  + G    +RE V+ +M+AER+L+ +IALRDK++ A  EVS+MQI
Sbjct: 61  AESLSIDRISGSDVGVREVVNSVMEAERSLSTAIALRDKLVQAYLEVSRMQI 112


>gi|260438809|ref|ZP_05792625.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
           crossotus DSM 2876]
 gi|292808798|gb|EFF68003.1| flagellar hook-basal body complex protein FliE [Butyrivibrio
           crossotus DSM 2876]
          Length = 107

 Score = 51.9 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAK---GAIGDMEKAENVS 62
           +   +S  + T         +  S         +F  +              +  A+   
Sbjct: 1   MSDISSLFNITSDSIKNIVNSGTSGIGKSGDSSAFDGIYNAAVNMITETNDYIHDAQQAE 60

Query: 63  LAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +    GK TS  E      +A  +L  ++A+++++LSA  E+  +QI
Sbjct: 61  VDFATGKLTSTHELAVIEQKANLSLQYTVAVKNQLLSAYKEIMNIQI 107


>gi|304414644|ref|ZP_07395720.1| flagellar hook-basal body complex protein [Candidatus Regiella
           insecticola LSR1]
 gi|304283182|gb|EFL91590.1| flagellar hook-basal body complex protein [Candidatus Regiella
           insecticola LSR1]
          Length = 142

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 38  ISFSALLQDMAKGAIGDMEKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKI 96
            SF ++L++           A     A   G    +   +    +A    + +  + +K+
Sbjct: 71  GSFLSVLEEAIDSVDALQHVASQKQEAIDMGLSDDLTGTMIANEKASIAFSATHKVSEKL 130

Query: 97  LSAVSEVSKMQI 108
           L+A++E     +
Sbjct: 131 LTAITETMNTSL 142


>gi|124265757|ref|YP_001019761.1| flagellar hook-basal body protein [Methylibium petroleiphilum PM1]
 gi|124258532|gb|ABM93526.1| flagellar hook-basal body protein [Methylibium petroleiphilum PM1]
          Length = 110

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           +  +    +    +  + + +  G  P SF        K       +A  +      G  
Sbjct: 11  AQAAARAGMPQVAERVRLATQSQGVEPASFQTSFSAALKSVSSAQNQATELQKQVQLGNS 70

Query: 70  -TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S+ E +  + +A+     ++ +R+K++ A +++  M +
Sbjct: 71  SVSLEETMVAMQKAQIGFQATLQVRNKLVQAYTDIMNMAM 110


>gi|304392507|ref|ZP_07374447.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
           R2A130]
 gi|303295137|gb|EFL89497.1| flagellar hook-basal body complex protein FliE [Ahrensia sp.
           R2A130]
          Length = 103

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+ I  T +    +                   + ISF+ +L   A+     +  AE +
Sbjct: 1   MIDPISATAA----SSAGQTAATALAKPPVTNAPTGISFAEMLGSQAQNLSNGLHGAEAI 56

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +   + G+T +R+  D +M+AER++  ++ +RDKI++A  ++S+M I
Sbjct: 57  AAQGMTGETGIRQVADAVMEAERSMQAAVVVRDKIVAAWLDISRMAI 103


>gi|312884806|ref|ZP_07744498.1| flagellar hook-basal body complex protein FliE [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367458|gb|EFP95018.1| flagellar hook-basal body complex protein FliE [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 118

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MM+ ++    S +     I  +    Q         P+SFS  L  +          A  
Sbjct: 15  MMLSKMAAMQSKVQPEYVIRPQLMQGQLM-----VQPMSFSTTLNRVLNVVNRHQAVASK 69

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A  + +  + +R+K++++  +V KM +
Sbjct: 70  KMTAVELGESDDLVGAMIASQKASLSFDGLMHVRNKLVTSFEDVMKMPV 118


>gi|313905126|ref|ZP_07838495.1| flagellar hook-basal body complex subunit FliE [Eubacterium
           cellulosolvens 6]
 gi|313470029|gb|EFR65362.1| flagellar hook-basal body complex subunit FliE [Eubacterium
           cellulosolvens 6]
          Length = 117

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 40  FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILS 98
           F  + Q   +         EN       G+            +A+ +L++ I+LR+K L 
Sbjct: 48  FQNVFQTAVEQVKETQADVENKQYLLSTGQLEDAHTLPIAETKAQISLDMMISLRNKALE 107

Query: 99  AVSEVSKMQI 108
           + +E+ KM I
Sbjct: 108 SYNELIKMNI 117


>gi|121601933|ref|YP_989401.1| flagellar hook-basal body complex protein FliE [Bartonella
           bacilliformis KC583]
 gi|120614110|gb|ABM44711.1| flagellar hook-basal body complex protein FliE [Bartonella
           bacilliformis KC583]
          Length = 110

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNE--EGGSSPISFSALLQDMAKGAIGDMEKAE 59
           MI  +       +     G   +   N       G++  SF  +L  + +     ++KAE
Sbjct: 1   MIGALTSIAMRANSLGPEGGLMNSINNRQNILSEGANTASFDQVLAKITESVGTKLQKAE 60

Query: 60  NVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++S+  + G    +RE V  +M+AE++L+ +IALRDK++ A  EVS+MQI
Sbjct: 61  SLSMGKISGNDIGVREIVSSVMEAEQSLSTAIALRDKMVQAYLEVSRMQI 110


>gi|328947993|ref|YP_004365330.1| flagellar hook-basal body complex subunit FliE [Treponema
           succinifaciens DSM 2489]
 gi|328448317|gb|AEB14033.1| flagellar hook-basal body complex subunit FliE [Treponema
           succinifaciens DSM 2489]
          Length = 116

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 40/107 (37%), Gaps = 2/107 (1%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M + +   ++   S    +    +  +N++  G     SF   L +              
Sbjct: 8   MELNRSNASHLGTSAIGNVSKALNGKENASVNGAEKKESFRTYLLEAVNEMNSQQLNVSA 67

Query: 61  VSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSK 105
           +    +       + +    + +A+ +L+L+  + D+++   +E+S+
Sbjct: 68  LQEKVITDPDSVDIHDVTTAMAKAQMSLDLAQNVIDRLVKGWNELSQ 114


>gi|121608097|ref|YP_995904.1| flagellar hook-basal body complex subunit FliE [Verminephrobacter
           eiseniae EF01-2]
 gi|121552737|gb|ABM56886.1| flagellar hook-basal body complex subunit FliE [Verminephrobacter
           eiseniae EF01-2]
          Length = 107

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSP-ISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
           S  +   + G+        +          F    +   +       ++ ++        
Sbjct: 7   SLATPLTSAGLARRAAAPQDASQAVGQEAGFPGAFKTALQSVSAAQSRSADLQKQVQLED 66

Query: 70  --TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              S+ E +  I +A+     ++ +R++++ A +++  MQ+
Sbjct: 67  PAVSLEETMVAIQKAQIGFQAALNVRNRMVQAYTDIMNMQV 107


>gi|291558198|emb|CBL35315.1| flagellar hook-basal body complex protein FliE [Eubacterium siraeum
           V10Sc8a]
          Length = 101

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
             +   E       +F  + + + K       + +  S+  + G    + +   ++ +A 
Sbjct: 17  SQKKQTESTDDGEATFFDVFESLVKNVKETDAQVQKDSVDLMLGDVDDLAQIQVNLEKAA 76

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
             ++L + +++K + A +E+ +M +
Sbjct: 77  TAVDLLVTVKNKAVDAYNEIMRMTV 101


>gi|126734104|ref|ZP_01749851.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. CCS2]
 gi|126716970|gb|EBA13834.1| flagellar hook-basal body complex protein FliE, putative
           [Roseobacter sp. CCS2]
          Length = 93

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 36/93 (38%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
            D   +       S           S+     A   +  ++ +EN ++ A+         
Sbjct: 1   MDISALVAQNYAASKTATAPDAGGASSAFGTAANSFMTTLQASENTAMQAMTSGADPHAL 60

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           V+ + Q E  +  ++ +RD+++ A  E+ +M +
Sbjct: 61  VEALAQTELAVQTAVTVRDRVVEAYQEILRMPV 93


>gi|225871926|ref|YP_002753380.1| flagellar hook-basal body complex protein FliE [Acidobacterium
           capsulatum ATCC 51196]
 gi|225792027|gb|ACO32117.1| flagellar hook-basal body complex protein FliE [Acidobacterium
           capsulatum ATCC 51196]
          Length = 103

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           + I+   T    +  +  S   GG+SP  F+  L+          ++A   +   L G  
Sbjct: 5   AAIAQAVTGQDSHMLSSLSGVGGGASPAPFAGFLKGALTSMNALEQRASTATQGLLMGTG 64

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
             + +A+    +A+     ++A+  K +SA  +V  +Q
Sbjct: 65  VDVSQAMIATQKADTAFEFALAVHSKAVSAYQQVMNLQ 102


>gi|218133659|ref|ZP_03462463.1| hypothetical protein BACPEC_01528 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991034|gb|EEC57040.1| hypothetical protein BACPEC_01528 [Bacteroides pectinophilus ATCC
           43243]
          Length = 109

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMA---KGAIGDMEKAEN 60
             +      +       +       S+ +  +   +F ++   +          ++ A  
Sbjct: 1   MDVYSATQALGSDYIDKVTNAVKSASSNQAATDKDTFDSVYNSVVGLLNDTNKYIQDASQ 60

Query: 61  VSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +    G  TS  E   +  +A   L  ++A+RDK L A  E+  M +
Sbjct: 61  AEIDFSLGNLTSTHELSVYQQKANLALQYTVAIRDKALEAYKEIMNMSM 109


>gi|298345989|ref|YP_003718676.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           ATCC 43063]
 gi|298236050|gb|ADI67182.1| flagellar hook-basal body complex subunit FliE [Mobiluncus curtisii
           ATCC 43063]
          Length = 128

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKT-S 71
            + +         T    +    +  SF  +  D           A+ + + AL G+   
Sbjct: 32  TNASSVAPTGTGLTPQGGDVRDVAETSFGNIFADAVYNMQQRESTAKKLGVQALTGQLND 91

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
           + +      +++ T+ L+  +R+K +   +E+ +MQ
Sbjct: 92  VHQYTIAAAESQLTMELTSTIRNKAVDMFNEIMRMQ 127


>gi|238796931|ref|ZP_04640435.1| Flagellar hook-basal body protein [Yersinia mollaretii ATCC 43969]
 gi|238719191|gb|EEQ11003.1| Flagellar hook-basal body protein [Yersinia mollaretii ATCC 43969]
          Length = 68

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 43  LLQDMAKGAIGDMEKAENVSLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAV 100
           +L +          +A++ S   + G     + + +  + ++   LNL + +R+K++SA 
Sbjct: 1   MLFNSVNSINAMQTQAKSQSQDYMTGTPGIGLNDVMVSMQKSSLALNLGVQVRNKLVSAY 60

Query: 101 SEVSKMQI 108
            EV  M +
Sbjct: 61  QEVMNMSV 68


>gi|148980293|ref|ZP_01815980.1| putative flagellar hook-basal body complex protein [Vibrionales
           bacterium SWAT-3]
 gi|145961312|gb|EDK26622.1| putative flagellar hook-basal body complex protein [Vibrionales
           bacterium SWAT-3]
          Length = 124

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 3/104 (2%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPIS--FSALLQDMAKGAIGDMEKAENVSLAA 65
            +N F +   T  M    T ++      S  S  FS  L+ +          A     A 
Sbjct: 21  ASNPFSNQAVTGNMVRGITHDNLAVNPVSNNSLAFSNTLKSVLDTVDRYQSHASEKITAV 80

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             GK+  +  A     +A+ + N  + +R+K++S   ++ KM I
Sbjct: 81  ELGKSDDLLGATVASQKAQLSFNALMQVRNKMVSNFQDIIKMPI 124


>gi|254510262|ref|ZP_05122329.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodobacteraceae bacterium KLH11]
 gi|221533973|gb|EEE36961.1| flagellar hook-basal body complex protein FliE, putative
           [Rhodobacteraceae bacterium KLH11]
          Length = 69

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 34/68 (50%)

Query: 41  SALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAV 100
           +  ++   +     ++ +E V+ +++ G+      V  + Q E  +  ++ +R+K++ A 
Sbjct: 2   AQGMRSTFQDFAATLKHSEQVAQSSMVGQADPHALVQALAQTELAVETAVIVRNKVVEAY 61

Query: 101 SEVSKMQI 108
            E+ +M +
Sbjct: 62  QEILRMPV 69


>gi|225375316|ref|ZP_03752537.1| hypothetical protein ROSEINA2194_00941 [Roseburia inulinivorans DSM
           16841]
 gi|225212805|gb|EEG95159.1| hypothetical protein ROSEINA2194_00941 [Roseburia inulinivorans DSM
           16841]
          Length = 103

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 34  GSSPISFSALLQDMAKGA---IGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLS 89
            +   SFS++L                A++  +    G++ +  +      +A   +  +
Sbjct: 25  TTDDDSFSSVLSSAMNMVSETNNLQNNAQSEVIRFALGQSENTHDLSTAQTKALTAIQYT 84

