HHsearch alignment for GI: 254780380 and conserved domain: PRK12804

>PRK12804 flagellin; Provisional.
Probab=94.03  E-value=0.16  Score=27.24  Aligned_cols=42  Identities=24%  Similarity=0.328  Sum_probs=39.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             056109999999999999999999999999999999999646
Q gi|254780380|r   92 YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        92 ~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
T Consensus       266 i~DaD~A~e~~~l~~~qi~~Qaa~a~laqAN~~~q~~L~Ll~  307 (307)
T PRK12804        266 IRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR  307 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             560069999999999999999999999998266899998519