HHsearch alignment for GI: 254780380 and conserved domain: PRK08147
>PRK08147 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.73 E-value=1.7e-08 Score=63.35 Aligned_cols=58 Identities=28% Similarity=0.366 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC-------CCCCCCEECC
Q ss_conf 7888852156899999998988875312555566754332011000123432210-------4754210002
Q gi|254780380|r 4 LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGVRVKKIGV 68 (134)
Q Consensus 4 l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~~-------~gv~~~~i~~ 68 (134)
T Consensus 1 lss~l~ia~sgL~a~Q~al~vt~~NIaNanT~G-------YsRq~v~~~~~~~~~~~~g~~G~GV~v~~I~R 65 (547)
T PRK08147 1 MSSLINTAMSGLNAAQAALNTVSNNISNYNVAG-------YTRQTTILAQAGSTLTAGGWIGNGVYVSGVQR 65 (547)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCEEEEECCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 961899999999999999999977563389998-------06305775224665567874257879806988