Query: 90  IALRDKILSAVSEVSKMQI 108
           +A+RDK++ A  E+  MQI
Sbjct: 85  VAVRDKMIDAYKEIMNMQI 103


>gi|167645333|ref|YP_001682996.1| flagellar hook-basal body protein FliE [Caulobacter sp. K31]
 gi|167347763|gb|ABZ70498.1| flagellar hook-basal body complex subunit FliE [Caulobacter sp.
           K31]
          Length = 102

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
                             + F A+L+      +     AE        GK  + + V  I
Sbjct: 14  QGSMAAPSLGGVGEAKKGMDFGAMLKSAMTDTLHQTRAAETKMAQQASGKAELIDVVTAI 73

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
             AE +L+  +A+RD+++SA  E+ +M I
Sbjct: 74  SSAEASLDTVMAVRDQVISAYQEIMRMPI 102


>gi|228964728|ref|ZP_04125835.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|229096231|ref|ZP_04227204.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-29]
 gi|228687191|gb|EEL41096.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-29]
 gi|228794978|gb|EEM42477.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 94

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      ++E   +    F  LL    +        A+      L  G     + +  
Sbjct: 9   AIQSIGAPKTSETSVAPGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|153831739|ref|ZP_01984406.1| flagellar hook-basal body complex protein (FliE) [Vibrio harveyi
           HY01]
 gi|148872249|gb|EDL71066.1| flagellar hook-basal body complex protein (FliE) [Vibrio harveyi
           HY01]
          Length = 118

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                +++  ++P+SFS  + ++          A     A   G +  +  A+    +A 
Sbjct: 34  NANPLDQQSLNAPLSFSQAMTNVLDTVNQHQSVASQKMTAVETGASDDLVGAMIASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++ +  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVMSFEDIMKMPV 118


>gi|229017033|ref|ZP_04173953.1| Flagellar hook-basal body complex [Bacillus cereus AH1273]
 gi|229023214|ref|ZP_04179725.1| Flagellar hook-basal body complex [Bacillus cereus AH1272]
 gi|228738139|gb|EEL88624.1| Flagellar hook-basal body complex [Bacillus cereus AH1272]
 gi|228744304|gb|EEL94386.1| Flagellar hook-basal body complex [Bacillus cereus AH1273]
          Length = 99

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPLLNTQPFGAIQPIGAPKTSQTSVVEGRKFIDLL----EDMNKQQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|170748108|ref|YP_001754368.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654630|gb|ACB23685.1| flagellar hook-basal body complex protein FliE [Methylobacterium
           radiotolerans JCM 2831]
          Length = 110

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 2   MIEQIQGTNSFISHTDTIGMRY---DFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKA 58
           MI+ +    S        G                 ++   F  LL  +A      ++  
Sbjct: 1   MIQSLAALASTSDKNAVFGASEFGLAMPGIRQTSPAAAASGFGDLLMQIAGQMRDTVKTG 60

Query: 59  ENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           E  +++ +QGK S +  V+ +M AE++L  ++A+RDK+++A  E+ +M I
Sbjct: 61  EAAAISGIQGKASTQAVVEAVMSAEQSLQTAVAIRDKVVAAYLEIVRMAI 110


>gi|156976201|ref|YP_001447107.1| flagellar hook-basal body protein [Vibrio harveyi ATCC BAA-1116]
 gi|156527795|gb|ABU72880.1| hypothetical protein VIBHAR_04972 [Vibrio harveyi ATCC BAA-1116]
          Length = 118

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                +++  ++P+SFS  + ++          A     A   G +  +  A+    +A 
Sbjct: 34  SANPLDQQTLNAPLSFSQAMTNVLDTVNQHQSVASQKMTAVETGASDDLVGAMIASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++ +  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVMSFEDIMKMPV 118


>gi|228952125|ref|ZP_04114220.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807657|gb|EEM54181.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 94

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      +++        F  LL    +        A+      L  G     + +  
Sbjct: 9   AIQSIGAPKTSQTPVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|126443018|ref|YP_001061228.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 668]
 gi|134280849|ref|ZP_01767559.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 305]
 gi|167725911|ref|ZP_02409147.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei DM98]
 gi|167905071|ref|ZP_02492276.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei NCTC 13177]
 gi|254182910|ref|ZP_04889503.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1655]
 gi|254299705|ref|ZP_04967154.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 406e]
 gi|125657200|gb|ABN48688.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei]
 gi|126222509|gb|ABN86014.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 668]
 gi|134247871|gb|EBA47955.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 305]
 gi|157809601|gb|EDO86771.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 406e]
 gi|184213444|gb|EDU10487.1| flagellar hook-basal body complex protein FliE [Burkholderia
           pseudomallei 1655]
          Length = 110

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 4/110 (3%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSN---EEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           +E IQ  +S +            + +     + GGS  ++F+ +L  M K        A 
Sbjct: 1   MESIQQVSSQLRGRMAELAGQAASLSGAIVGQSGGSGEVNFTHMLGSMLKEVDDRQLDAA 60

Query: 60  NVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++A   G++  +  AV    +A  + ++   +R+K+ +A+ ++ KMQI
Sbjct: 61  EKAVAVDSGRSDDVIGAVLSSQEASLSFSMLTQVRNKLSTALDDLLKMQI 110


>gi|167750731|ref|ZP_02422858.1| hypothetical protein EUBSIR_01709 [Eubacterium siraeum DSM 15702]
 gi|167656410|gb|EDS00540.1| hypothetical protein EUBSIR_01709 [Eubacterium siraeum DSM 15702]
          Length = 101

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 37/89 (41%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHI 79
           M     +   E       +F  + + + K       + +  S+  + G    + +   ++
Sbjct: 13  METMSQKKQTESTDDGEATFFDVFESLVKNVKETDAQVQKDSIDLMLGDVDDLAQIQVNL 72

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A   ++L + +++K + A +E+ +M +
Sbjct: 73  EKAATAVDLLVTVKNKAVDAYNEIMRMTV 101


>gi|163758014|ref|ZP_02165102.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
           DFL-43]
 gi|162284303|gb|EDQ34586.1| flagellar hook-basal body protein FliE [Hoeflea phototrophica
           DFL-43]
          Length = 114

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNSFISHTDT-------IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGD 54
           MI+ I G  +      +               Q  +  G  S  SFS ++Q +  GA+ +
Sbjct: 1   MIDVITGAGATSRLAGSRETDVASSAAMPQMPQMPSAMGPQSSGSFSEVMQSLGVGAMNN 60

Query: 55  MEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++ AE  SLAA++G+   R+ VD +M  ER+L  + A+RDK+++A  E+++MQI
Sbjct: 61  LKAAEAQSLAAVRGEAVTRDVVDAVMAGERSLQTATAIRDKLVTAYLEIARMQI 114


>gi|149928163|ref|ZP_01916409.1| Flagellar hook-basal body protein [Limnobacter sp. MED105]
 gi|149823148|gb|EDM82386.1| Flagellar hook-basal body protein [Limnobacter sp. MED105]
          Length = 107

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI+++   +  +S   T  ++     +  +       SF+  +    + A    +KA ++
Sbjct: 1   MIDKMGAVSGLLSSAVTDAIKSPSLTSKPQAL--DQASFADAIAKALESASLSADKAADL 58

Query: 62  SLAALQGK--TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                      S+ E V  +  +       +  R+KIL A +++  M +
Sbjct: 59  GKRLQMDDPTASVEETVIAMNTSSLQFTAVVQARNKILQAYNDIMNMPV 107


>gi|229029425|ref|ZP_04185508.1| Flagellar hook-basal body complex [Bacillus cereus AH1271]
 gi|228731884|gb|EEL82783.1| Flagellar hook-basal body complex [Bacillus cereus AH1271]
          Length = 94

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            ++      ++      ++E        F  LL    +        A+      L  G  
Sbjct: 1   MLNTQPFGAIQSIGAPKTSETPVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVG 56

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 57  ETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|167576643|ref|ZP_02369517.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           thailandensis TXDOH]
          Length = 110

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 3   IEQIQGTNSFISHTDTI---GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           +E IQ  +S +               +    + G +   +F+ +L  M K        A 
Sbjct: 1   MESIQQVSSQLRGLMAELAGQASSLSSTIMGQPGRAGDANFTHVLGSMLKEVDNRQLDAA 60

Query: 60  NVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++A   G++  +  AV    +A  + ++   +R+K+ +A+ ++ KMQI
Sbjct: 61  EKAVAVDSGRSDDVIGAVLSSQEASLSFSMLTQVRNKLSTALDDLLKMQI 110


>gi|229102344|ref|ZP_04233052.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-28]
 gi|229115186|ref|ZP_04244596.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-3]
 gi|228668326|gb|EEL23758.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-3]
 gi|228680991|gb|EEL35160.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-28]
          Length = 99

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      ++E   +    F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKTSETSVAPGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|167574617|ref|ZP_02367491.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           oklahomensis C6786]
          Length = 110

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDH 78
                    +     +  ++F+++              +         G++  +  A+  
Sbjct: 21  QASAAVLPAAERGRVADDVNFASVFSRAVDDVDSKQTFSAEKMSDVDSGRSDDLIGAMLA 80

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +A  + ++   +R+K+ +A+ ++ KMQI
Sbjct: 81  SQEASLSFSMLTQVRNKLTAAMDDLLKMQI 110


>gi|296531768|ref|ZP_06894590.1| possible flagellar hook-basal body complex protein FliE [Roseomonas
           cervicalis ATCC 49957]
 gi|296267907|gb|EFH13712.1| possible flagellar hook-basal body complex protein FliE [Roseomonas
           cervicalis ATCC 49957]
          Length = 96

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           +               +     S    FS ++ D A+ ++  + +AE  S   + G   +
Sbjct: 1   MPSQLAAIPPVSAALRAYGATASPAGDFSTMVGDAARASLQTLRQAELASARGVAGTADV 60

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +E V     AE T+     LRDKI++A  +V +M +
Sbjct: 61  QEVVQAAANAELTVQTMTQLRDKIVTAYMDVLRMAV 96


>gi|255594467|ref|XP_002536097.1| conserved hypothetical protein [Ricinus communis]
 gi|223520884|gb|EEF26285.1| conserved hypothetical protein [Ricinus communis]
          Length = 121

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           +    +  +   ++    +    +    G+   SF+  +++       D + A       
Sbjct: 19  LAALTNDANRLASVAPAANAGHPALG-NGTGDFSFAQSMKNALVSVDQDQQVANQKMADV 77

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             GK+  +  A+    QA  + ++ + +R+K++ AV E+ K+ +
Sbjct: 78  DSGKSDDLVGAMLSSQQANLSFSMLMQVRNKVMGAVDELLKLPV 121


>gi|291532065|emb|CBK97650.1| flagellar hook-basal body complex protein FliE [Eubacterium siraeum
           70/3]
          Length = 101

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 37/89 (41%), Gaps = 1/89 (1%)

Query: 21  MRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHI 79
           M     +   E       +F  + + + K       + +  S+  + G    + +   ++
Sbjct: 13  METMSQKKQTESTDDGEATFFDVFESLVKNVKETDAQVQKDSVDLMLGDVDDLAQIQVNL 72

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +A   ++L + +++K + A +E+ +M +
Sbjct: 73  EKAATAVDLLVTVKNKAVDAYNEIMRMTV 101


>gi|310816828|ref|YP_003964792.1| flagellar hook-basal body protein FliE [Ketogulonicigenium vulgare
           Y25]
 gi|308755563|gb|ADO43492.1| flagellar hook-basal body protein FliE [Ketogulonicigenium vulgare
           Y25]
          Length = 93

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%)

Query: 16  TDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREA 75
            D          ++         S  +     A      +++ E  ++ A+ G       
Sbjct: 1   MDIRSTLASRAYDAVRAQPQVSDSAGSYFSSAAAEFAATLQQGEAAAMGAMTGDYDPHAL 60

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           V  + Q+E  +  ++ +R+K++ A  E+ +M +
Sbjct: 61  VTALAQSELAIETAVTIRNKVVEAYQEILRMAV 93


>gi|160880850|ref|YP_001559818.1| flagellar hook-basal body complex protein FliE [Clostridium
           phytofermentans ISDg]
 gi|160429516|gb|ABX43079.1| flagellar hook-basal body complex protein FliE [Clostridium
           phytofermentans ISDg]
          Length = 106

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDME---KAENVSLAA 65
             S  S      ++      S     +   +F  + Q              +AE  ++  
Sbjct: 3   ITSISSVQGLGSLKNGIVNGSESAIKNRNQTFETMFQSALDMVKETQAYTDQAEQAAMDY 62

Query: 66  LQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
             G T+   +      +A  +L  ++A+R+ +L A  E+ ++Q
Sbjct: 63  AMGVTNSTHDLQIAQTKASISLQYTVAVRNAVLDAYKEIMQLQ 105


>gi|163939551|ref|YP_001644435.1| flagellar hook-basal body protein FliE [Bacillus weihenstephanensis
           KBAB4]
 gi|229058379|ref|ZP_04196763.1| Flagellar hook-basal body complex [Bacillus cereus AH603]
 gi|163861748|gb|ABY42807.1| flagellar hook-basal body complex [Bacillus weihenstephanensis
           KBAB4]
 gi|228719888|gb|EEL71478.1| Flagellar hook-basal body complex [Bacillus cereus AH603]
          Length = 99

