HHsearch alignment of GI: 254780380 and MMDB domain: 1ucu_A_1-40_455-494
>1ucu_A (A:1-40,A:455-494) Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium}
Probab=93.37 E-value=0.13 Score=27.36 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 056109999999999999999999999999999999999646
Q gi|254780380|r 92 YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133 (134)
Q Consensus 92 ~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r 133 (134)
..++|.+.||+++...+-..++...++..+.++-+..|.|+|
T Consensus 39 sADaD~A~E~~~~tk~qIL~Qa~~amLaQAN~~pq~vl~LLq 80 (80)
T 1ucu_A 39 SADSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 80 (80)
T ss_dssp TSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
T ss_conf 821319999999999999999999999997416789998409