HHsearch alignment for GI: 254780380 and conserved domain: PRK12643
>PRK12643 flgF flagellar basal body rod protein FlgF; Reviewed.
Probab=98.51 E-value=9.3e-08 Score=59.49 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 788885215689999999898887531255556675433201100012343
Q gi|254780380|r 4 LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54 (134)
Q Consensus 4 l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~ 54 (134)
T Consensus 1 Mdr~iYtA~sg~~~~~~~~~viaNNLANvnT~G-------FK~~~~~~~~~ 44 (209)
T PRK12643 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPG-------FRAQLAAMRAV 44 (209)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-------HCCCHHHHHCC
T ss_conf 926899999999999998889988877478764-------43104534231