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++   TQ ++E        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGAIQPIGTQKTSETSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|306817685|ref|ZP_07451427.1| flagellar basal-body protein [Mobiluncus mulieris ATCC 35239]
 gi|307699810|ref|ZP_07636861.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|304649499|gb|EFM46782.1| flagellar basal-body protein [Mobiluncus mulieris ATCC 35239]
 gi|307614848|gb|EFN94066.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 142

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 10/116 (8%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI---------SFSALLQDMAKGAI 52
           M + +  + S+ +      +  +         G +           SF  +  D+     
Sbjct: 26  MAQSLGFSRSYATQAGAARLGANPATLQPTRLGVAQGGDIRDVRETSFGNIFADVVANMQ 85

Query: 53  GDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
                A  + + A+ G+   + +      +++ T+ LS  +R+K +   +E+ +MQ
Sbjct: 86  MRERTAHRLGVQAVTGQLNDVHDYTIAAAESQLTIELSSTIRNKAVDMFNEIMRMQ 141


>gi|260779318|ref|ZP_05888210.1| flagellar hook-basal body complex protein FliE [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605482|gb|EEX31777.1| flagellar hook-basal body complex protein FliE [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 118

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                + +  + P+SFS  + ++          A     A   G++  +  A+    +A 
Sbjct: 34  SANPLDVQQVNQPLSFSTAMTNVLDTVNQHQSAASQKMTAVETGQSDDLVGAMIASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++++  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVTSFEDIMKMPV 118


>gi|229132558|ref|ZP_04261407.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST196]
 gi|228650904|gb|EEL06890.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST196]
          Length = 94

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            ++      ++   T  ++E        F  LL    +        A+      L  G  
Sbjct: 1   MLNTQPFGAIQPIGTPKNSETSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVG 56

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 57  ETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|225863604|ref|YP_002748982.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus 03BB102]
 gi|225788447|gb|ACO28664.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus 03BB102]
          Length = 99

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNHTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|229160709|ref|ZP_04288701.1| Flagellar hook-basal body complex [Bacillus cereus R309803]
 gi|228622724|gb|EEK79558.1| Flagellar hook-basal body complex [Bacillus cereus R309803]
          Length = 99

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               I       ++       ++   +    F  LL    +        A+      L  
Sbjct: 3   IQPLIQTQPFGTIQAIGEPKPSQTSAAQGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|239628993|ref|ZP_04672024.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519139|gb|EEQ59005.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 101

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIM 80
             D  ++S  +G + P+ F  +L+   K A   M + + + +    G+   +  A+    
Sbjct: 14  PSDSQKSSPAKGQAGPVPFKEMLRTAVKEADQAMRETQEMDIKLASGQVDNLHTALIQAE 73

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++   +  +  L  K ++A +++  MQ+
Sbjct: 74  KSAAVVEFTTQLASKAVNAYNQIMGMQV 101


>gi|91779971|ref|YP_555179.1| flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
 gi|91692631|gb|ABE35829.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           xenovorans LB400]
          Length = 102

 Score = 49.6 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLS 89
            G +   +F  LL+        +   +   +     G    ++ E +     A      S
Sbjct: 24  SGAAGSANFGDLLRRSLTKISSEQALSTRETQKFELGAQSVALIEVMIDGANAGILFQES 83

Query: 90  IALRDKILSAVSEVSKM 106
           + +R+ ++SA S + ++
Sbjct: 84  LQIRNSLISAYSTIMRL 100


>gi|37525872|ref|NP_929216.1| flagellar hook-basal body 11K protein FliE [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|81419604|sp|Q7N5J9|FLIE_PHOLL RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|36785301|emb|CAE14242.1| flagellar hook-basal body 11K protein FliE [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 103

 Score = 49.6 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 33/107 (30%), Gaps = 6/107 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             IQ   S +       ++                 F++ L             A   + 
Sbjct: 1   MSIQAIESVLQLMQAQALQAASIAKPLPLQS----GFASQLMAAVGKINQTRLNATKRAQ 56

Query: 64  AALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
               G     + + +  + ++   L + +  ++K+ ++  E+  MQ+
Sbjct: 57  DFTLGVPGVELNDVMVEMQKSSIALQIGVQAKNKLTASYQEIMNMQV 103


>gi|300024607|ref|YP_003757218.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526428|gb|ADJ24897.1| flagellar hook-basal body complex protein FliE [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 108

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 46/92 (50%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAV 76
                           G     SF+  L  MA  AI  ++  E  + A ++G+ S+++ V
Sbjct: 17  GAAPTTTPAITPPASAGSVPQASFADTLASMATDAISTIKAGETTATAGMKGQASLQQVV 76

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +M AE+TL   +A+RDK++ A  E+S+MQI
Sbjct: 77  QAVMMAEQTLQTVVAVRDKVVGAYQEISRMQI 108


>gi|224825755|ref|ZP_03698859.1| flagellar hook-basal body complex protein FliE [Lutiella
           nitroferrum 2002]
 gi|224601979|gb|EEG08158.1| flagellar hook-basal body complex protein FliE [Lutiella
           nitroferrum 2002]
          Length = 113

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
              +     +       + +  +   +  SFS  +Q   +        A +       GK
Sbjct: 14  TQLLRDMSGLTKVAAAAEPAGLDAAPAASSFSQAMQGAVREVDAQTRAANDKMAEVDSGK 73

Query: 70  TS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  +  A+    +A  + ++ + +R+K++ AV ++ KM I
Sbjct: 74  SDDLVGAMMLSQEASLSFSMLMQVRNKVVGAVDDLIKMPI 113


>gi|114706770|ref|ZP_01439670.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
           HTCC2506]
 gi|114537718|gb|EAU40842.1| flagellar hook-basal body protein FliE [Fulvimarina pelagi
           HTCC2506]
          Length = 108

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNS-NEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           MI  I  +    + T T            +    +    FS +L  +   A   ++ AE 
Sbjct: 1   MIPAIGSSLFDSTVTQTQAPSASEGMAQVSRTQPTQFNEFSEVLSRVMVDAADTVKTAEA 60

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            S+  + GK S +  V+ +M AERTL  ++A+RDK ++A  E+S+MQI
Sbjct: 61  TSIQGVNGKASTQAVVEAVMSAERTLQTAVAVRDKAVAAYMELSRMQI 108


>gi|118477181|ref|YP_894332.1| flagellar hook-basal body protein FliE [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416406|gb|ABK84825.1| flagellar hook-basal body complex [Bacillus thuringiensis str. Al
           Hakam]
          Length = 109

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 13  IQPMLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 68

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 69  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 109


>gi|209522465|ref|ZP_03271064.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           H160]
 gi|209497104|gb|EDZ97360.1| flagellar hook-basal body complex subunit FliE [Burkholderia sp.
           H160]
          Length = 111

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEE--GGSSPISFSALLQDMAKGAIGDMEKAE 59
           M   +   +S +    T+  +         E  G ++P +F+A L+        D + A 
Sbjct: 1   MTMPVNALSSALQQMQTMAAQAAGDATPAAEQSGAATPTTFAAALKASLDKISSDQQTAI 60

Query: 60  NVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + S A   G    S+ + +  + +A       + +R+K+++A +++++M I
Sbjct: 61  SESKAFELGASNVSLNDVMVDMQKANIGFQFGLQVRNKLVAAYNDIAQMSI 111


>gi|47566128|ref|ZP_00237166.1| flagellar hook-basal body complex protein fliE [Bacillus cereus
           G9241]
 gi|47557045|gb|EAL15375.1| flagellar hook-basal body complex protein fliE [Bacillus cereus
           G9241]
          Length = 99

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      + E        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKNTETSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|30261744|ref|NP_844121.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Ames]
 gi|47526964|ref|YP_018313.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184574|ref|YP_027826.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Sterne]
 gi|65319013|ref|ZP_00391972.1| COG1677: Flagellar hook-basal body protein [Bacillus anthracis str.
           A2012]
 gi|165869356|ref|ZP_02214015.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0488]
 gi|167633339|ref|ZP_02391664.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0442]
 gi|167639085|ref|ZP_02397358.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0193]
 gi|170686065|ref|ZP_02877287.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0465]
 gi|170706510|ref|ZP_02896970.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0389]
 gi|177650580|ref|ZP_02933547.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0174]
 gi|190566457|ref|ZP_03019375.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis Tsiankovskii-I]
 gi|227815497|ref|YP_002815506.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. CDC 684]
 gi|229601953|ref|YP_002866144.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0248]
 gi|254683234|ref|ZP_05147095.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723822|ref|ZP_05185608.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           A1055]
 gi|254734586|ref|ZP_05192298.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740995|ref|ZP_05198683.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Kruger B]
 gi|254755238|ref|ZP_05207272.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Vollum]
 gi|254759774|ref|ZP_05211798.1| flagellar hook-basal body protein FliE [Bacillus anthracis str.
           Australia 94]
 gi|30255972|gb|AAP25607.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. Ames]
 gi|47502112|gb|AAT30788.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178501|gb|AAT53877.1| flagellar hook-basal body complex protein FliE, putative [Bacillus
           anthracis str. Sterne]
 gi|164714796|gb|EDR20314.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0488]
 gi|167512875|gb|EDR88248.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0193]
 gi|167531377|gb|EDR94055.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0442]
 gi|170128608|gb|EDS97475.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0389]
 gi|170669762|gb|EDT20503.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0465]
 gi|172083724|gb|EDT68784.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0174]
 gi|190562592|gb|EDV16559.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis Tsiankovskii-I]
 gi|227004922|gb|ACP14665.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. CDC 684]
 gi|229266361|gb|ACQ47998.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           anthracis str. A0248]
          Length = 99

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|83716521|ref|YP_438372.1| flagellar hook-basal body complex protein FliE [Burkholderia
           thailandensis E264]
 gi|167614818|ref|ZP_02383453.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           thailandensis Bt4]
 gi|257141403|ref|ZP_05589665.1| flagellar hook-basal body complex protein FliE [Burkholderia
           thailandensis E264]
 gi|83650346|gb|ABC34410.1| Flagellar hook-basal body complex protein FliE [Burkholderia
           thailandensis E264]
          Length = 110

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 3   IEQIQGTNSFISHTDTI---GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           +E IQ  +S +                  + + G +   +F+ +L  M K        A 
Sbjct: 1   MESIQQVSSQLRGQMAELAGQAASLSGAIAGQPGHAGDANFTHMLGSMLKEVDNRQLDAA 60

Query: 60  NVSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             ++A   G++  +  AV    +A  + ++   +R+K+ +A+ ++ KMQI
Sbjct: 61  EKAVAVDSGRSDDVIGAVLSSQEASLSFSMLTQVRNKLSTALDDLLKMQI 110


>gi|312115250|ref|YP_004012846.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220379|gb|ADP71747.1| flagellar hook-basal body complex protein FliE [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 102

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAER 84
             +      G++   FS++L  + +    D++  E+V+ A LQG+ S +E V  + +AE 
Sbjct: 19  ALEKKTASAGAATTDFSSVLAALGQQTAVDVKAGESVAAAGLQGRASTQEVVQAVSKAEL 78

Query: 85  TLNLSIALRDKILSAVSEVSKMQI 108
           +L  ++A+RDK +SA  E+++M I
Sbjct: 79  SLQAALAVRDKAVSAYQELTRMTI 102


>gi|269960162|ref|ZP_06174538.1| lateral flagellar FliE-like hook basal body protein [Vibrio harveyi
           1DA3]
 gi|269835133|gb|EEZ89216.1| lateral flagellar FliE-like hook basal body protein [Vibrio harveyi
           1DA3]
          Length = 118

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                +++  ++PISFS  + ++          A     A   G +  +  A+    +A 
Sbjct: 34  SANPLDQQTLNAPISFSQAMTNVLDTVNQHQSVASQKMTAVETGASDDLVGAMVASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++ +  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVMSFEDIMKMPV 118


>gi|83858795|ref|ZP_00952317.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853618|gb|EAP91470.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 104

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 39/82 (47%)

Query: 27  QNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTL 86
             +N    +    F  ++ +  +     ++++E ++  A  G+  + + V  +  AE  L
Sbjct: 23  SQTNPVNEAQGGDFGDMVMNAVESVQQTLQQSETLTAQAATGQAELVDVVTAVAAAEVQL 82

Query: 87  NLSIALRDKILSAVSEVSKMQI 108
              +A+RD+++ A  E+ +M I
Sbjct: 83  ESVVAVRDQVIRAYQEILRMPI 104


>gi|228984829|ref|ZP_04145001.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775027|gb|EEM23421.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 99

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGTIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|228900327|ref|ZP_04064557.1| Flagellar hook-basal body complex [Bacillus thuringiensis IBL 4222]
 gi|228859362|gb|EEN03792.1| Flagellar hook-basal body complex [Bacillus thuringiensis IBL 4222]
          Length = 94

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      +++        F  LL    +        A+      L  G     + +  
Sbjct: 9   AIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|227876738|ref|ZP_03994847.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
           ATCC 35243]
 gi|269976265|ref|ZP_06183261.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
           28-1]
 gi|227842635|gb|EEJ52835.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
           ATCC 35243]
 gi|269935594|gb|EEZ92132.1| flagellar hook-basal body complex subunit FliE [Mobiluncus mulieris
           28-1]
          Length = 142

