HHsearch alignment for GI: 254780380 and conserved domain: PRK12782

>PRK12782 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=100.00  E-value=0  Score=299.34  Aligned_cols=134  Identities=57%  Similarity=0.898  Sum_probs=128.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH---HCCCCCCCEECCCCCCCCCCC
Q ss_conf             90478888521568999999989888753125555667543320110001234322---104754210002654310001
Q gi|254780380|r    1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVDQSTFVEEF   77 (134)
Q Consensus         1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~---~~~gv~~~~i~~~~~~~~~~y   77 (134)
T Consensus         2 ~~~L~~~~~Ia~sgm~Aq~~Rl~~iAsNlANa~st~~~~~~~py~~k~v~f~~~~~~~~~~~gV~v~~i~~d~~p~~~~Y   81 (138)
T PRK12782          2 IDPLQASLRIASSGLEAQSTRLRVVSENLANAQSTGRTPGADPYQRKTVTFRAELDRAAGAALVRVKEIGVDTAPFRVEY   81 (138)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf             70789999999999999999999999877424667879888764013223413103446777413413343898642344


Q ss_pred             CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             432111250233330561099999999999999999999999999999999996469
Q gi|254780380|r   78 DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD  134 (134)
Q Consensus        78 ~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r~  134 (134)
T Consensus        82 dP~hP~Ad~~GyV~~pnVn~~~EMvdm~~AsRsYeANv~v~~tak~m~~~tL~i~rs  138 (138)
T PRK12782         82 DPGNPAADENGYVKLPNVNMLIEMADMREANRSYEANLQVIKQARAMVSMTIDLLRS  138 (138)
T ss_pred             CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999876788546898889999999999999999999999999999999998509