HHsearch alignment for GI: 254780380 and conserved domain: PRK08871
>PRK08871 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.70 E-value=8.8e-08 Score=59.61 Aligned_cols=57 Identities=19% Similarity=0.315 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH---H----CCCCCCCEECC
Q ss_conf 8888521568999999989888753125555667543320110001234322---1----04754210002
Q gi|254780380|r 5 IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G----SGGVRVKKIGV 68 (134)
Q Consensus 5 ~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~---~----~~gv~~~~i~~ 68 (134)
T Consensus 3 s~ll~ig~sgL~a~Q~al~vtg~NIANanT~G-------YsRq~v~~~~~~~~~~~~~~~G~GV~v~~I~R 66 (626)
T PRK08871 3 SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEG-------YSRQSVIQGTNDPRQFGGSTYGMGVHVENVRR 66 (626)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 67899999999999999998747665169988-------05105654045762347872036789837998