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 10/116 (8%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPI---------SFSALLQDMAKGAI 52
           M + +  + S+ +      +  +         G +           SF  +  D+     
Sbjct: 26  MAQSLGFSRSYATQAGAARLGANPATLQPTRLGVAQGGDIRDVRETSFGNIFADVVANMQ 85

Query: 53  GDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQ 107
                A  + + A+ G+   + +      +++ T+ LS  +R+K +   +E+ +MQ
Sbjct: 86  MRERTAHRLGVQAVTGQLNDVHDYTIAAAESQLTIELSSTIRNKAVDMFNEIMRMQ 141


>gi|160939667|ref|ZP_02087015.1| hypothetical protein CLOBOL_04559 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437458|gb|EDP15222.1| hypothetical protein CLOBOL_04559 [Clostridium bolteae ATCC
           BAA-613]
          Length = 101

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 30  NEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAERTLNL 88
           +         F ++L++  + A   ++  + + +    G+   +  A+    +    +  
Sbjct: 22  STVKAVPEKRFDSVLKEAVREADQAIKDTQIMDMKLASGQVDNLHTALIQAEKTAAAVEF 81

Query: 89  SIALRDKILSAVSEVSKMQI 108
           +  +  K ++A +++  MQ+
Sbjct: 82  TTQITTKAVNAYNQIMGMQV 101


>gi|229138445|ref|ZP_04267034.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST26]
 gi|228644982|gb|EEL01225.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST26]
          Length = 94

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      + +        F  LL    +        A+      L  G     + +  
Sbjct: 9   TIQSIGAPKNTQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|229166586|ref|ZP_04294338.1| Flagellar hook-basal body complex [Bacillus cereus AH621]
 gi|228616840|gb|EEK73913.1| Flagellar hook-basal body complex [Bacillus cereus AH621]
          Length = 94

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            ++      ++   TQ ++E        F  LL    +        A+      L  G  
Sbjct: 1   MLNTQPFGAIQPIGTQKTSETSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVG 56

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 57  ETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|221640828|ref|YP_002527090.1| flagellar hook-basal body complex protein [Rhodobacter sphaeroides
           KD131]
 gi|221161609|gb|ACM02589.1| flagellar hook-basal body complex protein [Rhodobacter sphaeroides
           KD131]
          Length = 71

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 32/66 (48%)

Query: 43  LLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSE 102
             +  A+     + + E  + AA+ GK      V+ +  ++  +  ++ LRDK++ A  E
Sbjct: 6   AFERAAESFTQTLAQGEETARAAMTGKADPHALVEALAASQMAVETAVTLRDKVVEAYQE 65

Query: 103 VSKMQI 108
           + +M +
Sbjct: 66  ILRMPV 71


>gi|229183937|ref|ZP_04311153.1| Flagellar hook-basal body complex [Bacillus cereus BGSC 6E1]
 gi|228599589|gb|EEK57193.1| Flagellar hook-basal body complex [Bacillus cereus BGSC 6E1]
          Length = 94

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            ++      ++      +++        F  LL    +        A+      L  G  
Sbjct: 1   MLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNHTQNNAQTAVYDLLTKGVG 56

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 57  ETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|52143712|ref|YP_083116.1| flagellar hook-basal body protein FliE [Bacillus cereus E33L]
 gi|51977181|gb|AAU18731.1| flagellar hook-basal body complex [Bacillus cereus E33L]
          Length = 99

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GIGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|229195958|ref|ZP_04322711.1| Flagellar hook-basal body complex [Bacillus cereus m1293]
 gi|228587517|gb|EEK45582.1| Flagellar hook-basal body complex [Bacillus cereus m1293]
          Length = 94

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      + +        F  LL    +        A+      L  G     + +  
Sbjct: 9   AIQSIGVPKNTQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|328469326|gb|EGF40272.1| putative flagellar hook-basal body complex protein [Vibrio
           parahaemolyticus 10329]
          Length = 118

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M+ ++Q   + +   + I          +++  ++P+SFS  + ++          A  
Sbjct: 14  LMLSKMQAMQAQVQPPEFI----VSANPLDQQALNAPLSFSQAITNVLDTVNQHQSAASQ 69

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 70  KMTAVETGQSDDLVGAMVASQKASLSFNALMQVRNKVVASFEDIMKMPV 118


>gi|29423530|gb|AAO73592.1| lateral flagellar FliE-like hook basal body protein [Vibrio
           parahaemolyticus]
          Length = 118

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M+ ++Q   + +   + I          +++  ++P+SFS  + ++          A  
Sbjct: 14  LMLSKMQAMQAQVQPPEFI----VSANPLDQQALNTPLSFSQAMTNVLDTVNQHQSAASQ 69

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 70  KMTAVETGQSDDLVGAMVASQKASLSFNALMQVRNKVVASFEDIMKMPV 118


>gi|30019790|ref|NP_831421.1| flagellar hook-basal body protein FliE [Bacillus cereus ATCC 14579]
 gi|75761143|ref|ZP_00741135.1| Flagellar hook-basal body complex protein fliE [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896678|ref|YP_002445089.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus G9842]
 gi|228958025|ref|ZP_04119761.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229043499|ref|ZP_04191209.1| Flagellar hook-basal body complex [Bacillus cereus AH676]
 gi|229069297|ref|ZP_04202587.1| Flagellar hook-basal body complex [Bacillus cereus F65185]
 gi|229078927|ref|ZP_04211479.1| Flagellar hook-basal body complex [Bacillus cereus Rock4-2]
 gi|229127071|ref|ZP_04256070.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-Cer4]
 gi|229178154|ref|ZP_04305525.1| Flagellar hook-basal body complex [Bacillus cereus 172560W]
 gi|296502345|ref|YP_003664045.1| flagellar hook-basal body protein [Bacillus thuringiensis BMB171]
 gi|29895335|gb|AAP08622.1| Flagellar hook-basal body complex protein fliE [Bacillus cereus
           ATCC 14579]
 gi|74491371|gb|EAO54595.1| Flagellar hook-basal body complex protein fliE [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218542162|gb|ACK94556.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus G9842]
 gi|228605284|gb|EEK62734.1| Flagellar hook-basal body complex [Bacillus cereus 172560W]
 gi|228656424|gb|EEL12263.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-Cer4]
 gi|228704341|gb|EEL56775.1| Flagellar hook-basal body complex [Bacillus cereus Rock4-2]
 gi|228713784|gb|EEL65669.1| Flagellar hook-basal body complex [Bacillus cereus F65185]
 gi|228725877|gb|EEL77124.1| Flagellar hook-basal body complex [Bacillus cereus AH676]
 gi|228801650|gb|EEM48531.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|296323397|gb|ADH06325.1| flagellar hook-basal body protein [Bacillus thuringiensis BMB171]
          Length = 99

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|324325763|gb|ADY21023.1| flagellar hook-basal body protein FliE [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 99

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      + +        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKNTQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|206970823|ref|ZP_03231775.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus AH1134]
 gi|218231410|ref|YP_002366430.1| flagellar hook-basal body protein FliE [Bacillus cereus B4264]
 gi|228920456|ref|ZP_04083801.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229109202|ref|ZP_04238801.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-15]
 gi|229144357|ref|ZP_04272763.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST24]
 gi|229149947|ref|ZP_04278175.1| Flagellar hook-basal body complex [Bacillus cereus m1550]
 gi|206734459|gb|EDZ51629.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus AH1134]
 gi|218159367|gb|ACK59359.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus B4264]
 gi|228633628|gb|EEK90229.1| Flagellar hook-basal body complex [Bacillus cereus m1550]
 gi|228639144|gb|EEK95568.1| Flagellar hook-basal body complex [Bacillus cereus BDRD-ST24]
 gi|228674212|gb|EEL29457.1| Flagellar hook-basal body complex [Bacillus cereus Rock1-15]
 gi|228839086|gb|EEM84382.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 99

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      +++   +    F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKTSQTSVAPEKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|217959229|ref|YP_002337777.1| flagellar hook-basal body protein FliE [Bacillus cereus AH187]
 gi|217065284|gb|ACJ79534.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus AH187]
          Length = 99

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      + +        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGTIQSIGAPKNTQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|27381985|ref|NP_773514.1| flagellar hook-basal body protein FliE [Bradyrhizobium japonicum
           USDA 110]
 gi|38502984|sp|Q89F27|FLIE2_BRAJA RecName: Full=Flagellar hook-basal body complex protein FliE 2
 gi|27355155|dbj|BAC52139.1| flagellar hook-basal body complex protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 109

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 2   MIEQIQ--GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           M+E I     ++  + +     +               + F ++++ +   AIG ++  E
Sbjct: 1   MLEAISSTAISAGQAASRATETQAIAPAAPTAIQSGGDVGFDSVMKQVTTDAIGTLKAGE 60

Query: 60  NVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             S++A+QGK S R  V+ +M AE+ L  ++A+RDK++ A  EV +M I
Sbjct: 61  AASISAMQGKESTRRVVEALMSAEQALQTAVAVRDKVVQAYQEVVRMSI 109


>gi|222095369|ref|YP_002529429.1| flagellar hook-basal body protein flie [Bacillus cereus Q1]
 gi|221239427|gb|ACM12137.1| flagellar hook-basal body complex protein FliE, putative [Bacillus
           cereus Q1]
          Length = 99

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      + +        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGVPKNTQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|152975157|ref|YP_001374674.1| flagellar hook-basal body protein FliE [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023909|gb|ABS21679.1| flagellar hook-basal body complex protein FliE, putative [Bacillus
           cytotoxicus NVH 391-98]
          Length = 99

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++   T  +++        F  LL    +        A+      L  
Sbjct: 3   IEPMLNTQPFGSIQSIGTPKNSQSSVIEGKRFIELL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++    ++  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAAVIRDNLIENYKQLLNMQI 99


>gi|196044980|ref|ZP_03112213.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus 03BB108]
 gi|196023982|gb|EDX62656.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus 03BB108]
          Length = 99

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGVVQQIGAPKTSQTSVVEGKKFIDLL----EDMNHTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|28901392|ref|NP_801047.1| putative flagellar hook-basal body complex protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153836092|ref|ZP_01988759.1| flagellar hook-basal body complex protein (FliE) [Vibrio
           parahaemolyticus AQ3810]
 gi|260362946|ref|ZP_05775815.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus K5030]
 gi|260880233|ref|ZP_05892588.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AN-5034]
 gi|260895350|ref|ZP_05903846.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus Peru-466]
 gi|260901175|ref|ZP_05909570.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AQ4037]
 gi|28809939|dbj|BAC62880.1| putative flagellar hook-basal body complex protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750846|gb|EDM61591.1| flagellar hook-basal body complex protein (FliE) [Vibrio
           parahaemolyticus AQ3810]
 gi|308085765|gb|EFO35460.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus Peru-466]
 gi|308091943|gb|EFO41638.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AN-5034]
 gi|308109331|gb|EFO46871.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus AQ4037]
 gi|308112079|gb|EFO49619.1| flagellar hook-basal body complex protein FliE [Vibrio
           parahaemolyticus K5030]
          Length = 118

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           +M+ ++Q   + +   + I          +++  ++P+SFS  + ++          A  
Sbjct: 14  LMLSKMQAMQAQVQPPEFIVS----ANPLDQQALNAPLSFSQAMTNVLDTVNQHQSAASQ 69

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A   G++  +  A+    +A  + N  + +R+K++++  ++ KM +
Sbjct: 70  KMTAVETGQSDDLVGAMVASQKASLSFNALMQVRNKVVASFEDIMKMPV 118


>gi|163800133|ref|ZP_02194034.1| flagellar biosynthesis protein P [Vibrio sp. AND4]
 gi|159175576|gb|EDP60370.1| flagellar biosynthesis protein P [Vibrio sp. AND4]
          Length = 118

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 25  FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIMQAE 83
                +++  ++P+SFS  + ++          A     A   G +  +  A+    +A 
Sbjct: 34  SANPLDQQSLNAPLSFSQAMTNVLDTVNQHQSVASQKMTAVETGASDDLVGAMVASQKAS 93

Query: 84  RTLNLSIALRDKILSAVSEVSKMQI 108
            + N  + +R+K++ +  ++ KM +
Sbjct: 94  LSFNALMQVRNKVVMSFEDIMKMPV 118


>gi|42780838|ref|NP_978085.1| flagellar hook-basal body protein FliE [Bacillus cereus ATCC 10987]
 gi|206974853|ref|ZP_03235768.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus H3081.97]
 gi|42736758|gb|AAS40693.1| flagellar hook-basal body complex protein FliE, putative [Bacillus
           cereus ATCC 10987]
 gi|206746872|gb|EDZ58264.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus H3081.97]
          Length = 99

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      + +        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKNTQASVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|86356311|ref|YP_468203.1| flagellar hook-basal body protein FliE [Rhizobium etli CFN 42]
 gi|123513037|sp|Q2KCG0|FLIE_RHIEC RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|86280413|gb|ABC89476.1| flagellar hook-basal body protein [Rhizobium etli CFN 42]
          Length = 113

