HHsearch alignment for GI: 254780380 and conserved domain: PRK12621

>PRK12621 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=99.59  E-value=1.7e-14  Score=94.28  Aligned_cols=122  Identities=24%  Similarity=0.347  Sum_probs=87.6

Q ss_pred             CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE--ECCCCCCCCCCC
Q ss_conf             90478-888521568999999989888753125555667543320110001234322104754210--002654310001
Q gi|254780380|r    1 MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--IGVDQSTFVEEF   77 (134)
Q Consensus         1 m~~l~-~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~~~gv~~~~--i~~~~~~~~~~y   77 (134)
T Consensus         1 m~~~f~~~i~ll~~aLd~~~~Rq~via~NIANadTPg-------YKardv~Fe~~L~~a~~~~~~~~l~~T~~~Hi~~~~   73 (136)
T PRK12621          1 MKSLYEPHVNLVGKVMDMQLQRQNVVMSNIANVRTPG-------YKPRELEFEKQLQSALGLDAKGRMTRTEENHLPAVF   73 (136)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             9324787999999999999999999997132058999-------874418789999998761447864557713157888


Q ss_pred             CCC----------CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             432----------11125023333056109999999999999999999999999999999999646
Q gi|254780380|r   78 DPG----------HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        78 ~P~----------~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
T Consensus        74 ~~~~~~~~~~~~~~~~~~~dg----N~Vdid~Em~~la~N~l~Y~a~~~~l~~~~~~l~~aI~~Gr  135 (136)
T PRK12621         74 DPEGFGPEWSKAFKPRVVHGE----DRVNLDKEMAKMAKNSLQYNALTTVIKGNFEGVKNIIMEGQ  135 (136)
T ss_pred             CCCCCCCCEEECCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             977677540104787646899----87654899999999999999999999999999999998348