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +           T      G ++ +SF+++L  MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSAATTMPGTAGAANGLSFASVLGGMASDAVNSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|228907378|ref|ZP_04071236.1| Flagellar hook-basal body complex [Bacillus thuringiensis IBL 200]
 gi|228933029|ref|ZP_04095892.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229172392|ref|ZP_04299951.1| Flagellar hook-basal body complex [Bacillus cereus MM3]
 gi|228610863|gb|EEK68126.1| Flagellar hook-basal body complex [Bacillus cereus MM3]
 gi|228826630|gb|EEM72401.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228852239|gb|EEM97035.1| Flagellar hook-basal body complex [Bacillus thuringiensis IBL 200]
          Length = 94

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKT 70
            ++      ++      +++        F  LL    +        A+      L  G  
Sbjct: 1   MLNTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVG 56

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 57  ETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|229189842|ref|ZP_04316853.1| Flagellar hook-basal body complex [Bacillus cereus ATCC 10876]
 gi|228593650|gb|EEK51458.1| Flagellar hook-basal body complex [Bacillus cereus ATCC 10876]
          Length = 99

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYNLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|228938859|ref|ZP_04101459.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971740|ref|ZP_04132361.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978349|ref|ZP_04138726.1| Flagellar hook-basal body complex [Bacillus thuringiensis Bt407]
 gi|228781366|gb|EEM29567.1| Flagellar hook-basal body complex [Bacillus thuringiensis Bt407]
 gi|228787830|gb|EEM35788.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820708|gb|EEM66733.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 94

 Score = 47.7 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDH 78
            ++      +++        F  LL    +        A+      L  G     + +  
Sbjct: 9   AIQSIGASKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQ 64

Query: 79  IMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +AE  +  +  +RD ++     +  MQI
Sbjct: 65  QKKAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|49480941|ref|YP_035865.1| flagellar hook-basal body protein FliE [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|196033628|ref|ZP_03101040.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus W]
 gi|196038910|ref|ZP_03106217.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus NVH0597-99]
 gi|218902860|ref|YP_002450694.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus AH820]
 gi|49332497|gb|AAT63143.1| flagellar hook-basal body complex [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|195994062|gb|EDX58018.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus W]
 gi|196030055|gb|EDX68655.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus NVH0597-99]
 gi|218536322|gb|ACK88720.1| putative flagellar hook-basal body complex protein FliE [Bacillus
           cereus AH820]
          Length = 99

 Score = 47.7 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGVVQQIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|326939359|gb|AEA15255.1| flagellar hook-basal body protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 99

 Score = 47.7 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               +       ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLHTQPFGAIQSIGASKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|315126012|ref|YP_004068015.1| lateral flagellar hook basal body protein, LfiE [Pseudoalteromonas
           sp. SM9913]
 gi|315014526|gb|ADT67864.1| lateral flagellar hook basal body protein, LfiE [Pseudoalteromonas
           sp. SM9913]
          Length = 107

 Score = 47.3 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  I+     +     +               +  ++ S   + + +        A  + 
Sbjct: 1   MSPIESQQMMLGKMMDMQKIAGPESIEPAAISNQNVNISEDFKHVIRSINAQQNIAGEMV 60

Query: 63  LAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A   G++  +  A+    +A  + ++ + +R+K+L+ + +V +M +
Sbjct: 61  KAVDTGESEDVVGAMIASQKAGLSFSMLMEMRNKVLNGIDDVMRMSL 107


>gi|319898636|ref|YP_004158729.1| flagellar hook-basal body complex protein fliE [Bartonella
           clarridgeiae 73]
 gi|319402600|emb|CBI76145.1| Flagellar hook-basal body complex protein fliE [Bartonella
           clarridgeiae 73]
          Length = 126

 Score = 47.3 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 2   MIEQIQGTNS--FISHTDTIGMRYDFTQNSNEEGG----SSPISFSALLQDMAKGAIGDM 55
           MIE +    S   ++      M+           G     + +SF  +L ++ +     +
Sbjct: 13  MIEALTSVASHNVLNSLGKENMQMHSLNGQQISPGMVERGNKVSFDEVLSEVVEVVGTKL 72

Query: 56  EKAENVSLAALQG-KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + AE++S+  + G    +RE V+ +M+AER+L+++IALRDK++ A  EVS+MQI
Sbjct: 73  QTAESLSIGRISGSDVGVREVVNSVMEAERSLSIAIALRDKLVQAYLEVSRMQI 126


>gi|238916745|ref|YP_002930262.1| hypothetical protein EUBELI_00807 [Eubacterium eligens ATCC 27750]
 gi|238872105|gb|ACR71815.1| Hypothetical protein EUBELI_00807 [Eubacterium eligens ATCC 27750]
          Length = 114

 Score = 47.3 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 6/114 (5%)

Query: 1   MMIEQIQGTNSFISHT--DTIGMRYDFTQNSNEEGGSSPISFS---ALLQDMAKGAIGDM 55
           M ++      +  S           D           S  +F      +  +       +
Sbjct: 1   MNMDLTSAIGTLGSDYVNKVTSAMKDNATLKTTGTADSDTTFDAIYDSVSGLLNSTNSYV 60

Query: 56  EKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           ++A+   +    G  T+  E   +  +A   L  ++A+RDK L A + +  M +
Sbjct: 61  QRAQQAEIDYALGNMTNTHELGVYQQEANIALQYTVAIRDKALEAYNSIMNMSM 114


>gi|228914324|ref|ZP_04077939.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228926781|ref|ZP_04089849.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228945348|ref|ZP_04107703.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229121297|ref|ZP_04250528.1| Flagellar hook-basal body complex [Bacillus cereus 95/8201]
 gi|229155316|ref|ZP_04283427.1| Flagellar hook-basal body complex [Bacillus cereus ATCC 4342]
 gi|228628241|gb|EEK84957.1| Flagellar hook-basal body complex [Bacillus cereus ATCC 4342]
 gi|228662142|gb|EEL17751.1| Flagellar hook-basal body complex [Bacillus cereus 95/8201]
 gi|228814320|gb|EEM60586.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228832894|gb|EEM78463.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228845318|gb|EEM90354.1| Flagellar hook-basal body complex [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 94

 Score = 47.3 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDHIM 80
           +      +++        F  LL    +        A+      L  G     + +    
Sbjct: 11  QQIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQQK 66

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +AE  +  +  +RD ++     +  MQI
Sbjct: 67  KAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|300117336|ref|ZP_07055126.1| flagellar hook-basal body protein FliE [Bacillus cereus SJ1]
 gi|298725171|gb|EFI65823.1| flagellar hook-basal body protein FliE [Bacillus cereus SJ1]
          Length = 99

 Score = 47.3 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGVVQQIGAPKNSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|115523178|ref|YP_780089.1| flagellar hook-basal body protein FliE [Rhodopseudomonas palustris
           BisA53]
 gi|115517125|gb|ABJ05109.1| flagellar hook-basal body complex protein FliE [Rhodopseudomonas
           palustris BisA53]
          Length = 106

 Score = 47.3 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           M++ +    S +S                  GGS+ + F  +L+ +A  AIG M+  E  
Sbjct: 1   MLDAVSSMTSSVSGVAKSSDVAQSASALAPTGGSA-VGFDGVLEQVAADAIGSMKAGEAA 59

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S++++QGK S +  V+ +M AERTL +++A+RDK++ A  EVS+M I
Sbjct: 60  SISSIQGKVSAQRVVEAMMSAERTLQMAVAVRDKVVQAYQEVSRMAI 106


>gi|301053282|ref|YP_003791493.1| flagellar basal body protein [Bacillus anthracis CI]
 gi|300375451|gb|ADK04355.1| flagellar basal body protein [Bacillus cereus biovar anthracis str.
           CI]
          Length = 99

 Score = 47.3 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 5/101 (4%)

Query: 9   TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ- 67
               ++      ++      +++        F  LL    +        A+      L  
Sbjct: 3   IQPMLNTQPFGVVQQIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTK 58

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G     + +    +AE  +  +  +RD ++     +  MQI
Sbjct: 59  GIGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99


>gi|190890362|ref|YP_001976904.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
 gi|226704239|sp|B3PPL9|FLIE_RHIE6 RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|190695641|gb|ACE89726.1| flagellar hook-basal body protein [Rhizobium etli CIAT 652]
          Length = 113

 Score = 46.9 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +                  G ++ +SF++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSSAATMPGTAGAANGVSFASVMGNMASDAVNSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|229090706|ref|ZP_04221939.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-42]
 gi|228692648|gb|EEL46374.1| Flagellar hook-basal body complex [Bacillus cereus Rock3-42]
          Length = 94

 Score = 46.9 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAVDHIM 80
           +      +++        F  LL    +        A+      L  G     + +    
Sbjct: 11  QQIGAPKTSQTSVVEGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGIGETHDVLIQQK 66

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +AE  +  +  +RD ++     +  MQI
Sbjct: 67  KAESQMKTAALVRDNLIENYKSLINMQI 94


>gi|50954403|ref|YP_061691.1| flagellar basal-body protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950885|gb|AAT88586.1| flagellar basal-body protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 104

 Score = 46.9 bits (110), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             I       +                    +    F+A L     G       ++ +++
Sbjct: 1   MPISALAPLTAT--GSAGPIGPAVPVAGRSPAGDGGFAASLASAVNGVQQSQTVSDRLNI 58

Query: 64  AALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
            A+ G    +++A     +    + L   ++++ + A + + +M
Sbjct: 59  QAVTGSLDDIQDATVAAARVSTEIQLFATVKNQAVDAFNTIMRM 102


>gi|218516083|ref|ZP_03512923.1| flagellar hook-basal body protein FliE [Rhizobium etli 8C-3]
          Length = 113

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +                  G ++ ++F++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSSAATMPGTAGAANGVNFASVMGNMASDAVNSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|326791544|ref|YP_004309365.1| flagellar hook-basal body complex protein FliE [Clostridium
           lentocellum DSM 5427]
 gi|326542308|gb|ADZ84167.1| flagellar hook-basal body complex protein FliE [Clostridium
           lentocellum DSM 5427]
          Length = 102

 Score = 46.5 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 15/112 (13%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           MI  IQG        + I               +   SF+  L D AK  I   + AE  
Sbjct: 1   MIAAIQGIQLNQQLMNKIQDEKKL---------TGNESFTYAL-DAAKELIQANKTAEAE 50

Query: 62  SLAALQG-----KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +              +   +    ++   L  ++ +R+ +LSA  E+  + +
Sbjct: 51  TKNLTNDFITGANDDIASLLIAQEKSGILLQYTLQVRNGLLSAYKEIMNLSV 102


>gi|260222431|emb|CBA31988.1| Flagellar hook-basal body complex protein fliE [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 67

 Score = 46.5 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 44  LQDMAKGAIGDMEKAENVS--LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVS 101
           +++          ++  +   +     K S+ E +  I +A+     ++ +R++++ A +
Sbjct: 1   MKNALSSVSAAQNESSRLQREVQMENPKVSLEETMVAIQKAQIGFQATLHVRNRMVQAYT 60

Query: 102 EVSKMQI 108
           ++  MQ+
Sbjct: 61  DIMNMQV 67


>gi|320535380|ref|ZP_08035494.1| flagellar hook-basal body complex protein FliE [Treponema
           phagedenis F0421]
 gi|320147782|gb|EFW39284.1| flagellar hook-basal body complex protein FliE [Treponema
           phagedenis F0421]
          Length = 122

 Score = 46.2 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ--GKTSMREAVD 77
                 T + +       +SF   L           +K   ++   +       + +   
Sbjct: 33  SKMKSTTDSVDLAVNKKAMSFEQTLLKAFDSVNAKQQKTTELTEQMIVNPDSVDVHDVTI 92

Query: 78  HIMQAERTLNLSIALRDKILSAVSEV 103
            + +A  +L ++  + DK++ + +++
Sbjct: 93  AMAEAGMSLKIAQTVIDKVIKSWNDI 118


>gi|327193035|gb|EGE59947.1| flagellar hook-basal body protein FliE [Rhizobium etli CNPAF512]
          Length = 113

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +                  G ++ +SF++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSSAATMPGTAGAANGMSFASVMGNMASDAVNSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|218672514|ref|ZP_03522183.1| flagellar hook-basal body protein FliE [Rhizobium etli GR56]
          Length = 113

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 63/106 (59%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +           T      G ++ +SF++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSSATTMPGTAGAANGMSFASVMGNMATEAVNSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|116250481|ref|YP_766319.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255129|emb|CAK06203.1| putative flagellar hook-basal body complex protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 101

 Score = 45.8 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 57/89 (64%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHI 79
                        G ++ +SF++++ +MA  A+  ++ AE++S A ++G  + RE VD +
Sbjct: 13  SASSSAATMPGAAGAANGMSFASVMGNMASDAVNSLKGAESMSFAGIKGTATTREVVDSM 72

Query: 80  MQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 73  LQAEQTLQTAIAIRDKVVSAFLEVTKMQM 101


>gi|15639389|ref|NP_218838.1| flagellar hook-basal body protein FliE [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025631|ref|YP_001933403.1| flagellar hook-basal body protein FliE [Treponema pallidum subsp.
           pallidum SS14]
 gi|6016021|sp|O83413|FLIE_TREPA RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|226704249|sp|B2S2Z5|FLIE_TREPS RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|3322681|gb|AAC65386.1| flagellar hook-basal body complex protein (fliE) [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189018206|gb|ACD70824.1| flagellar hook-basal body complex protein [Treponema pallidum
           subsp. pallidum SS14]
 gi|291059788|gb|ADD72523.1| flagellar hook-basal body complex protein FliE [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 124

 Score = 45.8 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 20  GMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVD 77
                 T   ++      +SF   L           +K   ++   +       + +   
Sbjct: 35  QRMRGNTDAVDQAVNKKAMSFEQTLLRAFDQVNQKQQKTAELTEQMIVDPESVDVHDVTV 94

Query: 78  HIMQAERTLNLSIALRDKILSAVSEV 103
            + +A  +L ++  + DK+L + ++V
Sbjct: 95  AMAEASMSLKIAQTVIDKVLKSWNDV 120


>gi|291085843|ref|ZP_06354213.2| flagellar hook-basal body complex protein FliE [Citrobacter youngae
           ATCC 29220]
 gi|291070019|gb|EFE08128.1| flagellar hook-basal body complex protein FliE [Citrobacter youngae
           ATCC 29220]
          Length = 117

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 19  IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVD 77
                      N +  SS +SF  ++Q          + AE    A   GK+  +  A+ 
Sbjct: 27  AQAPVLSPMQVNGQLASSSVSFDRVMQGALNHVDRFQQVAEQQQTAIEMGKSDDLAGAMI 86

Query: 78  HIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              QA  + +  + +R+K+ S  +++  M +
Sbjct: 87  ASQQASLSFSALVQVRNKVASGFNDLMSMSV 117


>gi|302384098|ref|YP_003819921.1| flagellar hook-basal body complex protein FliE [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194726|gb|ADL02298.1| flagellar hook-basal body complex protein FliE [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 99

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSM 72
           +               S     +    FS +LQ +          AE     A+QG+ SM
Sbjct: 4   LMAARAYAATQGTGGASAGAAVAGGPDFSQMLQGVMGNMTQQTRAAETQMTQAVQGQGSM 63

Query: 73  REAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + V  +  AE +L   IA+RD+++ A  E+ +M +
Sbjct: 64  IDMVTAVSSAEASLETVIAVRDQVIQAYQEIMRMPV 99


>gi|146309432|ref|YP_001189897.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           mendocina ymp]
 gi|145577633|gb|ABP87165.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           mendocina ymp]
          Length = 111

 Score = 45.0 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 13  ISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS- 71
           +     +             G      F+A   D  +       ++  +  A   G++  
Sbjct: 15  MEQLKNLSEAAPIKPAQAFAGQPGEAGFAAAFDDAVRAVDAQQHRSGALMAAVDSGQSDD 74

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           +  A+    +A  + +  + +R+K+ SA  ++ KM +
Sbjct: 75  LVGAMIESQKASVSFSALLQVRNKLASAFDDIMKMPL 111


>gi|241203105|ref|YP_002974201.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856995|gb|ACS54662.1| flagellar hook-basal body complex protein FliE [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 113

 Score = 45.0 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +                  G ++ +SF++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSTSSSAATMPGAAGAANGMSFASVMGNMASDAVSSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|327478786|gb|AEA82096.1| flagellar hook-basal body complex subunit FliE [Pseudomonas
           stutzeri DSM 4166]
          Length = 106

 Score = 44.6 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
            +     +    +          ++ IS S   +   +    +  KA     A   GK+ 
Sbjct: 11  LLGRMQQLASVAEGQPIRPSSMAANAISGS--FEAALRSVDAEQHKASAAMAAVDSGKSD 68

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +  A+    +A  + +  + +R+K+ +A  +V +M +
Sbjct: 69  DLVGAMIDSQKASVSFSALLQVRNKLTTAFDDVMRMPL 106


>gi|319409188|emb|CBI82832.1| Flagellar hook-basal body complex protein fliE [Bartonella
           schoenbuchensis R1]
          Length = 114

 Score = 44.6 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 17  DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREA 75
             +               SS +SFS +L ++   A   ++ AE++S+ +L G    +RE 
Sbjct: 22  GQMNSAAMQHLPVQAAEESSSVSFSKILSEVVGTAEMKLQNAESLSIGSLAGNDVGVREV 81

Query: 76  VDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           V+ +M+AER+L+ +IALRDK++ A  EVS+MQI
Sbjct: 82  VNSVMEAERSLSTAIALRDKMVQAYLEVSRMQI 114


>gi|209547927|ref|YP_002279844.1| flagellar hook-basal body protein FliE [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226704240|sp|B5ZQD7|FLIE_RHILW RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|209533683|gb|ACI53618.1| flagellar hook-basal body complex protein FliE [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 113

 Score = 44.2 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 62/106 (58%)

Query: 3   IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
           +  +  T +  +                  G ++ +SF++++ +MA  A+  ++ AE++S
Sbjct: 8   VSNLSMTRALGAVDTENSASSSAATMPGTAGAANNMSFASVMGNMASDAVSSLKGAESMS 67

Query: 63  LAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A ++G  + RE VD ++QAE+TL  +IA+RDK++SA  EV+KMQ+
Sbjct: 68  FAGIKGTATTREVVDSMLQAEQTLQTAIAIRDKVVSAFLEVTKMQM 113


>gi|117928048|ref|YP_872599.1| flagellar hook-basal body complex subunit FliE [Acidothermus
           cellulolyticus 11B]
 gi|117648511|gb|ABK52613.1| flagellar hook-basal body complex subunit FliE [Acidothermus
           cellulolyticus 11B]
          Length = 102

 Score = 43.9 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 1/99 (1%)

Query: 11  SFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK- 69
           S        G       ++     ++   F   L             A++++  A  G  
Sbjct: 4   SISPLPAVSGAAALTGSSAAASTQANAGDFGTALTRGIDALQQLQAHADDLATQAATGSL 63

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             +   +    +A     L+ A+RDK ++A + +  MQ+
Sbjct: 64  ADITSYMIASNEAAIATELTTAVRDKAIAAFTSIMNMQM 102


>gi|317133490|ref|YP_004092804.1| flagellar hook-basal body complex protein FliE [Ethanoligenens
           harbinense YUAN-3]
 gi|315471469|gb|ADU28073.1| flagellar hook-basal body complex protein FliE [Ethanoligenens
           harbinense YUAN-3]
          Length = 98

 Score = 43.9 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS 71
                          Q ++         F  +   +  G        +   + A  G+  
Sbjct: 1   MPQIASLSQTGLSTAQTASGTTVDGTQMFGDIYNQLVDGVNQTDSAFQADIVKAAAGEMD 60

Query: 72  -MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              + +    +A+  L L+ ++R+  L A + V  MQ+
Sbjct: 61  NPAQLLIDSSKAQVALQLASSVRNNALQAYNTVMNMQV 98


>gi|34498455|ref|NP_902670.1| flagellar hook-basal body complex protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34104310|gb|AAQ60669.1| probable flagellar hook-basal body complex protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 93

 Score = 43.9 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 22  RYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MREAVDHIM 80
           +      + +E  ++  SFS  +    +        A         G++  +  A+    
Sbjct: 6   QSAPAPIAAQEDAATGHSFSQAMVSAVRDVDQQNRLAAEKMTEVDSGQSDDLVGAMLMSQ 65

Query: 81  QAERTLNLSIALRDKILSAVSEVSKMQI 108
           +A  + ++ + +R+K++ AV ++ KMQ+
Sbjct: 66  EASLSFSMLMQVRNKVVGAVDDLIKMQL 93


>gi|258511106|ref|YP_003184540.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477832|gb|ACV58151.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 98

 Score = 43.9 bits (102), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 1/98 (1%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-T 70
            I+   ++ +       S        +SFS  L +          +A+ +++    G   
Sbjct: 1   MIAPVTSVSLAGVGPAASAGGAALGGMSFSDYLGEALDAVNQAAARADQLAVEYASGGPV 60

Query: 71  SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           S  + +    QA   +++   +  ++  A + +  MQI
Sbjct: 61  STADLMIAGTQASLAVDMLSQVATRVQQAYTTLMNMQI 98


>gi|257457888|ref|ZP_05623047.1| flagellar hook-basal body complex protein FliE [Treponema vincentii
           ATCC 35580]
 gi|257444601|gb|EEV19685.1| flagellar hook-basal body complex protein FliE [Treponema vincentii
           ATCC 35580]
          Length = 120

 Score = 43.1 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 31  EEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNL 88
                  +SF   L           ++ E +    +       + +    + +A  +L +
Sbjct: 42  TAVNKKAMSFEQTLLKAFDEINAKQQRTEELGQQMIVDPESVDVHDITIAMAEAGMSLKI 101

Query: 89  SIALRDKILSAVSEV 103
           +  L D+++ + +++
Sbjct: 102 AQTLIDRVVKSWNDI 116


>gi|206895146|ref|YP_002246682.1| flagellar hook-basal body complex protein FliE [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737763|gb|ACI16841.1| flagellar hook-basal body complex protein FliE [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 98

 Score = 42.7 bits (99), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 12/109 (11%)

Query: 1   MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN 60
           M I+ + G          I        +   E   +  +FS LL            + + 
Sbjct: 1   MGIDPVSGF-------GPIKPISPIDVSKTGETQGATDAFSKLL----DQLSAKESEQDL 49

Query: 61  VSLAALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
              A  QG    + EA+    + +  L L   +R++++SA  E  ++ +
Sbjct: 50  YRNAIAQGNMDILPEALVSATEFQVGLLLVTQIRNQLVSAFQEFMRLPL 98


>gi|283784014|ref|YP_003363879.1| lateral flagellar basal body component protein [Citrobacter
           rodentium ICC168]
 gi|282947468|emb|CBG87015.1| lateral flagellar basal body component protein [Citrobacter
           rodentium ICC168]
          Length = 118

 Score = 42.3 bits (98), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 15  HTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTS-MR 73
                       Q S     SS +SF  ++Q          + AE    A   GK+  + 
Sbjct: 24  QAVARTPVLSSMQISAAGEASSTVSFHRIMQGALSHVDQFQQAAEEKQTAIDMGKSDDLA 83

Query: 74  EAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 84  GAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 118


>gi|331645401|ref|ZP_08346505.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M605]
 gi|331045563|gb|EGI17689.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           M605]
          Length = 113

 Score = 41.5 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +     +         +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPSMTFSSTDPEVSFNRIMYGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AVDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|301646795|ref|ZP_07246649.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           146-1]
 gi|306813321|ref|ZP_07447514.1| Lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli NC101]
 gi|307136843|ref|ZP_07496199.1| Lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli H736]
 gi|331640698|ref|ZP_08341845.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H736]
 gi|301075030|gb|EFK89836.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           146-1]
 gi|305854084|gb|EFM54523.1| Lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli NC101]
 gi|315616842|gb|EFU97459.1| flagellar hook-basal body complex FliE family protein [Escherichia
           coli 3431]
 gi|331040072|gb|EGI12280.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           H736]
          Length = 113

 Score = 41.5 bits (96), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMYGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AVDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|323975945|gb|EGB71039.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TW10509]
          Length = 113

 Score = 41.2 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMFGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AVDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|299822288|ref|ZP_07054174.1| flagellar hook-basal body complex protein FliE [Listeria grayi DSM
           20601]
 gi|299815817|gb|EFI83055.1| flagellar hook-basal body complex protein FliE [Listeria grayi DSM
           20601]
          Length = 98

 Score = 41.2 bits (95), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                      S + G       +     M          AEN +   +  G+ +  + +
Sbjct: 7   ASSAVSSLPLQSPKGGTEQVTESADTFASMFDKMSDVQNNAENSAYKMVTTGEGNTSDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++   Q+
Sbjct: 67  IQMKKAESQMKTAAVIRDNLVESYKQLLNTQV 98


>gi|331671786|ref|ZP_08372582.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA280]
 gi|331070775|gb|EGI42134.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA280]
          Length = 113

 Score = 41.2 bits (95), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q                              +SF+ ++Q          + AE    
Sbjct: 8   STMQAQIMQDVQRMQANALAPVLPAMTFSSTDPDVSFNRIMQGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|254292930|ref|YP_003058953.1| flagellar hook-basal body complex subunit FliE [Hirschia baltica
           ATCC 49814]
 gi|254041461|gb|ACT58256.1| flagellar hook-basal body complex subunit FliE [Hirschia baltica
           ATCC 49814]
          Length = 104

 Score = 41.2 bits (95), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 43/101 (42%)

Query: 8   GTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ 67
           G  +  +            ++S   GG S   F  +L        G   +AEN   +A  
Sbjct: 4   GATAATNAYMKAAQAALKPESSQNVGGISGAPFGQILDAAISQTSGAANQAENAIASATM 63

Query: 68  GKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           G   + + V  +  AE TL   +A+RD+++SA  EV +M I
Sbjct: 64  GNADLVDVVTAVAAAEATLETVVAVRDQVISAYQEVMRMPI 104


>gi|170682132|ref|YP_001742356.1| lateral flagellar basal body component protein LfiE [Escherichia
           coli SMS-3-5]
 gi|300936109|ref|ZP_07151049.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           21-1]
 gi|170519850|gb|ACB18028.1| lateral flagellar basal body component protein LfiE [Escherichia
           coli SMS-3-5]
 gi|300458729|gb|EFK22222.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           21-1]
 gi|323191521|gb|EFZ76782.1| flagellar hook-basal body complex protein FliE family protein
           [Escherichia coli RN587/1]
 gi|327254535|gb|EGE66151.1| flagellar hook-basal body complex protein FliE family protein
           [Escherichia coli STEC_7v]
          Length = 113

 Score = 40.8 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMSGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AVDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|302387797|ref|YP_003823619.1| flagellar hook-basal body complex protein FliE [Clostridium
           saccharolyticum WM1]
 gi|302198425|gb|ADL05996.1| flagellar hook-basal body complex protein FliE [Clostridium
           saccharolyticum WM1]
          Length = 103

 Score = 40.8 bits (94), Expect = 0.063,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 12  FISHTDTIGMRYDFTQNSNEEGGSSPIS-FSALLQDMAKGAIGDMEKAENVSLAALQGKT 70
           FI+    I    D         G +  S F  + ++  +      E           G+ 
Sbjct: 5   FITPMVPINSIADIGSEKKVTSGQTGSSMFQDIFKEAIQNVKSTDENLTMQEYLLSTGQI 64

Query: 71  S-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
                      +A+ +  L  ALR+K L A +E+ ++ I
Sbjct: 65  DDAHTVPAAAAKAQLSAELLTALRNKALEAYNEMIRINI 103


>gi|293408352|ref|ZP_06652191.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471530|gb|EFF14013.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 113

 Score = 40.8 bits (94), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++Q          + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMQGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|218703510|ref|YP_002411029.1| lateral flagellar basal body component FliE-like protein
           [Escherichia coli UMN026]
 gi|293403340|ref|ZP_06647431.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378952|ref|ZP_06988833.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           FVEC1302]
 gi|300898055|ref|ZP_07116424.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           198-1]
 gi|59889766|emb|CAH19121.1| Lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli]
 gi|218430607|emb|CAR11473.1| Lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli UMN026]
 gi|284920030|emb|CBG33086.1| lateral flagellar basal body component protein (FliE-like)
           [Escherichia coli 042]
 gi|291429193|gb|EFF02213.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280065|gb|EFI21569.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           FVEC1302]
 gi|300358233|gb|EFJ74103.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           198-1]
          Length = 113

 Score = 40.8 bits (94), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMSGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|188493963|ref|ZP_03001233.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           53638]
 gi|188489162|gb|EDU64265.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           53638]
          Length = 113

 Score = 40.8 bits (94), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMSGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDLGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|323171046|gb|EFZ56695.1| flagellar hook-basal body complex protein FliE family protein
           [Escherichia coli LT-68]
          Length = 113

 Score = 40.8 bits (94), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF+ ++Q          + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFNRIMQGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDLGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|170021375|ref|YP_001726329.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           ATCC 8739]
 gi|169756303|gb|ACA79002.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           ATCC 8739]
          Length = 113

 Score = 40.4 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +            +  +SF+ ++           + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTNPDVSFNRIMSGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|256020213|ref|ZP_05434078.1| Lateral flagellar basal body component protein (FliE-like)
           [Shigella sp. D9]
 gi|260853452|ref|YP_003227343.1| putative lateral flagellar basal-body component protein
           [Escherichia coli O26:H11 str. 11368]
 gi|260866398|ref|YP_003232800.1| putative lateral flagellar basal-body component protein
           [Escherichia coli O111:H- str. 11128]
 gi|300817287|ref|ZP_07097505.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           107-1]
 gi|307315212|ref|ZP_07594791.1| flagellar hook-basal body complex protein FliE [Escherichia coli W]
 gi|331666531|ref|ZP_08367405.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA271]
 gi|332281375|ref|ZP_08393788.1| lateral flagellar basal body component protein [Shigella sp. D9]
 gi|257752101|dbj|BAI23603.1| predicted lateral flagellar basal-body component protein
           [Escherichia coli O26:H11 str. 11368]
 gi|257762754|dbj|BAI34249.1| predicted lateral flagellar basal-body component protein
           [Escherichia coli O111:H- str. 11128]
 gi|300530263|gb|EFK51325.1| flagellar hook-basal body complex protein FliE [Escherichia coli MS
           107-1]
 gi|306905393|gb|EFN35930.1| flagellar hook-basal body complex protein FliE [Escherichia coli W]
 gi|315059473|gb|ADT73800.1| Lateral flagellar basal body component protein [Escherichia coli W]
 gi|323158009|gb|EFZ44110.1| flagellar hook-basal body complex FliE family protein [Escherichia
           coli EPECa14]
 gi|323178509|gb|EFZ64087.1| flagellar hook-basal body complex protein FliE family protein
           [Escherichia coli 1180]
 gi|323181531|gb|EFZ66951.1| flagellar hook-basal body complex protein FliE family protein
           [Escherichia coli 1357]
 gi|323379969|gb|ADX52237.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           KO11]
 gi|331065755|gb|EGI37639.1| flagellar hook-basal body complex protein FliE [Escherichia coli
           TA271]
 gi|332103727|gb|EGJ07073.1| lateral flagellar basal body component protein [Shigella sp. D9]
          Length = 113

 Score = 40.4 bits (93), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 4   EQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSL 63
             +Q              +               +SF  ++Q          + AE    
Sbjct: 8   STMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFHRIMQGALGHVDQFQQVAEQQQT 67

Query: 64  AALQGKTS-MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           A   GK+  +  A+    QA  + +  + +R+KI +  +++  M I
Sbjct: 68  AIDMGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI 113


>gi|116872101|ref|YP_848882.1| flagellar hook-basal body protein FliE [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740979|emb|CAK20099.1| flagellar hook-basal body complex protein FliE [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 98

 Score = 40.0 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
           +                 S          M          A+      L  G+ +  + +
Sbjct: 7   STANVLPKITLGETAKPESATGAGNTFTQMLDSMSDTQSNAQTSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|218288293|ref|ZP_03492592.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius LAA1]
 gi|258511370|ref|YP_003184804.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|218241652|gb|EED08825.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius LAA1]
 gi|257478096|gb|ACV58415.1| flagellar hook-basal body complex protein FliE [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 98

 Score = 40.0 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 42  ALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAV 100
             L            +A+N+++    G   S  + +    QA   ++L      ++  A 
Sbjct: 31  DYLGKALDEVNQVAARADNLAVEYASGGPVSTADLMIAETQASLAVDLLSQTATRVQQAY 90

Query: 101 SEVSKMQI 108
           + +  MQI
Sbjct: 91  TTLMNMQI 98


>gi|213025208|ref|ZP_03339655.1| flagellar hook-basal body protein FliE [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 46

 Score = 39.6 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 23/37 (62%)

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 10  LNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 46


>gi|255022493|ref|ZP_05294479.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J1-208]
          Length = 98

 Score = 39.6 bits (91), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                             +          M          A+N     L  G+ +  + +
Sbjct: 7   NTASVLPKVTLGETAKTDNVTGAGNTFTQMLDSMSDTQSNAQNSVSKLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|16799795|ref|NP_470063.1| flagellar hook-basal body protein FliE [Listeria innocua Clip11262]
 gi|46906963|ref|YP_013352.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091675|ref|ZP_00229471.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|217965190|ref|YP_002350868.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes HCC23]
 gi|226223343|ref|YP_002757450.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes Clip81459]
 gi|254824008|ref|ZP_05229009.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J1-194]
 gi|254853084|ref|ZP_05242432.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           R2-503]
 gi|254932008|ref|ZP_05265367.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           HPB2262]
 gi|254993620|ref|ZP_05275810.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J2-064]
 gi|255521222|ref|ZP_05388459.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J1-175]
 gi|290894010|ref|ZP_06556985.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J2-071]
 gi|300764525|ref|ZP_07074518.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes FSL N1-017]
 gi|38503125|sp|Q92DU2|FLIE_LISIN RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|67460892|sp|Q722I5|FLIE_LISMF RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|16413172|emb|CAC95952.1| lin0720 [Listeria innocua Clip11262]
 gi|46880229|gb|AAT03529.1| putative flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019994|gb|EAL10731.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|217334460|gb|ACK40254.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes HCC23]
 gi|225875805|emb|CAS04508.1| Putative flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258606432|gb|EEW19040.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           R2-503]
 gi|290556456|gb|EFD89995.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J2-071]
 gi|293583559|gb|EFF95591.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           HPB2262]
 gi|293593235|gb|EFG00996.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J1-194]
 gi|300514879|gb|EFK41933.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes FSL N1-017]
 gi|307570251|emb|CAR83430.1| flagellar hook-basal body complex protein [Listeria monocytogenes
           L99]
 gi|313610107|gb|EFR85432.1| flagellar hook-basal body complex protein FliE [Listeria
           monocytogenes FSL F2-208]
 gi|313620041|gb|EFR91557.1| flagellar hook-basal body complex protein FliE [Listeria innocua
           FSL S4-378]
 gi|313624696|gb|EFR94653.1| flagellar hook-basal body complex protein FliE [Listeria innocua
           FSL J1-023]
 gi|328467277|gb|EGF38357.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           1816]
 gi|328475673|gb|EGF46422.1| flagellar hook-basal body protein FliE [Listeria monocytogenes 220]
 gi|332311136|gb|EGJ24231.1| Flagellar hook-basal body complex protein fliE [Listeria
           monocytogenes str. Scott A]
          Length = 98

 Score = 38.5 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                             +          M          A+      L  G+ +  + +
Sbjct: 7   NAASVLPKVTLGETAKTDNATGAGNTFTQMLDSMSDTQSNAQTSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|256370954|ref|YP_003108778.1| flagellar hook-basal body complex protein FliE [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007538|gb|ACU53105.1| flagellar hook-basal body complex protein FliE [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 98

 Score = 38.5 bits (88), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 29/74 (39%)

Query: 34  GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALR 93
                 F+ +L  +          A   +     G+ S+  A+    ++  T  L++ +R
Sbjct: 24  TQGASGFAQVLGSVIDQIQSTQATANTQAQGVASGQASISNAMVASTESLLTTELAVQVR 83

Query: 94  DKILSAVSEVSKMQ 107
           + ++ A+ +V   Q
Sbjct: 84  NGVVGAIDQVMSTQ 97


>gi|42526723|ref|NP_971821.1| flagellar hook-basal body protein FliE [Treponema denticola ATCC
           35405]
 gi|38502832|sp|O06679|FLIE_TREDE RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|2105147|gb|AAB57898.1| FliE [Treponema denticola]
 gi|41817038|gb|AAS11732.1| flagellar hook-basal body complex protein FliE [Treponema denticola
           ATCC 35405]
          Length = 121

 Score = 38.5 bits (88), Expect = 0.35,   Method: Composition-based stats.
 Identities = 6/74 (8%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLS 89
                  SF   +              + +    +       + +    + +A  +L L+
Sbjct: 44  AANKEAASFEQTILKAFDSMNAKQTNMDKLGEQMIVDPESVDVHDITMGMAEASLSLKLA 103

Query: 90  IALRDKILSAVSEV 103
             + D+++   +++
Sbjct: 104 QTIIDRLVKTWNDI 117


>gi|315281377|ref|ZP_07870014.1| flagellar hook-basal body complex protein FliE [Listeria marthii
           FSL S4-120]
 gi|313614974|gb|EFR88481.1| flagellar hook-basal body complex protein FliE [Listeria marthii
           FSL S4-120]
          Length = 98

 Score = 38.1 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                             +          M          A+N     L  G+ +  + +
Sbjct: 7   NAASVLPKVTLGETAKTDNAAGAGNTFTQMLDSMSDTQSNAQNSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|16802754|ref|NP_464239.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           EGD-e]
 gi|47095278|ref|ZP_00232889.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224498794|ref|ZP_03667143.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           Finland 1988]
 gi|224501983|ref|ZP_03670290.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           R2-561]
 gi|254830297|ref|ZP_05234952.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           10403S]
 gi|254900052|ref|ZP_05259976.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           J0161]
 gi|254911395|ref|ZP_05261407.1| flagellar hook-basal body complex protein fliE [Listeria
           monocytogenes J2818]
 gi|254935722|ref|ZP_05267419.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           F6900]
 gi|255025680|ref|ZP_05297666.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           J2-003]
 gi|255028427|ref|ZP_05300378.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           LO28]
 gi|284801042|ref|YP_003412907.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           08-5578]
 gi|284994184|ref|YP_003415952.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           08-5923]
 gi|38503112|sp|Q8Y930|FLIE_LISMO RecName: Full=Flagellar hook-basal body complex protein FliE
 gi|16410101|emb|CAC98790.1| lmo0712 [Listeria monocytogenes EGD-e]
 gi|47016349|gb|EAL07271.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258608306|gb|EEW20914.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           F6900]
 gi|284056604|gb|ADB67545.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           08-5578]
 gi|284059651|gb|ADB70590.1| flagellar hook-basal body protein FliE [Listeria monocytogenes
           08-5923]
 gi|293589333|gb|EFF97667.1| flagellar hook-basal body complex protein fliE [Listeria
           monocytogenes J2818]
          Length = 98

 Score = 38.1 bits (87), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                             +          M          A+      L  G+ +  + +
Sbjct: 7   NAASVLPKVTLGETAKTDNAAGAGNTFTQMLDSMSDTQSNAQTSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|325473785|gb|EGC76973.1| flagellar hook-basal body complex protein fliE [Treponema denticola
           F0402]
          Length = 121

 Score = 37.7 bits (86), Expect = 0.55,   Method: Composition-based stats.
 Identities = 6/74 (8%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 32  EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLS 89
                  SF   +              + +    +       + +    + +A  +L L+
Sbjct: 44  AANKEAASFEQTILKAFDSMNAKQTNMDKLGEQMIVDPESVDVHDITMGMAEASLSLKLA 103

Query: 90  IALRDKILSAVSEV 103
             + D+++   +++
Sbjct: 104 QTIIDRLVKTWNDI 117


>gi|167547436|gb|ABZ82495.1| tryptophan-rich antigen 74 [Plasmodium vivax]
          Length = 441

 Score = 37.7 bits (86), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 3/97 (3%)

Query: 10  NSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK 69
            +    T     R          GG +    S + +  A G       A   S A+ + K
Sbjct: 76  GAAKRATGGAAKRTTGGAAKRTTGGVAKSDASGVAKSDASGVAKSDASAVAKSDASGEAK 135

Query: 70  TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106
                        +  L  +    DK      E+  M
Sbjct: 136 RDTTGVPKRETAGQEKLQTNGQTNDK---TYEEIMNM 169


>gi|320175475|gb|EFW50574.1| Flagellar hook-basal body complex protein FliE [Shigella
          dysenteriae CDC 74-1112]
          Length = 87

 Score = 37.3 bits (85), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 6/86 (6%)

Query: 3  IEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVS 62
          +  IQG    IS      M      +  +      ISF+  L             A   +
Sbjct: 1  MSAIQGIEGVISQLQATAMSARAQDSLPQPT----ISFAGQLHAALDRISDTQTAARTQA 56

Query: 63 LAALQGK--TSMREAVDHIMQAERTL 86
               G+   ++ + +  + +A  ++
Sbjct: 57 ERFTLGEPGVALNDVMTDMQKASVSV 82


>gi|254829369|ref|ZP_05234056.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           N3-165]
 gi|258601783|gb|EEW15108.1| flagellar hook-basal body protein FliE [Listeria monocytogenes FSL
           N3-165]
          Length = 98

 Score = 36.9 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                             +          M          A+      L  G+ +  + +
Sbjct: 7   NAASVLPKVTLGETAKTDNAAGAGNTFTQMLDSMSDAQSNAQTSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|238483797|ref|XP_002373137.1| short-chain dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220701187|gb|EED57525.1| short-chain dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 584

 Score = 36.9 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 32/97 (32%), Gaps = 8/97 (8%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           I G  + ++   +I                +   F + L+      +  ++K    S++ 
Sbjct: 79  ISGIKASVNQMSSIRTWTAEATEKGTGIIPTTKDFKSALR-----VLEYLQK--YPSISM 131

Query: 66  LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSE 102
           L G +   +     ++ +      +   + + +A  +
Sbjct: 132 LTGTSPFPDV-IASVKTQLAFEDGLRAVNHLHTAHKD 167


>gi|169766988|ref|XP_001817965.1| short-chain dehydrogenase [Aspergillus oryzae RIB40]
 gi|83765820|dbj|BAE55963.1| unnamed protein product [Aspergillus oryzae]
          Length = 584

 Score = 36.5 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 32/97 (32%), Gaps = 8/97 (8%)

Query: 6   IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
           I G  + ++   +I                +   F + L+      +  ++K    S++ 
Sbjct: 79  ISGIKASVNQMSSIRTWTAEATEKGTGIIPTTKDFKSALR-----VLEYLQK--YPSISM 131

Query: 66  LQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSE 102
           L G +   +     ++ +      +   + + +A  +
Sbjct: 132 LTGTSPFPDV-IASVKTQLAFEDGLRAVNHLHTAHKD 167


>gi|257061799|ref|YP_003139687.1| methyl-accepting chemotaxis sensory transducer with GAF sensor
            [Cyanothece sp. PCC 8802]
 gi|256591965|gb|ACV02852.1| methyl-accepting chemotaxis sensory transducer with GAF sensor
            [Cyanothece sp. PCC 8802]
          Length = 1781

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/91 (7%), Positives = 29/91 (31%)

Query: 9    TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
             ++       +         +  +  ++    +   Q   +     + K + +  A    
Sbjct: 1495 IDALREIVTQVQKAAKQVVETTGDSTTAIEGLATQAQQQFEELNQALAKIQEMVKATEST 1554

Query: 69   KTSMREAVDHIMQAERTLNLSIALRDKILSA 99
              + ++    + +A +TL +     +K + +
Sbjct: 1555 TENAQQVGMAVEKANQTLQVGDRAMNKTVDS 1585


>gi|218248741|ref|YP_002374112.1| GAF sensor-containing methyl-accepting chemotaxis sensory transducer
            [Cyanothece sp. PCC 8801]
 gi|218169219|gb|ACK67956.1| methyl-accepting chemotaxis sensory transducer with GAF sensor
            [Cyanothece sp. PCC 8801]
          Length = 1781

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/91 (7%), Positives = 29/91 (31%)

Query: 9    TNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG 68
             ++       +         +  +  ++    +   Q   +     + K + +  A    
Sbjct: 1495 IDALREIVTQVQKAAKQVVETTGDSTTAIEGLATQAQQQFEELNQALAKIQEMVKATEST 1554

Query: 69   KTSMREAVDHIMQAERTLNLSIALRDKILSA 99
              + ++    + +A +TL +     +K + +
Sbjct: 1555 TENAQQVGMAVEKANQTLQVGDRAMNKTVDS 1585


>gi|313634362|gb|EFS00959.1| flagellar hook-basal body complex protein FliE [Listeria seeligeri
           FSL N1-067]
          Length = 98

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                      S      +          M          A+N     L  G+ +  + +
Sbjct: 7   NTASVMPKVTLSETAKTDNVAGAGNTFTQMLDSMSDVQSNAQNSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|253681648|ref|ZP_04862445.1| methyl-accepting chemotaxis protein [Clostridium botulinum D str.
           1873]
 gi|253561360|gb|EES90812.1| methyl-accepting chemotaxis protein [Clostridium botulinum D str.
           1873]
          Length = 700

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 4   EQIQGTNSFISHTDTIGMRYD----FTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE 59
           + ++  N+ I+  DT+  + +             G S  SF+ ++ +  +      + + 
Sbjct: 506 DNVKQINNIINLIDTVAEQTNLLALNAAIEASRAGESGKSFA-VVAEEIRKLSEQSKNSA 564

Query: 60  NVSLAALQGKTSMREAVD-HIMQAERTLNLSIALRDKILSAVSEVSKM 106
                 L   ++  + +                + +K ++A   +  M
Sbjct: 565 KDINTILNNISNSTDIIVNDTNTINNEFKTQADIINKSITAFKNIIHM 612


>gi|242241690|ref|ZP_04796135.1| flagellar hook-basal body complex protein [Staphylococcus
          epidermidis W23144]
 gi|242234858|gb|EES37169.1| flagellar hook-basal body complex protein [Staphylococcus
          epidermidis W23144]
          Length = 78

 Score = 35.8 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 6  IQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAA 65
          IQG    IS      M     ++  +      ISF+  L             A   +   
Sbjct: 1  IQGIEGVISQLQATAMSARAQESLPQPT----ISFAGQLHAALDRISDTQTAARTQAEKF 56

Query: 66 LQGK--TSMREAVDHIMQAERT 85
            G+   ++ + +  + +A  +
Sbjct: 57 TLGEPGVALNDVMTDMQKASVS 78


>gi|320182749|gb|EFW57633.1| Flagellar hook-basal body complex protein FliE [Shigella boydii
           ATCC 9905]
          Length = 39

 Score = 35.8 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 23/37 (62%)

Query: 72  MREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
           + + +  + +A  ++ + I +R+K+++A  EV  MQ+
Sbjct: 3   LNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV 39


>gi|315301964|ref|ZP_07872960.1| flagellar hook-basal body complex protein FliE [Listeria ivanovii
           FSL F6-596]
 gi|313629671|gb|EFR97808.1| flagellar hook-basal body complex protein FliE [Listeria ivanovii
           FSL F6-596]
          Length = 98

 Score = 35.4 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                      S      +          M          A+N     L  G+ +  + +
Sbjct: 7   NTASVMPKVTLSETAKTDNAAGAGNTFTQMLDSMSDVQSNAQNSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|205373371|ref|ZP_03226175.1| flagellar hook-basal body complex protein [Bacillus coahuilensis
           m4-4]
          Length = 34

 Score = 35.4 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 75  AVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            +    +A   L  ++ +R+K++ A  E+ +MQ+
Sbjct: 1   MMVASQKATIALQTTVEVRNKVVEAYQEIMRMQM 34


>gi|289433990|ref|YP_003463862.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170234|emb|CBH26774.1| flagellar hook-basal body complex protein FliE, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 98

 Score = 35.0 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 18  TIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQ-GKTSMREAV 76
                      +      +          M          A+N     L  G+ +  + +
Sbjct: 7   NTASVMPKVTLAETAKTDNAAGAGNTFTQMLDSMSDVQSNAQNSVSNLLTTGEGNASDVL 66

Query: 77  DHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
             + +AE  +  +  +RD ++ +  ++  MQ+
Sbjct: 67  IQMKKAESEMKTAAVIRDNVIESYKQLLNMQV 98


>gi|4033608|dbj|BAA35136.1| B2HC [Anthocidaris crassispina]
          Length = 1169

 Score = 35.0 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 44  LQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           LQ  A       ++ E +    +     + E +  I +    +  +    +KI+ A  EV
Sbjct: 445 LQSAASQVSTMQKELEELQPQLVVASKEVDEIMVVIEKESVEVAKT----EKIVKADEEV 500

Query: 104 SKMQ 107
           +  Q
Sbjct: 501 ANKQ 504


>gi|320547231|ref|ZP_08041524.1| SMC family domain protein [Streptococcus equinus ATCC 9812]
 gi|320448119|gb|EFW88869.1| SMC family domain protein [Streptococcus equinus ATCC 9812]
          Length = 1179

 Score = 34.2 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 35  SSPISFSALLQDMAKGAIGDMEKAENVSLAALQGKTSMREAVDHIMQAERTLNLSIALRD 94
                 S  L           + +E+ S    Q K ++ E  ++  QA  T   +     
Sbjct: 390 QKEADLSNRLTMTIADIDNQKQLSESKSEELAQTKANLAELKENAKQALDTFEATRGKVK 449

Query: 95  KILSAVSEV 103
           ++L A  E+
Sbjct: 450 ELLDAYQEL 458


>gi|157694340|ref|YP_001488802.1| sensor histidine kinase [Bacillus pumilus SAFR-032]
 gi|157683098|gb|ABV64242.1| possible sensor histidine kinase [Bacillus pumilus SAFR-032]
          Length = 504

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 6/108 (5%)

Query: 2   MIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAE-N 60
           M+  I    +          +     N  +       + S L++++A         A   
Sbjct: 357 MVSGISSVTNQAQELAVAQEQSTSAANLAKNSADETKNISDLIKEVANQTNLLGLNAAIE 416

Query: 61  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108
            + A  QG+     +V      +  L+ + A  +  + +     K QI
Sbjct: 417 AARAGEQGRGF---SVVADEVRKLALHSANATEN--IESSLTDMKTQI 459


>gi|260599466|ref|YP_003212037.1| methyl-accepting chemotaxis protein II [Cronobacter turicensis
           z3032]
 gi|260218643|emb|CBA33957.1| Methyl-accepting chemotaxis protein II [Cronobacter turicensis
           z3032]
          Length = 651

 Score = 33.8 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 30/102 (29%), Gaps = 1/102 (0%)

Query: 3   IEQIQGTNSFISHT-DTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I+ I G  + +    + +        +      S     S  +   A          E +
Sbjct: 385 IDAINGIGNGLQQIVNQVRDAAGDISHGTRALASDSGEISEQINKQASSVEETSASMEQL 444

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           +    Q   +M +    + +A   +          ++ ++++
Sbjct: 445 AATVSQNAANMEQTQSLVKEASDAVQHGGETVSNAVTTMNDI 486


>gi|156932416|ref|YP_001436332.1| hypothetical protein ESA_00195 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530670|gb|ABU75496.1| hypothetical protein ESA_00195 [Cronobacter sakazakii ATCC BAA-894]
          Length = 643

 Score = 33.5 bits (75), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 30/102 (29%), Gaps = 1/102 (0%)

Query: 3   IEQIQGTNSFISHTDT-IGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAENV 61
           I+ I G  + +    T +        +      S     S  +   A          E +
Sbjct: 377 IDAINGIGNGLQQIVTQVRDAAGDISHGTRALASDSGEISEQINKQASSVEETSASMEQL 436

Query: 62  SLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEV 103
           +    Q   +M +    + +A   +          ++ ++++
Sbjct: 437 AATVSQNAANMEQTQSLVKEASDAVQHGGETVSNAVTTMNDI 478


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.309    0.138    0.347 

Lambda     K      H
   0.267   0.0419    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 652,696,128
Number of Sequences: 14124377
Number of extensions: 14527225
Number of successful extensions: 76560
Number of sequences better than 10.0: 1420
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 275
Number of HSP's that attempted gapping in prelim test: 74515
Number of HSP's gapped (non-prelim): 1673
length of query: 108
length of database: 4,842,793,630
effective HSP length: 76
effective length of query: 32
effective length of database: 3,769,340,978
effective search space: 120618911296
effective search space used: 120618911296
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 76 (33.9 bits)